NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|74676466|sp|Q08322|]
View 

RecName: Full=Seripauperin-20

Protein Classification

SRP1/TIP1 family protein( domain architecture ID 10460761)

SRP1/TIP1 family protein similar to Saccharomyces cerevisiae temperature shock-inducible protein 1 (TIP1) that may have esterase activity and seems to prefer esters of fatty acids from 4 to 16 carbon atoms

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
SRP1_TIP1 pfam00660
Seripauperin and TIP1 family;
23-115 1.20e-35

Seripauperin and TIP1 family;


:

Pssm-ID: 395534  Cd Length: 98  Bit Score: 117.73  E-value: 1.20e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74676466    23 TLAQSDERVNLVELGVYVSDIRAHLAQYYMFQAAHPTETYPVEVAEAVFNYG-----DFTTMLTGISPDQVTRMITGVPW 97
Cdd:pfam00660   1 AVAAADTEVQVAELNVYVNDIKSNLSEYLSLATANPGFSIPDGVLSAYMALAtatddSYTTLFSDIDFSEVSSMITGLPW 80

                          90
                  ....*....|....*...
gi 74676466    98 YSTRLKPAISKALSKDGI 115
Cdd:pfam00660  81 YSSRLAPAIESALSAAGI 98
 
Name Accession Description Interval E-value
SRP1_TIP1 pfam00660
Seripauperin and TIP1 family;
23-115 1.20e-35

Seripauperin and TIP1 family;


Pssm-ID: 395534  Cd Length: 98  Bit Score: 117.73  E-value: 1.20e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74676466    23 TLAQSDERVNLVELGVYVSDIRAHLAQYYMFQAAHPTETYPVEVAEAVFNYG-----DFTTMLTGISPDQVTRMITGVPW 97
Cdd:pfam00660   1 AVAAADTEVQVAELNVYVNDIKSNLSEYLSLATANPGFSIPDGVLSAYMALAtatddSYTTLFSDIDFSEVSSMITGLPW 80

                          90
                  ....*....|....*...
gi 74676466    98 YSTRLKPAISKALSKDGI 115
Cdd:pfam00660  81 YSSRLAPAIESALSAAGI 98
 
Name Accession Description Interval E-value
SRP1_TIP1 pfam00660
Seripauperin and TIP1 family;
23-115 1.20e-35

Seripauperin and TIP1 family;


Pssm-ID: 395534  Cd Length: 98  Bit Score: 117.73  E-value: 1.20e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74676466    23 TLAQSDERVNLVELGVYVSDIRAHLAQYYMFQAAHPTETYPVEVAEAVFNYG-----DFTTMLTGISPDQVTRMITGVPW 97
Cdd:pfam00660   1 AVAAADTEVQVAELNVYVNDIKSNLSEYLSLATANPGFSIPDGVLSAYMALAtatddSYTTLFSDIDFSEVSSMITGLPW 80

                          90
                  ....*....|....*...
gi 74676466    98 YSTRLKPAISKALSKDGI 115
Cdd:pfam00660  81 YSSRLAPAIESALSAAGI 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH