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Conserved domains on  [gi|1799510656|gb|QHM33633|]
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Ferredoxin--NADP reductase 2 [Lactiplantibacillus plantarum]

Protein Classification

NAD(P)/FAD-dependent oxidoreductase( domain architecture ID 11422994)

NAD(P)/FAD-dependent oxidoreductase catalyzes the transfer of electrons from one molecule, the electron donor or reductant, to another molecule, the electron acceptor or oxidant

CATH:  3.50.50.60
EC:  1.-.-.-
Gene Ontology:  GO:0050660|GO:0016491
PubMed:  33684359

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
5-309 5.40e-82

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


:

Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 250.81  E-value: 5.40e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   5 YDLTIIGGGPVGMFAAFYAGMRNARVQLLESlPELGGQVQALypeKIIHDVAGYPA-IKGRELVAQLEKQLTQFPIDIQL 83
Cdd:COG0492     1 YDVVIIGAGPAGLTAAIYAARAGLKTLVIEG-GEPGGQLATT---KEIENYPGFPEgISGPELAERLREQAERFGAEILL 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  84 ASpVTDVTGAMGDFTITTASGQQSHSKAIIVATGSGafePRRLAVDNAAEFENKQLFYHIPS-VKQFADRTVLVAGGGDS 162
Cdd:COG0492    77 EE-VTSVDKDDGPFRVTTDDGTEYEAKAVIIATGAG---PRKLGLPGEEEFEGRGVSYCATCdGFFFRGKDVVVVGGGDS 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 163 AIDMALMLEPVAKHVYIMHRRDRFRGMEHNVDLLKASS-VEIKTPFLIKQLaeTATGQLQ-LTMKEVRGTTEETLAVDDL 240
Cdd:COG0492   153 ALEEALYLTKFASKVTLIHRRDELRASKILVERLRANPkIEVLWNTEVTEI--EGDGRVEgVTLKNVKTGEEKELEVDGV 230

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1799510656 241 IVNYGFIADNKVIRNWHVTpTMAHRLITVDTEMNTDVPGIAAIGDTVTYagKLGLIASGFGEAPNAVNQ 309
Cdd:COG0492   231 FVAIGLKPNTELLKGLGLE-LDEDGYIVVDEDMETSVPGVFAAGDVRDY--KYRQAATAAGEGAIAALS 296
 
Name Accession Description Interval E-value
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
5-309 5.40e-82

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 250.81  E-value: 5.40e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   5 YDLTIIGGGPVGMFAAFYAGMRNARVQLLESlPELGGQVQALypeKIIHDVAGYPA-IKGRELVAQLEKQLTQFPIDIQL 83
Cdd:COG0492     1 YDVVIIGAGPAGLTAAIYAARAGLKTLVIEG-GEPGGQLATT---KEIENYPGFPEgISGPELAERLREQAERFGAEILL 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  84 ASpVTDVTGAMGDFTITTASGQQSHSKAIIVATGSGafePRRLAVDNAAEFENKQLFYHIPS-VKQFADRTVLVAGGGDS 162
Cdd:COG0492    77 EE-VTSVDKDDGPFRVTTDDGTEYEAKAVIIATGAG---PRKLGLPGEEEFEGRGVSYCATCdGFFFRGKDVVVVGGGDS 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 163 AIDMALMLEPVAKHVYIMHRRDRFRGMEHNVDLLKASS-VEIKTPFLIKQLaeTATGQLQ-LTMKEVRGTTEETLAVDDL 240
Cdd:COG0492   153 ALEEALYLTKFASKVTLIHRRDELRASKILVERLRANPkIEVLWNTEVTEI--EGDGRVEgVTLKNVKTGEEKELEVDGV 230

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1799510656 241 IVNYGFIADNKVIRNWHVTpTMAHRLITVDTEMNTDVPGIAAIGDTVTYagKLGLIASGFGEAPNAVNQ 309
Cdd:COG0492   231 FVAIGLKPNTELLKGLGLE-LDEDGYIVVDEDMETSVPGVFAAGDVRDY--KYRQAATAAGEGAIAALS 296
TRX_reduct TIGR01292
thioredoxin-disulfide reductase; This model describes thioredoxin-disulfide reductase, a ...
 6-285 4.25e-32

thioredoxin-disulfide reductase; This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport]


Pssm-ID: 273540 [Multi-domain]  Cd Length: 299  Bit Score: 121.19  E-value: 4.25e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   6 DLTIIGGGPVGMFAAFYAGMRNARVQLLESlPELGGQvqaLYPEKIIHDVAGYP-AIKGRELVAQLEKQLTQFPIDIQLA 84
Cdd:TIGR01292   1 DVIIIGAGPAGLTAAIYAARANLKPLLIEG-MEPGGQ---LTTTTEVENYPGFPeGISGPELMEKMKEQAVKFGAEIIYE 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  85 SpVTDVTGAMGDFTITTASGQQSHSKAIIVATGSgafEPRRLAVDNAAEFENKQLFY------HIpsvkqFADRTVLVAG 158
Cdd:TIGR01292  77 E-VIKVDKSDRPFKVYTGDGKEYTAKAVIIATGA---SARKLGIPGEDEFWGRGVSYcatcdgPF-----FKNKEVAVVG 147

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 159 GGDSAIDMALMLEPVAKHVYIMHRRDRFRGMEHNVD-LLKASSVEIKTPFLIKQLA--ETATGqlqLTMKEVRGTTEETL 235
Cdd:TIGR01292 148 GGDSAIEEALYLTRIAKKVTLVHRRDKFRAEKILLDrLKKNPKIEFLWNSTVEEIVgdNKVEG---VKIKNTVTGEEEEL 224

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1799510656 236 AVDDLIVNYGFIADNKVIRNWHVTPTMAHrlITVDTEMNTDVPGIAAIGD 285
Cdd:TIGR01292 225 EVDGVFIAIGHEPNTELLKGLLELDENGY--IVTDEGMRTSVPGVFAAGD 272
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 5-309 4.34e-24

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 99.70  E-value: 4.34e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   5 YDLTIIGGGPVGMFAAFYAGMRNARVQLLESLPELGGqVQALYPEKIIHDV-AGYPAIKGRELVAQLEKQLTQFPIDIQ- 82
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIEDEGTCPY-GGCVLSKALLGAAeAPEIASLWADLYKRKEEVVKKLNNGIEv 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  83 -LASPVTDVTGAMGDFTIT---TASGQQSHSKAIIVATGSgafEPRRLAVDNAAEFENKQLFYhIPSVKQFA----DRTV 154
Cdd:pfam07992  80 lLGTEVVSIDPGAKKVVLEelvDGDGETITYDRLVIATGA---RPRLPPIPGVELNVGFLVRT-LDSAEALRlkllPKRV 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 155 LVAGGGDSAIDMALMLEPVAKHVYIMHRRDRF-RGMEHNV-----DLLKASSVEIKTPFLIKQLAETATGQlqltmkEVR 228
Cdd:pfam07992 156 VVVGGGYIGVELAAALAKLGKEVTLIEALDRLlRAFDEEIsaaleKALEKNGVEVRLGTSVKEIIGDGDGV------EVI 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 229 GTTEETLAVDDLIVNYGFIADNKVIRNWHVtPTMAHRLITVDTEMNTDVPGIAAIGDtvtyagklgLIASGFGEAPNAVN 308
Cdd:pfam07992 230 LKDGTEIDADLVVVAIGRRPNTELLEAAGL-ELDERGGIVVDEYLRTSVPGIYAAGD---------CRVGGPELAQNAVA 299


                  .
gi 1799510656 309 Q 309
Cdd:pfam07992 300 Q 300
PRK15317 PRK15317
alkyl hydroperoxide reductase subunit F; Provisional
 5-301 7.22e-17

alkyl hydroperoxide reductase subunit F; Provisional


Pssm-ID: 237942 [Multi-domain]  Cd Length: 517  Bit Score: 80.97  E-value: 7.22e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   5 YDLTIIGGGPVGMFAAFYAGMRNARVQLLESlpELGGQVQ-ALYPEKIIhdvaGYPAIKGRELVAQLEKQLTQFPIDIQL 83
Cdd:PRK15317  212 YDVLVVGGGPAGAAAAIYAARKGIRTGIVAE--RFGGQVLdTMGIENFI----SVPETEGPKLAAALEEHVKEYDVDIMN 285

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  84 ASPVTDVTGAMGDFTITTASGQQSHSKAIIVATGSgafEPRRLAVDNAAEFENKQLFY--HI--PsvkQFADRTVLVAGG 159
Cdd:PRK15317  286 LQRASKLEPAAGLIEVELANGAVLKAKTVILATGA---RWRNMNVPGEDEYRNKGVAYcpHCdgP---LFKGKRVAVIGG 359

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 160 GDSAIDMALMLEPVAKHVYIMHRRDRFRGMEHNVDLLKA-SSVEIKTPFLIKQLaeTATGQ--LQLTMKEvRGTTEE-TL 235
Cdd:PRK15317  360 GNSGVEAAIDLAGIVKHVTVLEFAPELKADQVLQDKLRSlPNVTIITNAQTTEV--TGDGDkvTGLTYKD-RTTGEEhHL 436

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1799510656 236 AVDDLIVNYGFIA-----DNKVIRNwhvtptmAHRLITVDTEMNTDVPGIAAIGDTVTYAGKLGLIASGFG 301
Cdd:PRK15317  437 ELEGVFVQIGLVPntewlKGTVELN-------RRGEIIVDARGATSVPGVFAAGDCTTVPYKQIIIAMGEG 500
 
Name Accession Description Interval E-value
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
5-309 5.40e-82

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 250.81  E-value: 5.40e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   5 YDLTIIGGGPVGMFAAFYAGMRNARVQLLESlPELGGQVQALypeKIIHDVAGYPA-IKGRELVAQLEKQLTQFPIDIQL 83
Cdd:COG0492     1 YDVVIIGAGPAGLTAAIYAARAGLKTLVIEG-GEPGGQLATT---KEIENYPGFPEgISGPELAERLREQAERFGAEILL 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  84 ASpVTDVTGAMGDFTITTASGQQSHSKAIIVATGSGafePRRLAVDNAAEFENKQLFYHIPS-VKQFADRTVLVAGGGDS 162
Cdd:COG0492    77 EE-VTSVDKDDGPFRVTTDDGTEYEAKAVIIATGAG---PRKLGLPGEEEFEGRGVSYCATCdGFFFRGKDVVVVGGGDS 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 163 AIDMALMLEPVAKHVYIMHRRDRFRGMEHNVDLLKASS-VEIKTPFLIKQLaeTATGQLQ-LTMKEVRGTTEETLAVDDL 240
Cdd:COG0492   153 ALEEALYLTKFASKVTLIHRRDELRASKILVERLRANPkIEVLWNTEVTEI--EGDGRVEgVTLKNVKTGEEKELEVDGV 230

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1799510656 241 IVNYGFIADNKVIRNWHVTpTMAHRLITVDTEMNTDVPGIAAIGDTVTYagKLGLIASGFGEAPNAVNQ 309
Cdd:COG0492   231 FVAIGLKPNTELLKGLGLE-LDEDGYIVVDEDMETSVPGVFAAGDVRDY--KYRQAATAAGEGAIAALS 296
TRX_reduct TIGR01292
thioredoxin-disulfide reductase; This model describes thioredoxin-disulfide reductase, a ...
 6-285 4.25e-32

thioredoxin-disulfide reductase; This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport]


Pssm-ID: 273540 [Multi-domain]  Cd Length: 299  Bit Score: 121.19  E-value: 4.25e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   6 DLTIIGGGPVGMFAAFYAGMRNARVQLLESlPELGGQvqaLYPEKIIHDVAGYP-AIKGRELVAQLEKQLTQFPIDIQLA 84
Cdd:TIGR01292   1 DVIIIGAGPAGLTAAIYAARANLKPLLIEG-MEPGGQ---LTTTTEVENYPGFPeGISGPELMEKMKEQAVKFGAEIIYE 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  85 SpVTDVTGAMGDFTITTASGQQSHSKAIIVATGSgafEPRRLAVDNAAEFENKQLFY------HIpsvkqFADRTVLVAG 158
Cdd:TIGR01292  77 E-VIKVDKSDRPFKVYTGDGKEYTAKAVIIATGA---SARKLGIPGEDEFWGRGVSYcatcdgPF-----FKNKEVAVVG 147

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 159 GGDSAIDMALMLEPVAKHVYIMHRRDRFRGMEHNVD-LLKASSVEIKTPFLIKQLA--ETATGqlqLTMKEVRGTTEETL 235
Cdd:TIGR01292 148 GGDSAIEEALYLTRIAKKVTLVHRRDKFRAEKILLDrLKKNPKIEFLWNSTVEEIVgdNKVEG---VKIKNTVTGEEEEL 224

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1799510656 236 AVDDLIVNYGFIADNKVIRNWHVTPTMAHrlITVDTEMNTDVPGIAAIGD 285
Cdd:TIGR01292 225 EVDGVFIAIGHEPNTELLKGLLELDENGY--IVTDEGMRTSVPGVFAAGD 272
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 5-309 4.34e-24

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 99.70  E-value: 4.34e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   5 YDLTIIGGGPVGMFAAFYAGMRNARVQLLESLPELGGqVQALYPEKIIHDV-AGYPAIKGRELVAQLEKQLTQFPIDIQ- 82
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIEDEGTCPY-GGCVLSKALLGAAeAPEIASLWADLYKRKEEVVKKLNNGIEv 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  83 -LASPVTDVTGAMGDFTIT---TASGQQSHSKAIIVATGSgafEPRRLAVDNAAEFENKQLFYhIPSVKQFA----DRTV 154
Cdd:pfam07992  80 lLGTEVVSIDPGAKKVVLEelvDGDGETITYDRLVIATGA---RPRLPPIPGVELNVGFLVRT-LDSAEALRlkllPKRV 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 155 LVAGGGDSAIDMALMLEPVAKHVYIMHRRDRF-RGMEHNV-----DLLKASSVEIKTPFLIKQLAETATGQlqltmkEVR 228
Cdd:pfam07992 156 VVVGGGYIGVELAAALAKLGKEVTLIEALDRLlRAFDEEIsaaleKALEKNGVEVRLGTSVKEIIGDGDGV------EVI 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 229 GTTEETLAVDDLIVNYGFIADNKVIRNWHVtPTMAHRLITVDTEMNTDVPGIAAIGDtvtyagklgLIASGFGEAPNAVN 308
Cdd:pfam07992 230 LKDGTEIDADLVVVAIGRRPNTELLEAAGL-ELDERGGIVVDEYLRTSVPGIYAAGD---------CRVGGPELAQNAVA 299


                  .
gi 1799510656 309 Q 309
Cdd:pfam07992 300 Q 300
PRK15317 PRK15317
alkyl hydroperoxide reductase subunit F; Provisional
 5-301 7.22e-17

alkyl hydroperoxide reductase subunit F; Provisional


Pssm-ID: 237942 [Multi-domain]  Cd Length: 517  Bit Score: 80.97  E-value: 7.22e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   5 YDLTIIGGGPVGMFAAFYAGMRNARVQLLESlpELGGQVQ-ALYPEKIIhdvaGYPAIKGRELVAQLEKQLTQFPIDIQL 83
Cdd:PRK15317  212 YDVLVVGGGPAGAAAAIYAARKGIRTGIVAE--RFGGQVLdTMGIENFI----SVPETEGPKLAAALEEHVKEYDVDIMN 285

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  84 ASPVTDVTGAMGDFTITTASGQQSHSKAIIVATGSgafEPRRLAVDNAAEFENKQLFY--HI--PsvkQFADRTVLVAGG 159
Cdd:PRK15317  286 LQRASKLEPAAGLIEVELANGAVLKAKTVILATGA---RWRNMNVPGEDEYRNKGVAYcpHCdgP---LFKGKRVAVIGG 359

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 160 GDSAIDMALMLEPVAKHVYIMHRRDRFRGMEHNVDLLKA-SSVEIKTPFLIKQLaeTATGQ--LQLTMKEvRGTTEE-TL 235
Cdd:PRK15317  360 GNSGVEAAIDLAGIVKHVTVLEFAPELKADQVLQDKLRSlPNVTIITNAQTTEV--TGDGDkvTGLTYKD-RTTGEEhHL 436

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1799510656 236 AVDDLIVNYGFIA-----DNKVIRNwhvtptmAHRLITVDTEMNTDVPGIAAIGDTVTYAGKLGLIASGFG 301
Cdd:PRK15317  437 ELEGVFVQIGLVPntewlKGTVELN-------RRGEIIVDARGATSVPGVFAAGDCTTVPYKQIIIAMGEG 500
PRK10262 PRK10262
thioredoxin reductase; Provisional
 7-301 1.25e-12

thioredoxin reductase; Provisional


Pssm-ID: 182343 [Multi-domain]  Cd Length: 321  Bit Score: 67.39  E-value: 1.25e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   7 LTIIGGGPVGMFAAFYAGMRNARVQLLESLpELGGQVQAlypekiIHDVAGYPA----IKGRELVAQLEKQLTQFPIDIq 82
Cdd:PRK10262    9 LLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTT------TTEVENWPGdpndLTGPLLMERMHEHATKFETEI- 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  83 LASPVTDVTGAMGDFTITTASGQQShSKAIIVATGSGAfepRRLAVDNAAEFENKQL---------FYHipsvkqfaDRT 153
Cdd:PRK10262   81 IFDHINKVDLQNRPFRLTGDSGEYT-CDALIIATGASA---RYLGLPSEEAFKGRGVsacatcdgfFYR--------NQK 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 154 VLVAGGGDSAIDMALMLEPVAKHVYIMHRRDRFRG----MEHNVDLLKASSVEIKTPFLIKQLAETATGQLQLTMKEVRG 229
Cdd:PRK10262  149 VAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAekilIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQN 228

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1799510656 230 TTE-ETLAVDDLIVNYGFIADNKVIRNwhvTPTMAHRLITVDTEMN-----TDVPGIAAIGDTVTYAGKLGLIASGFG 301
Cdd:PRK10262  229 SDNiESLDVAGLFVAIGHSPNTAIFEG---QLELENGYIKVQSGIHgnatqTSIPGVFAAGDVMDHIYRQAITSAGTG 303
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
 9-288 7.01e-12

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 65.97  E-value: 7.01e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   9 IIGGGPVGMFAAFYAGMRNARVQLLESLPELGGqvqaL--YpekiihdvaGYPAIK-GRELVAQLEKQLTQFPIDIQlas 85
Cdd:PRK11749  145 VIGAGPAGLTAAHRLARKGYDVTIFEARDKAGG----LlrY---------GIPEFRlPKDIVDREVERLLKLGVEIR--- 208

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  86 pvtdvTGAMGDFTITTASGQQSHsKAIIVATGSGAfePRRLA--------VDNAAEFenkqlfyhIPSVKQFAD------ 151
Cdd:PRK11749  209 -----TNTEVGRDITLDELRAGY-DAVFIGTGAGL--PRFLGipgenlggVYSAVDF--------LTRVNQAVAdydlpv 272

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 152 -RTVLVAGGGDSAIDMA---LMLEpvAKHVYIMHRRDR--FRGMEHNVDLLKASSVEI---KTPFLIKQ---------LA 213
Cdd:PRK11749  273 gKRVVVIGGGNTAMDAArtaKRLG--AESVTIVYRRGReeMPASEEEVEHAKEEGVEFewlAAPVEILGdegrvtgveFV 350

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 214 ETATGQ--LQLTMKEVRGTTEETLAVDDLIVNYGFIADNKVIRNwhvTP----TMAHRLITVDTEMNTDVPGIAAIGDTV 287
Cdd:PRK11749  351 RMELGEpdASGRRRVPIEGSEFTLPADLVIKAIGQTPNPLILST---TPglelNRWGTIIADDETGRTSLPGVFAGGDIV 427


                  .
gi 1799510656 288 T 288
Cdd:PRK11749  428 T 428
Pyr_redox_3 pfam13738
Pyridine nucleotide-disulphide oxidoreductase;
59-284 7.42e-12

Pyridine nucleotide-disulphide oxidoreductase;


Pssm-ID: 404603 [Multi-domain]  Cd Length: 296  Bit Score: 64.94  E-value: 7.42e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  59 PAIKGRELVAQLEKQLTQFPIDIQLASPVTDVTGAMGDFTITTaSGQQSHSKAIIVATGSGAFePRRLAVDnaaefENKQ 138
Cdd:pfam13738  70 EHPSGNEYAEYLRRVADHFELPINLFEEVTSVKKEDDGFVVTT-SKGTYQARYVIIATGEFDF-PNKLGVP-----ELPK 142

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 139 LFYHIPSVKQFADRTVLVAGGGDSAIDMALMLEPVAKHVYIMHRRDRFRGMEHNVdllkasSVEIKTpfLIKQLAETATG 218
Cdd:pfam13738 143 HYSYVKDFHPYAGQKVVVIGGYNSAVDAALELVRKGARVTVLYRGSEWEDRDSDP------SYSLSP--DTLNRLEELVK 214

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 219 QLQLTM---KEVRGTTEETLAV-------------DDLIVNYGFIADNKVIRNwHVTPTMAHRLITVDTE-MNTDVPGIA 281
Cdd:pfam13738 215 NGKIKAhfnAEVKEITEVDVSYkvhtedgrkvtsnDDPILATGYHPDLSFLKK-GLFELDEDGRPVLTEEtESTNVPGLF 293


                  ...
gi 1799510656 282 AIG 284
Cdd:pfam13738 294 LAG 296
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
9-127 3.88e-10

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 60.64  E-value: 3.88e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   9 IIGGGPVGMFAAFYAGMRNARVQLLESLPELGGQVQALYpekiihdvAGYPAIK-GRELVAQLEKQLTQFP-IDIQLASP 86
Cdd:COG1148   145 VIGGGIAGMTAALELAEQGYEVYLVEKEPELGGRAAQLH--------KTFPGLDcPQCILEPLIAEVEANPnITVYTGAE 216

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1799510656  87 VTDVTGAMGDFTITTASGQQSHSK----AIIVATGSGAFEPRRLA 127
Cdd:COG1148   217 VEEVSGYVGNFTVTIKKGPREEIEievgAIVLATGFKPYDPTKLG 261
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 9-290 1.04e-09

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 59.38  E-value: 1.04e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   9 IIGGGPVGMFAAFYAGMRNARVQLLESLPELGGQVQalYpekiihdvaGYPAIKgrelvaqLEKQLTQFPIDIQLASPVT 88
Cdd:COG0493   126 VVGSGPAGLAAAYQLARAGHEVTVFEALDKPGGLLR--Y---------GIPEFR-------LPKDVLDREIELIEALGVE 187

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  89 DVTGAMGDFTITTASGQQSHsKAIIVATGSGAfePRRLAVDN--------AAEFENKQLFYHIPSVKQFADRTVLVAGGG 160
Cdd:COG0493   188 FRTNVEVGKDITLDELLEEF-DAVFLATGAGK--PRDLGIPGedlkgvhsAMDFLTAVNLGEAPDTILAVGKRVVVIGGG 264

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 161 DSAID---MALMLEpvAKHVYIMHRRDRFR--GMEHNVDLLKASSVEIKtpFLI--KQLAETATGQL------------- 220
Cdd:COG0493   265 NTAMDcarTALRLG--AESVTIVYRRTREEmpASKEEVEEALEEGVEFL--FLVapVEIIGDENGRVtglecvrmelgep 340

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1799510656 221 ----QLTMKEVRGtTEETLAVDDLIVNYGFIADNKVIRNWHVTPTMAHRLITVDTE-MNTDVPGIAAIGDTVTYA 290
Cdd:COG0493   341 desgRRRPVPIEG-SEFTLPADLVILAIGQTPDPSGLEEELGLELDKRGTIVVDEEtYQTSLPGVFAGGDAVRGP 414
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 1-179 2.28e-09

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 57.95  E-value: 2.28e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   1 MSAEYDLTIIGGGPVGMFAAFYAGMRNARVQLLESLPELGGQ-VQALYP------EKIIHDVAGYPA-------IKGREL 66
Cdd:COG2072     3 ATEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTwRDNRYPglrldtPSHLYSLPFFPNwsddpdfPTGDEI 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  67 VAQLEKQLTQFpidiQLASPV---TDVTGAMGD-----FTITTASGQQSHSKAIIVATGsgAF-EPRRLAVDNAAEFENK 137
Cdd:COG2072    83 LAYLEAYADKF----GLRRPIrfgTEVTSARWDeadgrWTVTTDDGETLTARFVVVATG--PLsRPKIPDIPGLEDFAGE 156

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1799510656 138 QL---FYhiPSVKQFADRTVLVAGGGDSAIDMALMLEPVAKHVYI 179
Cdd:COG2072   157 QLhsaDW--RNPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTV 199
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 4-285 8.58e-08

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 53.17  E-value: 8.58e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   4 EYDLTIIGGGPVGMFAAFYAGMRNARVQLLESlPELGGqvqA------------LYPEKIIHDV---------AGYPAIK 62
Cdd:COG1249     3 DYDLVVIGAGPGGYVAAIRAAQLGLKVALVEK-GRLGG---TclnvgcipskalLHAAEVAHEArhaaefgisAGAPSVD 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  63 GRELVAQLEKQLTQFPIDIQ--LASP-VTDVTGA---MGDFTITTASGQQSHSKAIIVATGSgafEPRRLAVDNAAE--- 133
Cdd:COG1249    79 WAALMARKDKVVDRLRGGVEelLKKNgVDVIRGRarfVDPHTVEVTGGETLTADHIVIATGS---RPRVPPIPGLDEvrv 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 134 FENKQLFY--HIPsvkqfadRTVLVAGGGDSAIDMALMLEPVAKHVYIMHRRDRF-RGMEHNV-----DLLKASSVEIKT 205
Cdd:COG1249   156 LTSDEALEleELP-------KSLVVIGGGYIGLEFAQIFARLGSEVTLVERGDRLlPGEDPEIsealeKALEKEGIDILT 228

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 206 PFLIKQLAETAtGQLQLTMKevRGTTEETLAVDDLIVNYGFIAdnkVIRNWH-----VTPTmAHRLITVDTEMNTDVPGI 280
Cdd:COG1249   229 GAKVTSVEKTG-DGVTVTLE--DGGGEEAVEADKVLVATGRRP---NTDGLGleaagVELD-ERGGIKVDEYLRTSVPGI 301


                  ....*
gi 1799510656 281 AAIGD 285
Cdd:COG1249   302 YAIGD 306
PRK06416 PRK06416
dihydrolipoamide dehydrogenase; Reviewed
 1-303 1.45e-07

dihydrolipoamide dehydrogenase; Reviewed


Pssm-ID: 235798 [Multi-domain]  Cd Length: 462  Bit Score: 52.46  E-value: 1.45e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   1 MSAEYDLTIIGGGPVGMFAAFYA---GMRNA---------------------------RVQLLESLPELGgqVQAlypEK 50
Cdd:PRK06416    1 FAFEYDVIVIGAGPGGYVAAIRAaqlGLKVAivekeklggtclnrgcipskallhaaeRADEARHSEDFG--IKA---EN 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  51 IIHDVAGYPAIKgRELVAQL----EKQLTQFPIDI-----QLASPVT-DVTGAMGDFTITTasgqqshsKAIIVATGSGA 120
Cdd:PRK06416   76 VGIDFKKVQEWK-NGVVNRLtggvEGLLKKNKVDIirgeaKLVDPNTvRVMTEDGEQTYTA--------KNIILATGSRP 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 121 FEPRRLavdnaaEFENKQLFY--------HIPsvkqfadRTVLVAGGGDSAIDMALMLEPVAKHVYIMHrrdrfrGMEH- 191
Cdd:PRK06416  147 RELPGI------EIDGRVIWTsdealnldEVP-------KSLVVIGGGYIGVEFASAYASLGAEVTIVE------ALPRi 207

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 192 --NVD---------LLKASSVEIKTPFLIKQLAETATGqlqLTMKEVRGTTEETLAVDDLIV---------NYGFiADNK 251
Cdd:PRK06416  208 lpGEDkeisklaerALKKRGIKIKTGAKAKKVEQTDDG---VTVTLEDGGKEETLEADYVLVavgrrpnteNLGL-EELG 283

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1799510656 252 VirnwhvtpTMAHRLITVDTEMNTDVPGIAAIGDTVtyaGKLGLIASGFGEA 303
Cdd:PRK06416  284 V--------KTDRGFIEVDEQLRTNVPNIYAIGDIV---GGPMLAHKASAEG 324
PRK12770 PRK12770
putative glutamate synthase subunit beta; Provisional
 9-299 3.44e-07

putative glutamate synthase subunit beta; Provisional


Pssm-ID: 237197 [Multi-domain]  Cd Length: 352  Bit Score: 51.14  E-value: 3.44e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   9 IIGGGPVGMFAAFYAGMRNARVQLLESLPELGGQVQALYPEKIIhdvagyPAIKGRELVAQLEKQLTQFPID--IQLASP 86
Cdd:PRK12770   23 IIGAGPAGLAAAGYLACLGYEVHVYDKLPEPGGLMLFGIPEFRI------PIERVREGVKELEEAGVVFHTRtkVCCGEP 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  87 VTDVTGAMGDFTITTASGQQSHSKAIIVATGSgaFEPRRL--------AVDNAAEFenkqLFY-------HIPSVK--QF 149
Cdd:PRK12770   97 LHEEEGDEFVERIVSLEELVKKYDAVLIATGT--WKSRKLgipgedlpGVYSALEY----LFRiraaklgYLPWEKvpPV 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 150 ADRTVLVAGGGDSAIDMAlmLEPV---AKHVYIMHRRDRFRG--MEHNVDLLKASSVEIK---TPFLIK--------QLA 213
Cdd:PRK12770  171 EGKKVVVVGAGLTAVDAA--LEAVllgAEKVYLAYRRTINEApaGKYEIERLIARGVEFLelvTPVRIIgegrvegvELA 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 214 ETATGQLQLTMK---EVRGTTEETLAVDDLIVNYGFIAdnkvirnwhvTPTMAHRL----------ITVDTEMNTDVPGI 280
Cdd:PRK12770  249 KMRLGEPDESGRprpVPIPGSEFVLEADTVVFAIGEIP----------TPPFAKEClgielnrkgeIVVDEKHMTSREGV 318

                         330       340
                  ....*....|....*....|
gi 1799510656 281 AAIGDTVTYAGKLGL-IASG 299
Cdd:PRK12770  319 FAAGDVVTGPSKIGKaIKSG 338
HI0933_like pfam03486
HI0933-like protein;
5-124 6.07e-07

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 50.66  E-value: 6.07e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   5 YDLTIIGGGPVGMFAAFYAGMRNARVQLLESLPELGGQV--------------------------------QALY---PE 49
Cdd:pfam03486   1 FDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLGRKIlisgggrcnvtnlseepdnflsrypgnpkflkSALSrftPW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  50 KII-----HDVA------G--YP-AIKGRELVAQLEKQLTQFPIDIQLASPVTDVT-GAMGDFTITTaSGQQSHSKAIIV 114
Cdd:pfam03486  81 DFIaffesLGVPlkeedhGrlFPdSDKASDIVDALLNELKELGVKIRLRTRVLSVEkDDDGRFRVKT-GGEELEADSLVL 159

                         170
                  ....*....|
gi 1799510656 115 ATGsGAFEPR 124
Cdd:pfam03486 160 ATG-GLSWPK 168
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
 9-288 1.46e-06

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 49.49  E-value: 1.46e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   9 IIGGGPVGMFAAFYAGMRNARVQLLESLPELGGQVqaLYpekiihdvaGYPAIK-GRELVAQLEKQLTQFPIDIQLASPV 87
Cdd:PRK12771  142 VIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMM--RY---------GIPAYRlPREVLDAEIQRILDLGVEVRLGVRV 210

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  88 -TDVTGAM--GDFtittasgqqshsKAIIVATgsGAFEPRRLAVD--------NAAEF-----ENKqlfyhipsvKQFAD 151
Cdd:PRK12771  211 gEDITLEQleGEF------------DAVFVAI--GAQLGKRLPIPgedaagvlDAVDFlravgEGE---------PPFLG 267

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 152 RTVLVAGGGDSAIDMA-LMLEPVAKHVYIMHRRDRFRgM---EHNVDLLKASSVEIKTPFLIKQLAETATGQLQLTMKEV 227
Cdd:PRK12771  268 KRVVVIGGGNTAMDAArTARRLGAEEVTIVYRRTRED-MpahDEEIEEALREGVEINWLRTPVEIEGDENGATGLRVITV 346

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1799510656 228 -------------RGTTEETLAVDDLIVNYGFIADNKVIRNWHvTPTMAHRLITVD-TEMNTDVPGIAAIGDTVT 288
Cdd:PRK12771  347 ekmeldedgrpspVTGEEETLEADLVVLAIGQDIDSAGLESVP-GVEVGRGVVQVDpNFMMTGRPGVFAGGDMVP 420
TIGR00275 TIGR00275
flavoprotein, HI0933 family; The model when searched with a partial length search brings in ...
 9-121 3.78e-06

flavoprotein, HI0933 family; The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity]


Pssm-ID: 272992 [Multi-domain]  Cd Length: 400  Bit Score: 47.98  E-value: 3.78e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   9 IIGGGPVGMFAAFYAGMRNARVQLLESLPELG------------------------------------------GQVQAL 46
Cdd:TIGR00275   2 IIGGGAAGLMAAITAARAGLSVLLLEKNKKIGkkllisgggrcnltnscptpefvayyprngkflrsalsrfsnKDLIDF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  47 YPEKIIHDVAG-----YP-AIKGRELVAQLEKQLTQFPIDIQLASPVTDVTGAMGDFTITTaSGQQSHSKAIIVATGSGA 120
Cdd:TIGR00275  82 FESLGLELKVEedgrvFPcSDSAADVLDALLNELKELGVEILTNSKVKSIEKEDGGFGVET-SGGEYEADKVIIATGGLS 160


                  .
gi 1799510656 121 F 121
Cdd:TIGR00275 161 Y 161
FadH2 COG0446
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ...
 65-309 2.93e-05

NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];


Pssm-ID: 440215 [Multi-domain]  Cd Length: 322  Bit Score: 45.19  E-value: 2.93e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  65 ELVAQLEKQLTQFPIDIQLASPVTDVtgamgDF---TITTASGQQSHSKAIIVATGSgafEPRRLAVDNAaEFENKQLFY 141
Cdd:COG0446    37 DLLVRTPESFERKGIDVRTGTEVTAI-----DPeakTVTLRDGETLSYDKLVLATGA---RPRPPPIPGL-DLPGVFTLR 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 142 HIP-------SVKQFADRTVLVAGGGdsaidmALMLEpVA-------KHVYIMHRRDR-FRGMEHNV-----DLLKASSV 201
Cdd:COG0446   108 TLDdadalreALKEFKGKRAVVIGGG------PIGLE-LAealrkrgLKVTLVERAPRlLGVLDPEMaalleEELREHGV 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 202 EIKTPFLIKQLAETAtgqlqltMKEVRGTTEETLAVDDLIVNYGFIADNKVIRNWHVTpTMAHRLITVDTEMNTDVPGIA 281
Cdd:COG0446   181 ELRLGETVVAIDGDD-------KVAVTLTDGEEIPADLVVVAPGVRPNTELAKDAGLA-LGERGWIKVDETLQTSDPDVY 252

                         250       260       270
                  ....*....|....*....|....*....|..
gi 1799510656 282 AIGDTVTY----AGKLGLIASgfgeAPNAVNQ 309
Cdd:COG0446   253 AAGDCAEVphpvTGKTVYIPL----ASAANKQ 280
PRK06116 PRK06116
glutathione reductase; Validated
 1-285 4.78e-05

glutathione reductase; Validated


Pssm-ID: 235701 [Multi-domain]  Cd Length: 450  Bit Score: 44.76  E-value: 4.78e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   1 MSAEYDLTIIGGGPVGMFAAFYAGMRNARVQLLESLpELGGQ-VQ------------ALYPEKIIHDVAGY---PAIKG- 63
Cdd:PRK06116    1 MTKDYDLIVIGGGSGGIASANRAAMYGAKVALIEAK-RLGGTcVNvgcvpkklmwygAQIAEAFHDYAPGYgfdVTENKf 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  64 --RELVAQLEK---QLTQFPIDIQLASPVTDVTGaMGDF----TITTaSGQQSHSKAIIVATGSGAFEP----RRLAVDN 130
Cdd:PRK06116   80 dwAKLIANRDAyidRLHGSYRNGLENNGVDLIEG-FARFvdahTVEV-NGERYTADHILIATGGRPSIPdipgAEYGITS 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 131 AAEFENKQLfyhiPsvkqfadRTVLVAGGGDSAIDMALMLEPVAKHVYIMHRRDRF-RGM-----EHNVDLLKASSVEIK 204
Cdd:PRK06116  158 DGFFALEEL----P-------KRVAVVGAGYIAVEFAGVLNGLGSETHLFVRGDAPlRGFdpdirETLVEEMEKKGIRLH 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656 205 TPFLIKQLAETATGQLQLTMKevrgtTEETLAVDDLIVNYGFIA--DNKVIRNWHVTpTMAHRLITVDTEMNTDVPGIAA 282
Cdd:PRK06116  227 TNAVPKAVEKNADGSLTLTLE-----DGETLTVDCLIWAIGREPntDGLGLENAGVK-LNEKGYIIVDEYQNTNVPGIYA 300


                  ...
gi 1799510656 283 IGD 285
Cdd:PRK06116  301 VGD 303
Pyr_redox pfam00070
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 154-205 5.84e-05

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 425450 [Multi-domain]  Cd Length: 80  Bit Score: 41.04  E-value: 5.84e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1799510656 154 VLVAGGGDSAIDMALMLEPVAKHVYIMHRRDRFRGMEHN------VDLLKASSVEIKT 205
Cdd:pfam00070   2 VVVVGGGYIGLELAGALARLGSKVTVVERRDRLLPGFDPeiakilQEKLEKNGIEFLL 59
PRK12843 PRK12843
FAD-dependent oxidoreductase;
2-41 1.43e-04

FAD-dependent oxidoreductase;


Pssm-ID: 237225 [Multi-domain]  Cd Length: 578  Bit Score: 43.57  E-value: 1.43e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1799510656   2 SAEYDLTIIGGGPVGMFAAFYAGMRNARVQLLESLPELGG 41
Cdd:PRK12843   14 DAEFDVIVIGAGAAGMSAALFAAIAGLKVLLVERTEYVGG 53
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
9-43 1.57e-04

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 39.44  E-value: 1.57e-04
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1799510656   9 IIGGGPVGMFAAFYAGMRNARVQLLESLPELGGQV 43
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNA 35
FadH2 COG0446
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ...
 7-117 3.94e-04

NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];


Pssm-ID: 440215 [Multi-domain]  Cd Length: 322  Bit Score: 41.72  E-value: 3.94e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   7 LTIIGGGPVGMFAAFYAGMRNARVQLLESLPELGGQVqalypekiihdvagypaikGRELVAQLEKQLTQFPIDIQLASP 86
Cdd:COG0446   127 AVVIGGGPIGLELAEALRKRGLKVTLVERAPRLLGVL-------------------DPEMAALLEEELREHGVELRLGET 187

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1799510656  87 VTDVTGAmGDFTITTASGQQSHSKAIIVATG 117
Cdd:COG0446   188 VVAIDGD-DKVAVTLTDGEEIPADLVVVAPG 217
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
1-170 3.95e-04

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 41.86  E-value: 3.95e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656   1 MSAEYDLTIIGGGPVGMFAAFY---AGMRNARVQLLESLPELG-GQ------------VQA----LYPEKIIH------- 53
Cdd:COG4529     2 TGARKRIAIIGGGASGTALAIHllrRAPEPLRITLFEPRPELGrGVaystdspehllnVPAgrmsAFPDDPDHflrwlre 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799510656  54 ---------DVAGYP--AIKGRELVAQLEKQLTQFPIDIQL---ASPVTDVTGAMGDFTITTASGQQSHSKAIIVATGSG 119
Cdd:COG4529    82 ngaraapaiDPDAFVprRLFGEYLRERLAEALARAPAGVRLrhiRAEVVDLERDDGGYRVTLADGETLRADAVVLATGHP 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1799510656 120 AfePRRLAVDNAAefeNKQLF---YHIPSVKQF-ADRTVLVAGGGDSAIDMALML 170
Cdd:COG4529   162 P--PAPPPGLAAG---SPRYIadpWPPGALARIpPDARVLIIGTGLTAIDVVLSL 211
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
 6-73 7.76e-04

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 41.06  E-value: 7.76e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1799510656   6 DLTIIGGGPVGMFAAFYAGMRNARVQLLESLPELGGQ--VQALYPekIIHD-VAGYPAIKG--RELVAQLEKQ 73
Cdd:pfam12831   1 DVVVVGGGPAGVAAAIAAARAGAKVLLVERRGFLGGMltSGLVGP--DMGFyLNKEQVVGGiaREFRQRLRAR 71
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 9-59 9.54e-04

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 40.59  E-value: 9.54e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1799510656   9 IIGGGPVGMFAAFYAGMRNARVQLLESLPELGGQVQAlypekiiHDVAGYP 59
Cdd:COG1232     6 VIGGGIAGLTAAYRLAKAGHEVTVLEASDRVGGLIRT-------VEVDGFR 49
PRK06481 PRK06481
flavocytochrome c;
1-41 8.80e-03

flavocytochrome c;


Pssm-ID: 180584 [Multi-domain]  Cd Length: 506  Bit Score: 37.89  E-value: 8.80e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1799510656   1 MSAEYDLTIIGGGPVGMFAAFYAGMRNARVQLLESLPELGG 41
Cdd:PRK06481   58 LKDKYDIVIVGAGGAGMSAAIEAKDAGMNPVILEKMPVAGG 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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