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Conserved domains on  [gi|81835624|sp|Q7V3C1|]
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RecName: Full=NAD(P)H-quinone oxidoreductase subunit 1; AltName: Full=NAD(P)H dehydrogenase I subunit 1; AltName: Full=NDH-1 subunit 1; AltName: Full=NDH-A

Protein Classification

complex I subunit 1 family protein( domain architecture ID 103)

complex I subunit 1 family protein similar to NADH dehydrogenase subunit 1, which is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

EC:  7.1.1.-
Gene Ontology:  GO:0016655|GO:0016020
PubMed:  23417064|24059520
SCOP:  4005664

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK06076 super family cl00469
NADH-quinone oxidoreductase subunit NuoH;
18-366 0e+00

NADH-quinone oxidoreductase subunit NuoH;


The actual alignment was detected with superfamily member CHL00032:

Pssm-ID: 469782  Cd Length: 363  Bit Score: 518.74  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   18 FGLSSELAHIIWLPLPMLLVLVSAVVGVLVTVWLERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSI 97
Cdd:CHL00032  17 LESLKEVYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIR 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   98 LFTAGPILVLVPVILSWLIVPFGQNLLISNVGIGIFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLA 177
Cdd:CHL00032  97 LFSIGPSIAVISILLSYLVIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLT 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  178 LSVLAIVLMTNSLSTIDIVNQQSGAGILSWNIWRQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALF 257
Cdd:CHL00032 177 LCVLSISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLF 256
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  258 YLGSYINLILSALLVSILYLGGWGFPIPVEIIakaLNLPIDAPVIQVFTASIGIIMTVLKAYLLVFVAILLRWTTPRVRI 337
Cdd:CHL00032 257 YVASYLNLLVSSLFVTVLYLGGWNLSIPYIFI---PELFEINKTGGVFGTTIGIFITLAKTYLFLFISITTRWTLPRLRM 333
                        330       340
                 ....*....|....*....|....*....
gi 81835624  338 DQLLDLGWKFLLPISLANLLVTAGLKLAF 366
Cdd:CHL00032 334 DQLLNLGWKFLLPISLGNLLLTTSFQLLS 362
 
Name Accession Description Interval E-value
ndhA CHL00032
NADH dehydrogenase subunit 1
18-366 0e+00

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 518.74  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   18 FGLSSELAHIIWLPLPMLLVLVSAVVGVLVTVWLERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSI 97
Cdd:CHL00032  17 LESLKEVYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIR 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   98 LFTAGPILVLVPVILSWLIVPFGQNLLISNVGIGIFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLA 177
Cdd:CHL00032  97 LFSIGPSIAVISILLSYLVIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLT 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  178 LSVLAIVLMTNSLSTIDIVNQQSGAGILSWNIWRQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALF 257
Cdd:CHL00032 177 LCVLSISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLF 256
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  258 YLGSYINLILSALLVSILYLGGWGFPIPVEIIakaLNLPIDAPVIQVFTASIGIIMTVLKAYLLVFVAILLRWTTPRVRI 337
Cdd:CHL00032 257 YVASYLNLLVSSLFVTVLYLGGWNLSIPYIFI---PELFEINKTGGVFGTTIGIFITLAKTYLFLFISITTRWTLPRLRM 333
                        330       340
                 ....*....|....*....|....*....
gi 81835624  338 DQLLDLGWKFLLPISLANLLVTAGLKLAF 366
Cdd:CHL00032 334 DQLLNLGWKFLLPISLGNLLLTTSFQLLS 362
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
24-367 1.19e-141

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 405.28  E-value: 1.19e-141
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  24 LAHIIWLPLPMLLVLVSAVVGVLVTVWLERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGP 103
Cdd:COG1005   5 LAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAP 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624 104 ILVLVPVILSWLIVPFGQNLLISNVGIGIFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAI 183
Cdd:COG1005  85 ILAFIPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGV 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624 184 VLMTNSLSTIDIVNQQSGagiLSWNIWRQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYI 263
Cdd:COG1005 165 VLLAGSLNLSEIVEAQAG---GLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYA 241
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624 264 NLILSALLVSILYLGGWGFPIPveiiakalnlpidapvIQVFTASIGIIMTVLKAYLLVFVAILLRWTTPRVRIDQLLDL 343
Cdd:COG1005 242 NMFLVSALATTLFLGGWLGPFP----------------ILPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRL 305
                       330       340
                ....*....|....*....|....
gi 81835624 344 GWKFLLPISLANLLVTAGLKLAFP 367
Cdd:COG1005 306 GWKVLLPLSLVNLVLTAAVVLLFG 329
NADHdh pfam00146
NADH dehydrogenase;
42-360 6.03e-129

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 371.81  E-value: 6.03e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624    42 VVGVLVTVWLERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIVPFGQ 121
Cdd:pfam00146  10 LLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGP 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   122 NLLISNVGIGIFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTNSLSTIDIVNQQSG 201
Cdd:pfam00146  90 GLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAG 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   202 agilSWNIWRQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYLGGWG 281
Cdd:pfam00146 170 ----GWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWL 245
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 81835624   282 FPIPveiiakalnlpidapviqvftaSIGIIMTVLKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISLANLLVTA 360
Cdd:pfam00146 246 GPFP----------------------LPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
 
Name Accession Description Interval E-value
ndhA CHL00032
NADH dehydrogenase subunit 1
18-366 0e+00

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 518.74  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   18 FGLSSELAHIIWLPLPMLLVLVSAVVGVLVTVWLERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSI 97
Cdd:CHL00032  17 LESLKEVYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIR 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   98 LFTAGPILVLVPVILSWLIVPFGQNLLISNVGIGIFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLA 177
Cdd:CHL00032  97 LFSIGPSIAVISILLSYLVIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLT 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  178 LSVLAIVLMTNSLSTIDIVNQQSGAGILSWNIWRQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALF 257
Cdd:CHL00032 177 LCVLSISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLF 256
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  258 YLGSYINLILSALLVSILYLGGWGFPIPVEIIakaLNLPIDAPVIQVFTASIGIIMTVLKAYLLVFVAILLRWTTPRVRI 337
Cdd:CHL00032 257 YVASYLNLLVSSLFVTVLYLGGWNLSIPYIFI---PELFEINKTGGVFGTTIGIFITLAKTYLFLFISITTRWTLPRLRM 333
                        330       340
                 ....*....|....*....|....*....
gi 81835624  338 DQLLDLGWKFLLPISLANLLVTAGLKLAF 366
Cdd:CHL00032 334 DQLLNLGWKFLLPISLGNLLLTTSFQLLS 362
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
27-362 2.95e-144

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 411.51  E-value: 2.95e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   27 IIWLPLPMLLVLVSAVVGVLVTVWLERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILV 106
Cdd:PRK06076   9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  107 LVPVILSWLIVPFGQNLLISNVGIGIFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLM 186
Cdd:PRK06076  89 FIPAFLAWAVIPFGPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  187 TNSLSTIDIVNQQSgagiLSWNIWRQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLI 266
Cdd:PRK06076 169 AGSLNLSDIVEAQF----LSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMI 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  267 LSALLVSILYLGGWGFPIPVEiiakalnlpidapviqvfTASIGIIMTVLKAYLLVFVAILLRWTTPRVRIDQLLDLGWK 346
Cdd:PRK06076 245 LVSALITTLFLGGWLPPFPLG------------------GGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWK 306
                        330
                 ....*....|....*.
gi 81835624  347 FLLPISLANLLVTAGL 362
Cdd:PRK06076 307 VLLPLSLVNLLLTAAV 322
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
24-367 1.19e-141

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 405.28  E-value: 1.19e-141
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  24 LAHIIWLPLPMLLVLVSAVVGVLVTVWLERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGP 103
Cdd:COG1005   5 LAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAP 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624 104 ILVLVPVILSWLIVPFGQNLLISNVGIGIFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAI 183
Cdd:COG1005  85 ILAFIPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGV 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624 184 VLMTNSLSTIDIVNQQSGagiLSWNIWRQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYI 263
Cdd:COG1005 165 VLLAGSLNLSEIVEAQAG---GLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYA 241
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624 264 NLILSALLVSILYLGGWGFPIPveiiakalnlpidapvIQVFTASIGIIMTVLKAYLLVFVAILLRWTTPRVRIDQLLDL 343
Cdd:COG1005 242 NMFLVSALATTLFLGGWLGPFP----------------ILPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRL 305
                       330       340
                ....*....|....*....|....
gi 81835624 344 GWKFLLPISLANLLVTAGLKLAFP 367
Cdd:COG1005 306 GWKVLLPLSLVNLVLTAAVVLLFG 329
NADHdh pfam00146
NADH dehydrogenase;
42-360 6.03e-129

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 371.81  E-value: 6.03e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624    42 VVGVLVTVWLERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIVPFGQ 121
Cdd:pfam00146  10 LLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGP 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   122 NLLISNVGIGIFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTNSLSTIDIVNQQSG 201
Cdd:pfam00146  90 GLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAG 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   202 agilSWNIWRQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYLGGWG 281
Cdd:pfam00146 170 ----GWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWL 245
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 81835624   282 FPIPveiiakalnlpidapviqvftaSIGIIMTVLKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISLANLLVTA 360
Cdd:pfam00146 246 GPFP----------------------LPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
52-366 1.01e-66

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 213.82  E-value: 1.01e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   52 ERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIVPFGQNLLISNVGIG 131
Cdd:MTH00054  26 ERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYGEGVVLSDLGIG 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  132 IFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTNSLSTIDIVNQQSGAgilsWNIWR 211
Cdd:MTH00054 106 ILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNI----WFIFP 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  212 QPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYLGGWGFPIPVEIIAk 291
Cdd:MTH00054 182 LFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLVISGPTSYF- 260
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 81835624  292 alnlpidapviqvftasIGIIMTVLKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISLANLLVTAGLKLAF 366
Cdd:MTH00054 261 -----------------SNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGF 318
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
44-359 1.29e-66

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 213.68  E-value: 1.29e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   44 GVLVTVWLERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIVPFGQNL 123
Cdd:MTH00040  20 AVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVPTPT 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  124 LisNVGIGIFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTNSLSTIDIVNQQSGag 203
Cdd:MTH00040 100 L--NVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNG-- 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  204 ilSWNIWRQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYLGGwgfp 283
Cdd:MTH00040 176 --SWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGG---- 249
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 81835624  284 ipveiiakalNLPIDApviqvfTASIGIIMTVLKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISLANLLVT 359
Cdd:MTH00040 250 ----------GSPFNE------IFPINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFY 309
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
42-366 1.91e-66

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 213.06  E-value: 1.91e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   42 VVGVLVTV----WLERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIV 117
Cdd:MTH00216  16 IVPLLIAVayltLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVI 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  118 PFGQNLLISNVGIGIFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTNSLSTIDIVN 197
Cdd:MTH00216  96 PYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVL 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  198 QQSGAGILSWNIWrqPVGfIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYL 277
Cdd:MTH00216 176 AQNNGIWFFFPLF--PVA-IMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFL 252
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  278 GGWGFPIPVeiiakalnlpidapviqvftASIGIIMTVLKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISLANLL 357
Cdd:MTH00216 253 GGWLSPIKY--------------------FKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVI 312

                 ....*....
gi 81835624  358 VTAGLKLAF 366
Cdd:MTH00216 313 FVASVLFGF 321
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
43-358 7.11e-62

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 200.87  E-value: 7.11e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   43 VGVLVTV----WLERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIVP 118
Cdd:MTH00143  12 LCVLLAVafftLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYP 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  119 fgQNLLISNVGIGIFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTNSLSTIDIVNQ 198
Cdd:MTH00143  92 --SYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISES 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  199 QSgagiLSWNIWRQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYLG 278
Cdd:MTH00143 170 QF----SVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFG 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  279 GWGfpipveiiakalnlpidapviqVFTASIGIIMTvLKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISLANLLV 358
Cdd:MTH00143 246 GSS----------------------VLFLLGGVVFM-FKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVL 302
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
51-372 5.28e-61

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 199.08  E-value: 5.28e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   51 LERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIVPFGQNLliSNVGI 130
Cdd:MTH00071  28 VERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMPNNL--SNLNL 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  131 GIFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTNSLStidivnqqsgagILSWNIW 210
Cdd:MTH00071 106 GILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFS------------LMNFNTT 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  211 RQPVGFII--------FWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYLGGWGF 282
Cdd:MTH00071 174 QEFMWLIIpawpmaamWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYN 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  283 PIPVEIiakalnlpidapviqvFTASIgiimtVLKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISLANLLvtagL 362
Cdd:MTH00071 254 HLQPEL----------------STMNL-----MIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTI----F 308
                        330
                 ....*....|
gi 81835624  363 KLAFPQFFGG 372
Cdd:MTH00071 309 HISLPISTLG 318
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
52-366 1.03e-60

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 199.09  E-value: 1.03e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   52 ERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIVPFGQNLLISNVGIG 131
Cdd:MTH00029  31 ERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMDQGVFLSDLDVG 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  132 IFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTNSLSTIDIVNQQSGAgilsWNIWR 211
Cdd:MTH00029 111 VLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSV----WLIIP 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  212 QPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYLGGW-----GFPIPV 286
Cdd:MTH00029 187 LFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGWlspldGIPTPP 266
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  287 EIIAKALNLPIDAPVIQVFTasigiimtvlKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISLANLLVTAGLKLAF 366
Cdd:MTH00029 267 EAFSIFEQIASSKSSFWFFT----------KSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILIGF 336
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
51-354 1.52e-59

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 195.11  E-value: 1.52e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   51 LERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIVPFGQNLLISNVGI 130
Cdd:MTH00111  28 LERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPFPLADLNLGL 107
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  131 gIFLwIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTN--SLSTIDIVNQQSGAGILSWN 208
Cdd:MTH00111 108 -LFL-LAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGgyTLQTLATTQEPLWLIFSSWP 185
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  209 IwrqpvgFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYlggwgfpipvei 288
Cdd:MTH00111 186 L------AMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILF------------ 247
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 81835624  289 iakaLNLPIDAPVIQVFTAsigIIMTvlKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISLA 354
Cdd:MTH00111 248 ----LNPSTLNLPPELFTI---NLMT--KTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLA 304
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
51-364 2.70e-59

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 194.10  E-value: 2.70e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   51 LERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIVPFGQNllISNVGI 130
Cdd:MTH00225  24 LERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPSMFS--IYSFKF 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  131 GIFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTNSLSTIDIVNQQSgagiLSWNIW 210
Cdd:MTH00225 102 GILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQK----YFWFMF 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  211 RQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYLGGWGFPIPveiia 290
Cdd:MTH00225 178 VLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGFFVTID----- 252
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 81835624  291 kalnlpidapviqvftasigiIMTVLKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISLANLLVTAGLKL 364
Cdd:MTH00225 253 ---------------------LFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
42-366 3.67e-59

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 193.83  E-value: 3.67e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   42 VVGVLVTV----WLERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIV 117
Cdd:MTH00193  12 IICVLVSVafltLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIY 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  118 PFGQNLLISNVGIGIFLwiALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTNSLSTIDIVN 197
Cdd:MTH00193  92 PYLFNLISFNLGILFFL--CCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMN 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  198 QQSgagiLSWNIWRQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYL 277
Cdd:MTH00193 170 YQK----YIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFL 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  278 GGwgfpipveiiakalnlpidapviqvftaSIGIIMTVLKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISLANLL 357
Cdd:MTH00193 246 GG----------------------------DLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLL 297

                 ....*....
gi 81835624  358 VTAGLKLAF 366
Cdd:MTH00193 298 FFFGLKIFL 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
49-366 8.38e-59

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 192.82  E-value: 8.38e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   49 VWLERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIVPFGQNLLISNV 128
Cdd:MTH00218  23 TLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPFSLINLNL 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  129 GIGIFLwiALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTNSLSTIDIVNQQSGagilSWN 208
Cdd:MTH00218 103 GVLFIL--AISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQET----IWL 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  209 IWRQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYLGGWGFPIPVei 288
Cdd:MTH00218 177 LIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLTTINL-- 254
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 81835624  289 iakalnlpidapviqvftasigiimtVLKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISLANLLVTAGLKLAF 366
Cdd:MTH00218 255 --------------------------MLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
51-366 1.82e-55

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 184.81  E-value: 1.82e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   51 LERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIVPFGQNLLISNVGI 130
Cdd:MTH00134  29 LERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMPYPVTDLNLGI 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  131 GIFLwiALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTN--SLSTIDIVNQQSGAGILSWn 208
Cdd:MTH00134 109 LFIL--ALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGgfTLQTFNTAQESIWLLLPAW- 185
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  209 iwrqPVGfIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYLGGWGFPIPVEI 288
Cdd:MTH00134 186 ----PLA-AMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPTLPEL 260
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 81835624  289 IakALNLpidapviqvftasigiiMTvlKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISLANLLVTAGLKLAF 366
Cdd:MTH00134 261 T--TINL-----------------MT--KAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
51-354 2.20e-55

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 184.44  E-value: 2.20e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   51 LERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIVPFGQNLLisNVGI 130
Cdd:MTH00104  23 VERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPLPMPYPLI--NMNL 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  131 GIFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTNS--LSTIDIVNQQSGAGILSWn 208
Cdd:MTH00104 101 GVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSftLSTLITTQEHLWLIFPSW- 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  209 iwrqPVGFIIFwICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYLGGWGFPipvei 288
Cdd:MTH00104 180 ----PLAMMWF-ISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAFHNP----- 249
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 81835624  289 iakalNLPidapviQVFTASIgiimtVLKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISLA 354
Cdd:MTH00104 250 -----YMP------ELYTTNF-----TIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 299
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
51-366 3.19e-55

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 183.40  E-value: 3.19e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   51 LERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIVPFGQNllISNVGI 130
Cdd:MTH00195  25 LERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSPFG--FSSINL 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  131 GIFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTNSLSTIDIVNQQSgagiLSWNIW 210
Cdd:MTH00195 103 SVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQG----FSWVIL 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  211 RQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYLGGWgfpipveiia 290
Cdd:MTH00195 179 LCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGG---------- 248
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 81835624  291 kalnlpidapviqvftasiGIIMTVLKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISLANLLVTAGLKLAF 366
Cdd:MTH00195 249 -------------------GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
51-358 1.41e-47

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 163.80  E-value: 1.41e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   51 LERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIVPFGQNLLISNVGI 130
Cdd:MTH00010  26 LERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHPSFFLKFSI 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  131 GIFLwiALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTNSLSTIDIVNQQSgagilSWNIW 210
Cdd:MTH00010 106 LLFL--CVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQY-----SWILL 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  211 RQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYLGgwgfpipveiia 290
Cdd:MTH00010 179 MIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTS------------ 246
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 81835624  291 kalnlpidapviQVFTASIGIIMTVLKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISLANLLV 358
Cdd:MTH00010 247 ------------FIPSIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMI 302
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
50-353 1.30e-43

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 152.36  E-value: 1.30e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   50 WLERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIVPFGQNLL-ISNV 128
Cdd:MTH00090  18 LYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDFLsFEYS 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  129 GIGIFLWIALSSIQpigLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTNSLSTIDivnqqsgagilSWN 208
Cdd:MTH00090  98 LLFFLCLIGFSVYT---TLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS-----------SFS 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  209 IWrQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYLGgwgfpipvei 288
Cdd:MTH00090 164 LS-LFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK---------- 232
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 81835624  289 iakalnlpidapviqvftasigiiMTVLKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISL 353
Cdd:MTH00090 233 ------------------------FSFLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSL 273
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
51-358 1.29e-36

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 134.54  E-value: 1.29e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  51 LERKISAAAQQRIGPeyagalGVLQPIADGLKLLVKEDIIPAKAdSILFTAGPILVLVPVILSWLIVPFGQNLLISNVGI 130
Cdd:COG0650  24 IIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETA-SWLFRAAPYVALAAMLLAALLVPVLTTGPPLSFSG 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624 131 GIFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTNSLSTIDIVNQQSGAGILSWNIW 210
Cdd:COG0650  97 DLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAAHGPLLLSPS 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624 211 RqPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYLgGWGFPIPVeiia 290
Cdd:COG0650 177 L-LLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFL-PWGIALTL---- 250
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 81835624 291 kalnlpidapviqvftaSIGIIMTVLKAYLLVFVAILLRWTTPRVRIDQLLDLGWKFLLPISLANLLV 358
Cdd:COG0650 251 -----------------LLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLA 301
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
52-358 4.79e-31

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 119.26  E-value: 4.79e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624   52 ERKISAAAQQRIGPEYAGALGVLQPIADGLKLLVKEDIIPAKADSILFTAGPILVLVPVILSWLIvpFGQNLLISNVGIG 131
Cdd:MTH00058  25 ERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFI--YGSYYSGSYSSLS 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  132 IFLWIALSSIQPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLALSVLAIVLMTNSLSTIDIvnqqSGAGILSWNIWr 211
Cdd:MTH00058 103 LLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDF----YYSGWLSVLLF- 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81835624  212 qPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYINLILSALLVSILYLGGwgfpipveiiak 291
Cdd:MTH00058 178 -PLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGG------------ 244
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 81835624  292 alnlpidapviqvftasiGIIMTVLKAYLLVFvaILLRWTTPRVRIDQLLDLGWKFLLPISLANLLV 358
Cdd:MTH00058 245 ------------------GFVSIMLLFHLLFF--MWARATLPRVRYDYFVNFFWEYCLVLLILSLFV 291
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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