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Conserved domains on  [gi|25090288|sp|Q61521|]
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RecName: Full=Proepiregulin; Contains: RecName: Full=Epiregulin; Short=EPR; Flags: Precursor

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA03099 super family cl31525
epidermal growth factor-like protein (EGF-like protein); Provisional
 58-141 1.04e-11

epidermal growth factor-like protein (EGF-like protein); Provisional


The actual alignment was detected with superfamily member PHA03099:

Pssm-ID: 165381  Cd Length: 139  Bit Score: 58.88  E-value: 1.04e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25090288   58 ITKCSSDMDGYCLHGQCIYLVDMREKFCRCEVGYTGLRCEHFFLTVHQPLSK-----EYVALTVILIFLFLIITAGCIYY 132
Cdd:PHA03099  42 IRLCGPEGDGYCLHGDCIHARDIDGMYCRCSHGYTGIRCQHVVLVDYQRSEKpntttSYIPSPGIVLVLVGIIITCCLLS 121


                 ....*....
gi 25090288  133 FCRWYKNRK 141
Cdd:PHA03099 122 VYRFTRRTK 130
 
Name Accession Description Interval E-value
PHA03099 PHA03099
epidermal growth factor-like protein (EGF-like protein); Provisional
 58-141 1.04e-11

epidermal growth factor-like protein (EGF-like protein); Provisional


Pssm-ID: 165381  Cd Length: 139  Bit Score: 58.88  E-value: 1.04e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25090288   58 ITKCSSDMDGYCLHGQCIYLVDMREKFCRCEVGYTGLRCEHFFLTVHQPLSK-----EYVALTVILIFLFLIITAGCIYY 132
Cdd:PHA03099  42 IRLCGPEGDGYCLHGDCIHARDIDGMYCRCSHGYTGIRCQHVVLVDYQRSEKpntttSYIPSPGIVLVLVGIIITCCLLS 121


                 ....*....
gi 25090288  133 FCRWYKNRK 141
Cdd:PHA03099 122 VYRFTRRTK 130
 
Name Accession Description Interval E-value
PHA03099 PHA03099
epidermal growth factor-like protein (EGF-like protein); Provisional
 58-141 1.04e-11

epidermal growth factor-like protein (EGF-like protein); Provisional


Pssm-ID: 165381  Cd Length: 139  Bit Score: 58.88  E-value: 1.04e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25090288   58 ITKCSSDMDGYCLHGQCIYLVDMREKFCRCEVGYTGLRCEHFFLTVHQPLSK-----EYVALTVILIFLFLIITAGCIYY 132
Cdd:PHA03099  42 IRLCGPEGDGYCLHGDCIHARDIDGMYCRCSHGYTGIRCQHVVLVDYQRSEKpntttSYIPSPGIVLVLVGIIITCCLLS 121


                 ....*....
gi 25090288  133 FCRWYKNRK 141
Cdd:PHA03099 122 VYRFTRRTK 130
PHA02887 PHA02887
EGF-like protein; Provisional
 60-97 1.99e-10

EGF-like protein; Provisional


Pssm-ID: 165214  Cd Length: 126  Bit Score: 55.32  E-value: 1.99e-10
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 25090288   60 KCSSDMDGYCLHGQCIYLVDMREKFCRCEVGYTGLRCE 97
Cdd:PHA02887  85 KCKNDFNDFCINGECMNIIDLDEKFCICNKGYTGIRCD 122
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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