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Conserved domains on  [gi|1895817118|gb|QNJ18335|]
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hypothetical protein SynA1840_02831 [Synechococcus sp. A18-40]

Protein Classification

DUF3134 domain-containing protein( domain architecture ID 10568321)

DUF3134 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3134 pfam11332
Protein of unknown function (DUF3134); This family of proteins with unknown function appears ...
 18-85 4.19e-19

Protein of unknown function (DUF3134); This family of proteins with unknown function appears to be restricted to Cyanobacteria.


:

Pssm-ID: 431820  Cd Length: 68  Bit Score: 73.81  E-value: 4.19e-19
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1895817118 18 NPSLTRYGRRDPAPVLPLREEPDLLSWLEASGRLVADEESgSPEVSTVEEEELSALMGEKEDYNNADE 85
Cdd:pfam11332  1 NPSLREEPRYQPAPVIPLKQESSLLDWLESNGRLIARDPV-EEDYLLEEEEEISELMGGDDDDYDDDD 67
 
Name Accession Description Interval E-value
DUF3134 pfam11332
Protein of unknown function (DUF3134); This family of proteins with unknown function appears ...
 18-85 4.19e-19

Protein of unknown function (DUF3134); This family of proteins with unknown function appears to be restricted to Cyanobacteria.


Pssm-ID: 431820  Cd Length: 68  Bit Score: 73.81  E-value: 4.19e-19
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1895817118 18 NPSLTRYGRRDPAPVLPLREEPDLLSWLEASGRLVADEESgSPEVSTVEEEELSALMGEKEDYNNADE 85
Cdd:pfam11332  1 NPSLREEPRYQPAPVIPLKQESSLLDWLESNGRLIARDPV-EEDYLLEEEEEISELMGGDDDDYDDDD 67
 
Name Accession Description Interval E-value
DUF3134 pfam11332
Protein of unknown function (DUF3134); This family of proteins with unknown function appears ...
 18-85 4.19e-19

Protein of unknown function (DUF3134); This family of proteins with unknown function appears to be restricted to Cyanobacteria.


Pssm-ID: 431820  Cd Length: 68  Bit Score: 73.81  E-value: 4.19e-19
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1895817118 18 NPSLTRYGRRDPAPVLPLREEPDLLSWLEASGRLVADEESgSPEVSTVEEEELSALMGEKEDYNNADE 85
Cdd:pfam11332  1 NPSLREEPRYQPAPVIPLKQESSLLDWLESNGRLIARDPV-EEDYLLEEEEEISELMGGDDDDYDDDD 67
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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