NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|71152015|sp|Q9D7Z3|]
View 

RecName: Full=U3 small nucleolar RNA-associated protein NOL7; Short=U3 snoRNA-associated protein NOL7; AltName: Full=Nucleolar protein 7

Protein Classification

NUC129 domain-containing protein( domain architecture ID 10548220)

NUC129 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
NUC129 pfam08157
NUC129 domain; This C terminal domain is found in a novel family of hypothetical nucleolar ...
 167-228 7.66e-31

NUC129 domain; This C terminal domain is found in a novel family of hypothetical nucleolar proteins.


:

Pssm-ID: 462383  Cd Length: 62  Bit Score: 109.02  E-value: 7.66e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 71152015   167 YMAVRLKDEDLRDSRQEAAKHFIHSCLYGSDSKRTTVNKFLSLNNKRSPVKKAAAQFLTSTW 228
Cdd:pfam08157   1 YTAVRLKDQSLANSQQQAAKDFIQSRLYGPGSNRTTANEFLSLNNKRGPVKKAAVQFVNKSW 62
 
Name Accession Description Interval E-value
NUC129 pfam08157
NUC129 domain; This C terminal domain is found in a novel family of hypothetical nucleolar ...
 167-228 7.66e-31

NUC129 domain; This C terminal domain is found in a novel family of hypothetical nucleolar proteins.


Pssm-ID: 462383  Cd Length: 62  Bit Score: 109.02  E-value: 7.66e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 71152015   167 YMAVRLKDEDLRDSRQEAAKHFIHSCLYGSDSKRTTVNKFLSLNNKRSPVKKAAAQFLTSTW 228
Cdd:pfam08157   1 YTAVRLKDQSLANSQQQAAKDFIQSRLYGPGSNRTTANEFLSLNNKRGPVKKAAVQFVNKSW 62
 
Name Accession Description Interval E-value
NUC129 pfam08157
NUC129 domain; This C terminal domain is found in a novel family of hypothetical nucleolar ...
 167-228 7.66e-31

NUC129 domain; This C terminal domain is found in a novel family of hypothetical nucleolar proteins.


Pssm-ID: 462383  Cd Length: 62  Bit Score: 109.02  E-value: 7.66e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 71152015   167 YMAVRLKDEDLRDSRQEAAKHFIHSCLYGSDSKRTTVNKFLSLNNKRSPVKKAAAQFLTSTW 228
Cdd:pfam08157   1 YTAVRLKDQSLANSQQQAAKDFIQSRLYGPGSNRTTANEFLSLNNKRGPVKKAAVQFVNKSW 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH