|
Name |
Accession |
Description |
Interval |
E-value |
| MrcA |
COG5009 |
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis]; |
1-834 |
0e+00 |
|
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 444033 [Multi-domain] Cd Length: 785 Bit Score: 1077.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 1 MRIAKIIFSALLSLLVLGGVIGGLLYMHFKSDLPDVATLKNVELQQPMQIFTLDGKLIGEVGEERRIPVKLDDIPPMLVK 80
Cdd:COG5009 1 MRLLKILLILLLLLLLLGALAVAGLYLYLSPDLPDVETLKDYQPPTPSRVYSADGKLIAEFGEERRIPVPIEEIPPLLIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 81 AILATEDARFYEHKGIDPKGIMRAIWR--TSQGDTQGASTITQQLAKNFFLTPERSLERKAKEAILALEIEQVLSKNEIL 158
Cdd:COG5009 81 AFLAAEDKRFYEHPGVDPIGIARAAVVnlRTGRRVQGGSTITQQVAKNFLLSPERTLTRKIKEAILALRIEQELSKDEIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 159 ELYLNKIYLGYRSHGVAAAAKTYFNKALKDLTLSEIAIIAGLPKAPSTMNPLYSVKRAEDRRNVVLGRMLETGDITKEEY 238
Cdd:COG5009 161 ELYLNKIYLGHRAYGVAAAAQTYFGKSLDELTLAEAAMLAGLPKAPSRYNPIRNPERALERRNYVLGRMLELGYITQAEY 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 239 EKAKAEPVVANYYGATLEFRADYVTEMVRQEIVKRYGENIAYNKGLKVYATVLSADQKAAQDALRENLIDYDRRHGWRGA 318
Cdd:COG5009 241 EAAKAEPLTARYHGASAEVDAPYFAEMVRRELVERYGEDALYTGGLKVYTTLDPRLQEAAEKALRDGLLAYDRRHGYRGP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 319 EK-LWTGSSAWDdekiiDHLSKLPKSEPFTPAVVMQADKSKYTILLANGDISVLKRTNASFA----------------PK 381
Cdd:COG5009 321 EAhLDLAEEDWD-----EALAEVPDVGDLRPAVVLEVDDKSARVGLRDGETGTLPLEGLKWArpyindnrrgpapksaSD 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 382 GLKAGEQIWVRQNKNREWALGQIPEVNSALVSINSENGAIESIVGGFSFEQSRFNRATQSLVQVGSAIKPFIYTAAMNKG 461
Cdd:COG5009 396 VLKPGDVIRVRPVADGGWRLRQIPEVQGALVALDPHTGAVLALVGGFDFEQSKFNRATQAKRQPGSSFKPFVYAAALDNG 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 462 LSLSTTISDSPIVIK-KKGQKEWRPKNADGVYGGPLRTRVALGKSKNMVAIRILQMAGIDYVADYLQRFGFNrNQYVATE 540
Cdd:COG5009 476 YTPATIINDAPIVFDdGGGGGVWRPKNYSGKFYGPTTLREALEKSRNLVTVRLLQDVGIDYVIDYAERFGIY-SKLPPNL 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 541 SLALGAASFTPLEMARAYAVFNNGGYLIEPYIIDRIIDAQGYELYQANPVVACNSCDSPvvypepkyfesvkihdeaqvg 620
Cdd:COG5009 555 SLALGSGEVTPLEMARAYAVFANGGYRVEPYLIDRIEDRNGKVIYRADPARACEDCDAA--------------------- 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 621 vqtianssnnddddvveDVGDSEPELQannseknapslmaesshhvkglRYAPHVISDELAFLMRSALATAItgepeygW 700
Cdd:COG5009 614 -----------------EWDGAEPRLP----------------------DPAEQVIDPRTAYQMTSMLRGVV-------Q 647
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 701 RGTSYKMLNtIKRaDVGGKTGTTNNAKATWYAGFGANISTVVYVGFDDNKRvLGRGASGSSTALPAWTNYMKVALSDKPV 780
Cdd:COG5009 648 RGTGRRARA-LGR-DIAGKTGTTNDSKDAWFVGFTPDLVAGVWVGFDDPRS-LGRGETGGRAALPIWIDFMKAALKDKPE 724
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*....
gi 1721601831 781 EKSTLPKNIIEVNIDPNSGFL-----GNGRKEYFIKGTEPTKRYIVERAYTEKAPQKTE 834
Cdd:COG5009 725 KPFPVPEGIVTVRIDPKTGLLaspgdPDAIFEAFKPGTEPTESASEDLGPDASEGTGEG 783
|
|
| mrcA |
PRK11636 |
penicillin-binding protein 1a; Provisional |
25-822 |
0e+00 |
|
penicillin-binding protein 1a; Provisional
Pssm-ID: 183248 [Multi-domain] Cd Length: 850 Bit Score: 973.45 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 25 LYMHFKSDLPDVATLKNVELQQPMQIFTLDGKLIGEVGEERRIPVKLDDIPPMLVKAILATEDARFYEHKGIDPKGIMRA 104
Cdd:PRK11636 25 LYRYIEPQLPDVATLKDVRLQTPMQVYSADGELIAQYGEKRRIPLTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIFRA 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 105 --IWRTSQGDTQGASTITQQLAKNFFLTPERSLERKAKEAILALEIEQVLSKNEILELYLNKIYLGYRSHGVAAAAKTYF 182
Cdd:PRK11636 105 asVALFSGHASQGASTITQQLARNFFLSPERTLMRKIKEAFLAIRIEQLLTKDEILELYLNKIYLGYRAYGVGAAAQVYF 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 183 NKALKDLTLSEIAIIAGLPKAPSTMNPLYSVKRAEDRRNVVLGRMLETGDITKEEYEKAKAEPVVANYYGATLEFRADYV 262
Cdd:PRK11636 185 GKTVDQLTLSEMAVIAGLPKAPSTFNPLYSMDRAVARRNVVLSRMLDEGYITQAQYDQARSEPIVANYHAPEIAFSAPYL 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 263 TEMVRQEIVKRYGENiAYNKGLKVYATVLSADQKAAQDALRENLIDYDRRHGWRG-AEKLWT-GSSAWDDEKIIDHLSKL 340
Cdd:PRK11636 265 SEMVRQEMYNRYGEN-AYEDGYRVYTTITRKVQQAAQQAVRNNVLDYDMRHGYRGpANVLWKvGESAWDNKKITDTLKAL 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 341 PKSEPFTPAVVMQADKSKYTILLANGDISVLKRTNASFA------------PKG----LKAGEQIWVRQNKNrEWALGQI 404
Cdd:PRK11636 344 PTYGPLLPAVVTSANPQEATAMLADGSSVALPMEGVRWArpyrsdtqqgptPRKvtdvVQTGQQIWVRQVDD-AWWLAQV 422
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 405 PEVNSALVSINSENGAIESIVGGFSFEQSRFNRATQSLVQVGSAIKPFIYTAAMNKGLSLSTTISDSPIVIKKKGQ-KEW 483
Cdd:PRK11636 423 PDVNSALVSINPQNGAVMALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLNDVPISRWDAGAgSDW 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 484 RPKNADGVYGGPLRTRVALGKSKNMVAIRILQMAGIDYVADYLQRFGFNRNQYVATESLALGAASFTPLEMARAYAVFNN 563
Cdd:PRK11636 503 RPKNSPPQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSASFTPMQVARGYAVMAN 582
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 564 GGYLIEPYIIDRIIDAQGYELYQANPVVACNSCDSPVVYPEPKyfESVKIHDEAqvgVQTIANSSNNddddvvEDVGDSE 643
Cdd:PRK11636 583 GGFLVDPYFISKIENDQGGVIFEAKPKVACPECDIPVIYGDTQ--KSNVLENDD---VENVATSQEQ------QNSSVPM 651
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 644 PELqannsEKNAPSLMAESSHHvkglRYAPHVISDELAFLMRSALATAITGEPeyGWRGTSYKMLNTIKRADVGGKTGTT 723
Cdd:PRK11636 652 PQL-----EQANQALVAQNGAQ----EYAPHVINTPLAFLIKSALNTNIFGEP--GWMGTGWRAGRDLKRRDIGGKTGTT 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 724 NNAKATWYAGFGANISTVVYVGFDDNKRVLGRGAS-------------GSSTALPAWTNYMKVALSDKPVEKSTLPKNII 790
Cdd:PRK11636 721 NSSKDAWFSGYGPGVVTSVWIGFDDHRRDLGRTTAsgaikdqisgyegGAKSAQPAWDDYMKAALEGVPEQPLTPPPGIV 800
|
810 820 830
....*....|....*....|....*....|....*
gi 1721601831 791 EVNIDPNSGFL---GNGRKEYFIKGTEPTKRYIVE 822
Cdd:PRK11636 801 TVNIDRSTGKLangGNSREEYFIEGTQPTQQAVHE 835
|
|
| PBP_1a_fam |
TIGR02074 |
penicillin-binding protein, 1A family; Bacterial that synthesize a cell wall of peptidoglycan ... |
65-777 |
0e+00 |
|
penicillin-binding protein, 1A family; Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273955 [Multi-domain] Cd Length: 531 Bit Score: 539.54 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 65 RRIPVKLDDIPPMLVKAILATEDARFYEHKGIDPKGIMRAIWR--TSQGDTQGASTITQQLAKNFFLTPERSLERKAKEA 142
Cdd:TIGR02074 1 RREYVPIDDIPENLINAFLAIEDRRFYDHFGIDLKGIGRAAVAniTSGRVLEGGSTITQQLAKNLYLTNERTITRKIQEA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 143 ILALEIEQVLSKNEILELYLNKIYLGYRSHGVAAAAKTYFNKALKDLTLSEIAIIAGLPKAPSTMNPLYSVKRAEDRRNV 222
Cdd:TIGR02074 81 LLALKLEQKLSKDEILELYLNRIYFGNGAYGIEAAAQFYFGKSVNDLTLAEAAMLAGLPKAPSAYNPFKNPERAKDRRNL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 223 VLGRMLETGDITKEEYEKAKAEPVVANYYGAT-LEFRADYVTEMVRQEIVKRYGENIaYNKGLKVYATVLSADQKAAQDA 301
Cdd:TIGR02074 161 VLSNMVENGYITAEEAEEAINEPIQLYLQTKKsEQYKAPYFVDYVIQELEEEYGEEL-YTGGLKIYTTLDLDAQKAAEKV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 302 LRENLIDYDRRHGwrgaeklwtgssawddekiidhlsklpksepftpavvmqadkskytillangdisvlkrtnasfapk 381
Cdd:TIGR02074 240 LNTGLRVAGRRDG------------------------------------------------------------------- 252
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 382 glkageqiwvrqnknrewalgqiPEVNSALVSINSENGAIESIVGGFSFEQSRFNRATQSLVQVGSAIKPFIYTAAMNKG 461
Cdd:TIGR02074 253 -----------------------DDLQAALVAIDPDTGAVRALVGGRDYGKSQFNRATQAKRQPGSTFKPFVYAAALEKG 309
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 462 LSLSTTISDSPIVIKKKGqkEWRPKNADGVYGGPLRTRVALGKSKNMVAIRILQMAGIDYVADYLQRFGFNrNQYVATES 541
Cdd:TIGR02074 310 LTPATIVNDEPITYNGNG--PWSPKNYGGGYRGNVTLRQALAQSRNIPAVRLLQEVGLDKVVALAKRFGIT-SPLDPVLS 386
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 542 LALGAASFTPLEMARAYAVFNNGGYLIEPYIIDRIIDAQGYELYQANPvvacnscdspvvypepkyfesvkihDEAQvgv 621
Cdd:TIGR02074 387 LALGTVEVSPLEMASAYAVFANGGKYVEPHGIRKIVDRDGKVIYENKP-------------------------KTTQ--- 438
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 622 qtianssnnddddvvedvgdsepelqannseknapslmaesshhvkglryaphVISDELAFLMRSALATAITgepeygwR 701
Cdd:TIGR02074 439 -----------------------------------------------------VISPATAYIMTDMLKGVVE-------S 458
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1721601831 702 GTSYKMlnTIKRADVGGKTGTTNNAKATWYAGFGANISTVVYVGFDDNKRvLGRGASGSSTALPAWTNYMKVALSD 777
Cdd:TIGR02074 459 GTGRSA--RLPGRPVAGKTGTTQNWRDAWFVGYTPYYVTAVWVGYDDKKT-LGKSGTGGGLAAPIWRDFMAEALKN 531
|
|
| Transgly |
pfam00912 |
Transglycosylase; The penicillin-binding proteins are bifunctional proteins consisting of ... |
54-228 |
2.88e-88 |
|
Transglycosylase; The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerization of murein glycan chains.
Pssm-ID: 459993 [Multi-domain] Cd Length: 177 Bit Score: 277.48 E-value: 2.88e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 54 DGKLIGEVGEERRIPVKLDDIPPMLVKAILATEDARFYEHKGIDPKGIMRAIWR--TSQGDTQGASTITQQLAKNFFLTP 131
Cdd:pfam00912 1 DGTLLAELGEENREYVPLDDIPPALKNAVLAIEDRRFYEHGGVDPKGIARALLSnlRSGRIVQGGSTITQQLAKNLFLTP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 132 ERSLERKAKEAILALEIEQVLSKNEILELYLNKIYLGYRSHGVAAAAKTYFNKALKDLTLSEIAIIAGLPKAPSTMNPLY 211
Cdd:pfam00912 81 ERTLTRKLKEAVLALKLERRYSKDEILEAYLNTVYFGRGAYGIEAAARAYFGKDASDLTLAEAALLAGLPQAPSRYNPLR 160
|
170
....*....|....*..
gi 1721601831 212 SVKRAEDRRNVVLGRML 228
Cdd:pfam00912 161 NPERAKRRRNLVLDRMV 177
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| MrcA |
COG5009 |
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis]; |
1-834 |
0e+00 |
|
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 444033 [Multi-domain] Cd Length: 785 Bit Score: 1077.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 1 MRIAKIIFSALLSLLVLGGVIGGLLYMHFKSDLPDVATLKNVELQQPMQIFTLDGKLIGEVGEERRIPVKLDDIPPMLVK 80
Cdd:COG5009 1 MRLLKILLILLLLLLLLGALAVAGLYLYLSPDLPDVETLKDYQPPTPSRVYSADGKLIAEFGEERRIPVPIEEIPPLLIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 81 AILATEDARFYEHKGIDPKGIMRAIWR--TSQGDTQGASTITQQLAKNFFLTPERSLERKAKEAILALEIEQVLSKNEIL 158
Cdd:COG5009 81 AFLAAEDKRFYEHPGVDPIGIARAAVVnlRTGRRVQGGSTITQQVAKNFLLSPERTLTRKIKEAILALRIEQELSKDEIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 159 ELYLNKIYLGYRSHGVAAAAKTYFNKALKDLTLSEIAIIAGLPKAPSTMNPLYSVKRAEDRRNVVLGRMLETGDITKEEY 238
Cdd:COG5009 161 ELYLNKIYLGHRAYGVAAAAQTYFGKSLDELTLAEAAMLAGLPKAPSRYNPIRNPERALERRNYVLGRMLELGYITQAEY 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 239 EKAKAEPVVANYYGATLEFRADYVTEMVRQEIVKRYGENIAYNKGLKVYATVLSADQKAAQDALRENLIDYDRRHGWRGA 318
Cdd:COG5009 241 EAAKAEPLTARYHGASAEVDAPYFAEMVRRELVERYGEDALYTGGLKVYTTLDPRLQEAAEKALRDGLLAYDRRHGYRGP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 319 EK-LWTGSSAWDdekiiDHLSKLPKSEPFTPAVVMQADKSKYTILLANGDISVLKRTNASFA----------------PK 381
Cdd:COG5009 321 EAhLDLAEEDWD-----EALAEVPDVGDLRPAVVLEVDDKSARVGLRDGETGTLPLEGLKWArpyindnrrgpapksaSD 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 382 GLKAGEQIWVRQNKNREWALGQIPEVNSALVSINSENGAIESIVGGFSFEQSRFNRATQSLVQVGSAIKPFIYTAAMNKG 461
Cdd:COG5009 396 VLKPGDVIRVRPVADGGWRLRQIPEVQGALVALDPHTGAVLALVGGFDFEQSKFNRATQAKRQPGSSFKPFVYAAALDNG 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 462 LSLSTTISDSPIVIK-KKGQKEWRPKNADGVYGGPLRTRVALGKSKNMVAIRILQMAGIDYVADYLQRFGFNrNQYVATE 540
Cdd:COG5009 476 YTPATIINDAPIVFDdGGGGGVWRPKNYSGKFYGPTTLREALEKSRNLVTVRLLQDVGIDYVIDYAERFGIY-SKLPPNL 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 541 SLALGAASFTPLEMARAYAVFNNGGYLIEPYIIDRIIDAQGYELYQANPVVACNSCDSPvvypepkyfesvkihdeaqvg 620
Cdd:COG5009 555 SLALGSGEVTPLEMARAYAVFANGGYRVEPYLIDRIEDRNGKVIYRADPARACEDCDAA--------------------- 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 621 vqtianssnnddddvveDVGDSEPELQannseknapslmaesshhvkglRYAPHVISDELAFLMRSALATAItgepeygW 700
Cdd:COG5009 614 -----------------EWDGAEPRLP----------------------DPAEQVIDPRTAYQMTSMLRGVV-------Q 647
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 701 RGTSYKMLNtIKRaDVGGKTGTTNNAKATWYAGFGANISTVVYVGFDDNKRvLGRGASGSSTALPAWTNYMKVALSDKPV 780
Cdd:COG5009 648 RGTGRRARA-LGR-DIAGKTGTTNDSKDAWFVGFTPDLVAGVWVGFDDPRS-LGRGETGGRAALPIWIDFMKAALKDKPE 724
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*....
gi 1721601831 781 EKSTLPKNIIEVNIDPNSGFL-----GNGRKEYFIKGTEPTKRYIVERAYTEKAPQKTE 834
Cdd:COG5009 725 KPFPVPEGIVTVRIDPKTGLLaspgdPDAIFEAFKPGTEPTESASEDLGPDASEGTGEG 783
|
|
| mrcA |
PRK11636 |
penicillin-binding protein 1a; Provisional |
25-822 |
0e+00 |
|
penicillin-binding protein 1a; Provisional
Pssm-ID: 183248 [Multi-domain] Cd Length: 850 Bit Score: 973.45 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 25 LYMHFKSDLPDVATLKNVELQQPMQIFTLDGKLIGEVGEERRIPVKLDDIPPMLVKAILATEDARFYEHKGIDPKGIMRA 104
Cdd:PRK11636 25 LYRYIEPQLPDVATLKDVRLQTPMQVYSADGELIAQYGEKRRIPLTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIFRA 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 105 --IWRTSQGDTQGASTITQQLAKNFFLTPERSLERKAKEAILALEIEQVLSKNEILELYLNKIYLGYRSHGVAAAAKTYF 182
Cdd:PRK11636 105 asVALFSGHASQGASTITQQLARNFFLSPERTLMRKIKEAFLAIRIEQLLTKDEILELYLNKIYLGYRAYGVGAAAQVYF 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 183 NKALKDLTLSEIAIIAGLPKAPSTMNPLYSVKRAEDRRNVVLGRMLETGDITKEEYEKAKAEPVVANYYGATLEFRADYV 262
Cdd:PRK11636 185 GKTVDQLTLSEMAVIAGLPKAPSTFNPLYSMDRAVARRNVVLSRMLDEGYITQAQYDQARSEPIVANYHAPEIAFSAPYL 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 263 TEMVRQEIVKRYGENiAYNKGLKVYATVLSADQKAAQDALRENLIDYDRRHGWRG-AEKLWT-GSSAWDDEKIIDHLSKL 340
Cdd:PRK11636 265 SEMVRQEMYNRYGEN-AYEDGYRVYTTITRKVQQAAQQAVRNNVLDYDMRHGYRGpANVLWKvGESAWDNKKITDTLKAL 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 341 PKSEPFTPAVVMQADKSKYTILLANGDISVLKRTNASFA------------PKG----LKAGEQIWVRQNKNrEWALGQI 404
Cdd:PRK11636 344 PTYGPLLPAVVTSANPQEATAMLADGSSVALPMEGVRWArpyrsdtqqgptPRKvtdvVQTGQQIWVRQVDD-AWWLAQV 422
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 405 PEVNSALVSINSENGAIESIVGGFSFEQSRFNRATQSLVQVGSAIKPFIYTAAMNKGLSLSTTISDSPIVIKKKGQ-KEW 483
Cdd:PRK11636 423 PDVNSALVSINPQNGAVMALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLNDVPISRWDAGAgSDW 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 484 RPKNADGVYGGPLRTRVALGKSKNMVAIRILQMAGIDYVADYLQRFGFNRNQYVATESLALGAASFTPLEMARAYAVFNN 563
Cdd:PRK11636 503 RPKNSPPQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSASFTPMQVARGYAVMAN 582
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 564 GGYLIEPYIIDRIIDAQGYELYQANPVVACNSCDSPVVYPEPKyfESVKIHDEAqvgVQTIANSSNNddddvvEDVGDSE 643
Cdd:PRK11636 583 GGFLVDPYFISKIENDQGGVIFEAKPKVACPECDIPVIYGDTQ--KSNVLENDD---VENVATSQEQ------QNSSVPM 651
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 644 PELqannsEKNAPSLMAESSHHvkglRYAPHVISDELAFLMRSALATAITGEPeyGWRGTSYKMLNTIKRADVGGKTGTT 723
Cdd:PRK11636 652 PQL-----EQANQALVAQNGAQ----EYAPHVINTPLAFLIKSALNTNIFGEP--GWMGTGWRAGRDLKRRDIGGKTGTT 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 724 NNAKATWYAGFGANISTVVYVGFDDNKRVLGRGAS-------------GSSTALPAWTNYMKVALSDKPVEKSTLPKNII 790
Cdd:PRK11636 721 NSSKDAWFSGYGPGVVTSVWIGFDDHRRDLGRTTAsgaikdqisgyegGAKSAQPAWDDYMKAALEGVPEQPLTPPPGIV 800
|
810 820 830
....*....|....*....|....*....|....*
gi 1721601831 791 EVNIDPNSGFL---GNGRKEYFIKGTEPTKRYIVE 822
Cdd:PRK11636 801 TVNIDRSTGKLangGNSREEYFIEGTQPTQQAVHE 835
|
|
| MrcB |
COG0744 |
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall ... |
21-795 |
0e+00 |
|
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440507 [Multi-domain] Cd Length: 630 Bit Score: 619.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 21 IGGLLYMHFKsDLPDVATLKNVELQQPMQIFTLDGKLIGEVGEERRIPVKLDDIPPMLVKAILATEDARFYEHKGIDPKG 100
Cdd:COG0744 30 LAGLVALYVA-DLPDPEELEDLALPQTSTIYDRDGTLIATLGDENREWVPLDQIPPHLKDAVVAIEDRRFYEHGGVDPKG 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 101 IMRAIWR--TSQGDTQGASTITQQLAKNFFLTPERSLERKAKEAILALEIEQVLSKNEILELYLNKIYLGYRSHGVAAAA 178
Cdd:COG0744 109 IARALVAnlTAGGVVQGGSTITQQLVKNLFLSNERTLSRKLKEALLALKLERKYSKDEILELYLNTVYFGRGAYGIEAAA 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 179 KTYFNKALKDLTLSEIAIIAGLPKAPSTMNPLYSVKRAEDRRNVVLGRMLETGDITKEEYEKAKAEPV-VANYYGATLEF 257
Cdd:COG0744 189 QYYFGKSASDLTLAEAALLAGLVKAPSYYDPYRNPEAAKERRNLVLDRMVEQGYITQAEADAAKAEPLtLVPPPNGAAAG 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 258 RADYVTEMVRQEIVKRYGENIAYNKGLKVYATVLSADQKAAQDALRENLIDydrrhgwrgaeklwtgssawddekiidhl 337
Cdd:COG0744 269 KYPYFVDYVRRELEELLGEDDLYRGGLKIYTTLDPKLQKAAEKAVKNVLPE----------------------------- 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 338 sklpksepftpavvmqadkskytillangdisvlkrtnasfapkglkageqiwvrqnknrewalGQIPEVNSALVSINSE 417
Cdd:COG0744 320 ----------------------------------------------------------------GKPGGLQAALVVVDPK 335
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 418 NGAIESIVGGFSFEQSRFNRATQSLVQVGSAIKPFIYTAAMNKGLSLSTTISDSPIVIKKKGqkeWRPKNADGVYGGPLR 497
Cdd:COG0744 336 TGEVLAMVGGRDYGKSQFNRATQAKRQPGSTFKPFVYAAALEQGYTPATTVDDEPVTFPGGG---WSPKNYDGRYRGPVT 412
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 498 TRVALGKSKNMVAIRILQMAGIDYVADYLQRFGFNRNQYvATESLALGAASFTPLEMARAYAVFNNGGYLIEPYIIDRII 577
Cdd:COG0744 413 LREALANSLNTPAVRLAQEVGLDKVVDTARRLGITSPLD-PNPSLALGTSEVSPLEMASAYATFANGGVYVEPHAITKVT 491
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 578 DAQGYELYQANPvvacnscdspvvypepkyfesvkihdeaqvgvqtianssnnddddvvedvgdsEPElqannseknaps 657
Cdd:COG0744 492 DADGKVLYEAKP-----------------------------------------------------KCE------------ 506
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 658 lmaesshhvkglryapHVISDELAFLMRSALATAITgepeygwRGTSYKMLntIKRADVGGKTGTTNNAKATWYAGFGAN 737
Cdd:COG0744 507 ----------------QVISPEVAYLMTDMLQDVVT-------SGTGRAAR--LPGRPVAGKTGTTNDNRDAWFVGYTPQ 561
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*...
gi 1721601831 738 ISTVVYVGFDDNKRVlgRGASGSSTALPAWTNYMKVALSDKPVEKSTLPKNIIEVNID 795
Cdd:COG0744 562 LVTAVWVGNDDNSPM--GYVTGGSLPAPIWRDFMEAALEGLPVEDFPKPSGVVRIDEP 617
|
|
| PBP_1a_fam |
TIGR02074 |
penicillin-binding protein, 1A family; Bacterial that synthesize a cell wall of peptidoglycan ... |
65-777 |
0e+00 |
|
penicillin-binding protein, 1A family; Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273955 [Multi-domain] Cd Length: 531 Bit Score: 539.54 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 65 RRIPVKLDDIPPMLVKAILATEDARFYEHKGIDPKGIMRAIWR--TSQGDTQGASTITQQLAKNFFLTPERSLERKAKEA 142
Cdd:TIGR02074 1 RREYVPIDDIPENLINAFLAIEDRRFYDHFGIDLKGIGRAAVAniTSGRVLEGGSTITQQLAKNLYLTNERTITRKIQEA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 143 ILALEIEQVLSKNEILELYLNKIYLGYRSHGVAAAAKTYFNKALKDLTLSEIAIIAGLPKAPSTMNPLYSVKRAEDRRNV 222
Cdd:TIGR02074 81 LLALKLEQKLSKDEILELYLNRIYFGNGAYGIEAAAQFYFGKSVNDLTLAEAAMLAGLPKAPSAYNPFKNPERAKDRRNL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 223 VLGRMLETGDITKEEYEKAKAEPVVANYYGAT-LEFRADYVTEMVRQEIVKRYGENIaYNKGLKVYATVLSADQKAAQDA 301
Cdd:TIGR02074 161 VLSNMVENGYITAEEAEEAINEPIQLYLQTKKsEQYKAPYFVDYVIQELEEEYGEEL-YTGGLKIYTTLDLDAQKAAEKV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 302 LRENLIDYDRRHGwrgaeklwtgssawddekiidhlsklpksepftpavvmqadkskytillangdisvlkrtnasfapk 381
Cdd:TIGR02074 240 LNTGLRVAGRRDG------------------------------------------------------------------- 252
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 382 glkageqiwvrqnknrewalgqiPEVNSALVSINSENGAIESIVGGFSFEQSRFNRATQSLVQVGSAIKPFIYTAAMNKG 461
Cdd:TIGR02074 253 -----------------------DDLQAALVAIDPDTGAVRALVGGRDYGKSQFNRATQAKRQPGSTFKPFVYAAALEKG 309
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 462 LSLSTTISDSPIVIKKKGqkEWRPKNADGVYGGPLRTRVALGKSKNMVAIRILQMAGIDYVADYLQRFGFNrNQYVATES 541
Cdd:TIGR02074 310 LTPATIVNDEPITYNGNG--PWSPKNYGGGYRGNVTLRQALAQSRNIPAVRLLQEVGLDKVVALAKRFGIT-SPLDPVLS 386
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 542 LALGAASFTPLEMARAYAVFNNGGYLIEPYIIDRIIDAQGYELYQANPvvacnscdspvvypepkyfesvkihDEAQvgv 621
Cdd:TIGR02074 387 LALGTVEVSPLEMASAYAVFANGGKYVEPHGIRKIVDRDGKVIYENKP-------------------------KTTQ--- 438
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 622 qtianssnnddddvvedvgdsepelqannseknapslmaesshhvkglryaphVISDELAFLMRSALATAITgepeygwR 701
Cdd:TIGR02074 439 -----------------------------------------------------VISPATAYIMTDMLKGVVE-------S 458
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1721601831 702 GTSYKMlnTIKRADVGGKTGTTNNAKATWYAGFGANISTVVYVGFDDNKRvLGRGASGSSTALPAWTNYMKVALSD 777
Cdd:TIGR02074 459 GTGRSA--RLPGRPVAGKTGTTQNWRDAWFVGYTPYYVTAVWVGYDDKKT-LGKSGTGGGLAAPIWRDFMAEALKN 531
|
|
| PBP_1b |
TIGR02071 |
penicillin-binding protein 1B; Bacterial that synthesize a cell wall of peptidoglycan (murein) ... |
36-800 |
3.37e-114 |
|
penicillin-binding protein 1B; Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273952 [Multi-domain] Cd Length: 730 Bit Score: 364.81 E-value: 3.37e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 36 VATLKNVELQQPMQIFTLDGKLIGEV----GEERRIpVKLDDIPPMLVKAILATEDARFYEHKGIDPKGIMRAIWR--TS 109
Cdd:TIGR02071 114 LSKIENLDNNKEFGFFRLDPKLIAMLyspnGEQRLF-VPRDQFPELLVDTLLATEDRDFYEHDGISLYSIGRAVWVnlTA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 110 QGDTQGASTITQQLAKNFFLTPERSLERKAKEAILALEIEQVLSKNEILELYLNKIYLGYRS----HGVAAAAKTYFNKA 185
Cdd:TIGR02071 193 GRTVQGGSTLTQQLVKNLFLSNERSLWRKANEAYMALILDARYSKDRILELYLNEVYLGQSGddaiHGFPLASQYYFGRP 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 186 LKDLTLSEIAIIAGLPKAPSTMNPLYSVKRAEDRRNVVLGRMLETGDITKEEYEKAKAEPV-------VANYYGATLefr 258
Cdd:TIGR02071 273 LGELSLDQVALLVGMVKGPSYYNPWRNPDRALERRNLVLRLLQEQKIIDDEEYDMLSARPLgvqkkggIISRQPAFL--- 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 259 adyvtEMVRQEIVKRYGENIAYNKGLKVYATVLSADQKAAQDALRENlidydrrhgwrgaeklwtgssawddekiidhls 338
Cdd:TIGR02071 350 -----QLVRRELRQKLGDKVKDLSGLRIFTTLDPVSQSAAEQAVQET--------------------------------- 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 339 klpksepftpavvmqadkskytillangdISVLKRTNAsfapkglkageqiwvrqnknrewalgqIPEVNSALVSINSEN 418
Cdd:TIGR02071 392 -----------------------------IPALKKKKK---------------------------LPDLEAAMVVTDRFT 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 419 GAIESIVGGFSFEQSRFNRATQSLVQVGSAIKPFIYTAAMN--KGLSLSTTISDSPIVIKKKGQKEWRPKNADGVYGGPL 496
Cdd:TIGR02071 416 GEVRAMVGGSDPQFAGFNRALQARRQIGSLVKPAVYLTALSqpDKYRLNTWIEDQPLSIKLSNGQVWSPQNYDRRYSGTV 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 497 RTRVALGKSKNMVAIRILQMAGIDYVADYLQRFGFNRNQYVATESLALGAASFTPLEMARAYAVFNNGGYLIEPYIIDRI 576
Cdd:TIGR02071 496 MLYDALAHSLNIPTVNLGMKVGLPKVSQTWNKLGINKDEIPPVPSMLLGAINLTPYEVAQLYQTIASGGNRAPLSAVRSV 575
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 577 IDAQGYELYQANPVVAcnscdspvvypepkyfesvkihdeaqvgvqtianssnnddddvvedvgdsepelqannseknap 656
Cdd:TIGR02071 576 LDEDGKVLYQSDPQAE---------------------------------------------------------------- 591
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 657 slmaesshhvkglryapHVISDELAFLMRSALATAITgepeygwRGTSYKMLNTIKRADVGGKTGTTNNAKATWYAGFGA 736
Cdd:TIGR02071 592 -----------------QAVPSQAAYLTLYAMQQVVQ-------RGTARSLGADFPSLSLAGKTGTTNDNRDSWFAGIDG 647
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1721601831 737 NISTVVYVGFDDNKRVLGRGASGsstALPAWTNYMKVALSDKPVEKStlPKNIIEVNIDPNSGF 800
Cdd:TIGR02071 648 KEVTIIWLGRDDNGPTKLTGASG---ALQVYARYLSYQTPEPLLLVP--PEGIDWFGVDPQGNG 706
|
|
| Transgly |
pfam00912 |
Transglycosylase; The penicillin-binding proteins are bifunctional proteins consisting of ... |
54-228 |
2.88e-88 |
|
Transglycosylase; The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerization of murein glycan chains.
Pssm-ID: 459993 [Multi-domain] Cd Length: 177 Bit Score: 277.48 E-value: 2.88e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 54 DGKLIGEVGEERRIPVKLDDIPPMLVKAILATEDARFYEHKGIDPKGIMRAIWR--TSQGDTQGASTITQQLAKNFFLTP 131
Cdd:pfam00912 1 DGTLLAELGEENREYVPLDDIPPALKNAVLAIEDRRFYEHGGVDPKGIARALLSnlRSGRIVQGGSTITQQLAKNLFLTP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 132 ERSLERKAKEAILALEIEQVLSKNEILELYLNKIYLGYRSHGVAAAAKTYFNKALKDLTLSEIAIIAGLPKAPSTMNPLY 211
Cdd:pfam00912 81 ERTLTRKLKEAVLALKLERRYSKDEILEAYLNTVYFGRGAYGIEAAARAYFGKDASDLTLAEAALLAGLPQAPSRYNPLR 160
|
170
....*....|....*..
gi 1721601831 212 SVKRAEDRRNVVLGRML 228
Cdd:pfam00912 161 NPERAKRRRNLVLDRMV 177
|
|
| PbpC |
COG4953 |
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope ... |
54-818 |
3.00e-82 |
|
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443980 [Multi-domain] Cd Length: 773 Bit Score: 280.57 E-value: 3.00e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 54 DGKLIGEV---GEERRIPVKLDDIPPMLVKAILATEDARFYEHKGIDPKGIMRAIWRT-SQGD-TQGASTITQQLAKnfF 128
Cdd:COG4953 50 DGTLLRAFlaaDGQWRLPVPLDEVSPRYLQALLAYEDRRFYYHPGVNPLALLRAAWQNlRSGRiVSGGSTLTMQVAR--L 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 129 LTP-ERSLERKAKEAILALEIEQVLSKNEILELYLNKIYLGYRSHGVAAAAKTYFNKALKDLTLSEIAIIAGLPKAPSTM 207
Cdd:COG4953 128 LEPrPRTLSGKLRQILRALQLERRYSKDEILELYLNLAPYGGNIEGVEAASLAYFGKPPSRLSLAEAALLAVLPQAPSRR 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 208 NPLYSVKRAEDRRNVVLGRMLETGDITKEEYEKAKAEPVVANYYgaTLEFRADYVTEMVRQEivkrygeniaYNKGLKVY 287
Cdd:COG4953 208 RPDRNPERARAARDRVLARLAEAGVIDAEEAALALLEPVPARRR--PLPQLAPHLARRLLRQ----------LPGGTRIR 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 288 ATVLSADQKAAQDALREnlidydrrhgwrgaeklwtgssawddekiidhlsklpksepftpavvmqadkskytillangd 367
Cdd:COG4953 276 TTLDAGLQRRLERLVRR--------------------------------------------------------------- 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 368 isvlkrtnasfapkglkageqiWVRQnknrewaLGQIPEVNSALVSINSENGAIESIVG--GFsFEQSRFNR--ATQSLV 443
Cdd:COG4953 293 ----------------------YVRR-------LKQNGIHNAAVLVVDNRTGEVLAYVGsaDF-FDASRQGQvdMVRALR 342
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 444 QVGSAIKPFIYTAAMNKGLSLSTT-ISDSPIVIkkkgqKEWRPKNADGVYGGPLRTRVALGKSKNMVAIRILQMAGIDYV 522
Cdd:COG4953 343 SPGSTLKPFLYGLALDQGLIHPETlLADVPTSF-----GGYRPENFDGTFQGPVSAREALARSLNIPAVRLLEALGPARF 417
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 523 ADYLQRFGFNRNQYVATE---SLALGAASFTPLEMARAYAVFNNGGyliepyiidriidaqgyelyqanpvvacnscdsp 599
Cdd:COG4953 418 YARLRRAGLRLLLPPAEHyglSLILGGAEVTLEELVGLYAALARGG---------------------------------- 463
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 600 vVYPEPKYFESVKIHDEAQvgvqtianssnnddddvvedvgdsepelqannseknapslmaesshhvkglryaphVISDE 679
Cdd:COG4953 464 -EARPLRLLAGEPASPGRR--------------------------------------------------------LLSPG 486
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 680 LAFLMRSALATAITGEPEYGWRGTSYkmlntikRADVGGKTGTTNNAKATWYAGFGANISTVVYVGFDDNKRVlgRGASG 759
Cdd:COG4953 487 AAWLVRDILSDVPRPDGAFGWRALDS-------PPPIAWKTGTSYGFRDAWAVGFTGRYTVGVWVGNPDGTPV--PGLTG 557
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1721601831 760 SSTALPAWTNYMKVALSDKPVEKSTLPKNIIEVNIDPNSGFLGNG-----RKEYFIKGTEPTKR 818
Cdd:COG4953 558 AEAAAPLLFDIFDLLPASRWPLPFPPPAGLLRVEVCAPSGLLAGPncpqrVTEWFIPGTSPPTL 621
|
|
| mrcB |
PRK09506 |
bifunctional glycosyl transferase/transpeptidase; Reviewed |
27-804 |
2.16e-72 |
|
bifunctional glycosyl transferase/transpeptidase; Reviewed
Pssm-ID: 236544 [Multi-domain] Cd Length: 830 Bit Score: 254.31 E-value: 2.16e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 27 MHFKSDlpDVATLKNVELQQPMQIFTLDGKLIGEVGE---ERRIPVKLDDIPPMLVKAILATEDARFYEHKGIDPKGIMR 103
Cdd:PRK09506 171 LTFDGD--RLATIVNLDNNRQFGFFRLDPRLITMLQSpngEQRLFVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGR 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 104 AIWR--TSQGDTQGASTITQQLAKNFFLTPERSLERKAKEAILALEIEQVLSKNEILELYLNKIYLGYRS----HGVAAA 177
Cdd:PRK09506 249 AVLAnlTAGRTVQGGSTLTQQLVKNLFLSNERSLWRKANEAYMALIMDARYSKDRILELYLNEVYLGQSGddqiRGFPLA 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 178 AKTYFNKALKDLTLSEIAIIAGLPKAPSTMNPLYSVKRAEDRRNVVLGRMLETGDITKEEYEKAKAEPVVANYYGATLEF 257
Cdd:PRK09506 329 SLYYFGRPVEELSLDQQALLVGMVKGASLYNPWRNPKLALERRNLVLRLLQQQQIIDQELYDMLSARPLGVQPKGGVISP 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 258 RADYvTEMVRQEIVKRYGENIAYNKGLKVYATVLSADQKAAQDALRENlidydrrhgwrgaeklwtgssawddekiidhl 337
Cdd:PRK09506 409 QPAF-MQMVRQELQAKLGDKVKDLSGVKIFTTLDPVSQDAAEKAVEEG-------------------------------- 455
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 338 sklpksepftpavvmqadkskytillangdISVLKRTnasfapKGLKageqiwvrqnknrewalgqipEVNSALVSINSE 417
Cdd:PRK09506 456 ------------------------------IPALKKQ------RKLS---------------------DLETAMVVVDRF 478
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 418 NGAIESIVGGFSFEQSRFNRATQSLVQVGSAIKPFIYTAAMNK--GLSLSTTISDSPIVIKKKGQKEWRPKNADGVYGGP 495
Cdd:PRK09506 479 SGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQpdKYRLNTWIADAPISLRQPNGQVWSPQNDDRRFSGR 558
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 496 LRTRVALGKSKNMVAIRILQMAGIDYVADYLQRFGFNRNQYVATESLALGAASFTPLEMARAYAVFNNGGYLIEPYIIDR 575
Cdd:PRK09506 559 VMLVDALTRSMNVPTVNLGMALGLPAVTDTWIKLGVPKDQLNPVPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRS 638
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 576 IIDAQGYELYQAnpvvacnscdspvvYPEpkyfesvkihdeaqvgvqtianssnnddddvvedvgdsepelqannsekna 655
Cdd:PRK09506 639 VIAEDGKVLYQS--------------FPQ--------------------------------------------------- 653
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 656 pslmaesshhvkglryAPHVISDELAFLMRSALATAITgepeygwRGTSYKMLNTIKRADVGGKTGTTNNAKATWYAGFG 735
Cdd:PRK09506 654 ----------------AERAVPAQAAYLTLYTMQQVVQ-------RGTGRQLGAKYPNLHLAGKTGTTNDLVDSWFAGID 710
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 736 ANISTVVYVGFDDNKRVLGRGASGsstalpAWTNYMKVALSDKPVE-KSTLPKNIIEVNIDPNSGFLGNG 804
Cdd:PRK09506 711 GKEVTITWVGRDNNQPTKLYGASG------AMTIYQRYLENQTPTPlNLTPPEDIVDMGVDYDGNFVCGS 774
|
|
| PRK14850 |
PRK14850 |
penicillin-binding protein 1b; Provisional |
39-801 |
8.35e-67 |
|
penicillin-binding protein 1b; Provisional
Pssm-ID: 237835 [Multi-domain] Cd Length: 764 Bit Score: 237.44 E-value: 8.35e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 39 LKNVELQQPMQIFTLDGKLIGEVGE---ERRIPVKLDDIPPMLVKAILATEDARFYEHKGIDPKGIMRAIWRT--SQGDT 113
Cdd:PRK14850 127 IKNIDNNHDFSFLRLDPKLIAMLYSpegKKRLFIPRNQYPEMLIKTLLAIEDKYFYEHDGIHLSSIGRAFLVNlmSGHTI 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 114 QGASTITQQLAKNFFLTPERSLERKAKEAILALEIEQVLSKNEILELYLNKIYLGYRSH----GVAAAAKTYFNKALKDL 189
Cdd:PRK14850 207 QGGSTLTQQLVKNLFLTNTRSLWRKINEIYMALILDRFYSKDRILELYLNEVYLGQDGNeqirGFPLASIYYFGRPINEL 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 190 TLSEIAIIAGLPKAPSTMNPLYSVKRAEDRRNVVLGRMLETGDITKEEYEKAKAEPVVANYYGATLEFRADYVtEMVRQE 269
Cdd:PRK14850 287 NLDQYALLVGMVKGASLYNPWTNPNLTLKRRNLVLFLLYKQKVITRKLYKDLCSRPLNVQSKGNIISSHPAFI-QLVCEE 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 270 IVKRYGENIAYNKGLKVYATVLSADQKAAQDALrenlidydrRHGwrgaeklwtgssawddekiidhlsklpksepftpa 349
Cdd:PRK14850 366 FHKKIHYPFKNFSGTKIFTTLDYISQNAAEQAV---------KIG----------------------------------- 401
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 350 vvmqadkskytillangdISVLKRtnaSFAPKGLKAgeqiwvrqnknrewalgqipevnsALVSINSENGAIESIVGGFS 429
Cdd:PRK14850 402 ------------------IPILKR---KKRLKDLEV------------------------AMVIIDRFSGEVRALIGSSK 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 430 FEQSRFNRATQSLVQVGSAIKPFIYTAAMNK--GLSLSTTISDSPIVIKKKGQKEWRPKNADGVYGGPLRTRVALGKSKN 507
Cdd:PRK14850 437 PEFNGYNRALKARRSIGSLSKPITYLTALSQpeKYHLNTWISDTPISIKLDNGQYWTPKNNNFSFSGKVMLIDALIHSIN 516
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 508 MVAIRILQMAGIDYVADYLQRFGFNRNQYVATESLALGAASFTPLEMARAYAVFNNGGYLIEPYIIDRIIDAQGYELYQa 587
Cdd:PRK14850 517 IPTVHLSINLGLKKLVDSWILLGISSNYITPLPSISLGAINLTPMEVAQVFQIIGSGGYKSSLSSIRSIISDDNKVLYQ- 595
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 588 npvvacnscdspvvypepkYFESVKihdeaqvgvqtianssnnddddvvedvgdsepelqannseknapslmaesshhvk 667
Cdd:PRK14850 596 -------------------NFPQSK------------------------------------------------------- 601
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 668 glryapHVISDELAFLMRSALATAITgepeygwRGTSYKMLNTIKRADVGGKTGTTNNAKATWYAGFGANISTVVYVGFD 747
Cdd:PRK14850 602 ------HVESSQASYLTLYAMQQVVK-------SGTAKSLGTIFKEFSLAGKTGTTNNLVDSWFVGIDGKQVVITWIGRD 668
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 1721601831 748 DNKRVLGRGASGsstALPAWTNYMKValsDKPVE-KSTLPKNIIEVNIDPNSGFL 801
Cdd:PRK14850 669 NNHTTKLYGSSG---AMKIYKRYLQY---QNPVPlVLKAPNNINMFYINNLGELF 717
|
|
| PRK13481 |
PRK13481 |
glycosyltransferase; Provisional |
63-244 |
6.68e-36 |
|
glycosyltransferase; Provisional
Pssm-ID: 184078 [Multi-domain] Cd Length: 232 Bit Score: 135.70 E-value: 6.68e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 63 EERRIPVKLDDIPPMLVKAILATEDARFYEHKGIDPKGIMRAIWRT-SQGDTQGASTITQQLAKNFFLTPERSLERKAKE 141
Cdd:PRK13481 42 ENKSSFVSADNMPEYVKGAFISMEDERFYKHHGFDLKGTTRALFSTiSDRDVQGGSTITQQVVKNYFYDNERSFTRKVKE 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 142 AILALEIEQVLSKNEILELYLNKIYLGYRSHGVAAAAKTYF-------NKALKDLTLSEIAIIAGLPKAPSTMNPLYSVK 214
Cdd:PRK13481 122 LFVAHRVEKQYSKNEILSFYLNNIYFGDNQYTLEGAANHYFgttvnknSTTMSHITVLQSAILASKVNAPSVYNINDMSE 201
|
170 180 190
....*....|....*....|....*....|
gi 1721601831 215 RAEDRRNVVLGRMLETGDITKEEYEKAKAE 244
Cdd:PRK13481 202 NFTQRVSTNLEKMKQQNYINETQYQQAMSQ 231
|
|
| mono_pep_trsgly |
TIGR02070 |
monofunctional biosynthetic peptidoglycan transglycosylase; This family is one of the ... |
69-215 |
4.75e-32 |
|
monofunctional biosynthetic peptidoglycan transglycosylase; This family is one of the transglycosylases involved in the late stages of peptidoglycan biosynthesis. Members tend to be small, about 240 amino acids in length, and consist almost entirely of a domain described by pfam00912 for transglycosylases. Species with this protein will have several other transglycosylases as well. All species with this protein are Proteobacteria that produce murein (peptidoglycan). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273951 [Multi-domain] Cd Length: 224 Bit Score: 124.50 E-value: 4.75e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 69 VKLDDIPPMLVKAILATEDARFYEHKGIDPKGIMRAIWRTSQGD--TQGASTITQQLAKNFFLTPERSLERKAKEAILAL 146
Cdd:TIGR02070 58 RPYDQISPNLKRAVIASEDAKFVEHHGFDWEAIQDALEKNEKSGkvVRGGSTISQQLAKNLFLWSGRSYLRKGLEAWATW 137
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1721601831 147 EIEQVLSKNEILELYLNKIYLGYRSHGVAAAAKTYFNKALKDLTLSEIAIIAG-LPkapstmNPL-YSVKR 215
Cdd:TIGR02070 138 MLETWWSKQRILEVYLNSVEWGNGVFGAEAAARYYFKRSASNLTRGQAARLAAvLP------NPKyYDENR 202
|
|
| PRK11240 |
PRK11240 |
penicillin-binding protein 1C; Provisional |
66-565 |
1.40e-31 |
|
penicillin-binding protein 1C; Provisional
Pssm-ID: 183049 [Multi-domain] Cd Length: 772 Bit Score: 132.52 E-value: 1.40e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 66 RIPVKLDDIPPMLVKAILATEDARFYEHKGIDPKGIMRAIWR--TSQGDTQGASTITQQLAKnfFLTPE-RSLERKAKEA 142
Cdd:PRK11240 62 RYPVTIEDVSPRYLEALINYEDRWFWKHPGVNPFSVARAAWQdlTSGRVISGGSTLTMQVAR--LLDPHpRTFGGKIRQL 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 143 ILALEIEQVLSKNEILELYLNKIYLGYRSHGVAAAAKTYFNKALKDLTLSEIAIIAGLPKAPSTMNPLYSVKRAEDRRNV 222
Cdd:PRK11240 140 WRALQLEWHLSKREILTLYLNRAPFGGTLQGIGAASWAYLGKSPANLSYAEAALLAVLPQAPSRLRPDRWPERAEAARNK 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 223 VLGRMLETGditkeeyekakaepvvanyygatlefradyvtemvrqeivkrygeniaynkglkvyatVLSADQkaAQDAL 302
Cdd:PRK11240 220 VLERMAEQG----------------------------------------------------------VWSAEQ--VKESR 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 303 RENlidydrrhgwrgaekLWTGssawddekiidhlsklPKSEP-FTPAVVMQadkskytilLANGDISVLKRTNasfapk 381
Cdd:PRK11240 240 EEP---------------VWLA----------------PRQMPqLAPLFARM---------MLGKSKSDKIVTT------ 273
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 382 gLKAGEQiwvRQNKnrEWALG---QIPEVNS-ALVSINSENGAIESIVGGFSF-EQSRFNRA--TQSLVQVGSAIKPFIY 454
Cdd:PRK11240 274 -LDAGLQ---RRLE--DLALNwkgRLPPRSSlAMIVVDHTDMAVRGWVGSVDLnDDSRFGHVdmVNAIRSPGSVLKPFVY 347
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 455 TAAMNKGL----SLsttISDSPiviKKKGqkEWRPKNADGVYGGPLRTRVALGKSKNMVAIRILQMAGIDYVADYLQRFG 530
Cdd:PRK11240 348 GLALDDGLihpaSL---LQDVP---RRTG--DYRPGNFDSGFHGPVSMSEALVRSLNLPAVQVLEAYGPKRFAAKLRNVG 419
|
490 500 510
....*....|....*....|....*....|....*...
gi 1721601831 531 FNRNQYVATE---SLALGAASFTPLEMARAYAVFNNGG 565
Cdd:PRK11240 420 LPLYLPAGAEpnlSLILGGAGARLEDMVAAYSAFARHG 457
|
|
| Transpeptidase |
pfam00905 |
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ... |
410-590 |
4.50e-21 |
|
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain] Cd Length: 296 Bit Score: 94.41 E-value: 4.50e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 410 ALVSINSENGAIESIVGGFSFEQSRF-----NRATQSLVQVGSAIKPFIYTAAMNKG-LSLSTTISDSPIviKKKGQKEW 483
Cdd:pfam00905 2 SAVVLDPKTGEVLAMVGKPSYDPNGFigplrNRAVTSRYEPGSTFKPFTALAALDNGvLKPDETIFDWPG--KQQGGKSI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 484 RPKNADGVYGGPLRTrvALGKSKNMVAIRILQMAGIDYVADYLQRFGFN----------RNQYVATESLALGAASF---- 549
Cdd:pfam00905 80 GDWNQDQVGIGTLRQ--ALEYSSNWYMQKLAQKLGADKLRSYLKKFGYGnktgiglpgeNAGYLTPYWLEGATASFgigl 157
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1721601831 550 --TPLEMARAYAVFNNGGYLIEPYIIDRIIDAQGYELYQANPV 590
Cdd:pfam00905 158 tiTPLQQAQAYAAIANGGKLVPPHLVKSIEDKVDPKVLNKLPI 200
|
|
| FtsI |
COG0768 |
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ... |
410-591 |
5.81e-20 |
|
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain] Cd Length: 568 Bit Score: 94.51 E-value: 5.81e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 410 ALVSINSENGAIESIVGGFSF---------EQSRFNRATQSLVQVGSAIKPFIYTAAMNKGL-SLSTTISDSPiVIKKKG 479
Cdd:COG0768 250 AVVVMDPKTGEILAMASYPSFdpnlfvggpDEPLRNRAVQGTYEPGSTFKPFTAAAALEEGViTPDTTFDCPG-YYRVGG 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 480 qkeWRPKNADGVYGGPLRTRVALGKSKNMVAIRILQMAGIDYVADYLQRFGF-----------------NRNQYVATE-- 540
Cdd:COG0768 329 ---RTIRDWDRGGHGTLTLTEALAKSSNVGFYKLALRLGIDKLYDYLKKFGLgqktgidlpgeasgllpSPKRWYPGEta 405
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1721601831 541 SLALG-AASFTPLEMARAYAVFNNGGYLIEPYIIDRIIDAQGYELYQANPVV 591
Cdd:COG0768 406 TMSIGqGLSVTPLQLAQAYAAIANGGVLVKPHLVKEIVDPDGEVVKEEPEVL 457
|
|
| PCB_OB |
pfam17092 |
Penicillin-binding protein OB-like domain; |
315-407 |
8.61e-19 |
|
Penicillin-binding protein OB-like domain;
Pssm-ID: 465343 [Multi-domain] Cd Length: 111 Bit Score: 82.68 E-value: 8.61e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 315 WRGAEK-LW-TGSSAWDDEKIIDHLSKLPKSEPFTPAVVMQADKSKYTILLANGDISVLKRTNASFA------------P 380
Cdd:pfam17092 1 YRGPEAhLDlPADWAERLAAIDEALADLPDVGGLRPAVVLSVSPKSARVGLRDGETGTIPGEGLRWArpylsdkrqgpaP 80
|
90 100 110
....*....|....*....|....*....|.
gi 1721601831 381 KG----LKAGEQIWVRQNKNREWALGQIPEV 407
Cdd:pfam17092 81 KSasdvLKPGDVIRVRPNGDGGWRLRQVPEV 111
|
|
| pbp2_mrdA |
TIGR03423 |
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ... |
410-612 |
1.68e-10 |
|
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain] Cd Length: 592 Bit Score: 64.47 E-value: 1.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 410 ALVSINSENGAIESIV-----------GGFSFEQSR----------FNRATQSLVQVGSAIKPFIYTAAMNKGL-SLSTT 467
Cdd:TIGR03423 250 AVVVMDPRTGEILAMVstpsfdpnlfvDGISSKDYKallndpdrplLNRAIQGVYPPGSTFKPVVALAALEEGViTPETR 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 468 ISDSP-IVIKKKGQKEWRPknadgvYG-GPLRTRVALGKSKN----MVAIRIlqmaGIDYVADYLQRFGF---------- 531
Cdd:TIGR03423 330 IYCPGyFQLGGRRFRCWKR------GGhGRVDLRKAIEESCDvyfyQLALRL----GIDKIAEYAKRFGFgqktgidlpg 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1721601831 532 --------------NRNQ-YVATESLAL----GAASFTPLEMARAYAVFNNGGYLIEPYIIDRIIDAQGYELYQANPVVA 592
Cdd:TIGR03423 400 eksglvpsrewkrkRFGQpWYPGDTLNVsigqGYVLVTPLQLAVATAALANGGKLYKPHLVKSIEDPDGGVVRRTEPEVL 479
|
250 260
....*....|....*....|
gi 1721601831 593 cnscdsPVVYPEPKYFESVK 612
Cdd:TIGR03423 480 ------RPLPISPENLDVVR 493
|
|
| |
