|
Name |
Accession |
Description |
Interval |
E-value |
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
8-534 |
0e+00 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 951.07 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 8 GFSNFPWLSASILFPIGSAFVIPFFPDKGDGKEVRWFALSIALTTFLITVGSYINGFDINNENVQLKENVSWLPDLGLTW 87
Cdd:PRK02546 2 NLANFPWLTTIILFPIVAALLIPFIPDKGDGKTVRWYALIVGLIDFLITVYAFYTGYDFSNPGLQLVESYSWLPQLGLTW 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 88 SVGADGISMPLILLTSFITALAVLAAWPVKFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGK 167
Cdd:PRK02546 82 SVGADGLSMPLILLTGFITTLAVLAAWPVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGK 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 168 NRQYAATKFIIYTAGSSIFILLAALAMGFYGtEIPNFEFSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAH 247
Cdd:PRK02546 162 KRQYAATKFILYTAGSSLFILLAALAMAFYG-DTPTFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAH 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 248 GEATAPVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLI 327
Cdd:PRK02546 241 GEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 328 GIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSEL 407
Cdd:PRK02546 321 GIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAEL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 408 MVFTGFVTDEVYTLPFRVIMASLAAIGVILTPIYLLSMLREIFFGKENPKLTEERKLIDAEPREVYIIACLLLPIIGIGL 487
Cdd:PRK02546 401 MVFVGFATSDAYTLPFRVVVVFLAAVGVILTPIYLLSMLREIFFGPENKELVSHEKLVDAEPREVFIIACLLVPIIGIGL 480
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 123554765 488 YPRLVTESYLASINNLVDRDLTAVKSAVKTNIfsgTKKNEILKAPTI 534
Cdd:PRK02546 481 YPKLVTQSYDATTNQLVARDRDSVPSLAQPTQ---SLVPAILQAPTI 524
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
37-524 |
0e+00 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 706.03 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 37 DGKEVRWFALSIALTTFLITVGSYINGFDINNENVQLKENVSWLPDLGLTWSVGADGISMPLILLTSFITALAVLAAWPV 116
Cdd:PRK12561 3 EGKTVRWYALGVGLADFALMCYVFWQHYDPSSSSLQLVERYAWLPQIGLEWSLGVDGLSMPLVLLSGLITTLSIFASWKV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 117 KFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNRQYAATKFIIYTAGSSIFILLAALAMGF 196
Cdd:PRK12561 83 TRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALAL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 197 YGTEIpNFEFSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQ 276
Cdd:PRK12561 163 SGDTF-TFDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQ 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 277 LLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFF 356
Cdd:PRK12561 242 MLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFF 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 357 LVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGFVTDEVYTLPFRVIMASLAAIGVI 436
Cdd:PRK12561 322 LTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGITSSDVYSSTFRTITILLAAVGLI 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 437 LTPIYLLSMLREIFFGKENPKLTEERKLIDAEPREVYIIACLLLPIIGIGLYPRLVTESYLASINNLVDRDLTAVKSAVK 516
Cdd:PRK12561 402 LTPIYLLSMLRRVFYGPRSELLPALAVVEDAKPRELFIALSLLVPIIGIGFYPKLATQLYDVKTVALAAQLRQALPVIAQ 481
|
....*...
gi 123554765 517 TNIFSGTK 524
Cdd:PRK12561 482 QPQLYAKG 489
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
10-493 |
0e+00 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 655.09 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 10 SNFPWLSASILFPIGSAFVIPFFPDKGdGKEVRWFALSIALTTFLITVGSYINGFDINNENVQLKENVSWLPDLGLTWSV 89
Cdd:CHL00011 2 NYFPWLTIIVVLPIFAGSLIFFLPHRG-NKVIRWYTLCICLLELLLTTYAFCYHFQLDDPLIQLKEDYKWINFFDFHWRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 90 GADGISMPLILLTSFITALAVLAAWPVKFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNR 169
Cdd:CHL00011 81 GIDGLSIGPILLTGFITTLATLAAWPVTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 170 QYAATKFIIYTAGSSIFILLAALAMGFYGTEIPNFEFSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHGE 249
Cdd:CHL00011 161 LYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTLNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 250 ATAPVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGI 329
Cdd:CHL00011 241 AHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 330 GSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMV 409
Cdd:CHL00011 321 GSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 410 FTGFVTDEVYTLPFRVIMASLAAIGVILTPIYLLSMLREIFFGKENPKLTEERkLIDAEPREVYIIACLLLPIIGIGLYP 489
Cdd:CHL00011 401 FFGIITSQKYLLMPKILITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNSY-FFDSGPRELFISICILLPVIGIGIYP 479
|
....
gi 123554765 490 RLVT 493
Cdd:CHL00011 480 DFVL 483
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
10-506 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 557.39 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 10 SNFPWLSASILFPIGSAFVIPFFPDKgDGKEVRWFALSIALTTFLITVGSYInGFDINNENVQLKENVSWLPDLGLTWSV 89
Cdd:COG1008 1 MGMPLLSLLILLPLLGALLLLLLPRR-NARLARWVALAVSLLTLLLSLYLLA-GFDPGTGGFQFVESYPWIPSLGISYHL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 90 GADGISMPLILLTSFITALAVLAAWP-VKFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKN 168
Cdd:COG1008 79 GVDGISLPLVLLTALLTPLAILASWNeIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGER 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 169 RQYAATKFIIYTAGSSIFILLAALAMGFYgTEIPNFEFSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHG 248
Cdd:COG1008 159 RIYAAIKFFLYTLAGSLLMLVAILALYFL-AGALTFDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHV 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 249 EATAPVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIG 328
Cdd:COG1008 238 EAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLG 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 329 IGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELM 408
Cdd:COG1008 318 IFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFL 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 409 VFTGfvtdevyTLPFRVIMASLAAIGVILTPIYLLSMLREIFFGKENPKLteeRKLIDAEPREVYIIACLLLPIIGIGLY 488
Cdd:COG1008 398 VLLG-------AFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEEL---AELPDLNPRELAVLAPLAALILLLGLY 467
|
490
....*....|....*...
gi 123554765 489 PRLVTESYLASINNLVDR 506
Cdd:COG1008 468 PQPLLDLIEPSVEALLAR 485
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
15-504 |
7.89e-166 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 478.67 E-value: 7.89e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 15 LSASILFPIGSAFVIPFFPDKGDGKeVRWFALSIALTTFLITVGSYInGFDINNENVQLKENVSWLPDLGLTWSVGADGI 94
Cdd:TIGR01972 1 LSLLIFLPLIGALLILLLPSNKDGK-ARWIALVVALATLLLSLLLLF-QFDPTGSGFQFTEDIPWIPALGISYHLGVDGI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 95 SMPLILLTSFITALAVLAAWP-VKFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNRQYAA 173
Cdd:TIGR01972 79 SLLLVLLTALLTLLAILASWEsIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 174 TKFIIYTAGSSIFILLAALAMGFYGTEipNFEFSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAP 253
Cdd:TIGR01972 159 MKFFLYTLAGSLLMLLAILGLYFLGGG--TFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 254 VHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFS 333
Cdd:TIGR01972 237 GSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFN 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 334 SLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGF 413
Cdd:TIGR01972 317 ELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGS 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 414 VtdEVYTLPfrvimASLAAIGVILTPIYLLSMLREIFFGKenPKLTEERKLIDAEPREVYIIACLLLPIIGIGLYPRLVT 493
Cdd:TIGR01972 397 F--KVNPVV-----AFLAALGIVLAAAYMLTLYKRVFFGE--LSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLL 467
|
490
....*....|.
gi 123554765 494 ESYLASINNLV 504
Cdd:TIGR01972 468 DLTEPSVNNLL 478
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
10-504 |
2.10e-155 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 452.73 E-value: 2.10e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 10 SNFPWLSASILFPIGSAFVIpFFPDKGDGKEVRWFALSIALTTFLITVGSYInGFDINNENVQLKENVSWLPDLGLTWSV 89
Cdd:PRK05846 1 MNWPLLSLLIFLPLIGGLLV-LLTERFGARLARWIALIGTLLTLLLSLVLWI-GFDSSNAGFQFVEKHPWIPRFGISYHL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 90 GADGISMPLILLTSFITALAVLAAW-PVKFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKN 168
Cdd:PRK05846 79 GVDGISLLLVVLTALLTPLAVLASWeEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGGKN 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 169 RQYAATKFIIYTAGSSIFILLAALAMGFYGT-EIPNFEFSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAH 247
Cdd:PRK05846 159 RIYAATKFFLYTLLGSLLMLVAIIYLVVVYYnATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAH 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 248 GEATAPVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLI 327
Cdd:PRK05846 239 VQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTL 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 328 GIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSEL 407
Cdd:PRK05846 319 GIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEF 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 408 MVFTGFVTdeVYTlpfrvIMASLAAIGVILTPIYLLSMLREIFFGkenPKLTEERKLIDAEPREVYIIACLLLPIIGIGL 487
Cdd:PRK05846 399 LILLGSFQ--VNP-----VIAFIATTGLILAAVYSLWLYQRVMFG---PVKNEVAKLKDLNGRELLILLPLVALLLLLGV 468
|
490
....*....|....*..
gi 123554765 488 YPRLVTESYLASINNLV 504
Cdd:PRK05846 469 YPKPLLDVIHPSVENLL 485
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
15-504 |
2.64e-115 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 350.54 E-value: 2.64e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 15 LSASILFPIGSAFVIPFFPDKGDGKEVRWFALSIALTTFLITVGSYINgFDINNENVQLKENVSWLPDLGLTWSVGADGI 94
Cdd:PRK06473 2 LSALIWIPLLGAILIGFWPSGINGKLARSVALVIASVLLLLSLVLAFQ-FDPGNPNQQFTEFIPWIDSLGLSYHLGVDGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 95 SMPLILLTSFITALAVLAAWPVKFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNRQYAAT 174
Cdd:PRK06473 81 SLPLLVLNSLLTLIAIYSSDESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAAT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 175 KFIIYTAGSSIFILLAALAMGFYgTEIPNFEFSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAPV 254
Cdd:PRK06473 161 KFLLYTAISGILILVSFLGLVWL-SGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 255 HMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSS 334
Cdd:PRK06473 240 SVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATP 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 335 LGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGV---GQKMRIMFALWTACSLASLALPGMSGFVSELMVFT 411
Cdd:PRK06473 320 LSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFR 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 412 G-FVTDEVYTLpfrvimasLAAIGVILTPIYLLSMLREIFFGKENPKLTEERKLIDAEPREVYIIACLllpIIGIGLYPR 490
Cdd:PRK06473 400 GsFPIFPVQTL--------LCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPRVLWSERLPALVLAVL---IVVLGIQPS 468
|
490
....*....|....
gi 123554765 491 LVTESYLASINNLV 504
Cdd:PRK06473 469 WLVRWTEPTATALL 482
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
15-480 |
1.66e-108 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 332.83 E-value: 1.66e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 15 LSASILFPIGSAFVIPFFPDKGDGKEVRWFALSIALTTFLITVGSYINgFDINNENVQLKENVSWLPDLGLTWSVGADGI 94
Cdd:PRK07363 2 LSVLLWLPILGAIIIGFFPGNLPSARLRQITLVFAVLVLAWSLFLLTQ-FDLSDPGMQFQEYLPWNEPLGLSYSLGVDGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 95 SMPLILLTSFITALAVLAAWPVKFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNRQYAAT 174
Cdd:PRK07363 81 SLPLLVLNSLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGYASI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 175 KFIIYTAGSSIFILLAALAMGFYgTEIPNFEFSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAPV 254
Cdd:PRK07363 161 KFLIYTAVSGLLVLAAFLGIVWL-SGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 255 HMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSS 334
Cdd:PRK07363 240 AILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQ 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 335 LGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMR---IMFALWTACSLASLALPGMSGFVSELMVFT 411
Cdd:PRK07363 320 LSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRglpLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 123554765 412 GFVTdevyTLPFRVIMASLAAigvILTPIYLLSMLREIFFGKENPKLTEERKLIDAEPREVYIIACLLL 480
Cdd:PRK07363 400 GSFS----TFPIPTLLCIVAS---GLTAVYFVILLNRTCFGRLDNKLAYYPKVLWSEKIPALILTALIL 461
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-433 |
1.97e-74 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 242.36 E-value: 1.97e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 14 WLSASILFPIGSAFVIPFFPdkGDGKEVRWFALSIALTTFLITVGSYingFDINNENVQLKENVSWLPDLGLTwsVGADG 93
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLG--RRRRLQRALSLLASLALLALALALL---LQVLAGGPLVYALGGWPAPFGIV--LVADR 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 94 ISMPLILLTSFITALAVLAAWP---VKFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNRQ 170
Cdd:COG0651 77 LSALFLLLTALVALAVLLYSIGymrHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 171 YAATKFIIYTAGSSIFILLA-ALAMGFYGTeipnFEFSHLA--AQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAH 247
Cdd:COG0651 157 RAGLKYLILNLVGSALFLLGvGLLYGATGT----LNMADLAarLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAY 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 248 GEATAPVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFA-PLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL 326
Cdd:COG0651 233 PAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPALFLgTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYIL 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 327 IGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSE 406
Cdd:COG0651 313 LGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSK 392
|
410 420
....*....|....*....|....*..
gi 123554765 407 LMVFTGFVTDEVYTLPFRVIMASLAAI 433
Cdd:COG0651 393 WLLLQAALEAGAWLLAAVLLLSSLLTL 419
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
19-500 |
4.30e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 211.45 E-value: 4.30e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 19 ILFPIGSAFVIPFFPDKgDGKEVRWFALSIALTTFLITVGSYINgFDINNENVQLKeNVSWLPDLGLTWSV---GADGIS 95
Cdd:MTH00217 6 FILPLIGILHLLIIPRD-NIVRLKKIALEWSLLTLTATILLWAS-FDGEGQFQAIK-KFEWIPGIEPVFGPvvfAVDGIS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 96 MPLILLTSFITALAVLAAW-PVKFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNRQ-YAA 173
Cdd:MTH00217 83 IFFLILTALLTPICILISWnSIKFLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKvQAS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 174 TKFIIYTAGSSIFILLAALAMGFY-GTEipnfEFSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHGEATA 252
Cdd:MTH00217 163 YYFFFYTFIGSVFMLLGIFTLYSYaGTT----DYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPV 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 253 PVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSF 332
Cdd:MTH00217 239 AGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSH 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 333 SSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTG 412
Cdd:MTH00217 319 TIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLA 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 413 fvtdevyTLPFRVIMASLAAIGVILTPIYLLSMLREIFFGKENPKLTEERkliDAEPREVYIIACLLLPIIGIGLYPRLV 492
Cdd:MTH00217 399 -------AFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYLYFSR---DLNRREFYVLLPLVFLIYLMGIFPFII 468
|
....*...
gi 123554765 493 TESYLASI 500
Cdd:MTH00217 469 IDVIKSSV 476
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
14-492 |
5.24e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 211.08 E-value: 5.24e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 14 WLSASILFPIGSAFVIPFFPDKGDGKeVRWFALSIALTTFLITVGSYInGFDINNeNVQLKENVSWL--PDLGLTWS--- 88
Cdd:MTH00204 2 GLSLIFLILFMGIINVMGVPRENSVK-LKKRALEWSLAILFSTLVLWG-AFDGEG-QFQFINLIEWIisPTLNFQWGplv 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 89 VGADGISMPLILLTSFITALAVLAAW-PVKFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGK 167
Cdd:MTH00204 79 FAVDGVSLFFILLTTLLIPICILISWkSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 168 NRQY-AATKFIIYTAGSSIFILLAALamgFYGTEIPNFEFSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDA 246
Cdd:MTH00204 159 EEKVrASYYFFFYTFAGSVFMLLGIF---QLYSITGTTDYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 247 HGEATAPVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL 326
Cdd:MTH00204 236 HVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVP 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 327 IGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSE 406
Cdd:MTH00204 316 LGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGE 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 407 LMVFtgfvtdeVYTLPFRVIMASLAAIGVILTPIYLLSMLREIFFGKENPKLTEERKLIDaepREVYIIACLLLPIIGIG 486
Cdd:MTH00204 396 FFSL-------LAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNR---RELLAILPLIIAIFLLG 465
|
....*.
gi 123554765 487 LYPRLV 492
Cdd:MTH00204 466 IVPFII 471
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
92-494 |
6.55e-59 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 203.61 E-value: 6.55e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 92 DGISMPLILLTSFITALAVLAAW-PVKFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKN-R 169
Cdd:MTH00226 101 DGISIYFIILTGFIVPCSILISWhSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREeK 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 170 QYAATKFIIYTAGSSIFILLAALAM-GFYGTEipnfEFSHLAAQDF--TQKFQILCYVGLLIAFGVKLPIVPLHTWLPDA 246
Cdd:MTH00226 181 MQAAYYFFFYTLIGSVLMLLCLFSLyNIHGTT----DYLTLASCSHvvSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKA 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 247 HGEATAPVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL 326
Cdd:MTH00226 257 HVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVS 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 327 IGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSE 406
Cdd:MTH00226 337 ITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGE 416
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 407 LMVFtgfvtdeVYTLPFRVIMASLAAIGVILTPIYLLSMLREIFFGKENPKLTEERkliDAEPREVYIIACLLLPIIGIG 486
Cdd:MTH00226 417 YLSI-------LSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFAR---DVNRREFYITASMVFFAFLIG 486
|
....*...
gi 123554765 487 LYPRLVTE 494
Cdd:MTH00226 487 IYPIFILE 494
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
19-492 |
8.19e-53 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 186.62 E-value: 8.19e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 19 ILFPIGSAFVIPFFPDKGDGKEVRWFALSIALTTFLITVGSYINGFDINNENVQLkenvsWLPDLGLTwsVGADGISMPL 98
Cdd:PRK08375 10 VAVPLLAAALIVLLPKRRRLRWALALLVAALTFALAISLLPQVLDGGVIAYVVGG-----WPPGIGIE--LRADSLSALF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 99 ILLTSFITALAVLAAWPVKF-KPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNRQYAATKFI 177
Cdd:PRK08375 83 LLVTSILAIAALLYAIGYGEhRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRRALAAARKYL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 178 IY-TAGSSIFILLAALAMGFYGTEipNFEFSHLAAQDFTQKFQILCYVglLIAFGVKLPIVPLHTWLPDAHGEATAPVHM 256
Cdd:PRK08375 163 IVgLIGSTFLLIGVGLLYGVTGTL--NMADLAGALAENPTVVTAFGFV--LLALALKAAVFPLHTWLPRAYPAAPPVVTA 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 257 LLAGILLKMGGYALLRFNAQLLP---AAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFS 333
Cdd:PRK08375 239 LLSGLVTKVAVYALIRIYFTVFGgdfRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLT 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 334 SLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGF 413
Cdd:PRK08375 319 PLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGA 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 414 VTDEVYTLPFRVIMASLaaigviLTPIYLLSMLREIFFGKEnpklTEERKLIDAEPREVYIIACLLLPII--GIGLYPRL 491
Cdd:PRK08375 399 VEAGQWLVLAVLLASSL------LALLYFLRIWYRAFFGPP----PPGSEAPKQEAPLGMLAPSLALALLslLLGIYAGP 468
|
.
gi 123554765 492 V 492
Cdd:PRK08375 469 L 469
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
92-410 |
1.16e-52 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 184.27 E-value: 1.16e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 92 DGISMPLILLTSFITALAVLAAWPVK---FKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGK- 167
Cdd:MTH00150 23 DSMSSLLISLSLWISGLMMLASQKSVklrNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLILGWGYQp 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 168 NRQYAATKFIIYTAGSSIFILLAALAMGFYGTEIpNFEFSHLAAQDFtqKFQILCYVGLLIAFGVKLPIVPLHTWLPDAH 247
Cdd:MTH00150 103 ERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSS-FMLLISSLRKLL--SSMGLWGLLVFLAFLVKLPMYPFHLWLPKAH 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 248 GEATAPVHMLLAGILLKMGGYALLRFNaQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLI 327
Cdd:MTH00150 180 VEAPVAGSMILAGILLKLGGYGILRMM-MVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLA 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 328 GIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSEL 407
Cdd:MTH00150 259 GVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEI 338
|
...
gi 123554765 408 MVF 410
Cdd:MTH00150 339 MIF 341
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
142-421 |
5.81e-51 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 175.96 E-value: 5.81e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 142 DMLLFFLTWELELIPVYLLLAIWGGK-NRQYAATKFIIYTAGSSIFILLAALAMGFYGTEIPNFEFSHLAAQDFTQKFQI 220
Cdd:pfam00361 3 DLLLMYLGWEAVLLPSYLLIGYWGKSpRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSGLL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 221 LCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPAAhAQFAPLLIVLGVVNIIYA 300
Cdd:pfam00361 83 LLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSS-PFIQQILLILAIISMLLG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 301 ALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGAT-YDRTKTLKLDEMSGVGQK 379
Cdd:pfam00361 162 SLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSViYRRVHTRNIRDYGGLAKT 241
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 123554765 380 MRIMFALWTACSLASLALPGMSGFVSELMVFTGFVTDEVYTL 421
Cdd:pfam00361 242 MPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFL 283
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
89-492 |
2.45e-49 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 176.28 E-value: 2.45e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 89 VGADGISMPLILLTSFITALAVLAA-WPVKFKP----KLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAI 163
Cdd:MTH00206 55 LSYDPLSSPLVILSCWLLPLMFLASqNHMKNEPinrqRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITR 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 164 WG-GKNRQYAATKFIIYTAGSSI--FILLAALAMGFYGTEIPNFEFSHLaaqdfTQKFQILCYVGLLIAFGVKLPIVPLH 240
Cdd:MTH00206 135 WGnQKERLNAGYYFLFYTLIGSLplLIALLFLQNSLGSLSLYILYFSKL-----TTWNNNLWWLACILAFLVKLPLYGVH 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 241 TWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIvLGVVNIIYAALTSFAQRNLKRKIAYSSIS 320
Cdd:MTH00206 210 LWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFII-LGLWGSIMTSSICLRQTDLKSLIAYSSVS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 321 HMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGM 400
Cdd:MTH00206 289 HMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPF 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 401 SGFVSELMVFTGFVTDEVYTLPFrvimaslAAIGVILTPIYLLSMLREIFFGKENPKLTeerKLIDAEPREVYIIACLLL 480
Cdd:MTH00206 369 PNLFGELLIITSLFSWSNFTLPL-------LGLGFLFTAIYSLYMFVMTQHGKTPNHLL---SLSPSSTREHLLLFLHLF 438
|
410
....*....|..
gi 123554765 481 PIIGIGLYPRLV 492
Cdd:MTH00206 439 PVILLILNPNLI 450
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
85-432 |
3.21e-47 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 170.69 E-value: 3.21e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 85 LTWSVGADGISMPLILLTSFITALAVLAAWPVKFK---PKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLL 161
Cdd:MTH00014 51 FTESLSSDMLSAPLITLTLWITALMILASFKIFQNnkaPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLI 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 162 AIWGGK-NRQYAATKFIIYTAGSSIFILLAALAMGFYGTEIPNFEFSHLAAQDFTQKfqiLCYVGLLIAFGVKLPIVPLH 240
Cdd:MTH00014 131 LGWGYQpERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSMEPPSIYLMN---LWWLITILAFMVKMPLYTVH 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 241 TWLPDAHGEATAPVHMLLAGILLKMGGYALLRFnAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSIS 320
Cdd:MTH00014 208 LWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM-SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVG 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 321 HMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGM 400
Cdd:MTH00014 287 HMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPS 366
|
330 340 350
....*....|....*....|....*....|..
gi 123554765 401 SGFVSELMVFTGFVTDEVYTLPFRVIMASLAA 432
Cdd:MTH00014 367 INLLSEIMLLTSILSSSLSTAILLAITSFLAA 398
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
85-493 |
7.10e-47 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 169.77 E-value: 7.10e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 85 LTWSVGADGISMPLILLTSFITALAVLAAW-PVKFKP----KLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYL 159
Cdd:MTH00044 53 LSLSLATDSLSSPLIILSCWLAPLSLLASInHLSNNSpnnqRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLI 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 160 LLAIWGG-KNRQYAATKFIIYTAGSSIFILLAALAMGFY--GTEIPNFEFSHLaaQDFTQKFQILCYVGLLIAFGVKLPI 236
Cdd:MTH00044 133 LITRWGAqKERIQAGLYFLFYTLFGSLPLLISLIAIYSSssSLSIPLSELNWL--TSLSSNSSSIWWIFCILAFLVKMPI 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 237 VPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAY 316
Cdd:MTH00044 211 YGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAY 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 317 SSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLA 396
Cdd:MTH00044 291 SSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLG 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 397 LPGMSGFVSELMVFTGFVTDEVYTLPFrvimaslAAIGVILTPIYLLSMLReifFGKENPKLTEERKLIDAEPREVYIIA 476
Cdd:MTH00044 371 LPPLPNLIGELLIISSIISWSILSFPI-------IGLATVFGAIYSLLIYQ---LTNSGSFPSWISNVSPISSREHLLIF 440
|
410
....*....|....*..
gi 123554765 477 CLLLPIIGIGLYPRLVT 493
Cdd:MTH00044 441 LHLLPLILIIINPNIIL 457
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
20-501 |
8.71e-46 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 168.23 E-value: 8.71e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 20 LFPIGSAFVIPFFPD--KGDGKEVRWFALSIALTTFLITVGSYINGFdiNNENVQLKENVSWLPDLGLTWSVgaDGISMP 97
Cdd:PRK12667 11 ILLVLFAFLLPLLSIllKGNRKIQKIYALLVSLITLILSILLFIQVY--SSNKPIVYLFGGWPAPIGIVYEV--DLLGAL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 98 LILLTSFITALAVLAAWPV---KFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNRQ-YAA 173
Cdd:PRK12667 87 LGLLTALVMFLILIYSYWYlehESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAvEAA 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 174 TKFIIYTA-GSSIFILLAALAMGFYGTeipnFEFSHLAAQDFTQKFQ------------ILCYVGL-LIAFGVKLPIVPL 239
Cdd:PRK12667 167 IKYALIGAvGTTLYFLALAFLYATFGT----LNMADLSAKIRGLSFPltgglagnpplaLGVALALaLWAFTIKAAIFPN 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 240 HTWLPDAHGEATAPVHMLLAGILLKMGGYALLRF-------NAQLLPAAHAqFAPLLIVLGVVNIIYAALTSFAQRNLKR 312
Cdd:PRK12667 243 HFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAA-LSPILIILGAVSAIIGALMMVVQKDVKR 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 313 KIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSL 392
Cdd:PRK12667 322 LLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGAL 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 393 ASLALPGMSGFVSELMVFTGFVTDEVYTlpfrvimasLAAIGVILTPIYLLSMLR---EIFFGKenPKLTEERKLIDAEP 469
Cdd:PRK12667 402 SLVGIPPLNGFFSKLLLFNALLESGFYL---------PALVLLIASAISLVGYFRawySLFFGK--PKSGEEVEHKESPS 470
|
490 500 510
....*....|....*....|....*....|..
gi 123554765 470 REVYIIAcLLLPIIGIGLYPRLVTESYLASIN 501
Cdd:PRK12667 471 MSVVILV-LALAVLILGILALFLPEILDSLIE 501
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
85-408 |
1.15e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 158.01 E-value: 1.15e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 85 LTWSVGADGISMPLILLTSFITALAVLAAWPVK---FKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLL 161
Cdd:MTH00163 48 ISYFFGLDLLSFGLILLSFWICMLMILSSESVYkknNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 162 AIWGGKN-RQYAATKFIIYTAGSSiFILLAALAMGFYGTEIPNFEFShlaaqDFTQKFQILCYVGLLIAFGVKLPIVPLH 240
Cdd:MTH00163 128 LGWGYQPeRLQAGIYLLFYTLFAS-LPLLVGIFYLYNNSGSLSFFLL-----NFFGSLNFLWYLSMILAFLVKMPMFFVH 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 241 TWLPDAHGEAtaPVH--MLLAGILLKMGGYALLRFNAQLLPAAhAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSS 318
Cdd:MTH00163 202 LWLPKAHVEA--PVSgsMILAGVLLKLGGYGLLRVMSFFSKLG-LKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSS 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 319 ISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALP 398
Cdd:MTH00163 279 VAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAP 358
|
330
....*....|
gi 123554765 399 GMSGFVSELM 408
Cdd:MTH00163 359 PSLNLLGEIS 368
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
90-446 |
9.57e-41 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 152.80 E-value: 9.57e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 90 GADGISMPLILLTSFITALAVLA-----AWPVKFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIW 164
Cdd:MTH00127 58 ATDPLSTPLLVLTCWLLPLMILAsqnhtAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRW 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 165 GGK-NRQYAATKFIIYTAGSSIFILLAALAMGFYGTEIPNFEFSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWL 243
Cdd:MTH00127 138 GNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWL 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 244 PDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLlIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMG 323
Cdd:MTH00127 218 PKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPF-IILALWGIIMTGSICLRQTDLKSLIAYSSVSHMG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 324 FVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGF 403
Cdd:MTH00127 297 LVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNL 376
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 123554765 404 VSELMVFTGFVTDEVYTLpfrvimaSLAAIGVILTPIYLLSML 446
Cdd:MTH00127 377 MGELMIITSLFNWSPWTL-------ALTGLGTLITAGYSLYMF 412
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
90-493 |
1.78e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 152.27 E-value: 1.78e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 90 GADGISMPLILLTSFITALAVLAAW------PVKFKpKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAI 163
Cdd:MTH00124 57 GIDQISAPLLVLSCWLLPLMILASQnhlqhePLQRK-RTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITR 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 164 WGG-KNRQYAATKFIIYTAGSSIFILLAALAM-GFYGTeiPNFEFSHLAAQDFT-QKFQILCYVGLLIAFGVKLPIVPLH 240
Cdd:MTH00124 136 WGNqPERLSAGTYFLFYTLISSLPLLIAILYLhNQTGT--LSLPMLQLTHPTLTnSWTNLLLWLACLMAFMVKMPLYGLH 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 241 TWLPDAHGEATAPVHMLLAGILLKMGGYALLRFnAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSIS 320
Cdd:MTH00124 214 LWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRI-TLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVS 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 321 HMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGM 400
Cdd:MTH00124 293 HMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPT 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 401 SGFVSELMVFTgfvtdevyTL----PFRVIMASLAAigvILTPIYLLSMLREIFFGKENPKLTEerkLIDAEPREVYIIA 476
Cdd:MTH00124 373 INLMGELTIMT--------SLfnwsPTTIILTGLAT---LITASYTLYMFLSTQRGTLPTHITT---IQPTHTREHLLMT 438
|
410
....*....|....*..
gi 123554765 477 CLLLPIIGIGLYPRLVT 493
Cdd:MTH00124 439 LHIIPLLLLILKPELIS 455
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
90-446 |
2.57e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 151.61 E-value: 2.57e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 90 GADGISMPLILLTSFITALAVLAAWP-VKFKP----KLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIW 164
Cdd:MTH00068 57 GIDQISSPLLILTCWLLPLMILASQNhLKNEPinrqRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRW 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 165 GG-KNRQYAATKFIIYTAGSSIFILLAALAM-GFYGTEIPNFEFSHLAAQDFTQKFQILcYVGLLIAFGVKLPIVPLHTW 242
Cdd:MTH00068 137 GNqEERLNAGTYFLFYTLAGSLPLLIALLILqNSLGSLSLILLELMSPMQLMTYTNKIW-WLACLLAFMVKMPLYGLHLW 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 243 LPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIvLGVVNIIYAALTSFAQRNLKRKIAYSSISHM 322
Cdd:MTH00068 216 LPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYPFII-LALWGVLMTSLICLRQTDLKSLIAYSSVSHM 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 323 GFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSG 402
Cdd:MTH00068 295 GLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPN 374
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 123554765 403 FVSELMVFTGFVTDEVYTLpfrvimaSLAAIGVILTPIYLLSML 446
Cdd:MTH00068 375 LWGELTIMVSLFNWSNWTI-------LITGLGTLITAAYTLYMF 411
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
119-493 |
8.06e-40 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 152.84 E-value: 8.06e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 119 KPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNRQYAATKFIIYTAGSSIFILLAALAMGFYG 198
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 199 TeipnFEFSHLAA--QDFTQKFQILCYVGLLIAFGV-KLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNA 275
Cdd:PRK08668 176 T----FDFADISQglINDTSTGFALIVFLFLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLY 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 276 QLLPA----------AHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMV 345
Cdd:PRK08668 252 VLPGTklfsefgtyrGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVF 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 346 SHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGFVTDEVytlpfrV 425
Cdd:PRK08668 332 NHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGM------P 405
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 426 IMASLAAIGVILTPIYLLSMLREIFFGKENPKL--TEERKLIDAEPrevyiIACLLLPIIGIGLYPRLVT 493
Cdd:PRK08668 406 ITAFMAFFGSIGSFLYVFRPLAGVFLGQLPSDHkdVKEAPLPMLIP-----MAILVLLNVVFGVAPGLVL 470
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
88-433 |
5.56e-39 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 147.82 E-value: 5.56e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 88 SVGADGISMPLILLTSFITALAVLAAWPV---KFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIW 164
Cdd:MTH00205 52 SFSFDSLSLPLIMLSFWISLLMVLASYKVfksNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGW 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 165 GGK-NRQYAATKFIIYTAGSSIFILLAALAMGFYgteipNFEFSHLAAQDFTQKFQILCYVG--LLIAFGVKLPIVPLHT 241
Cdd:MTH00205 132 GYQpERLQASMYMMMYTLCASLPLLIGLFFLNSL-----NFSLSMFFNFPLNFSDFYLFLYWifLMLAFLVKLPMYFVHL 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 242 WLPDAHGEATAPVHMLLAGILLKMGGYALLRFnAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISH 321
Cdd:MTH00205 207 WLPKAHVEAPVSGSMILAGVLLKLGGYGLIRI-TSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGH 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 322 MGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMS 401
Cdd:MTH00205 286 MGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSL 365
|
330 340 350
....*....|....*....|....*....|..
gi 123554765 402 GFVSELMVFTGFVTDEVYTLPFRVIMASLAAI 433
Cdd:MTH00205 366 NLASEILLIMSLLSSSKISGIPLSLISFLSGA 397
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
91-494 |
8.32e-38 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 144.87 E-value: 8.32e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 91 ADGISMPLILLTSFITALAVLAAWP-VKFKPKL---FFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGG 166
Cdd:COG1007 68 VDGFALFFKLLILLAALLVLLLSRDyLERRGLLrgeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRD 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 167 KNRQY-AATKFIIYTAGSSIFILL-AALAMGFYGTeiPNFE--FSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTW 242
Cdd:COG1007 148 DRRSSeAALKYFLLGALSSGFLLYgISLLYGATGS--LNLAgiAAALAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 243 LPDAHGEATAPVHMLLAGILlKMGGYA-LLRFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISH 321
Cdd:COG1007 226 TPDVYEGAPTPVTAFLATAP-KIAAFAaLLRLLVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 322 MGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGA-TYDRTKTLKLDEMSGVGQKMRIMFALWTACsLASLA-LPG 399
Cdd:COG1007 305 AGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFAVILLlSRKGGEAEEIEDLAGLARRSPLLALAMTIF-LLSLAgIPP 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 400 MSGFVSELMVFTGFVTDEVYTlpfrvimasLAAIGVILTPI---YLLSMLREIFFGKEnpklTEERKLIDAEPREVYIIA 476
Cdd:COG1007 384 TAGFFGKFYVFSAAVEAGLYW---------LAVIAVLNSVIsayYYLRVVKAMYFDEP----EEEAPISAPPGLRVALVI 450
|
410
....*....|....*...
gi 123554765 477 CLLLpIIGIGLYPRLVTE 494
Cdd:COG1007 451 AALL-VLLLGIFPGPLLD 467
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
221-412 |
2.17e-37 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 144.30 E-value: 2.17e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 221 LCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFA-PLLIVLGVVNIIY 299
Cdd:PRK06458 215 LAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPgRLLLIFGLLSVLV 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 300 AALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQK 379
Cdd:PRK06458 295 AAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKV 374
|
170 180 190
....*....|....*....|....*....|...
gi 123554765 380 MRIMFALWTACSLASLALPGMSGFVSELMVFTG 412
Cdd:PRK06458 375 SPLTGWGLMLGALAIAGMPPFGVFISEFLILTA 407
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
14-461 |
2.40e-35 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 139.90 E-value: 2.40e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 14 WLSASILFPIGSAFVIPFFPDKGDGKEVRWFALSIALTTFLITVGSYINGFDinneNVQLKENVSWLP--DLGLTWSVGA 91
Cdd:COG1009 3 LLWLIPLLPLLGALLAGLLGRRLGRRAAGWLAALAPLAAFVLSLLLFPAVLG----GEVVVELYTWIPvgSLGLDFGFRL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 92 DGISMPLILLTSFITALAVL-AAWPVKFKPKL--FFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKN 168
Cdd:COG1009 79 DGLSLLMLLLVTGVGLLVHIySIGYMSGDPGLarFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKP 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 169 R-QYAATKFIIYTAGSSIFILLAALAMGFY-GTeipnFEFSHLAAQ-DFTQKFQILCYVGLLIAFGV--KLPIVPLHTWL 243
Cdd:COG1009 159 SaRRAARKAFLVTRVGDLGLLLGILLLGAIaGT----LNFSELLAAaPTILSSPLLTLILLLLLLGAfgKSAQFPLHFWL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 244 PDAHgEATAPV----H---MLLAGIllkmggYALLRFNAQLLPAAHAQfaPLLIVLGVVNIIYAALTSFAQRNLKRKIAY 316
Cdd:COG1009 235 PDAM-EGPTPVsallHaatMVKAGV------YLLARLSPLFALSPVWL--TVVAIIGAITALFAALIALAQTDIKRVLAY 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 317 SSISHMG--FVLIGIGsfsslGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLAS 394
Cdd:COG1009 306 STVSQLGymFLALGVG-----AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSL 380
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 123554765 395 LALPGMSGFVSELMVFTGFVTDEVytlpFRVIMASLAAIGVILTPIYLLSMLREIFFGKENPKLTEE 461
Cdd:COG1009 381 AGIPPFAGFFSKEAILEAALEAGG----LGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKH 443
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
91-494 |
4.11e-33 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 131.87 E-value: 4.11e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 91 ADGISMPLILLTSFITALAVLAAWPVKFKPKL--FFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKN 168
Cdd:PRK05777 71 VDGFALFLKGLILLASLLALLLARPYLEDRGRgeFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRR 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 169 R-QYAATKFIIYTAGSSIFILL-AALAMGFYGTeipnFEFSHLA-AQDFTQKFQILCYVG---LLIAFGVKLPIVPLHTW 242
Cdd:PRK05777 151 RsLEAAIKYFVLGALASGFLLYgMSLLYGATGS----LSFAGIAkALADGSGNSLLLLFGlvfLLVGLAFKLSAVPFHMW 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 243 LPDAHGEATAPVHMLLAGILlKMGGYA-LLRFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISH 321
Cdd:PRK05777 227 TPDVYEGAPTPVTAFLATAP-KIAAFAvLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAH 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 322 MGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTL-KLDEMSGVGQKMRIMFALWTACSLASLALPGM 400
Cdd:PRK05777 306 AGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAeSISDFAGLSKRSPLLAAVMTIFMLSLAGIPPT 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 401 SGFVSELMVFTGFVTDEVYTlpfrvimasLAAIGVILTPI---YLLSMLREIFFGKenPKLTEERKLIDAEPREVYIIAC 477
Cdd:PRK05777 386 AGFWGKFYVFEAAVEAGLWW---------LAVIGVLNSAIgafYYLRVIKLMYFDE--PPRDAPVNWPLSAGGAVLSVSA 454
|
410
....*....|....*..
gi 123554765 478 LLlpIIGIGLYPRLVTE 494
Cdd:PRK05777 455 LL--VLVLGIFPQPLLD 469
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
81-446 |
5.54e-32 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 128.09 E-value: 5.54e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 81 PDLGLTWSV--GADGISMPLILLTSFITALAVLAAW------PVKFKpKLFFFLILVMDGGQIAVFAVQDMLLFFLTWEL 152
Cdd:MTH00110 46 NDNSLNFSLlfFSDSLSTPLLILTTWLLPLMLMASQhhlskePLTRK-KLYITMLILLQLFLIMTFTATELIMFYILFEA 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 153 ELIPVYLLLAIWGGKN-RQYAATKFIIYTAGSSIFILLAALAM-GFYGTEipNFEFSHLAAQDFTQKF-QILCYVGLLIA 229
Cdd:MTH00110 125 TLIPTLIIITRWGNQTeRLNAGLYFLFYTLVGSLPLLVALLYIqNNLGSL--NFLLLQLWAQPLPNSWsNNLLWLACMMA 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 230 FGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIvLGVVNIIYAALTSFAQRN 309
Cdd:MTH00110 203 FMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPFLM-LSLWGMIMTSSICLRQTD 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 310 LKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTA 389
Cdd:MTH00110 282 LKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLL 361
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 123554765 390 CSLASLALPGMSGFVSELMvftgfvtdevytlpfrVIMAS---------LAAIGVILTPIYLLSML 446
Cdd:MTH00110 362 ASLTNLALPPTINLIGELF----------------VIMSSfswsnitiiLMGLNMLITALYSLYML 411
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-410 |
5.91e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 126.24 E-value: 5.91e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 79 WLPDLGLTwsVGADGISMpLILLTSFITALAVLA------------AWPVK-FKPKlffFLILVMdgGQIAVFAVQDMLL 145
Cdd:PRK12665 64 WDAPIGIT--LVVDRLSA-LMLVVSSVVLLAVLVyaigqgirdgdeEQPVSiFLPT---YLILVA--GVSNAFLAGDLFN 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 146 FFLTWELELIPVYLLLAIWGGKNRQYAATKFIIYTAGSSIfILLAALAMGFYGTEIPNFEFSHLAAQDFTQKFQILCYVG 225
Cdd:PRK12665 136 LYVGFEILLVASYVLLTLGATAARVRAGVTYVMVSMVSSL-LFLIGIALVYAATGTLNMADLAVRLDELPSGTRTALFAV 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 226 LLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPaaHAQFAPLLIVLGVVNIIYAALTSF 305
Cdd:PRK12665 215 LLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP--GGGLDTLLMVVALLTMVVGILGAI 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 306 AQRNLKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFA 385
Cdd:PRK12665 293 AQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAV 372
|
330 340
....*....|....*....|....*
gi 123554765 386 LWTACSLASLALPGMSGFVSELMVF 410
Cdd:PRK12665 373 LFFVPALNLGGIPPFSGFIGKVALL 397
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
19-438 |
3.29e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 123.14 E-value: 3.29e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 19 ILFPIGSAFVIPFFPdkgdgKEVRWFALSIALTTFLITVGSYINGFDINnenvqlkenVSWLPDLGLTWSvgADGISMPL 98
Cdd:PRK07234 9 IALPFLLGFAIYLLP-----KLDRNLALGMAIVSAVYALGLVASMVPLE---------LTLLDNFGVTLR--ADALSGYF 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 99 ILLTSFITALAVLAAWPvKFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAiWGGKNRQY-AATKFI 177
Cdd:PRK07234 73 ILTNALVTLAVIFYCWE-SAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIwVGLRYL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 178 IYTAGSSIFILLAAlamGFYGTEIPNFEFSHLAAQDFTQkfqilcyVGLLIA-FGVKLPIVPLHTWLPDAHGEATAPVHM 256
Cdd:PRK07234 151 FYSNVAMLFYLIGA---VLVYQANGTFAFSGLATADPEA-------FALIALgLLVKGGIFVSGLWLPLTHSEAEPPVSA 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 257 LLAGILLKMGGYALLRfnaqlLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIG--IGSFSS 334
Cdd:PRK07234 221 LLSGVVVKAGVFPLVR-----CALDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAplVGGLYA 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 335 LgtsgamlqmvSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGqkmrimfaLWTACSLASLA---LPGMSGFVSELMVFT 411
Cdd:PRK07234 296 L----------AHGLVKSTLFLCAGALPSRNFTELISQMLGIG--------KWIPLTMASFSiagFPLLAGFVSKVLTLK 357
|
410 420
....*....|....*....|....*..
gi 123554765 412 GfvtdevyTLPFRVIMASLAAIGVILT 438
Cdd:PRK07234 358 N-------LLPWQAIALNLAAVGTAAS 377
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
19-522 |
7.29e-30 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 122.57 E-value: 7.29e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 19 ILFPIGSAFVIPFFpdKGDGKevRWFALSIALTTFLITVgsyINGFDINNENVQLKENV----SWLPDLGLTWSVGADGI 94
Cdd:PRK08377 9 IALPLISAFFVPVI--KGIGK--SAVRYYLILITLLQTG---IAGWVFMEVYTTGKPIIimagGWKPPVGINLYIGPFAA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 95 SMPLIL-LTSFITALAVLAAWPVKFKPKL-FFFLILVMdgGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNRQYA 172
Cdd:PRK08377 82 LFVLIIaIVSFIMSIFSLKAVEVEPIDKYaMLFLLLML--GATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 173 ATKFIIYTA-GSSIFILLAALAMGFYGTeipnFEFSHLA--AQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHGE 249
Cdd:PRK08377 160 SMKYIVLGGiGSSFFLIGVALIYGATGT----LNMAHIAqlAGTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 250 ATAPVHMLLAGILLKMGGYALLRFNAQLLPA-AHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIG 328
Cdd:PRK08377 236 APHPITVMFSAFVVKAGLYAMARILYLMQNAnGWSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALA 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 329 IGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELM 408
Cdd:PRK08377 316 LALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFR 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 409 VFTGFVTDEVYTLPFRVIMASlaaigvILTPIYLLSMLREIFFGKENPKLTEERKlidaepreVYIIACLL-LPIIGIGL 487
Cdd:PRK08377 396 IILAGLSAGYTWPVALVLGAS------VVEAVYYFRLIHTMWFKGEGERIRENAA--------IGIILLLLaALIVVIGI 461
|
490 500 510
....*....|....*....|....*....|....*
gi 123554765 488 YPrlvteSYLASINNLVDRDLTAVKSAVKTNIFSG 522
Cdd:PRK08377 462 YP-----TPFWEVVQKAGSDIFNVAQYVKNVPLMG 491
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
135-434 |
4.25e-29 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 121.76 E-value: 4.25e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 135 IAVFAVQDMLLFFLTWEL-ELIPVYLLLAIWGGKNRQYAATKFIIYTAGSSIFILLAALAMgFYGTEipNFEFSHLAAQD 213
Cdd:PRK08667 125 LGVVASANTFSFLFFWEImALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVL-FIQTG--SFELSPLGASA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 214 FTQKFQILCyvgLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLpAAHAQFAPLLIVLG 293
Cdd:PRK08667 202 GILSLVFLL---LFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVL-SPELWWGVLILLAG 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 294 VVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIG-----------SFSSLGTSGAMLQMVSHGLIGASLFFLVGATY 362
Cdd:PRK08667 278 SISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGlyvifgvygldTLALLALGGALFHSLNHALFKSLLFLTAGSVV 357
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 123554765 363 DRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGF-----VTDEVYTLPFRVIMASLAAIG 434
Cdd:PRK08667 358 HATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFfqsfsVADPLIKILLFSVLAIFALTS 434
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-506 |
1.10e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 119.43 E-value: 1.10e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 14 WLSASILFPIGSAFVIPFFPDKGDGKEVRWFALSIALT---TFLITVGSYING-----FDINNENVQLKENVSWLPdLGL 85
Cdd:PRK08376 6 LPPLLIIIPLFGAFSMPIVSLLGGKAREIWAVLISFLTlivALLVFYEVWNNGtivyvLGAESPTLTLPFGSGGFP-IRI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 86 TWSVGADGISMPLIL-LTSFITALAVLAAWPVKFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIW 164
Cdd:PRK08376 85 IWEVDLFGAFMALIAtIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFR 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 165 GGKNRQY-AATKFIIYTAGSSIFILLA-ALAMGFYGTEipNFEFSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTW 242
Cdd:PRK08376 165 NDTWEAIeAGIKYMFVGSLASSMVLLGiALLYGQYGTL--NMAYLAVKMSENPTVVAKIALALFIAGLAMKSGAVPVHMW 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 243 LPDAHGEATAPVHMLLagILLKMGG-YALLRFNAQLL-PAAHAQFAP-LLIVLGVVNIIYAALTSFAQRNLKRKIAYSSI 319
Cdd:PRK08376 243 LPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYgPAINLATVGwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 320 SHMGFVLIGIG------------SFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALW 387
Cdd:PRK08376 321 SQIGYMLLGLGvglaalgdpamaSYGEIALAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAF 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 388 TACSLASLALPGMSGFVSELMVFTGfvtdevyTLPFRVIMASLAAIGVILTPIYLLSMLREIFFGKENPKLTEERklida 467
Cdd:PRK08376 401 LIGAAAIVGLPPFNGFASKWLIYES-------SALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMNVK----- 468
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 123554765 468 EPREVYIIACLLLP--IIGIGLYPRLVTESYLA-SINNLVDR 506
Cdd:PRK08376 469 EPPKPMLVPMLILAiaIIGMGLFPWQISDKLMApAAKALEDQ 510
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
145-403 |
1.82e-28 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 118.32 E-value: 1.82e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 145 LFFLTWELELIPVYLLLAIWGGKNRQYAATKFIIYTAGSSIF-----ILLAALAMGFYGTEIPNFEFSHLAAQDFTQKFQ 219
Cdd:PRK08676 126 LFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAMIFafiglIFLFSLTRQALGTGTLNWTELAAHASLLSPSVL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 220 ILCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLL-PAAHAQFAPLLIVLGVVNII 298
Cdd:PRK08676 206 GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRqSGAAEQFSNVLIGLGIFSIA 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 299 YAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVgq 378
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDV-- 363
|
250 260
....*....|....*....|....*.
gi 123554765 379 kMRIM-FALWTACsLASLALPGMSGF 403
Cdd:PRK08676 364 -FRLQpVAAWGVI-LGSAAIIGMPPF 387
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
79-493 |
1.13e-27 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 116.20 E-value: 1.13e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 79 WLPDLGLTWSvgADGISMPLILLTSFITALAVLAAWPV--KFKPKLFFF-LILVMDGGQIAVFAVQDMLLFFLTWELELI 155
Cdd:PRK12663 65 WLPPFGIQFT--GDSLSALMVTTASFVATAIMAYGFGDieHSGRRYGFPpFILLLMAGVIGSFLTGDLFNLYVWFEVMLI 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 156 PVYLLLAIWGGKNRQYAATKFIIYTAGSSIFILLA-ALAMGFYGTeipnFEFSHLAAQ--DFTQKFQILCYVGL-LIAFG 231
Cdd:PRK12663 143 ASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGiGLLYGTFGT----LNMAHIAMRlnDMGDTATLTTIALLfLLAFG 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 232 VKLPIVPLHtWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLK 311
Cdd:PRK12663 219 MKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIR 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 312 RKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACS 391
Cdd:PRK12663 298 RIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILI 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 392 LASLALPGMSGFVSELMVFTGFVTDEVYtlpfrvIMASLAAIGVILTPIYLLSMLREIFFGKENPKLTEERKLidaEPRE 471
Cdd:PRK12663 378 FAIGGLPPFSGFWGKVLLVQGALDNGAY------ILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPI---PLYR 448
|
410 420
....*....|....*....|..
gi 123554765 472 VYIIACLLLPIIGIGLYPRLVT 493
Cdd:PRK12663 449 KLPLSILAVVVIAMGIAAEPLL 470
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
42-487 |
2.10e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 115.43 E-value: 2.10e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 42 RWFALsiaLTTFLITVGSYINGFDINNENVQLKENVSWLPDLGLTWSvgADGISMPLILLTSFITALAVLAAWPVKFKPK 121
Cdd:PRK07691 31 RYVAL---IGSLLTLVAAIILVANVYKHGIQTLELGNWKAPFGIVFV--ADMFAALLVLTSSIITFLVILYSFQTIGIER 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 122 ---LFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNRQYAATKFIIYTAGSSIFILLA-ALAMGFY 197
Cdd:PRK07691 106 eryYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLINVVSSAFFVVAvAILYSVV 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 198 GTeipnFEFSHLA---AQDFTQKFQILCYVGLL--IAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLR 272
Cdd:PRK07691 186 GT----LNMADISvkiAELSAGQTGLITVVAILflFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIAR 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 273 FNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGA 352
Cdd:PRK07691 262 TFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKA 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 353 SLFFLVGATYDRTKTLKLDEMSGVGQKMRI---MFALwTACSLAslALPGMSGFVSELMVFTGFVTDEVYTLPFRVIMAS 429
Cdd:PRK07691 342 ALFLLIGIMIKITGTTDLKKMGGLIKRYPVlgwMFFI-AALSLA--GIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSS 418
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 123554765 430 LaaigviltpIYLLSMLR---EIFFGKEnpKLTEERKLIDAEpREVYIIACLLLPIIGIGL 487
Cdd:PRK07691 419 L---------LVLYSVIKiflKGFWGEP--KGYDLNNKVPVK-KLLLPAVVLVAITILYGL 467
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
192-438 |
1.06e-25 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 111.13 E-value: 1.06e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 192 LAMGFYGTEIPNFEFSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALL 271
Cdd:PRK06521 182 LAFGLLARESGSYDFAAMRAAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGIL 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 272 RFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIG-----------SFSSLGTSGA 340
Cdd:PRK06521 262 RVVFDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGlamvfiaygmpLLAALALTAA 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 341 MLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRimfalWTAC-----SLASLALPGMSGFVSELMVFTGFVT 415
Cdd:PRK06521 342 LYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMP-----WTAWafligCLAISALPPLNGFVSEWLLLQSLLS 416
|
250 260
....*....|....*....|...
gi 123554765 416 DEVYTLPFRVIMASLAAIGVILT 438
Cdd:PRK06521 417 SPGLPQWGLKLAVPIAAAMLALT 439
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
75-492 |
2.69e-25 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 110.40 E-value: 2.69e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 75 ENVSWLPDLGLTWSVGADGISMPLILLTSFITALAVL--AAWPVKFKPKLFFFlilvmdGGQIAVFA--------VQDML 144
Cdd:PRK12644 56 EVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLycARYFDDDEPRLGRF------AAELVAFAgamfglvtSDNLL 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 145 LFFLTWELELIPVYLLLAIWGGK--NRQYAATKFIIYTAGssifillaALAM--GF--YGTEIPNFEFSHLAAQDFTQKF 218
Cdd:PRK12644 130 LLYVFWELTTVLSFLLIGHYAERaaSRRAALQALLVTTAG--------GLAMlvGIiiLGQAAGTYRLSELLADPPTGPA 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 219 QILCYVGLLIAFGVKLPIVPLHTWLPDAHgEATAPVHMLL-AGILLKMGGYALlrfnAQLLPA-AHAQF-APLLIVLGVV 295
Cdd:PRK12644 202 VSVAVVLILVGALSKSAIVPFHFWLPGAM-AAPTPVSAYLhAAAMVKAGIYLV----ARLAPGfADVPVwRPTVLVLGLA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 296 NIIYAALTSFAQRNLKRKIAYSSISHMGF--VLIGIGSFSSLGTSGAMLqmVSHGLIGASLFFLVGATYDRTKTLKLDEM 373
Cdd:PRK12644 277 TMLLGGWRALRQHDLKLILAYGTVSQLGFltVLVGIGTRDAALAGLAML--LAHALFKAALFLVVGIIDHSTGTRDIRKL 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 374 SGVGQKMRIMFALwTACSLASLA-LPGMSGFVSELMVFTGFVTDEVYTLPFRVIMASLaAIGVILTPIYLLSMLREIFFG 452
Cdd:PRK12644 355 SGLGRRQPVLAVV-AALAAASMAgLPPLLGFVAKEAALEAVLHDGALGPAGPVVLAGI-VLGSILTVAYSLRFLWGAFAR 432
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 123554765 453 KENPKLTEERKLIDAePREVYIIACLLLPIIGI--GLYPRLV 492
Cdd:PRK12644 433 KPGAFPSVAVTEMHR-PSPLFLAPPAVLAVLGLvlGLLPAPL 473
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
17-457 |
1.50e-24 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 106.60 E-value: 1.50e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 17 ASILFPIGSAFVIPFFPDKGDGKEVRWFALSIALTTFLITVGSYING-FDINNENVQLKEnvswlpdlGLTWSVGADGIS 95
Cdd:PRK06525 6 LTLLLPFIGALVVFFLPGRRAAELGVLFAALTTLCMLSLAYAFYQAGkVAVTLTLVNLGD--------VALFGLVIDPVS 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 96 MPLILLTSFITALAVLAA----------WPVKFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWG 165
Cdd:PRK06525 78 VLIGFVVVLLGLLVTLYStgymspgnreHPVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQ 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 166 GKNRQYAATKFIIYTAGSSIFiLLAALAMGFygTEIPNFEFShlAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPD 245
Cdd:PRK06525 158 SPKALRSALKALLITHIGSLG-LYLAAATLF--LQTGTFALS--ALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPD 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 246 AHgEATAPVHMLL-AGILLKMGGYALLRFNAQLLPAAHaQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 324
Cdd:PRK06525 233 AM-EAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPH-VIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGY 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 325 VLIGIGSF---SSLGTSGAMLQMVSHGLIgASLFFLV-GATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGM 400
Cdd:PRK06525 311 MFFGLSLAilgSRLALEGSIAYIFNHAFA-KSLFFLVaGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPF 389
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 123554765 401 SGFVSELMVFT-GFVTDEVYTLPFrvIMASLAAIGVILTPIYLLSMLREIFFGKENPK 457
Cdd:PRK06525 390 NGFFSKFPIFAaGFELSVEYWILL--PAMVLLLIESVASFAWFLRWFGRVVFGEPSEA 445
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
14-437 |
2.11e-24 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 106.90 E-value: 2.11e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 14 WLSASILFPIGsAFVIPFFPdkgdGKEVRWFALSIALTTFL----ITVGSYINgfdinnenvqlkenvswLPDLGLTWSV 89
Cdd:PRK12668 5 FLPPALVFIAG-ALLVPFLP----GRARKALLLLAPVLAVLavltVPEGTYLT-----------------VTFLGFDLVL 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 90 G-ADGISMPLILLTSFITALAVLAAWPVKFKPKLFFFLILVmdGGQI-AVFAvQDMLLFFLTWELELIPVYLLlaIWGGK 167
Cdd:PRK12668 63 GrVDKLSRVFGLIFGIMAFIGVIYALHVKDPGQHVAALLYV--GSALgAVFA-GDLLTLFVFWELMAFTSTFL--VWARG 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 168 NRQYAATKF---IIYTAGSSIfiLLAALAmgFYGTEIPNFEFSHLAAQDFTQKFQILcyvgllIAFGVKLPIVPLHTWLP 244
Cdd:PRK12668 138 TKAAVRAGFrylLVHVLGGVL--LLAGIL--LHYAETGSFAFGAIAGLGGTAAWLIL------IGFGVNAAFPPLHAWLP 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 245 DAHGEATAPVHMLLAGILLKMGGYALlrfnAQLLPAAHaqfapLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 324
Cdd:PRK12668 208 DAYPEATVTGSVFLSAFTTKTAVYAL----ARAFPGTE-----LLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGY 278
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 325 VLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFV 404
Cdd:PRK12668 279 MVAGIGIGTALAINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFV 358
|
410 420 430
....*....|....*....|....*....|...
gi 123554765 405 SELMVFTGFVTDEVYTLpfrVIMASLAAIGVIL 437
Cdd:PRK12668 359 SKSMIISAAGEDHYVWV---WLLLLLASAGTFL 388
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
52-441 |
6.51e-24 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 106.28 E-value: 6.51e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 52 TFLITVGSYINGFDINNENVQLKENVSWLPDLG-----LTWSVGADGISMPLILLTSFITAlAVLAA----WPVKFKPKL 122
Cdd:PRK12650 33 IFVAAAGLLLKELPPILDGDALTWSVTWIPDLLgngvdVNLALRADALSLFFALLALVIGA-VVFIYsaryLPRKKGNTS 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 123 FFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAiWGGKNRQYAATKFIIYTAGSSIFiLLAALAMGFYGTEIP 202
Cdd:PRK12650 112 FYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA-RSGSGGEAGSIRTLILTFFGGLT-LLAAVAIAATQTGTT 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 203 NFEfSHLAAQDFTQKFQILCYVGLLIAFGV--KLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQL--L 278
Cdd:PRK12650 190 SLS-GILHSDVWAEKPGLTTVVAVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdV 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 279 PAAHAqfapLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLV 358
Cdd:PRK12650 269 AVWNW----LLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLI 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 359 GATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGFVTDEVYTlPFRVIMASLAAIGVILT 438
Cdd:PRK12650 345 GVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGN-AGVVLLLVGAALGAVFT 423
|
...
gi 123554765 439 PIY 441
Cdd:PRK12650 424 FAY 426
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
39-483 |
6.67e-24 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 105.99 E-value: 6.67e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 39 KEVRWFALSIALTTFLITVGSYINGFDINNENVQLKENVSWLPDLGLTWSVGADGISMPLILLTSFITALAVLAAWPVKF 118
Cdd:PRK12646 24 RALAKYAGYIALVAPIISSIYFLIQIPSVAKLQYLSTSIPWMKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLS 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 119 K-----PKLFFFLILVMdGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIW-GGKNRQYAATK-FIIYTAGSSI----FI 187
Cdd:PRK12646 104 SrkdnlPRFYFYLTLFM-FSMIGIVLSDNTILMYVFWELTSVSSFLLISYWyNNGDSQFGAIQsFMITVFGGLAllvgFI 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 188 LLAALAMGFYGTEIpnFEFSHLAAQDFTQKFQILCyvgLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGG 267
Cdd:PRK12646 183 MLYIMTGTNNITEI--LGQADHIKNHGLFIPMIFM---FLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGI 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 268 YALLRFNAQLlpAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFV--LIGIGSFSSLGTSGAM---- 341
Cdd:PRK12646 258 FLLFRFTPLL--GLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMImaMVGIGGGYAQHQQDAIasiy 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 342 --------LQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGF 413
Cdd:PRK12646 336 vfvlfaalFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDAL 415
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 123554765 414 VTD---EVYTLPFRVIMASLAAIGVILTPIYLLSMLREIFFGKENPKLTEERKLidAEPREVYI---IACLLLPII 483
Cdd:PRK12646 416 TQTgqlSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVFWGKYDSKVFTKKNI--HEPWLFSLpslILMVLVPVI 489
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-433 |
7.68e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 101.85 E-value: 7.68e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 91 ADGISMPLILLTSFItALAVL----AAWP---VKFKPkLFFFLILVMDGGqiavFAVQDMLLFFLTWELELIPVYLLLAI 163
Cdd:PRK12666 78 LDRLSALMLLLTALL-ALAALlyalAGWDragPHFHA-LFQFQLMGLNGA----FLTGDLFNLFVFFEVLLAASYGLLLH 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 164 WGGKNRQYAATKFIIYT-AGSSIFILLAALAMGFYGT--------EIPnfefsHLAAQDftqkfQILCYVG---LLIAFG 231
Cdd:PRK12666 152 GSGRARVRAGLHYVAINlVASSLFLIGVGLIYGVTGTlnmadlaqRIA-----QLPAAD-----RALLEAGaalLLVVFL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 232 VKLPIVPLHTWLPDAHGEATAPVHMLLAgILLKMGGYALLRFNAQLLPA---AHAQFA-PLLIVLGVVNIIYAALTSFAQ 307
Cdd:PRK12666 222 IKAAMWPLNFWLPPAYAAASAPVAALFA-IMTKVGIYAILRLSTLLFGPeagASAGFGqDWLLPGGLATLAFGAIGVLAA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 308 RNLKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLV-------GATYDR------TKTLKLDEMS 374
Cdd:PRK12666 301 QRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLAdlverqrGAAADRlavtpeLYDLDEEEEE 380
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 123554765 375 GVGQK----MRIMFALWTACSLASLALPGMSGFVSELMVFTGFV----TDEVYTLPFRVIMASLAAI 433
Cdd:PRK12666 381 EVGVAipatMALLGLLFFICALALAGLPPLSGFLGKFALLQALLnppgAGAAWWLWALVLLSGLAAL 447
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
13-498 |
2.29e-22 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 101.16 E-value: 2.29e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 13 PWLSASILFPIGSAFVIPFFPDKGDGKEVRWFALSIALTTFLITVgSYIngfDINNENVQLKENVSWLPDLGLTWSVGAD 92
Cdd:PRK12645 2 SLLHIAILLPFIFALLIPFLYKYFKRIHTGWFVLPVPVVLFIYFL-SLI---PTTMSGNTVMKTLPWIPSLGINFTLYVD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 93 GISMPLILLTSFITALAVLAA--WPVKFKPKL---FFFLILVMdGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGK 167
Cdd:PRK12645 78 GLSLLFALLITGIGSLVVLYSiyYLSKKKEQLgnfYVYLLLFM-GAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYER 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 168 NR-QYAATKFIIYTAGSSI-----FILLAALAmgfyGTeipnFEFSHLAAQdfTQKFQ-----ILCYVGLLIAFGVKLPI 236
Cdd:PRK12645 157 EAsRYGAQKSMLITVFGGLsmlggFILLYIMT----GS----FSIREMIAN--ADEIQnsplfIPAMILILLGAFTKSAQ 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 237 VPLHTWLPDAHgEATAPVHMLL-AGILLKMGGYALLRFNAqlLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIA 315
Cdd:PRK12645 227 FPFYIWLPDAM-EAPTPVSAYLhSATMVKAGIYLVARFTP--IFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILA 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 316 YSSISHMGFV--LIGIGSFS-----------SLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRI 382
Cdd:PRK12645 304 FSTVSQLGLImsLLGIGAASlhyqgddskiyAAAITAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLGGLMTIMPI 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 383 MFALWTACSLASLALPGMSGFVSELMVFTGFVT----DEVYTLPFRVIMASLAAIGVILTPIYLLSMLREIFFGKENPKL 458
Cdd:PRK12645 384 TFTIALIGALSMAGLPPFNGFLSKEMFFESMLNateaNLFSLDTWGVLFPVIAWVASVFTFVYSIIFIFKTFFGKYKPEQ 463
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 123554765 459 TEErklidaEPREVYiIACLLLPII------GIGLYPRLVTESYLA 498
Cdd:PRK12645 464 LPK------KAHEAP-IGMLISPIIlaslvvVFGLFPNILTNSIIE 502
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
100-500 |
2.56e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 99.89 E-value: 2.56e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 100 LLTSFITALAVLAAW-------PVKFKPKLFFFLILVMDGGQIAVFAvqDMLLFFLTWELELIPVYLLLAIWGGKNRQYA 172
Cdd:PRK06589 90 LLIGFLWICALLYTPkylainnIDSSSRFLFFFNLTILIGVLIALSS--DLFTMFVCYELLTISTAFLIGHTRNNISLSG 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 173 ATKFIIYTAGSSIFILLAALAMGFYGTEIPNFEFSHLAAQDfTQKFQILCYVGLLIafgvKLPIVPLHTWLPDAHgEATA 252
Cdd:PRK06589 168 GYKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKN-QSIILLLMFIYGIA----KTAIFPVHSWLPAAM-VAHY 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 253 PVHMLL-AGILLKMGGYALLR-----FNAQLLPAAHAQFApLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL 326
Cdd:PRK06589 242 PVSALLhAVIVVKTGLFCIYKillyiFGLSYLQRIFAEFN-WLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLAL 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 327 IGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSE 406
Cdd:PRK06589 321 LSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISK 400
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 407 LMVFTGFVTDEVYTLPfrVIMASLAAIGVILTPIYLLSMLREIFFgkenPKLTEERKLIDAEPREVYIIACLLLPIIGIG 486
Cdd:PRK06589 401 FLILLAASEQNQPWLS--IIVMLVVIASSILSALYLLKILSSIYK----PSLSENSFITKSLPYLMQISVITCCCALTLF 474
|
410
....*....|....
gi 123554765 487 LYPRLVTESYLASI 500
Cdd:PRK06589 475 YFIQILIREFLAYI 488
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
12-491 |
4.50e-22 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 100.29 E-value: 4.50e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 12 FPWLSASILFPIGSAFVIPFFpDKGDGKEVRWFALSIALTTFLITvgSYINGFDINNENVQlkENVSWLPDLGLTWSVGA 91
Cdd:PRK12649 4 FNAIVLAIFLPFILAWTVPVL-EKVLKQRIGWFAAAIAFTSFALI--AQVAPEVIHGTIIT--GSISWLPSAGVEFSIYA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 92 DGISMPLILLTSFITALAVLAAWPVKFK----PKLFFFLILVMdGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGK 167
Cdd:PRK12649 79 DGLAVLIGLIASGIGVIIMSYSNGYMSHkedlPRYYQYLLLFM-GSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHR 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 168 NRQ-YAATKFIIYTAGSSIFILLAALAMG-FYGT-EIPN-FEFSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWL 243
Cdd:PRK12649 158 PESvYGATKSLLITAGGGLFMFAGFLLLHvITGTyDIATiLQDSELIENIKGHPLFLITLILIFIGAAAKSAQGPFYIWL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 244 PDAHgEATAPVHMLL-AGILLKMGGYALLRFNAqLLPAAHAQFApLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHM 322
Cdd:PRK12649 238 PNAM-EAPTPVSAFLhSATMVKAGVYLVARIHP-IFSGTEAWFI-LVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 323 GFVLIGIGSFS----SLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALP 398
Cdd:PRK12649 315 AYLMTMYGYTTyhepGLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIP 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 399 GMSGFVSELMVF-TGFVTDEVYTLPFRVIMASLAAIGVILTPIYLLSMLREIFFGKENPKLTEERklIDAEPREVYIIAC 477
Cdd:PRK12649 395 PLNGFLSKEMFYeTSVEMGALIGGPFTIIIPAVAVLGGVFTFAYSIKLIDGIFLGERTHDHLPHH--IHEAPYVMLIPAA 472
|
490
....*....|....*
gi 123554765 478 LLLP-IIGIGLYPRL 491
Cdd:PRK12649 473 FLAGlVILFGLVPSI 487
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
138-413 |
8.33e-21 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 94.59 E-value: 8.33e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 138 FAVQDMLLFFLTWELELIPVYLLLAIWGGKnrqyaatkfiIYTAGSSIFILLAAL--AMGFYGTEIPNFEFSHLAAQDFt 215
Cdd:MTH00094 79 FVSSNMLMLYMFFELSMFPILIMILGYGSQ----------IEKINSSYYLLFYAAffSFPFLFVYLKNFFFFSLCYFDF- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 216 qKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRfnaqLLPAAHAQFAPLLIVLGVV 295
Cdd:MTH00094 148 -FLSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR----ILGSLNFVYNNFWIIFSLL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 296 NIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSG 375
Cdd:MTH00094 223 GMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNS 302
|
250 260 270
....*....|....*....|....*....|....*...
gi 123554765 376 VGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGF 413
Cdd:MTH00094 303 FFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNS 340
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
188-413 |
2.73e-19 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 91.43 E-value: 2.73e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 188 LLAALAMGFYGTEIPNFEFSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGG 267
Cdd:PRK08042 148 LLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGL 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 268 YALLRFNAqLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSS-----------LG 336
Cdd:PRK08042 228 LGILTLSL-LGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTgialeqpaliaLG 306
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 123554765 337 TSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGF 413
Cdd:PRK08042 307 LVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSF 383
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
73-461 |
1.80e-18 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 88.82 E-value: 1.80e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 73 LKENVSWLPDLGLTWSVGADGISMPLILLTSFITALAVLAAWP-VKFKPKL--FFFLILVMDGGQIAVFAVQDMLLFFLT 149
Cdd:PRK12647 44 VRGGYAWVPSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGyLKGHPDLgrFYSYILLFMASMLGLVLSDNLITLFVF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 150 WELELIPVYLLLaiwGGKNRQYAATKF----IIYTAGSSIFILLAALAMGFY-GTeipnFEFSHLAAQDFTQKFQILcYV 224
Cdd:PRK12647 124 WELTSITSFLLI---GFNHEREAARRAalqaLLVTGGGGLALLAGLILLGNVtGT----YSLSELLASGDVIREHPL-YL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 225 GLLI-----AFgVKLPIVPLHTWLPDAHgEATAPVHMLL-AGILLKMGGYALLRFNAQLlpAAHAQFAPLLIVLGVVNII 298
Cdd:PRK12647 196 AILLlvlggAF-TKSAQFPFHFWLPNAM-EAPTPVSAYLhSATMVKAGIYLLARLNPVL--GGTPLWQTILPLFGGLTML 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 299 YAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQ 378
Cdd:PRK12647 272 TGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRR 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 379 KMRIMFALWTACSLASLALPGMSGFVSELMVFTGFVTDEVYTLPFRVIMASLAAIGVILTpiyLLSMLREiFFGK--ENP 456
Cdd:PRK12647 352 AMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVLGNALMVAVA---FLVGIKP-FLGKlvETP 427
|
....*
gi 123554765 457 KLTEE 461
Cdd:PRK12647 428 KHPHE 432
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
123-492 |
1.15e-17 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 85.77 E-value: 1.15e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 123 FFFLILV-MDGGQIAVFAVqDMLLFFLTWELELIPVYLLLAIWGGKNR-QYAATK-FIIYTAGSSIFILLAALAMGFYGT 199
Cdd:TIGR01770 104 FYILLLFaLLGIFLLVSSN-DLLSIYLGLELQSLCFYVLAGLKRKSRFsTEAGLKyFILGAFSSGLLLFGISLIYGFTGS 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 200 eipnFEFSHLAAQDFTQKFQI-LCYVGL---LIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAgILLKMGGYA-LLRFN 274
Cdd:TIGR01770 183 ----LNFEDLLLFLSNGMLNIsLLLLGIvliLVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFS-IVPKIAIFAvFLRLF 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 275 AQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASL 354
Cdd:TIGR01770 258 LYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGA 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 355 FFLVGATYDRTKT--LKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGFVTDEVYTLPFRVIMASLAA 432
Cdd:TIGR01770 338 FGVLSLLRSYKDEwiEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIG 417
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 433 IGviltpiYLLSMLREIFFgkenPKLTEERKLIDAEPREVYIIACLLLPIIGIGLYPRLV 492
Cdd:TIGR01770 418 AF------YYLRVVKVMYF----DKPERRIPSNPQSKAQSLLLSISALFILFLGLFPSLI 467
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
15-454 |
6.00e-17 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 83.87 E-value: 6.00e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 15 LSASILFPIGSAFVIPFFPDKGDGKEVRWFALSIALTTFLITVgSYINGFDINNENVQLKENV-SWLP--DLGLTWSVGA 91
Cdd:TIGR01974 3 IFLIVFLPLIGFLIAGLFGRRIGERVSGIIGIGSVGLSAALSA-FVFVDFFLNGEGEAFTQSLfPWISvgGFQVDFGLRL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 92 DGISMPLILLTSFITALA-VLAAWPVKFKPK-----------LFFFLILVMdggqiavfaVQDMLLFFLTWELELIPVYL 159
Cdd:TIGR01974 82 DGLSLTMLVVVTGVGSLVhIYSIGYMAHDEGysrffaylnlfTFSMLMLVL---------ADNFLQLFFGWEGVGLCSYL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 160 LLAIWGGK-NRQYAATK-FIIYTAGSSIFILLAALAMGFYGTeipnFEFSHLAAQDFTQKFQILCYVGLLIAFGV--KLP 235
Cdd:TIGR01974 153 LIGFWYKKpSANNAAIKaFVVNRVGDFGLLLGIFLIFWYFGT----LNFQEVFALAPGAFFSALTLICLLLFIGAmgKSA 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 236 IVPLHTWLPDAHgEATAPVHMLL-AGILLKMGGYALLRFNAQLLPAAHAQFapLLIVLGVVNIIYAALTSFAQRNLKRKI 314
Cdd:TIGR01974 229 QLPLHTWLPDAM-EGPTPVSALIhAATMVTAGVYLVARTSPLFELSPTALY--LVTIIGAITALFAATVALVQNDIKRIL 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 315 AYSSISHMG--FVLIGIGSFSSlgtsgAMLQMVSHGLIGASLFFLVGATYDRTK-TLKLDEMSGVGQKMRIMFALWTACS 391
Cdd:TIGR01974 306 AYSTMSQLGymFLALGVGAYAA-----AIFHLMTHAFFKALLFLGAGSVIHAMHhEQDIRKMGGLRKKMPVTYITFLIGS 380
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 123554765 392 LASLALPGMSGFVSElmvftGFVTDEVYTLPFRVIMASLAAIGVILTPIYLLSMLREIFFGKE 454
Cdd:TIGR01974 381 LALIGFPGFAGFFSK-----DLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKE 438
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-500 |
1.50e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 79.01 E-value: 1.50e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 79 WLPDLGLTWSVgaDGISMPLILLTSFITALAVLAAW-------PVKFKPKlFFFLILVMDGGQIAVFAVQDMLLFFLTWE 151
Cdd:PRK12662 64 WGPPYGIELRV--DILSATMLVLVNFIAVMSVLYGIypnrkeiSVNKIPS-FYSAFLLCLGGLLGILVSNDVFNIYVFLE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 152 LELIPVYLLLAIWGGKNRQYAATKF-IIYTAGSSIFILLAALAMGFYGT-EIPN-FEFSHLAAQDFTQKFQILC-YVGLL 227
Cdd:PRK12662 141 ISSISSYVLVAMGRDKKALVAAFEYlIIGTIGATFYLIGIGFLYAITGTlNMGDmFLIIQDLPTNRAIQIGVLFiMVGLF 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 228 IafgvKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLR-----FNAQLLpAAHAQFAPLLIVLGVVNIIYAAL 302
Cdd:PRK12662 221 I----KAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRivydvFKANFV-FTTLPFNNVFMILAALAIVFGSV 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 303 TSFAQRNLKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRI 382
Cdd:PRK12662 296 LAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPK 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 383 MFALWTACSLASLALPGMSGFVSELMVFTGFVTDEvytlpFRVIMASLaAIGVILTPIYLLSMLREIFFgkENPKLTEER 462
Cdd:PRK12662 376 ITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSN-----AWIGLVVL-LVGSGLSVIYVWKIVEALYF--ESRMVESKA 447
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 123554765 463 KLIDAEPREVYIIACLLLPIIGI--GLYP---RLVTESYLASI 500
Cdd:PRK12662 448 NDKAFKTPNAMVLCIWIMAILSIivGIYPiplTLISEKIAFDL 490
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
19-499 |
3.71e-14 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 75.61 E-value: 3.71e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 19 ILFPIGSAFVIPFFPDKGDGKEVrWFALSIALTTFLITVGSYINGFDinNENVQlkENVSWLPDLGLTWSVGADGISMPL 98
Cdd:PRK12648 7 VLLPFLGALLAALLPRNARNAEA-WLAGLVALAALVLLALLYPAVAA--GEVIR--AEIEWLPALGLNLSLRLDGLAWLF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 99 ILLTSFITALAVLAAW-------PVkfkPKLFFFLILVMdGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKN--R 169
Cdd:PRK12648 82 ALLILGIGLLVVLYARyylspadPV---PRFFSFLLLFM-GAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRAdaR 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 170 QYAATKFIIYTAGSsiFILLAALAMgfYGTEIPNFEFSH-LAAQDFTQKFQILCYVGLLIAFGV--KLPIVPLHTWLPDA 246
Cdd:PRK12648 158 RGARMALTVTGAGG--LALLAGVLL--LGHIVGSYDLDVvLAAGDLIRAHPLYPPALVLILLGAftKSAQFPFHFWLPHA 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 247 HGEATaPV----H---MLLAGILLkmggyaLLRFNAQLlpAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSI 319
Cdd:PRK12648 234 MAAPT-PVsaylHsatMVKAGVFL------LARLWPVL--AGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTI 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 320 SHMGFV--LIGIGsfSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLAL 397
Cdd:PRK12648 305 SHLGLItlLLGLG--SPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMPITATLAMVAAAAMAGV 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 398 PGMSGFVSELMVFTGFVtDEVYTLPFRVIMASLAAIGVILTPIYLLSMLREIFFGKENPKLTEE-------RKLidaePR 470
Cdd:PRK12648 383 PLLNGFLSKEMFFAETL-DTHLLGSLDWLLPVAATLAGAFSVAYSLRFIHDVFFGPPPDDLPKTphepprwMRA----PV 457
|
490 500
....*....|....*....|....*....
gi 123554765 471 EVYIIACLLlpiigIGLYPRLVTESYLAS 499
Cdd:PRK12648 458 ELLVLLCLL-----VGIFPALTVGPLLAA 481
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
133-493 |
7.02e-13 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 70.06 E-value: 7.02e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 133 GQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNRQY-AATKFIIYTAGSSIFILLA-ALAMGFYG-TEIPNFEFSHL 209
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAeAGLKYFVLGALSSGLFLFGcALLCGTTGgLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 210 AAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAgILLKMGGYALLrfnAQLLPAAHaqfapLL 289
Cdd:MTH00196 85 SGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLGIFSIL---VSIGLNVN-----IL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 290 IVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGI--GSFSSLGTSgaMLQMVSHgLIGASLFFLVGATYDRTKT 367
Cdd:MTH00196 156 LIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeiGSFESIQAS--LVYLFIY-IIMSICVFSIILALNVYKN 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 368 LkLDEMSGVGQKMRImFALWTACSLASLA-LPGMSGFVSELMVFTGFVTDEVYTLPFRVIMASLAAIGviltpiYLLSML 446
Cdd:MTH00196 233 L-IIEFSGLSRRLPI-LAITLALTFLSIAgIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGV------YYVRIV 304
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 123554765 447 REIFFGKENPKLTEErKLIDAEPREVYIIACLllpiIGIGLYPRLVT 493
Cdd:MTH00196 305 KILFFQANSFLLIST-KILKKENKINLRKALL----IGFSLYLILFT 346
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
141-433 |
7.85e-13 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 70.85 E-value: 7.85e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 141 QDMLLFFLTWELELIPVYLLLAIWGGKNRQY-AATKFI-IYTAGSSIFILLAALAMGFYG--TEIPNFEFSHLAAQDFTQ 216
Cdd:PRK02504 130 TELVMIFISLETLSIASYLLTGYMKRDPRSNeAALKYLlIGAASSAIFLYGSSLLYGLSGgsTQLSAIALALITSPSLGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 217 kfqILCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAgILLKMGGYAL-LRFNAQLLPAAHAQFAPLLIVLGVV 295
Cdd:PRK02504 210 ---ALALVFVIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFLS-VGSKAAGFALaIRLLVTAFPSFDEQWKLLFTALAIL 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 296 NIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSG 375
Cdd:PRK02504 286 SMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMVFYLLAYLFMNLGAFACVILFSLRTGTDQISDYAG 365
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 123554765 376 VGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGFVTDEVYTLPFRVIMASLAAI 433
Cdd:PRK02504 366 LYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISI 423
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
98-503 |
3.15e-12 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 68.52 E-value: 3.15e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 98 LILLTSFITALAVLAAWPVKFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWE-LELIPVYLLLAIWGGKNRQYAATKF 176
Cdd:PRK06277 77 IIFVLSLIASLVLITGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEiAAIVQVGLVIASGTEEAYKAALKYM 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 177 IIYTAGSSIFILLAALAMGFYG----TEIPNFEFSHLAAQDFTQKFQILcYVGLLIAFGvkLPivPLHTWLPDAHGEATA 252
Cdd:PRK06277 157 ILGNVAGSILLLGIGFLLASTGtlniTDIHNALLVNPTSPVIYGGLLLL-IFGLLYGSG--LP--PFHTIKSDIYAKAKP 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 253 PVHMLLAG---ILLKMGGYALLRFNAQL--LPAAHAqfapLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLI 327
Cdd:PRK06277 232 FGSALLQTfskFVLVALMLVIFKLFGGLsyFPSAQG----VLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAA 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 328 GIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSEL 407
Cdd:PRK06277 308 GLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKL 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 408 MVFTGfvtdevytlPFRVIMASLAAIGVILTPIYLLSMLREIFFGKENPKlTEERKLIDAEPRE--VYIIACLLLPIIGI 485
Cdd:PRK06277 388 MLAQA---------AMQANMPELAIIMIIVSIGTFVSMMKAFYLIYLKPK-PEELEYKNKKVPKyaVFSLAVLTILCIIL 457
|
410
....*....|....*...
gi 123554765 486 GLYPRLVTESYLASINNL 503
Cdd:PRK06277 458 GLFPDLVTNYLYPFANEI 475
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
144-468 |
6.70e-12 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 67.73 E-value: 6.70e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 144 LLFFLTWELELIPVYLLLAIwgGKNRQY---AATKFIIYTAGSS-IFILLAALAMGFYGtEIPNFEFSHLAAQDFTQkfq 219
Cdd:MTH00199 120 LSIYLAIELQTLTLFILVAL--KRDSAYsteAGLKYFVLGAVSSgLFLFGCALLYGLTG-ETSIQGINSILTGDVGK--- 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 220 ILCYVGLLIafgvKLPIVPLHTWLPDAHGEATAPVHMLLAgILLKMGGYALLrfnaqllpaahAQFAP---LLIVLGVVN 296
Cdd:MTH00199 194 ILITISLLF----KLSAAPFHMWAPDVYEGAPTITTALLA-TVPKIGVFSIL-----------VQIGPvtnVVLICAVLS 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 297 IIYAALTSFAQRNLKRKIAYSSISHMGFVLIG--IGSFSSLGTSgaMLQMVSHGLIGASLFFLVgATYDRTKTLkLDEMS 374
Cdd:MTH00199 258 IIYGAIGALNQTKIKRLLAYSGIGHMGFILFGvaIGSFESIQAS--LIYMIIYVIMSICSFSII-LSLKLTKGL-IVEVS 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 375 GVGQKMRIMfALWTACSLASLA-LPGMSGFVSELMVFTGFVTDEVYTLPFRVIMASLAAiGViltpiYLLSMLREIFFGK 453
Cdd:MTH00199 334 GLSRKNPVI-ALTLALTFLSIAgIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIA-GV-----YYVRVVQIIYFQA 406
|
330
....*....|....*
gi 123554765 454 ENPKLTEERKLIDAE 468
Cdd:MTH00199 407 DYSILIWQKVLKKEE 421
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
19-410 |
2.96e-11 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 66.14 E-value: 2.96e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 19 ILFPIGSAFVIPFFP----DKGDGKEVRWFALSIALTTFLITVGSYINGFDINNENVQLKENVSWLPDLGLTWsvgaDGI 94
Cdd:MTH00032 6 LLLPFINAFLLGFFGrligTIGSGILSTICMGSSTLIALFLAYEVLINDAVVHIELYKWIESEIFITHIGLLY----DTL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 95 SMPLILLTSFITALAVLAAWPV----KFKPK------LFFFLILVMdggqiavFAVQDMLLFFLTWELELIPVYLLLAIW 164
Cdd:MTH00032 82 SVTMLLVISSISTLVHIYSTSYmsddPHVPRflcylsLFTFLMMVL-------VTSDNYLQLFIGWEGVGVCSYLLVAFW 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 165 GGK-NRQYAATKFIIYTAGSSIFILLA--------------ALAMGFYGTEIpnFEFSHLAAQDFTQKFQILCYVGLLIA 229
Cdd:MTH00032 155 TTRiQANKAAIKAIVVNRVGDVGVILGmvliyktigsldflTFNGGSVGSGI--MDRGYYGGGAYESPLAPFAIIGILLL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 230 FGV--KLPIVPLHTWLPDAHgEATAPVHMLLAGILLKMGGYALLRFNAQLLpaAHAQFAPLLI-VLGVVNIIYAALTSFA 306
Cdd:MTH00032 233 IGCigKSAQLGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLMIRSFPLF--EKAPLTLLIItIFGALTAFFAATVGLV 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 307 QRNLKRKIAYSSISHMGFVLIGIGSFSSLGTSgaMLQMVSHGLIGASLFFLVGATYDRTKTLKLD--EMSGVGQKMRIMF 384
Cdd:MTH00032 310 QNDLKKVIAYSTCSQLGYMVLIIGIEGSHNVG--LFHLVNHAFFKALLFLSAGSVIHSTTVDEQDmrKMGGLIHSIPFTY 387
|
410 420
....*....|....*....|....*.
gi 123554765 385 ALWTACSLASLALPGMSGFVSELMVF 410
Cdd:MTH00032 388 TMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
238-483 |
7.78e-11 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 64.55 E-value: 7.78e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 238 PLHTWLPDAHgEATAPVHMLLAGILLKMGGYALLRFNA--QLLPAAhaqfAPLLIVLGVVNIIYAALTSFAQRNLKRKIA 315
Cdd:PRK07390 239 PLHLWLDEAM-EGPNPASILRNSVVVATGAWVLIKLQPvlALSPVA----LTVLIVIGTVTAIGASLVAIAQIDIKRALS 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 316 YSSISHMGFVLIGIGsfssLG-TSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLAS 394
Cdd:PRK07390 314 YSTSAYLGLVFIAVG----LQqPDIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGL 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 395 LALPGMSGFVSELMVFTGFVTDEVYTLPFRVIMASLAAIGviLTPIYllsmlREIFFGKENPKL--TEERKLIDAEPREV 472
Cdd:PRK07390 390 VALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFN--LTRVF-----RLVFLGKPQQKTrrSPEVLWPMALPMVI 462
|
250
....*....|.
gi 123554765 473 YIIACLLLPII 483
Cdd:PRK07390 463 LAGFTLHLPLL 473
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
92-363 |
3.75e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 61.86 E-value: 3.75e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 92 DGISMPLILLTSFItALAVLAAWPVKFKPKLFFFLILVMdGGQIAVFAVQDMLLFFLTWELELIP-VYLLLAIWGGKNRQ 170
Cdd:MTH00062 44 DSLSFYLILLVLFL-GLYSQVMFYNLLSGVSRFFLFLSL-IFSILCFCVNNSLLFWFFYELSIIPlLYLLFSESPYSERY 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 171 YAATKFIIYTAGSSIFILLAALAMGFYGTEipnFEFSHLAAQDFTQkfqILCYVGLLIAFGVKLPIVPLHTWLPDAHGEA 250
Cdd:MTH00062 122 LASWYFLGYLLLTSLPLLLCLLYLSLVNGS---FNFSDWGSDDSVS---LIVYYVLSFMFITKVPLFPFHTWLPIVHAEA 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 251 TAPVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIVLGVVNIIyaalTSFAQRNLKRKIAYSSISHM--GFVLIG 328
Cdd:MTH00062 196 SSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLI----TACSELDGKRWLAFLSLSHIlvPVLGLF 271
|
250 260 270
....*....|....*....|....*....|....*
gi 123554765 329 IGSFSSLGTSgaMLQMVSHGLIGASLFFLVGATYD 363
Cdd:MTH00062 272 VGDWSSINLS--FFYCLGHGLSAGLVFLLLWCFYE 304
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
117-430 |
5.12e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 61.06 E-value: 5.12e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 117 KFKPKLFFFLILVMDGGQIAVFAVQdmllFFLTW---ELELIPVYLLLAIWGGKNRQYAATKFIIYTAGSSIFILLAALA 193
Cdd:MTH00144 1 MSSPSNLLFLFLMVMGTLLSLSSSH----WLGVWvglEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLI 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 194 MGFYGteipnfefshlaaqdftqkFQILCYVGLLIAFGVKLPIVPLHTWLPdahgEATAPVHMLLAGILLKMGGYALLRF 273
Cdd:MTH00144 77 MYNLS-------------------FSWFSMSLLLLGLCLKLGLFPFHFWVP----SVMAGLSWLSCFLLLTWQKVAPLFL 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 274 NAQLLPAAhaQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVShgligaS 353
Cdd:MTH00144 134 LSNFLDLY--WLAYLLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVS------S 205
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 123554765 354 LFFLVGATYDRTKTLKldemSGVGQKMRIMFALWTACSLASLA-LPGMSGFVSELMVFTGFVTDEVYTLPFRVIMASL 430
Cdd:MTH00144 206 GFLFFSLWSGDSGSMK----DLGSLKPSYKTGLSIISLLLSLGgLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSL 279
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
80-409 |
8.53e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 61.28 E-value: 8.53e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 80 LPDLGLTWSVGADGISMPLILLTSFITALAVLAAWPVK---FKPKLFFFLILVmdgGQIAVFAVQDMLLFFLTWELELIP 156
Cdd:PRK12664 22 LPLLLYDWSEPVYNLDLVLFIVLSFSLALIFLYILPIKnmrFSEMLCYLLYYI---SSIAAISSSSLTLVVIGFEFMALS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 157 VYLLLAIWGGKNR-----QYAATKFIiytagsSIFILLAALAMGFYGteipnfefshlaaQDFTQKFQILCYVGLLIafg 231
Cdd:PRK12664 99 ALMIIAAGCPGGNigafiHYACVHFF------SGVLLLVGASGQAQN-------------GQYTGYCKLLFMLGLLI--- 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 232 vKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNaqllpaahaQFAPLLIVLGVVNIIYAALTSFAQRNLK 311
Cdd:PRK12664 157 -NCACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLFF---------SGEEILLFLGIITAIYGIIFASLEQNIR 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 312 RKIAYSSISHMGFVLIGIG-SFSSLGTSGAMLQMVSHGLIGASLFFLVG-ATYDRTKTLKLDEMSGVGQkmriMFALWTA 389
Cdd:PRK12664 227 RLLCYNVVGQMGLLIIAIGfSGSSGVAIGILILQIVLSVVYQTLLFMVAdSVINRTRKFNLNRVGGLFK----MSLEAMC 302
|
330 340
....*....|....*....|...
gi 123554765 390 CSLASL---ALPGMSGFVSELMV 409
Cdd:PRK12664 303 CIIAILnmgAFPGTAGFVSKSLI 325
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
99-332 |
1.24e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 60.57 E-value: 1.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 99 ILLTSFITALAVLAAWPVKFKPKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWggKNRQYAATKFII 178
Cdd:PRK06459 50 SIISTIVWILASLYSIEYDHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT--KKNKRPAFVFMA 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 179 YTAGSSIFILlAALAMGFYGTEIPNFEFshlaaqdftqkfqILCYVGLLIA---FGVKLPIVPLH--TWLPDAHGEATAP 253
Cdd:PRK06459 128 FGELSTVLIL-AGFAWAFIISGTTNFSY-------------LPSPVPLILAsfgFIIKMGMMPFLvsEWLPIAHGNAPSN 193
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 123554765 254 VHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSF 332
Cdd:PRK06459 194 FSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLY 272
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
124-338 |
2.21e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 59.87 E-value: 2.21e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 124 FFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNRQYAAT---------KFIIYTAGSSIFILLA-ALA 193
Cdd:MTH00198 191 FALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHFPSPgntppesglKYWILGAMSSGFYLFGcALY 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 194 MGFYGTE--IPNFEFSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILlkmggyall 271
Cdd:MTH00198 271 FGFTGNEgmLGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIP--------- 341
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 123554765 272 RFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGI--GSFSSLGTS 338
Cdd:MTH00198 342 KFTVYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVsaGTYESLQAS 410
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
120-430 |
7.45e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 57.67 E-value: 7.45e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 120 PKLFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNRQYAATKFIIYTAGSSIFILLAALAMGFYGT 199
Cdd:MTH00200 3 PLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 200 EIpnfefshlaaqDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHGEATaPVHMLLAGILLKMGGYALLRFNAQLLP 279
Cdd:MTH00200 83 QW-----------GISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLS-LQTGLILSTWQKLAPFALLIQLAPALN 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 280 AahaqfaPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIgsfsSLGTSGAMLQMVSHGLIGASLFFLVg 359
Cdd:MTH00200 151 S------NILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGL----VYSPNLALLYLLLYVIITLTVFLLL- 219
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 123554765 360 aTYDRTKTLKLDEMSGVGQKMRIMFALWTACSLAslALPGMSGFVSELMVFTGFVTDEVYTLPFRVIMASL 430
Cdd:MTH00200 220 -NLLNSTKINSLSSSKTKNPILSMLLGLTLLSLG--GLPPLTGFFPKWLILQELSKQGLFIYATILLLGSL 287
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
122-452 |
1.33e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 57.27 E-value: 1.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 122 LFFFLILVMDGgqiavfavqDMLLFFLTWELELIPVYLLLAIWGG-KNRQYAATKFIIYTAGSSIFILLAA--LAMGFYG 198
Cdd:MTH00211 120 LIFMLILVSAN---------NLFQLFIGWEGVGIMSFLLISWWYGrSDANTAALQAVIYNRIGDIGLLLSMvwLLLNLNS 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 199 TEIPNFEFShlaaqdftQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHgEATAPVHMLL-------AGILLkmggyaLL 271
Cdd:MTH00211 191 WEISQLFIL--------NLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAM-EGPTPVSALLhsstmvvAGVFL------LI 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 272 RFNAQLLPAAHAQFAPLLivLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIG-SFSSLgtsgAMLQMVSHGLI 350
Cdd:MTH00211 256 RLSPLFQNNQLILGAVLL--LGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGlNQPQL----AFLHICTHAFF 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 351 GASLFFLVGAT-YDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGFVTDEVYtlpfrVIMAS 429
Cdd:MTH00211 330 KAMLFMCSGSIiHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLN-----AWALL 404
|
330 340
....*....|....*....|...
gi 123554765 430 LAAIGVILTPIYLLSMLREIFFG 452
Cdd:MTH00211 405 LTLLATSLTAAYSFRLIFLSLGG 427
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
122-457 |
6.27e-08 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 55.47 E-value: 6.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 122 LFFFLILVMdggqiavFAVQDMLLFFLTWELELIPVYLLLAIWGGK---NRqyAATKFIIYTAGSSIFILLAALAM-GFY 197
Cdd:MTH00020 119 LFTFLMVVL-------VTSDNYLQLFIGWEGVGLCSYLLINFWLTRieaNK--AAIKAMLVNRVGDIGLLLAMFLLwDRF 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 198 GTeipnFEFSHLAAQDFTQKFQILCYVGLLIAFGV--KLPIVPLHTWLPDAHgEATAPVHMLL-AGILLKMGGYALLRFN 274
Cdd:MTH00020 190 GS----LDFSSVFNMVVSAPSSDITLICLFLFIGAvgKSAQLGLHTWLPDAM-EGPTPVSALIhAATMVTAGVFLLIRSS 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 275 AQLLPAAHAQFapLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIG-SFSSLGtsgaMLQMVSHGLIGAS 353
Cdd:MTH00020 265 PLFEQAPLALI--IVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGlSHYSIS----LFHLMNHAFFKAL 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 354 LFFLVG----ATYDRTKTLKldeMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTgfVTDEVYTLPFRVIMAS 429
Cdd:MTH00020 339 LFLSAGsvihALSDEQDMRK---MGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILE--LAFGQYYLIFAYWLGC 413
|
330 340
....*....|....*....|....*...
gi 123554765 430 LAAigvILTPIYLLSMLREIFFGKENPK 457
Cdd:MTH00020 414 FSA---LLTAFYSIRLIYLTFLSNTNLK 438
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
141-405 |
6.31e-08 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 55.09 E-value: 6.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 141 QDMLLFFLTWELELIPVYLLLAIWGGKNR-QYAATKFIIYTAGSSIFILLAA-LAMGFYGTEIPNFEFSHLAAQDFTQKF 218
Cdd:PRK08168 120 DHLLVLIAAWAAISLALHRLLCFYPDRPFaRLAAHKKFIADRLAELLLLAAAaLAYLEVGSLSLSALWAHLAAQGASPSL 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 219 QIlcyVGLLIAFGV--KLPIVPLHTWLPDAHgEATAPVHMLLAGILLKMGGYALLRFnAQLLPAAHAQFApLLIVLGVVN 296
Cdd:PRK08168 200 QA---AALLLVLAVilKTAQLPVHGWLIQVM-EAPTPVSALLHAGVVNLGGFVLIRF-APLLEQAPPARW-LLVLVGLAT 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 297 IIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGsfssLGT-SGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSG 375
Cdd:PRK08168 274 AVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECG----LGLyELALLHLVAHSLYKAHAFLSASEAVRDTRLRRLQGPQS 349
|
250 260 270
....*....|....*....|....*....|
gi 123554765 376 VGQKMRIMFALwtACSLASLALPGMSGFVS 405
Cdd:PRK08168 350 AAGVVSLLLAP--LLSAALVLLLQSLLPLG 377
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
231-329 |
3.16e-07 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 53.08 E-value: 3.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 231 GVKLPIVPLHTWLPDAHGEATAPVHMLLAgILLKMGGYALL-RFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRN 309
Cdd:CHL00049 225 GFKLSLAPFHQWTPDVYEGSPTPVVAFLS-VTSKVAASALAtRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTS 303
|
90 100
....*....|....*....|
gi 123554765 310 LKRKIAYSSISHMGFVLIGI 329
Cdd:CHL00049 304 MKRMLAYSSIGQIGYVIIGI 323
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
237-454 |
7.43e-07 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 52.08 E-value: 7.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 237 VPLHTWLPDAHgEATAPV----H---MLLAGILL--KMGGYALLRFNAQLLPAahaqfaplliVLGVVNIIYAALTSFAQ 307
Cdd:PRK06590 234 FPLHTWLPDAM-EGPTPVsaliHaatMVTAGVYLvaRMSPLFELSPEALLFVA----------IVGAVTALFAAFIGLVQ 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 308 RNLKRKIAYSSISHMG--FVLIGIGSFSSlgtsgAMLQMVSHGLIGASLFFLVG----ATYDrtkTLKLDEMSGVGQKMR 381
Cdd:PRK06590 303 TDIKRVLAYSTMSQLGymFLALGVGAYAA-----AIFHLMTHAFFKALLFLGAGsvihAMHH---EQDIRKMGGLRKKMP 374
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 123554765 382 IMFALWTACSLASLALPGMSGFVSElmvftgfvtDE----VYTLPFRVIMAsLAAIGVILTPIYLLSMLREIFFGKE 454
Cdd:PRK06590 375 VTYATFLIGTLALIGIPPFAGFFSK---------DEileaAFANGHINLFV-AGLVGAFLTAFYSFRLIFLVFHGKE 441
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
124-430 |
1.48e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 50.06 E-value: 1.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 124 FFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNRQYAATKFIIYTAGSSIFILLAALAMGFygtEIPN 203
Cdd:MTH00197 1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFS---NLYL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 204 FEFSHLaaqdftqkfqiLCYVGLLiafgVKLPIVPLHTWLPDAHGEATAPVHMLLAgILLKMGGYALLRFNAQLLPaaha 283
Cdd:MTH00197 78 SLLSVV-----------LVILGLL----LKLGAFPFHFWVPSVMESLSWFNCFLLA-TWQKLAPLLILAFNSSSFM---- 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 284 qfapLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSSLGtsgaMLQMVSHGLIGASLFFLvgatYD 363
Cdd:MTH00197 138 ----GLLICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIF----MLYYLIYFVIMFMLFLF----LS 205
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 123554765 364 RTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGFVTDEVYTLPFRVIMASL 430
Cdd:MTH00197 206 KNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTC 272
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
238-334 |
3.20e-05 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 46.81 E-value: 3.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 238 PLHTWLPDAHGEAT---APVH---MLLAGILLKmggyallrfnAQLLPaahaqfapLLIVL----------GVVNIIYAA 301
Cdd:CHL00025 245 PLHVWLPDAMEGPTpisALIHaatMVAAGIFLV----------ARLLP--------LFIVIpyimnlisliGIITALLGA 306
|
90 100 110
....*....|....*....|....*....|....*
gi 123554765 302 LTSFAQRNLKRKIAYSSISHMGFVLI--GIGSFSS 334
Cdd:CHL00025 307 TLALAQKDIKRGLAYSTMSQLGYMMLalGIGSYRA 341
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
122-330 |
3.43e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 46.50 E-value: 3.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 122 LFFFLILVmdggqiavfAVQDMLLFFLTWELELIPVYLLLAIWGGKNR-QYAATKFIIYT-AGSSIFILLAALAMGFYGT 199
Cdd:MTH00208 148 LLNMLILT---------SSNNLFLLFIGWEGVGFLSFLLISWWTTRNDaNSSALQAVIYNrIGDIGIILFLSLSLINFNS 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 200 EIPNfEFSHLAAQDFTQKFQILcyVGLLIAFGVKLPIVPLHTWLPDAHgEATAPVHMLL-------AGILLkmggyaLLR 272
Cdd:MTH00208 219 WNLN-EILSLNNSNSFLINILL--FGILLAAAGKSAQFGLHPWLPAAM-EGPTPVSALLhsstmvvAGVFL------LIR 288
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 123554765 273 FNAqlLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIG 330
Cdd:MTH00208 289 TSP--LISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIG 344
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
212-409 |
5.07e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 45.91 E-value: 5.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 212 QDFTQKFQILCyvgLLIAFGVKLPIVPLHTWLPDAHGEATaPVHMLL-AGILLKMGGYALLRFNAQLlpAAHAQFAPLLI 290
Cdd:MTH00207 174 QTDMNNYIALS---IMIAAMTKSAQMPFSSWLPAAMAAPT-PVSALVhSSTLVTAGVFLLIRFYPFL--SSTYWFNPALL 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 291 VLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIG-SFSSLgtsgAMLQMVSHGLIGASLFFLVGAtydrtktlk 369
Cdd:MTH00207 248 LTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGlGMPKL----ALFHLITHALFKALLFVCAGS--------- 314
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 123554765 370 LDEMSGVGQKMRIMFALW------TACSL-ASLAL---PGMSGFVSELMV 409
Cdd:MTH00207 315 LIHSHHHSQDLRTMGNLTnqmpltTSCLLiANLALcgsPFLSGFYSKDLI 364
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
226-430 |
7.36e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 45.20 E-value: 7.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 226 LLIAFGVKLPIVPLHTWLPdahgEATAPVHMLLAGILL---KMGGYALLRFNAQLLPAahaqfaPLLIVLGVVNIIYAAL 302
Cdd:MTH00112 98 LTLALAMKLGLAPFHFWLP----EVLQGSTTTTALILStwqKLAPLTLLLMTSNSLNP------TLLLTLAILSTLIGGW 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 303 TSFAQRNLkRKI-AYSSISHMGFVLIGIgsfsSLGTSGAMLQMVSHGLIGASLFFLVgatyDRTKTLKLDEMSGVGQKMR 381
Cdd:MTH00112 168 GGLNQTQL-RKImAFSSIAHLGWMIAII----TYSPKLTLLTFYIYILMTTPMFLTL----NTTSTKTLKDMMTSWTKSP 238
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 123554765 382 IMFALwTACSLASLA-LPGMSGFVSELMVFTGFVTDEVYTLPFRVIMASL 430
Cdd:MTH00112 239 TLNTT-LMLTLLSLAgLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSL 287
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
216-484 |
8.15e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 45.38 E-value: 8.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 216 QKFQILCYVGLLIAFGvKLPIVPLHTWLPDAHgEATAPVHMLLAGILLKMGGYALLRFNAQLLpaAHAQFAPLLI-VLGV 294
Cdd:MTH00210 208 ESLTIICLLLFIGAVG-KSAQLGLHTWLPDAM-EGPTPVSALIHAATMVTAGVFLIIRSGPLF--EGSPLALTIVtILGA 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 295 VNIIYAALTSFAQRNLKRKIAYSSISHMGF-VLI-GIGSFSSlgtsgAMLQMVSHGLIGASLFFLVG----ATYDRTKTL 368
Cdd:MTH00210 284 LTAFFAATVGVVQNDLKKVIAYSTCSQLGYmVMVcGISNYST-----SLFHLMNHAFFKALLFLSAGsvihAVSDEQDMR 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 369 KldeMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTgfVTDEVYTLPFRVIMASLAAigvILTPIYLLSMLRE 448
Cdd:MTH00210 359 K---MGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILE--LTYDKYYIAFAYWLGSFSA---LLTAFYSIRLIYL 430
|
250 260 270
....*....|....*....|....*....|....*.
gi 123554765 449 IFFGKENPKlteERKLIDAEPREVYIIACLLLPIIG 484
Cdd:MTH00210 431 TFITNTNSK---KEVFIGVHESSWNITFPLLLLAFG 463
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
117-430 |
1.03e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 44.39 E-value: 1.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 117 KFKPKLFFFLILVMdgGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNRQYAATKFIIYTAGSSIFILLAALAMGF 196
Cdd:MTH00011 4 TFPTMFLFSSTMTL--GTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 197 YGTEIPNFEFSHLaaqdftqkfqilcyvglLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGiLLKMGGYALLRFNAQ 276
Cdd:MTH00011 82 FPSLLKNITALML-----------------LVSLMLKLGMAPCHFWFPSVMSSISWTLCLILST-WQKIAPLSILFFFTS 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 277 LLPAahaqfaPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSSLgtsgAMLQMVSHGLIGASLFF 356
Cdd:MTH00011 144 HNIL------PMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSM----AILYFMTYIIITTPLML 213
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 123554765 357 LVG--ATYDRTKTLKLDEMSGVGQKMRIMFALwtacSLAslALPGMSGFVSELMVFTGFVTDEVYTLPFRVIMASL 430
Cdd:MTH00011 214 LFAylNAFSTKFNSKISSMSQTTSMSLFIMLL----SLG--GLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSL 283
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
226-409 |
2.51e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 43.37 E-value: 2.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 226 LLIAFGVKLPIVPLHTWLPDAHGEATapvhmLLAGILL----KMGGYALLRFNAQLLPaahaqfAPLLIVLGVVNIIYAA 301
Cdd:MTH00070 98 LTIALMMKLGIAPFHFWLPEVLQGLD-----LTTGLILstwqKLAPMALLIQISHLLN------SNLLIIMGLLSTLIGG 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 302 LTSFAQRNLKRKIAYSSISHMGFVLIgIGSFSSLGTsgaMLQMVSHGLIGASLFFLVGAtydrTKTLKLDEMSGVGQKMR 381
Cdd:MTH00070 167 WGGLNQTQLRKIMAYSSIAHLGWMII-ILTFSPHLT---LLNLLIYLIMTSSMFLMLMN----LNSTNINKLSSSWSKNP 238
|
170 180
....*....|....*....|....*....
gi 123554765 382 IMFALwTACSLASLA-LPGMSGFVSELMV 409
Cdd:MTH00070 239 TLTSM-MMLTLLSLGgLPPTTGFIPKWLI 266
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
238-405 |
2.78e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 43.86 E-value: 2.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 238 PLHTWLPDAHGEAT---APVH---MLLAGILLKmggyallrfnAQLLPaAHAQFAPLLIVLGVVNIIYA---ALTSFAQR 308
Cdd:PRK07376 245 PLHVWLPDAMEGPTpisALIHaatMVAAGVFLV----------ARMYP-VFEQFPAVMTVIAWTGAITAflgASIALTQN 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 309 NLKRKIAYSSISHMGFVLI--GIGSFSSlgtsgAMLQMVSHGLIGASLFF-----------LVGATYDRTKTLKLdeMSG 375
Cdd:PRK07376 314 DIKKGLAYSTISQLGYMVMamGCGAYSA-----GLFHLMTHAYFKAMLFLgsgsvihgmeeVVGHDPVLAQDMRL--MGG 386
|
170 180 190
....*....|....*....|....*....|
gi 123554765 376 VGQKMRIMFALWTACSLASLALPGMSGFVS 405
Cdd:PRK07376 387 LRKYMPITAITFLIGCLAISGIPPFAGFWS 416
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
224-355 |
3.75e-04 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 43.10 E-value: 3.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 224 VGLLIAFGVKLPIV--PLHTWLPDAhGEATAPVHMLLAGILLKMGGYALLRFNaqllPAAHAQFA-PLLIVLGVVNIIYA 300
Cdd:PRK08601 206 INLLLILAVMIPAAqwPFQRWLIES-AVAPTPVSAIMHAGLVNAGGIMLTRFS----PLFHDDIAqILLLIFASISVLIG 280
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 123554765 301 ALTSFAQRNLKRKIAYSSISHMGFVLIGigsfSSLGT-SGAMLQMVSHGLIGASLF 355
Cdd:PRK08601 281 TGISLVQVDYKRQLVGSTMAQMGFMLVQ----CALGAySAAIIHLILHGLFKATLF 332
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
122-327 |
7.40e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 42.08 E-value: 7.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 122 LFFFLILVMDGGQIAVFAVQDMLLFFLTWELELIPVYLLLAIWGGKNRQYAATKFIIYTAGSSIFILLAalaMGFYGTEI 201
Cdd:PRK06591 116 LFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIA---IGFLLSIT 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 202 PNFEFSHLAA--QDFTQKFQILCYVGLLIAFGV-KLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQL- 277
Cdd:PRK06591 193 GSLNMTDIAAylQEHTNSRIITIAIGFFLIGAIlKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIi 272
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 123554765 278 ----LPAAHAQFaplLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLI 327
Cdd:PRK06591 273 gyetIKTAITNF---IRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFL 323
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
228-403 |
2.07e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 40.56 E-value: 2.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 228 IAFGVKLPIVPLHTWLP------DahgeatapvhmLLAGILL----KMGGYALLrfnAQLLPAAHaqfaPLLIVLGVVNI 297
Cdd:MTH00135 100 LALALKIGLAPLHFWLPevlqglD-----------LTTGLILstwqKLAPFALI---LQIAPTNP----TLLITLGLTST 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 298 IYAALTSFAQRNLkRKI-AYSSISHMGFVLIgIGSFSslgTSGAMLQMVSHGLIGASLFFlvgaTYDRTKTLKLDEMSGV 376
Cdd:MTH00135 162 LVGGWGGLNQTQL-RKIlAYSSIAHLGWMIL-VLQFS---PSLTLLALLTYIIMTSSAFL----TFKLNSSTKINTLATS 232
|
170 180
....*....|....*....|....*...
gi 123554765 377 GQKMRIMFALwTACSLASLA-LPGMSGF 403
Cdd:MTH00135 233 WTKAPALTAL-TPLILLSLGgLPPLTGF 259
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
218-430 |
5.04e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 39.14 E-value: 5.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 218 FQILCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAgILLKMGGYALLRFNAQLLpaahaqFAPLLIVLGVVNI 297
Cdd:MTH00041 90 LNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIA-TWQKIAPLILLISISNLL------NSNILILCGILSV 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123554765 298 IYAALTSFAQRNLKRKIAYSSISHMGFVLigIGSFSSLGTSGAMLqmVSHGLIGASLfFLVGATYDRTKTLKLDEMSGVG 377
Cdd:MTH00041 163 LVGGWGGLNQTQTRKILAFSSIAHLGWII--ITSAYSPNASIIMF--LIYIIINTSI-FLIGNNFSLSTLSHLNKLSQLN 237
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 123554765 378 QKMRIMFALwtacSLASLA-LPGMSGFVSELMVFTGFVTDEVYTLPFRVIMASL 430
Cdd:MTH00041 238 PISAFLFIL----SILSLGgLPPLTGFLNKFISLYCLIQNNSILISIILIIGSL 287
|
|
| |
