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Conserved domains on  [gi|81789325|sp|Q9RU94|]
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RecName: Full=NADH-quinone oxidoreductase subunit H; AltName: Full=NADH dehydrogenase I subunit H; AltName: Full=NDH-1 subunit H

Protein Classification

complex I subunit 1/NuoH family protein( domain architecture ID 10002943)

complex I subunit 1/NuoH family protein such as bacterial NADH-quinone oxidoreductase subunit H (NuoH) that is part of the connecting domain of complex I of the respiratory chain that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

EC:  7.1.1.-
Gene Ontology:  GO:0048038|GO:0016655|GO:0016020
PubMed:  23417064|24059520|10940377
SCOP:  4005664

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-342 6.01e-151

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


:

Pssm-ID: 440629  Cd Length: 329  Bit Score: 429.55  E-value: 6.01e-151
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   1 MPDWLSALLITLLKAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVY 80
Cdd:COG1005   1 MSLLLAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLF 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  81 TLAPILAIGMALTAFGGIPAGPPGslfgtdpWVYNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISY 160
Cdd:COG1005  81 LLAPILAFIPALLAFAVIPFGPGL-------VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISY 153

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325 161 ELGMGLSVLGLLMLVGSTNFLDIVEWQAGprgHGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSI 240
Cdd:COG1005 154 EIPLGLSLLGVVLLAGSLNLSEIVEAQAG---GLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGM 230

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325 241 KWALFQMAEYVNIMTASALMSTLFFGGYRGPtFLEPLIPGIssWPLVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGW 320
Cdd:COG1005 231 KFALFFLAEYANMFLVSALATTLFLGGWLGP-FPILPLGGL--PGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGW 307

                       330       340
                ....*....|....*....|..
gi 81789325 321 KLTLPLALVNTLVVAAVLAFVP 342
Cdd:COG1005 308 KVLLPLSLVNLVLTAAVVLLFG 329
 
Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-342 6.01e-151

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 429.55  E-value: 6.01e-151
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   1 MPDWLSALLITLLKAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVY 80
Cdd:COG1005   1 MSLLLAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLF 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  81 TLAPILAIGMALTAFGGIPAGPPGslfgtdpWVYNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISY 160
Cdd:COG1005  81 LLAPILAFIPALLAFAVIPFGPGL-------VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISY 153

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325 161 ELGMGLSVLGLLMLVGSTNFLDIVEWQAGprgHGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSI 240
Cdd:COG1005 154 EIPLGLSLLGVVLLAGSLNLSEIVEAQAG---GLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGM 230

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325 241 KWALFQMAEYVNIMTASALMSTLFFGGYRGPtFLEPLIPGIssWPLVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGW 320
Cdd:COG1005 231 KFALFFLAEYANMFLVSALATTLFLGGWLGP-FPILPLGGL--PGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGW 307

                       330       340
                ....*....|....*....|..
gi 81789325 321 KLTLPLALVNTLVVAAVLAFVP 342
Cdd:COG1005 308 KVLLPLSLVNLVLTAAVVLLFG 329
NADHdh pfam00146
NADH dehydrogenase;
14-335 2.53e-136

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 391.45  E-value: 2.53e-136
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    14 KAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPILAIGMALT 93
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    94 AFGGIPagppgslFGTDPWVYNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGMGLSVLGLLM 173
Cdd:pfam00146  81 AFAVIP-------FGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVL 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   174 LVGSTNFLDIVEWQAGprghGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWALFQMAEYVNI 253
Cdd:pfam00146 154 LAGSLSLSEIVEAQAG----GWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANM 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   254 MTASALMSTLFFGGYRGPtfleplipgISSWPLVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKLTLPLALVNTLV 333
Cdd:pfam00146 230 FLMSALAVTLFLGGWLGP---------FPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300


                  ..
gi 81789325   334 VA 335
Cdd:pfam00146 301 TA 302
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
6-337 4.23e-134

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 386.86  E-value: 4.23e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    6 SALLITLLKAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPI 85
Cdd:PRK06076   7 DLLLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPV 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   86 LAIGMALTAFGGIPAGPPgslfgtdpWVY-NLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGM 164
Cdd:PRK06076  87 IAFIPAFLAWAVIPFGPE--------LVIaDLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPL 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  165 GLSVLGLLMLVGSTNFLDIVEWQAgprgHGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWAL 244
Cdd:PRK06076 159 GLSLLAVVLLAGSLNLSDIVEAQF----LSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGL 234

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  245 FQMAEYVNIMTASALMSTLFFGGYRGPTFLEPLIPGIsswplVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKLTL 324
Cdd:PRK06076 235 FFLGEYINMILVSALITTLFLGGWLPPFPLGGGIPGA-----IWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLL 309

                        330
                 ....*....|...
gi 81789325  325 PLALVNTLVVAAV 337
Cdd:PRK06076 310 PLSLVNLLLTAAV 322
 
Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-342 6.01e-151

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 429.55  E-value: 6.01e-151
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   1 MPDWLSALLITLLKAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVY 80
Cdd:COG1005   1 MSLLLAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLF 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  81 TLAPILAIGMALTAFGGIPAGPPGslfgtdpWVYNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISY 160
Cdd:COG1005  81 LLAPILAFIPALLAFAVIPFGPGL-------VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISY 153

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325 161 ELGMGLSVLGLLMLVGSTNFLDIVEWQAGprgHGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSI 240
Cdd:COG1005 154 EIPLGLSLLGVVLLAGSLNLSEIVEAQAG---GLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGM 230

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325 241 KWALFQMAEYVNIMTASALMSTLFFGGYRGPtFLEPLIPGIssWPLVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGW 320
Cdd:COG1005 231 KFALFFLAEYANMFLVSALATTLFLGGWLGP-FPILPLGGL--PGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGW 307

                       330       340
                ....*....|....*....|..
gi 81789325 321 KLTLPLALVNTLVVAAVLAFVP 342
Cdd:COG1005 308 KVLLPLSLVNLVLTAAVVLLFG 329
NADHdh pfam00146
NADH dehydrogenase;
14-335 2.53e-136

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 391.45  E-value: 2.53e-136
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    14 KAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPILAIGMALT 93
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    94 AFGGIPagppgslFGTDPWVYNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGMGLSVLGLLM 173
Cdd:pfam00146  81 AFAVIP-------FGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVL 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   174 LVGSTNFLDIVEWQAGprghGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWALFQMAEYVNI 253
Cdd:pfam00146 154 LAGSLSLSEIVEAQAG----GWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANM 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   254 MTASALMSTLFFGGYRGPtfleplipgISSWPLVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKLTLPLALVNTLV 333
Cdd:pfam00146 230 FLMSALAVTLFLGGWLGP---------FPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300


                  ..
gi 81789325   334 VA 335
Cdd:pfam00146 301 TA 302
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
6-337 4.23e-134

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 386.86  E-value: 4.23e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    6 SALLITLLKAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPI 85
Cdd:PRK06076   7 DLLLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPV 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   86 LAIGMALTAFGGIPAGPPgslfgtdpWVY-NLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGM 164
Cdd:PRK06076  87 IAFIPAFLAWAVIPFGPE--------LVIaDLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPL 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  165 GLSVLGLLMLVGSTNFLDIVEWQAgprgHGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWAL 244
Cdd:PRK06076 159 GLSLLAVVLLAGSLNLSDIVEAQF----LSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGL 234

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  245 FQMAEYVNIMTASALMSTLFFGGYRGPTFLEPLIPGIsswplVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKLTL 324
Cdd:PRK06076 235 FFLGEYINMILVSALITTLFLGGWLPPFPLGGGIPGA-----IWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLL 309

                        330
                 ....*....|...
gi 81789325  325 PLALVNTLVVAAV 337
Cdd:PRK06076 310 PLSLVNLLLTAAV 322
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 8-338 2.26e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 260.04  E-value: 2.26e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    8 LLITLLKAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPILA 87
Cdd:MTH00054   1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   88 IGMALTAFGGIPAGpPGSLFGtdpwvyNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGMGLS 167
Cdd:MTH00054  81 LTLAFIAWGVIPYG-EGVVLS------DLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLI 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  168 VLGLLMLVGSTNFLDIVEWQAgprgHGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWALFQM 247
Cdd:MTH00054 154 IISVVLCVGSLNLTEIVLAQK----NIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFL 229

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  248 AEYVNIMTASALMSTLFFGGYrgptfLEPLIPGISSWPLVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKLTLPLA 327
Cdd:MTH00054 230 AEYCHIILMSTFGVILFLGGW-----LVISGPTSYFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLS 304

                        330
                 ....*....|.
gi 81789325  328 LVNTLVVAAVL 338
Cdd:MTH00054 305 LAFVVLVSGIL 315
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 8-328 2.98e-82

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 253.92  E-value: 2.98e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    8 LLITLLKAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPILA 87
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   88 IGMALTAFGGIPagppgSLFGtdpwVYNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGMGLS 167
Cdd:MTH00193  81 LFLSLLIWLIYP-----YLFN----LISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALI 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  168 VLGLLMLVGSTNFLDIVEWQAGPrghgWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWALFQM 247
Cdd:MTH00193 152 LLSFIFLIGSFNLLDFMNYQKYI----WFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFL 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  248 AEYVNIMTASALMSTLFFGGyrgptfleplipgisSWPLVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKLTLPLA 327
Cdd:MTH00193 228 AEYSSILFMSMLFVLMFLGG---------------DLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLS 292


                 .
gi 81789325  328 L 328
Cdd:MTH00193 293 L 293
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 11-328 1.36e-81

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 252.26  E-value: 1.36e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   11 TLLKAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPILAIGM 90
Cdd:MTH00225   3 FLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLIL 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   91 ALTAFGGIPAGPPgslfgtdpwVYNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGMGLSVLG 170
Cdd:MTH00225  83 SLILWSLYPSMFS---------IYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLS 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  171 LLMLVGSTNFLDIVEWQAGPrghgWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWALFQMAEY 250
Cdd:MTH00225 154 IVFLVLTYNLFDFSYNQKYF----WFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEY 229

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 81789325  251 VNIMTASALMSTLFFGGYRGPTFLeplipgisswplvWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKLTLPLAL 328
Cdd:MTH00225 230 GSILFMSMLTSILFFGGFFVTIDL-------------FLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSL 294
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 5-338 1.07e-80

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 250.81  E-value: 1.07e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    5 LSALLITLLKAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAP 84
Cdd:MTH00216   2 MVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAP 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   85 ILAIGMALTAFGGIPAGPPGSLFgtdpwvyNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGM 164
Cdd:MTH00216  82 VLSFTLALIVWGVIPYERGVLIS-------DFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSI 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  165 GLSVLGLLMLVGSTNFLDIVEWQagprGHGWLILFQVFAFAL-FMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWA 243
Cdd:MTH00216 155 GLIIISVLLCVGSLSITEIVLAQ----NNGIWFFFPLFPVAImFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFA 230

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  244 LFQMAEYVNIMTASALMSTLFFGGYRGPTFLEPLIPGisswplvWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKLT 323
Cdd:MTH00216 231 LFFLAEYAHIILMSCLTTILFLGGWLSPIKYFKGGAG-------WFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSY 303

                        330
                 ....*....|....*
gi 81789325  324 LPLALVNTLVVAAVL 338
Cdd:MTH00216 304 LPLSLGVVIFVASVL 318
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 9-328 3.02e-79

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 246.32  E-value: 3.02e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    9 LITLLKAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPILAI 88
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   89 GMALTAFGGIPAGPPGSLFGtdpWvynldaGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGMGLSV 168
Cdd:MTH00143  81 ILALLLWQLYPSYFSSSYFG---W------GLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLIL 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  169 LGLLMLVGSTNFLDIVEWQagprGHGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWALFQMA 248
Cdd:MTH00143 152 LFPLFLSGSFSFIEISESQ----FSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLA 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  249 EYVNIMTASALMSTLFFGGYRGPTFLEPlipgisswplVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKLTLPLAL 328
Cdd:MTH00143 228 EYANILFMSLLTVVLFFGGSSVLFLLGG----------VVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSL 297
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 8-328 2.06e-77

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 242.11  E-value: 2.06e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    8 LLITLLKAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPILA 87
Cdd:MTH00111   4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   88 IGMALTAFGGIPAgpPGSLFgtdpwvyNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGMGLS 167
Cdd:MTH00111  84 LLLALTIWTPLPM--PFPLA-------DLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGII 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  168 VLGLLMLVGSTNFLDIVEWQAgprgHGWLILfqvFAFALFM---VSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWAL 244
Cdd:MTH00111 155 LLSLILLSGGYTLQTLATTQE----PLWLIF---SSWPLAMmwyISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAL 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  245 FQMAEYVNIMTASALMSTLFF--GGYRGPTFLEPLIpgisswplvwLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKL 322
Cdd:MTH00111 228 FFLAEYANILLMNTLTTILFLnpSTLNLPPELFTIN----------LMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQ 297


                 ....*.
gi 81789325  323 TLPLAL 328
Cdd:MTH00111 298 FLPLTL 303
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 8-328 3.00e-77

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 241.35  E-value: 3.00e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    8 LLITLLKAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPILA 87
Cdd:MTH00218   1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   88 IGMALTAFGGIPAgpPGSLFgtdpwvyNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGMGLS 167
Cdd:MTH00218  81 LTLALLLWMPLPL--PFSLI-------NLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLI 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  168 VLGLLMLVGSTNFLDIVEWQagprGHGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWALFQM 247
Cdd:MTH00218 152 ILSLIILTGGFSLEGFNLTQ----ETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFL 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  248 AEYVNIMTASALMSTLFFGgyrgptfleplipgiSSWPLVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKLTLPLA 327
Cdd:MTH00218 228 AEYMNILFMNTLSVILFLG---------------TSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLS 292


                 .
gi 81789325  328 L 328
Cdd:MTH00218 293 L 293
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 8-337 1.16e-76

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 239.64  E-value: 1.16e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    8 LLITLLKAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPILA 87
Cdd:MTH00195   1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   88 IGMALTAFGGIPagppgSLFGtdpwVYNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGMGLS 167
Cdd:MTH00195  81 LALALILWVPIP-----SPFG----FSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLI 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  168 VLGLLMLVGSTNFLDIVEWQagprGHGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWALFQM 247
Cdd:MTH00195 152 ILCPICLAGSFDFTIMVISQ----GFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFM 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  248 AEYVNIMTASALMSTLFFGGyrgptfleplipgiSSWPLVWLiaKIAFFMFLFIWVRATLPRLRYDQLMRLGWKLTLPLA 327
Cdd:MTH00195 228 AEYSNIIFMSVLTTILFLGG--------------GGTIIVAL--KSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLI 291

                        330
                 ....*....|
gi 81789325  328 LVNTLVVAAV 337
Cdd:MTH00195 292 LSLLIPLAAI 301
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 13-350 4.05e-76

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 239.53  E-value: 4.05e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   13 LKAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPILAIGMAL 92
Cdd:MTH00029  11 IKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAI 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   93 TAFggipagppgSLFGTDPWVY--NLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGMGLSVLG 170
Cdd:MTH00029  91 LAW---------AIVTMDQGVFlsDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIIS 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  171 LLMLVGSTNFLDIVEWQAGPrghgWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWALFQMAEY 250
Cdd:MTH00029 162 VILCVGSLNISEIVISQRSV----WLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEY 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  251 VNIMTASALMSTLFFGGYRGPTFLEPLIPGI--------SSWPLVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKL 322
Cdd:MTH00029 238 SNIILMSCMMTIFFLGGWLSPLDGIPTPPEAfsifeqiaSSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKT 317

                        330       340
                 ....*....|....*....|....*...
gi 81789325  323 TLPLALVNTLVVAAVLAfvpaeGLFGIP 350
Cdd:MTH00029 318 YLPLSLGLVILTAGILI-----GFNGVP 340
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 7-328 3.83e-75

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 236.41  E-value: 3.83e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    7 ALLITLLKAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPIL 86
Cdd:MTH00040   2 SVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   87 AIGMALTAFGGIPAGPPGslfgtdpwvYNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGMGL 166
Cdd:MTH00040  82 FLFLALLLWSLIPVPTPT---------LNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGL 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  167 SVLGLLMLVGSTNFLDIVEWQagprGHGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWALFQ 246
Cdd:MTH00040 153 ILLSLVIFSGSFSLSSISNSQ----NGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFF 228

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  247 MAEYVNIMTASALMSTLFFGGyrgptflEPLIPGISSWPLVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKLTLPL 326
Cdd:MTH00040 229 IAEYANIIFMNLLSVILFLGG-------GSPFNEIFPINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPL 301


                 ..
gi 81789325  327 AL 328
Cdd:MTH00040 302 SI 303
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 8-328 1.06e-74

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 234.90  E-value: 1.06e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    8 LLITLLkavLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPILA 87
Cdd:MTH00104   2 FMINIL---LLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILA 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   88 IGMALTAFggIPAGPPGSLFgtdpwvyNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGMGLS 167
Cdd:MTH00104  79 LTLALTMW--IPLPMPYPLI-------NMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAII 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  168 VLGLLMLVGSTNFLDIVEWQAgprgHGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWALFQM 247
Cdd:MTH00104 150 LLSVLLMNGSFTLSTLITTQE----HLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFM 225

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  248 AEYVNIMTASALMSTLFFGgyrgpTFLEPLIPGISSwplVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKLTLPLA 327
Cdd:MTH00104 226 AEYANIIMMNALTTILFLG-----AFHNPYMPELYT---TNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLT 297


                 .
gi 81789325  328 L 328
Cdd:MTH00104 298 L 298
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 8-332 3.31e-74

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 233.74  E-value: 3.31e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    8 LLITLLKAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPILA 87
Cdd:MTH00071   4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   88 IGMALTAFggIPAGPPGSLfgtdpwvYNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGMGLS 167
Cdd:MTH00071  84 LTLALIIW--TPLPMPNNL-------SNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLI 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  168 VLGLLMLVGS---TNFLDIVEwqagprgHGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWAL 244
Cdd:MTH00071 155 LLCLILLTGGfslMNFNTTQE-------FMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFAL 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  245 FQMAEYVNIMTASALMSTLFFGgyrgpTFLEPLIPGISSwplVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKLTL 324
Cdd:MTH00071 228 FFLAEYANILMMNTLSTILFLG-----STYNHLQPELST---MNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFL 299


                 ....*...
gi 81789325  325 PLALVNTL 332
Cdd:MTH00071 300 PITLAMTI 307
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 5-328 2.04e-72

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 229.49  E-value: 2.04e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    5 LSALLITLLKAVLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAP 84
Cdd:MTH00134   2 LSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATP 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   85 ILAIGMALTAFGGIPAGPPgslfgtdpwVYNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGM 164
Cdd:MTH00134  82 MLALTLALTLWAPMPMPYP---------VTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSL 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  165 GLSVLGLLMLVGSTNFLDIVEWQAGPrghgWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWAL 244
Cdd:MTH00134 153 GLILLSVIIFTGGFTLQTFNTAQESI----WLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFAL 228

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  245 FQMAEYVNIMTASALMSTLFFGgyrgpTFLEPLIPGISSwplVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKLTL 324
Cdd:MTH00134 229 FFLAEYANILLMNTLSAILFLG-----ASHIPTLPELTT---INLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFL 300


                 ....
gi 81789325  325 PLAL 328
Cdd:MTH00134 301 PLTL 304
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 10-334 2.04e-68

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 218.50  E-value: 2.04e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   10 ITLLKAVLVALAL-LTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPILAI 88
Cdd:MTH00010   3 ISFFISILLSYVMaLLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSL 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   89 GMALTAFGGIPAGPPgslfgtdpwVYNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGMGLSV 168
Cdd:MTH00010  83 ILALLLWSLYPHKHP---------SFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLIL 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  169 LGLLMLVGSTNFLDIVEWQagprgHGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWALFQMA 248
Cdd:MTH00010 154 LSALLILQTFSFSKIIMSQ-----YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMA 228

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  249 EYVNIMTASaLMSTLFFGGYRGPTFLEPLipgisswplvWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKLTLPLAL 328
Cdd:MTH00010 229 EYANILIMS-LFTSVFFTSFIPSIFISDL----------MLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSL 297


                 ....*.
gi 81789325  329 VNTLVV 334
Cdd:MTH00010 298 TSLMIS 303
ndhA CHL00032
NADH dehydrogenase subunit 1
 32-336 3.33e-66

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 214.43  E-value: 3.33e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   32 IERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPILAIGMALTAFGGIPagppgslFGTDP 111
Cdd:CHL00032  50 LEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIP-------FGYHL 122

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  112 WVYNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGMGLSVLGLLMLVGSTNFLDIVEWQAGPR 191
Cdd:CHL00032 123 VLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYG 202

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  192 GHGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWALFQMAEYVNIMTASALMSTLFFGGYRGP 271
Cdd:CHL00032 203 FWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLS 282

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  272 tfleplIPGISSWPL----------------VWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGWKLTLPLALVNTLVVA 335
Cdd:CHL00032 283 ------IPYIFIPELfeinktggvfgttigiFITLAKTYLFLFISITTRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTT 356


                 .
gi 81789325  336 A 336
Cdd:CHL00032 357 S 357
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 16-329 1.44e-43

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 153.13  E-value: 1.44e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   16 VLVALALLTAFAYMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPILA-IGMALTA 94
Cdd:MTH00090   3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSfVVMYLEW 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   95 FggipagppgslfgTDPWVY---NLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGMGLSVLGL 171
Cdd:MTH00090  83 F-------------VLPYFFdflSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSI 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  172 LMLVGSTNFldivewqagprgHGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWALFQMAEYV 251
Cdd:MTH00090 150 MLHNNSFSF------------VSSFSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYG 217

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 81789325  252 NIMTASALMSTLFFGgyrgptfleplipgisswpLVWLIAKIAFFMFLFIwvRATLPRLRYDQLMRLGWKLTLPLALV 329
Cdd:MTH00090 218 SLIFFSVLTSVLFFK-------------------FSFLMLFLIFSLLIFI--RSSYPRFRYDMMMSMFWFKFLPLSLI 274
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 9-334 4.17e-40

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 144.30  E-value: 4.17e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325    9 LITLLKAVLVALaLLTAFayMTLIERRLLGRIQLRPGPNRVGPMGLLQPLADAIKSIFKEDVTVTLADKLVYTLAPILAI 88
Cdd:MTH00058   4 LVSGLEGLLIIL-LLVAF--FILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   89 GMALTAFggipagppgSLFGTDPWVYNLDAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISYELGMGLSV 168
Cdd:MTH00058  81 LLVVFYC---------FIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIV 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  169 LGLLMLVGSTNFLDIVEwqagprGHGWLILFQVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSIKWALFQMA 248
Cdd:MTH00058 152 IFCGLCYGSYSLVDFYY------SGWLSVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFAC 225

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  249 EYVNIMTASALMSTLFFGGYrgptfleplipgisswpLVWLIakIAFFMFLFIWVRATLPRLRYDQLMRLGWKLTLPLAL 328
Cdd:MTH00058 226 EYLIIFIFSWLGSVLFFGGG-----------------FVSIM--LLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLI 286


                 ....*.
gi 81789325  329 VNTLVV 334
Cdd:MTH00058 287 LSLFVI 292
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
1-334 5.41e-37

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 136.08  E-value: 5.41e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325   1 MPDWLSALLITLLkavLVALALLtafayMTLIERRLLGRIQLRPGPnrvgpmGLLQPLADAIKSIFKEDVtVTLADKLVY 80
Cdd:COG0650   1 MMLILLALLQLLL---ALLLAPL-----LLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETV-VPETASWLF 65

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325  81 TLAPILAIGMALTAFGGIPAGPPGSLFGTDpwvynldAGILALLALTSMGVYGIFLGGWASGSKYPMLGSLRSSAQMISY 160
Cdd:COG0650  66 RAAPYVALAAMLLAALLVPVLTTGPPLSFS-------GDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALA 138

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325 161 ELGMGLSVLGLLMLVGSTNFLDIVEWQAGPRGHGWLILFqVFAFALFMVSSFAEVNRTPFDLPEAEQELVAGYLTEYSSI 240
Cdd:COG0650 139 EPPLLLVLFALALLAGSTSLSDIVAYQAAHGPLLLSPSL-LLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGR 217

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81789325 241 KWALFQMAEYVNIMTASALMSTLFFGGYRGPTFLeplipgissWPLVWLIAKIAFFMFLFIWVRATLPRLRYDQLMRLGW 320
Cdd:COG0650 218 HLALLELAAALKLFVLLSLFVNLFLPWGIALTLL---------LALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLW 288

                       330
                ....*....|....
gi 81789325 321 KLTLpLALVNTLVV 334
Cdd:COG0650 289 TAFL-LALLALLLA 301
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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