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Conserved domains on  [gi|1382723812|gb|PUZ10828|]
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fimbria A protein [Cronobacter sakazakii]

Protein Classification

fimbrial protein( domain architecture ID 10007530)

fimbrial protein similar to Escherichia coli fimbrial adapter PapF, which is required for the correct presentation of the PapG adhesin at the distal end of the tip fibrillum

Gene Ontology:  GO:0009289|GO:0007155
PubMed:  1670938|22411982|2890081

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
22-177 9.65e-40

Pilin (type 1 fimbrial protein) [Cell motility];


:

Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 132.86  E-value: 9.65e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  22 NAQDQGHGKVTFTGSIIDAPCSIHPDSIDQTVGMGQISNVALKANGNTGTSVPrnFEIKLENCDVSTLKTVKTTFTGAEG 101
Cdd:COG3539    17 AAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKP--FSIKLTNCDAGTSNSVKVTFTGTAD 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812 102 ATDGSL---GITGTAKGASIILTNGDGQQLKLGEASAAHQLQ-EGNNTLLFSAYLQGDGASATivPGDFTAVADFTLAYQ 177
Cdd:COG3539    95 SANPGLlanTGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTsNGSATLPFYARYVATGATVT--AGSFNATATFTIDYQ 172
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
22-177 9.65e-40

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 132.86  E-value: 9.65e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  22 NAQDQGHGKVTFTGSIIDAPCSIHPDSIDQTVGMGQISNVALKANGNTGTSVPrnFEIKLENCDVSTLKTVKTTFTGAEG 101
Cdd:COG3539    17 AAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKP--FSIKLTNCDAGTSNSVKVTFTGTAD 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812 102 ATDGSL---GITGTAKGASIILTNGDGQQLKLGEASAAHQLQ-EGNNTLLFSAYLQGDGASATivPGDFTAVADFTLAYQ 177
Cdd:COG3539    95 SANPGLlanTGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTsNGSATLPFYARYVATGATVT--AGSFNATATFTIDYQ 172
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 23-177 5.35e-22

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 87.33  E-value: 5.35e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  23 AQDQGHGKVTFTGSIIDAPCSIHPDSIDQTVGMGQISNVALKANGNTGTSVPrnFEIKLENCDVSTLKTVKTTFTGAeGA 102
Cdd:PRK15209   20 AAESGDGTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKP--FQIKLEDCDITTNKKVNVSFNGV-GD 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812 103 TDGSLGIT-----GTAKGASIILTNGDGQQLKLGEASAAHQLQEGNNTLLFSA-YLqgdGASATIVPGDFTAVADFTLAY 176
Cdd:PRK15209   97 ADDSTLVSvsteaGAATGVGIGIYDNANTLVELNTGKSTTTLAAGQTVLYFTAnYV---STKDTVTTGYGNAEVDFNLSY 173


                  .
gi 1382723812 177 Q 177
Cdd:PRK15209  174 E 174
Fimbrial pfam00419
Fimbrial protein;
31-177 8.93e-08

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 48.97  E-value: 8.93e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  31 VTFTGSI--IDAPCSIHPDSIDqTVGMGQISNVALKANGNTGTSVPrnFEIKLENCDVSTLKTVKTTFTGAEGATDGSLG 108
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQKP--FSITLECSSGSSAVKVTVGLFGTADASSPNLL 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1382723812 109 ITGTAKGAS----IILTNGDGQQLKLGEASA-----AHQLQEGNNTllFSAYLQGDGAsATIVPGDFTAVADFTLAYQ 177
Cdd:pfam00419  78 LTGNGAGAAtgvgIRLYDANGGALPPNNGTSsipvsATAAVATGIT--FTASLVATTG-GTPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
22-177 9.65e-40

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 132.86  E-value: 9.65e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  22 NAQDQGHGKVTFTGSIIDAPCSIHPDSIDQTVGMGQISNVALKANGNTGTSVPrnFEIKLENCDVSTLKTVKTTFTGAEG 101
Cdd:COG3539    17 AAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKP--FSIKLTNCDAGTSNSVKVTFTGTAD 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812 102 ATDGSL---GITGTAKGASIILTNGDGQQLKLGEASAAHQLQ-EGNNTLLFSAYLQGDGASATivPGDFTAVADFTLAYQ 177
Cdd:COG3539    95 SANPGLlanTGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTsNGSATLPFYARYVATGATVT--AGSFNATATFTIDYQ 172
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 23-177 5.35e-22

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 87.33  E-value: 5.35e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  23 AQDQGHGKVTFTGSIIDAPCSIHPDSIDQTVGMGQISNVALKANGNTGTSVPrnFEIKLENCDVSTLKTVKTTFTGAeGA 102
Cdd:PRK15209   20 AAESGDGTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKP--FQIKLEDCDITTNKKVNVSFNGV-GD 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812 103 TDGSLGIT-----GTAKGASIILTNGDGQQLKLGEASAAHQLQEGNNTLLFSA-YLqgdGASATIVPGDFTAVADFTLAY 176
Cdd:PRK15209   97 ADDSTLVSvsteaGAATGVGIGIYDNANTLVELNTGKSTTTLAAGQTVLYFTAnYV---STKDTVTTGYGNAEVDFNLSY 173


                  .
gi 1382723812 177 Q 177
Cdd:PRK15209  174 E 174
PRK09733 PRK09733
fimbrial-like protein;
25-177 1.02e-19

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 81.53  E-value: 1.02e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  25 DQGHGKVTFTGSIIDAPCSIHPDSIDQTVGMGQISNVALKANGNtgtSVPRNFEIKLENCDVS----TLKTVKTTFTGAE 100
Cdd:PRK09733   22 DEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQK---SLAEPFTIHLQDCMLSqggtTYSKAKVTFTTAN 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812 101 -GATDGSL------GITGTAKGASIILTNGDGQQLKLGEA-----SAAHQLQEGNntllFSAYLQGDGASATivPGDFTA 168
Cdd:PRK09733   99 tMTGQSDLlkntkeTEIGGATGVGVRILDSQSGEVTLGTPvvitfNNTNSYQELN----FKARMESPSKDAT--PGNVYA 172


                  ....*....
gi 1382723812 169 VADFTLAYQ 177
Cdd:PRK09733  173 QADYKIAYE 181
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
29-177 9.90e-18

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 76.53  E-value: 9.90e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  29 GKVTFTGSIIDAPCSIHPDSIDQTVGMGQISNVALKANGNTGTSVPrnFEIKLENCDVSTLKTVKTTFTGAEGATDGSL- 107
Cdd:PRK15194   33 GTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIP--FTIQLNDCDPVVAATAAVAFSGQADATNDNLl 110

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1382723812 108 -----GITGTAKGASIILTNGDGQQLKLGEA--SAAHQLQEGNNTLLFSAYLQGDGASATivPGDFTAVADFTLAYQ 177
Cdd:PRK15194  111 avassTNTTTATGVGIEILDNTSSILKPDGAtfSANQNLIEGTNTLHFSARYKATGTSAS--AGQANADATFIMKYE 185
PRK15210 PRK15210
fimbrial protein;
27-176 2.57e-17

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 75.50  E-value: 2.57e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  27 GHGKVTFTGSIIDAPCSIHPDSIDQTVGMGQISNVALKANGNTGTSVPrnFEIKLENC-----------DVSTLKTVKTT 95
Cdd:PRK15210   33 GSGKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTADATTESKP--FTIHLQNCafdpnipdtagSAGKMSKVTVS 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  96 FTGAEGATDGSLGITGTAKGASIILTNGDGQQLKLGEASA----AHQLQEGNNTLLFSAYLQGDGASATivPGDFTAVAD 171
Cdd:PRK15210  111 FSGTANTSKKAYTTSGSAQHVGVQLLKSDNTSIIEPNTPMpdgdAQQLQAGNNELNFFARLIALDNGVT--PGDFNASVT 188


                  ....*
gi 1382723812 172 FTLAY 176
Cdd:PRK15210  189 YTLKY 193
PRK15283 PRK15283
fimbrial major subunit StfA;
22-176 2.80e-16

fimbrial major subunit StfA;


Pssm-ID: 185183  Cd Length: 186  Bit Score: 72.49  E-value: 2.80e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  22 NAQDQGHGKVTFTGSIIDAPCSIHPDSIDQTVGMGQISNVALKAnGNTGTSVprNFEIKLENCDVSTLKTVKTTFTG--- 98
Cdd:PRK15283   22 NAAGSNTGTVTFTGTIEDSPCSIVVGDEHQTVNLGHIGTGSLMG-GKESSKV--DFHIGLENCAFTTEKEASTVFSAign 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  99 AEGATDGSLGIT----GTAKGASIILTNGDGQQLKLGEASAAHQLQEGN-----NTLLFSAYLQGDGASATIVPGDFTAV 169
Cdd:PRK15283   99 ESSANPGSVALMriggGEMAGSSIVIGNHLGSAIKLGDAYSENLTMNGSvaaakQTLNFKAWVKGDSAASTIDTGEFSST 178


                  ....*..
gi 1382723812 170 ADFTLAY 176
Cdd:PRK15283  179 VNFTISY 185
PRK15261 PRK15261
fimbrial protein SteA; Provisional
 29-176 8.35e-16

fimbrial protein SteA; Provisional


Pssm-ID: 185169  Cd Length: 195  Bit Score: 71.35  E-value: 8.35e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  29 GKVTFTGSIIDAPCSIHPDSIDQTVGMGQISNVALKANGNTGTSVPRNFEIKLENCDVSTLKTVKTTF------TGAEGA 102
Cdd:PRK15261   31 AKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFttgsgtTAATGA 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812 103 TD--GSLGITGTAKGASIILTNGDG--QQLKLGEASAAHQLQEGNNTLL-------FSAYLQGdGASATIVPGDFTAVAD 171
Cdd:PRK15261  111 TDnlALMKTDGTGAISNVSLAIGDAgkNNIKLGDTYTQAIADLDGDTILdekqslnFTAWLVG-AATGTVGTGEFSSAAN 189


                  ....*
gi 1382723812 172 FTLAY 176
Cdd:PRK15261  190 VTISY 194
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 29-176 1.91e-14

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 67.54  E-value: 1.91e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  29 GKVTFTGSIIDAPCSIHPDSIDQTVGMGQISNVALKANGNTGTSvPRNFEIKLENCDVSTLKTVKTTFTGAEGATD-GSL 107
Cdd:PRK15187   32 GTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTEAGMVANQ-KEDFTIKLEDCDTQTSQNAAVIFNGQQDANQpGSL 110

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1382723812 108 GIT---GTAKGASIILTNGDGQQLKLGEASAAHQLQEGNNTLLFSAYLQGDGASATivpGDFTAVADFTLAY 176
Cdd:PRK15187  111 ANTagaGSATNVALQLYGPDGQALNIGESSSTVTLNDGENVIPLSVDYIATGTATA---GNVTATATFSMVY 179
lpfA PRK15289
fimbrial protein; Provisional
 29-177 1.54e-12

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 62.67  E-value: 1.54e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  29 GKVTFTGSIIDAPCSIHPDSIDQTVGMGQISNVALKANGNTGTsvPRNFEIKLENCDvSTLKTVKTTFTGAEGA-TDGSL 107
Cdd:PRK15289   26 GVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLAS--PQKFSIKLENCP-ATYTQAAVRFDGTEAPgGDGDL 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812 108 GI------------TG-----TAKGASIILTN-GDGQQLKLGEASAAHQLQ-EGNNTLLFSA-YLQGDgasATIVPGDFT 167
Cdd:PRK15289  103 KVgtpltagnpgdfTGtgqaiAATGVGIRIFNqSDNSQVKLYNDSAYTAIDaEGKAEMKFIArYVATN---ATVTAGTAN 179

                         170
                  ....*....|
gi 1382723812 168 AVADFTLAYQ 177
Cdd:PRK15289  180 ADSQFTVEYK 189
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 29-177 2.98e-08

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 50.87  E-value: 2.98e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  29 GKVTFTGSIIDAPCSIHPDSIDQTVGMGQISNVALKANGNtgTSVPRNFEIKLENCDvSTLKTVKTTFTGAEGATDGSL- 107
Cdd:PRK15191   23 GRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRAGD--GSAWQPFAIDLQNCG-STASGVTVSFSGAADSRNTDLl 99

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1382723812 108 ---GITGTAKGASIILTNGDGQQLKLGEASAAHQLQEGNNTLLFSAYLQGDGASATIVPGDFTAVADFTLAYQ 177
Cdd:PRK15191  100 altAGESDASGIGIALYDQNKTLIPLGQESDVVTLSPGQASAHLQFYARYLADGGAVTPGDANASATFILAYE 172
Fimbrial pfam00419
Fimbrial protein;
31-177 8.93e-08

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 48.97  E-value: 8.93e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  31 VTFTGSI--IDAPCSIHPDSIDqTVGMGQISNVALKANGNTGTSVPrnFEIKLENCDVSTLKTVKTTFTGAEGATDGSLG 108
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQKP--FSITLECSSGSSAVKVTVGLFGTADASSPNLL 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1382723812 109 ITGTAKGAS----IILTNGDGQQLKLGEASA-----AHQLQEGNNTllFSAYLQGDGAsATIVPGDFTAVADFTLAYQ 177
Cdd:pfam00419  78 LTGNGAGAAtgvgIRLYDANGGALPPNNGTSsipvsATAAVATGIT--FTASLVATTG-GTPTAGDFNATATIVVDYQ 152
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 33-177 1.29e-07

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 49.31  E-value: 1.29e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  33 FTGSIIDAPCSIHPDSIDQTVGMGQISNVALKANGNTGTSVPrnFEIKLENCDvSTLKTVKTTFTGAEGATDGS-LGITG 111
Cdd:PRK15190   32 FTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKFKP--FNINLKNCS-RGIAGAKIWFTGEPDPDNPAlLAITD 108

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1382723812 112 TAKGASIILTNGDGQQLKLGEA---------SAAHQLQEGNNTLLFsaYLQGDGASATIVPGDFTAVADFTLAYQ 177
Cdd:PRK15190  109 TGMGSGNMLASGVGVEILNDDQdtisinnadSVVYPLKAGRNTLSF--YIRYKSTRPTVTSGNATAVMYFDMQYE 181
PRK09934 PRK09934
fimbriae assembly protein;
14-176 1.59e-07

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 48.73  E-value: 1.59e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  14 LMLAAGMANAQDQGHGKVTFTGSIIDAPCSIHPDSIDQTVGMGQISNVALKANGNTGTSVPrnFEIKLENCDVStlkTVK 93
Cdd:PRK09934   12 LLWSPLSWAADPLGEINIELHGNVVDFTCTVNTADSDKTVDLGTWPTKQLLNAGDTTQPVP--FSLKLEGCPPG---SAS 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  94 TTFTGAEGATDGSLGI--TGTAKGASIILTNGDGQQLKLGEASAAHQLQE-GNNTLLFSA-YLqgdgASATIV-PGDFTA 168
Cdd:PRK09934   87 ITFTGTPASDTNLLALddPAMAQTVAIEIRDSDRSRLALGQASPTVEVDAnGNATLNFYAnYI----ALADGVqPGVAKA 162


                  ....*...
gi 1382723812 169 VADFTLAY 176
Cdd:PRK09934  163 DATFMINY 170
PRK15260 PRK15260
fimbrial protein SteF; Provisional
 31-177 1.94e-06

fimbrial protein SteF; Provisional


Pssm-ID: 185168  Cd Length: 178  Bit Score: 45.84  E-value: 1.94e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  31 VTFTGSIIDAPCSIHPDS-IDQTVGMGQISNVALKANGNTgTSVPrnFEIKLENCDVSTLKTVKTTFTGAEGAT-DGSLG 108
Cdd:PRK15260   31 VHYSGKLVAGACNLVVDNdTMATVDFHTIGSDNFDASGQT-TPVP--FTLSLQDCKTALANGVLVTFQGVEDSTlPGLLA 107

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1382723812 109 I--TGTAKGASIILTNGDGQQLKLGEA-SAAHQLQEGNNTLLFSAYLQgDGASATIVPGDFTAVADFTLAYQ 177
Cdd:PRK15260  108 LepSSEASGFAIGVETAAQQPVSINATvGTAFVLKEGITTINLQARLQ-KYAGEEVMPGEFSGSATVSFEYQ 178
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
29-176 6.76e-06

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 44.08  E-value: 6.76e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  29 GKVTFTGSIIDAPCSIHPDSIDQTVGMGQISNVALKANGNTGT-SVPrnFEIKLENCDVSTLKTVKTTFTGAEGATDGS- 106
Cdd:PRK15200   27 GRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPvSVP--FSLRLISCSAEVWRHVGIAFAGVTPAEDPHv 104

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1382723812 107 -LGITGTAKGASIILTNGDGQQLKLGEASAAHQ---LQEGNNTLLFSAYLQgdGASATIVPGDFTAVADFTLAY 176
Cdd:PRK15200  105 fLASGEGIGNAGIGLALFDDQQRQIIPNTLPLHyapILTSEMTLHFTARYR--AISENMTPGRIHSEVWFTLVY 176
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 29-177 5.07e-05

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 41.76  E-value: 5.07e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  29 GKVTFTGSIIDAPCSIHPDSIDqtVGMGQisnVALKANGNTGTSV-PRNFEIKLENCDVSTLKTVktTFTGAEGATDGSL 107
Cdd:PRK15205   30 GDIHFTITIKAKACELEKDSLE--VDMGT---MVLQKPVKVGTELnQKNFSIGLKDCDGISKASV--TMDGSPDPDDPSL 102

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1382723812 108 ------GITGTAKGasiILTNGDGQQLKLGEASAAHQLQ---EGNNTLLFSAYLQGDGASATIvpGDFTAVADFTLAYQ 177
Cdd:PRK15205  103 faldagGATGVALK---IKTSKGTQQYPKSTDGTPVEWAingDGTTQLNYIASYVPVNADATV--GTANATVNFSVTYE 176
PRK15296 PRK15296
fimbrial protein SthA;
31-177 9.21e-05

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 41.23  E-value: 9.21e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  31 VTFTGSIIDAPCSIHPD-SIDQTVGMGQISNVALKANGNTGTSVPrnFEIKLENCDVSTLKTVKTTFTGAEGATDGS--- 106
Cdd:PRK15296   26 ITFNGKIYDQACTVQVNgSTDTTIDLGNYSKERIAEKGATTDYVP--FTVSLVSCPEAGTGVPTQAMFRFHGATDDSnpt 103

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1382723812 107 ------LGITGTAKGASIILTNGDGQQLKLGEASAAHQL--QEGNNTLLFSAYLQGDGaSATIVPGDFTAVADFTLAYQ 177
Cdd:PRK15296  104 yfknadEGSETGAAGVGISIQNASHSDVTDNTDDAAVNLptDGSTADFTYYAAMANDG-SATVTGGDVSTQVTYTVSYQ 181
PRK15307 PRK15307
major fimbrial protein StkA; Provisional
 1-177 1.53e-04

major fimbrial protein StkA; Provisional


Pssm-ID: 185207  Cd Length: 201  Bit Score: 40.80  E-value: 1.53e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812   1 MKFSKVSLAAAMGLMLAAGMANAQDQGHGKVTFTGSIIDAPCSIHPDS--------IDQTVGMGQISNVALKANGNTGTS 72
Cdd:PRK15307    1 MFLKKYGLAAAVAMTLSASSAMAADPDTGTITFHGLVTNNTCNISLDNkidqdgndFDITLPTVFVKDFATALGVNSTLG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  73 vPRNFEIKLENCDVSTLKTVKTTFTG-------AEGATDGSLGITGTAKGASIILTN---GDGQQLKLGEASAAHQ---L 139
Cdd:PRK15307   81 -EKQFTLNLSECDNATLKDASAQFNSwggssatSGGLLVPPANLQGSATNVNLVLANngnTATDLIKIDQPNNTQKatiS 159

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1382723812 140 QEGNNTLLFS-AYLQGDGASATIVP---GDFTAVADFTLAYQ 177
Cdd:PRK15307  160 TDGTGDLFYRvAYTQGQKWNADTSPvtsGTVQAQVAFTMIYN 201
PRK09723 PRK09723
fimbrial-like adhesin;
52-176 2.66e-04

fimbrial-like adhesin;


Pssm-ID: 236617  Cd Length: 421  Bit Score: 40.54  E-value: 2.66e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  52 TVGMGQISNVALKANgntgtSVPRNFEIKLENCD-VSTLKT-VKTTFTGAEGATDGSLGITGT--AKGASII---LTNGD 124
Cdd:PRK09723  275 TVKMGEYSAEQIKNG-----ATPVPFDISLQNCVrVRNIETkLVSTKVGTENKQLLGNTLTGNdaAKGVGVLiegLKNSK 349

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1382723812 125 GQQLKL-----------------GEASAAHQLQEGNNT---LLFSAYLQGDGaSATIVPGDFTAVADFTLAY 176
Cdd:PRK09723  350 SPQMTLkpndstsvykdyetpdeDDTTGGIYPDQGNGTtqpLHFQATLKQDG-NIAIEPGEFKATSTFQVTY 420
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 29-107 3.86e-03

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 36.23  E-value: 3.86e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  29 GKVTFTGSIIDAPCSIHPDSIDQTVG--MGQISNVALKANGNTGtsvprnFEIKLENCDVSTLKTVKTTFTGAEGATDGS 106
Cdd:PRK15300   29 GTVHITGLIKQNACTVKTDSVEVTLQeeFASLFTAAGQTAGDTD------FTIELENCDANVYSSVQARFEGTLDGTDAT 102


                  .
gi 1382723812 107 L 107
Cdd:PRK15300  103 I 103
PRK15288 PRK15288
putative minor fimbrial subunit StfG; Provisional
 33-176 4.39e-03

putative minor fimbrial subunit StfG; Provisional


Pssm-ID: 185188 [Multi-domain]  Cd Length: 176  Bit Score: 36.16  E-value: 4.39e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723812  33 FTGSIIDAPCSIhpdsIDQTVGMGQISNVALKANGNT--GTSVPRNFEIKLENCDVSTLKTVKTTFTGAEG-------AT 103
Cdd:PRK15288   31 FSGSLVASPCTL----TMQGTGIAEVDFSSLDSSDFTpdGQSARKPLVFELTDCDSALSNGVQVTFTGTEAtgmrgilAI 106

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1382723812 104 DGSLGITGTAKGASIILTNGDGQQLKLGeasAAHQLQEGNNTLLFSAYLQgDGASATIVPGDFTAVADFTLAY 176
Cdd:PRK15288  107 DSYSGASGIGIGIETLSGVPVGMNDEEG---AIFTLVTGKNTLSLNAWVQ-RLPGEDLIPGRFSASALATFEY 175
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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