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Conserved domains on  [gi|1717881393|gb|QDY83454|]
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hypothetical protein FQU75_08535 [Paenibacillus polymyxa]

Protein Classification

Ig-like domain-containing protein( domain architecture ID 10492955)

bacterial immunoglobulin (Ig)-like domain-containing protein may be a cell surface protein and may play a vital role in host-pathogen interactions; similar to Bacillus subtilis uncharacterized protein YlqB and Escherichia coli invasin-like protein

CATH:  2.60.40.10
Gene Ontology:  GO:0005515
PubMed:  9417933|33355339|10436082|34986320|7932691|22724448
SCOP:  3000070

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Big_1 pfam02369
Bacterial Ig-like domain (group 1); This family consists of bacterial domains with an Ig-like ...
 377-436 1.82e-04

Bacterial Ig-like domain (group 1); This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial surface proteins such as intimins and invasins involved in pathogenicity.


:

Pssm-ID: 460541 [Multi-domain]  Cd Length: 64  Bit Score: 39.46  E-value: 1.82e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717881393 377 NGNTSLTVKGVVTTTDNYPVANAPVNVTwlnqnwteSSGNRTRTGTGYTDQNGAFSVTLS 436
Cdd:pfam02369   2 DGVDTNTVTATVTDANGNPVPGATVTFS--------ASGGTLSASSGTTDANGQATVTLT 53
 
Name Accession Description Interval E-value
Big_1 pfam02369
Bacterial Ig-like domain (group 1); This family consists of bacterial domains with an Ig-like ...
 377-436 1.82e-04

Bacterial Ig-like domain (group 1); This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial surface proteins such as intimins and invasins involved in pathogenicity.


Pssm-ID: 460541 [Multi-domain]  Cd Length: 64  Bit Score: 39.46  E-value: 1.82e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717881393 377 NGNTSLTVKGVVTTTDNYPVANAPVNVTwlnqnwteSSGNRTRTGTGYTDQNGAFSVTLS 436
Cdd:pfam02369   2 DGVDTNTVTATVTDANGNPVPGATVTFS--------ASGGTLSASSGTTDANGQATVTLT 53
 
Name Accession Description Interval E-value
Big_1 pfam02369
Bacterial Ig-like domain (group 1); This family consists of bacterial domains with an Ig-like ...
 377-436 1.82e-04

Bacterial Ig-like domain (group 1); This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial surface proteins such as intimins and invasins involved in pathogenicity.


Pssm-ID: 460541 [Multi-domain]  Cd Length: 64  Bit Score: 39.46  E-value: 1.82e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1717881393 377 NGNTSLTVKGVVTTTDNYPVANAPVNVTwlnqnwteSSGNRTRTGTGYTDQNGAFSVTLS 436
Cdd:pfam02369   2 DGVDTNTVTATVTDANGNPVPGATVTFS--------ASGGTLSASSGTTDANGQATVTLT 53
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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