NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1722482552|gb|QED39647|]
View 

melanocortin 2 receptor accessory protein 2 [Epinephelus coioides]

Protein Classification

MRAP domain-containing protein( domain architecture ID 10633540)

MRAP domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
MRAP pfam15183
Melanocortin-2 receptor accessory protein family; This family is thought to be involved in ...
 9-94 4.53e-44

Melanocortin-2 receptor accessory protein family; This family is thought to be involved in cell trafficking. It is required for MC2R expression in certain cell types, suggesting that it is involved in the processing, trafficking or function of MC2R. MRAP may be involved in the intracellular trafficking pathways in adipocyte cells. This family of proteins is found in eukaryotes. Proteins in this family are typically between 47 and 205 amino acids in length.


:

Pssm-ID: 464550  Cd Length: 89  Bit Score: 143.07  E-value: 4.53e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1722482552   9 QTSARRSDYV-WQYEY---YDDEEPVSFEGLKAHRYSIVIGFWVGLAVFVIFMFFVLTLLTKTGAPHQENpdsAEKRHRP 84
Cdd:pfam15183   1 MANATNASYPyYSYEYyldYLDLIPVDEKKLKAHKYSIVIGFWVSLAVFVVLLFFVLLYMSWSGSPQQRN---SEKHHRT 77

                          90
                  ....*....|
gi 1722482552  85 GSCLVDIGSP 94
Cdd:pfam15183  78 CSWSHDLGLP 87
 
Name Accession Description Interval E-value
MRAP pfam15183
Melanocortin-2 receptor accessory protein family; This family is thought to be involved in ...
 9-94 4.53e-44

Melanocortin-2 receptor accessory protein family; This family is thought to be involved in cell trafficking. It is required for MC2R expression in certain cell types, suggesting that it is involved in the processing, trafficking or function of MC2R. MRAP may be involved in the intracellular trafficking pathways in adipocyte cells. This family of proteins is found in eukaryotes. Proteins in this family are typically between 47 and 205 amino acids in length.


Pssm-ID: 464550  Cd Length: 89  Bit Score: 143.07  E-value: 4.53e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1722482552   9 QTSARRSDYV-WQYEY---YDDEEPVSFEGLKAHRYSIVIGFWVGLAVFVIFMFFVLTLLTKTGAPHQENpdsAEKRHRP 84
Cdd:pfam15183   1 MANATNASYPyYSYEYyldYLDLIPVDEKKLKAHKYSIVIGFWVSLAVFVVLLFFVLLYMSWSGSPQQRN---SEKHHRT 77

                          90
                  ....*....|
gi 1722482552  85 GSCLVDIGSP 94
Cdd:pfam15183  78 CSWSHDLGLP 87
 
Name Accession Description Interval E-value
MRAP pfam15183
Melanocortin-2 receptor accessory protein family; This family is thought to be involved in ...
 9-94 4.53e-44

Melanocortin-2 receptor accessory protein family; This family is thought to be involved in cell trafficking. It is required for MC2R expression in certain cell types, suggesting that it is involved in the processing, trafficking or function of MC2R. MRAP may be involved in the intracellular trafficking pathways in adipocyte cells. This family of proteins is found in eukaryotes. Proteins in this family are typically between 47 and 205 amino acids in length.


Pssm-ID: 464550  Cd Length: 89  Bit Score: 143.07  E-value: 4.53e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1722482552   9 QTSARRSDYV-WQYEY---YDDEEPVSFEGLKAHRYSIVIGFWVGLAVFVIFMFFVLTLLTKTGAPHQENpdsAEKRHRP 84
Cdd:pfam15183   1 MANATNASYPyYSYEYyldYLDLIPVDEKKLKAHKYSIVIGFWVSLAVFVVLLFFVLLYMSWSGSPQQRN---SEKHHRT 77

                          90
                  ....*....|
gi 1722482552  85 GSCLVDIGSP 94
Cdd:pfam15183  78 CSWSHDLGLP 87
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH