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Conserved domains on  [gi|1914801350|gb|QOI74425|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Caiman latirostris]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009571)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-114 1.34e-48

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 150.80  E-value: 1.34e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   1 MNLLIMFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIH 80
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1914801350  81 TINPMKTIMCTITVFLLLLIGLGYEWLQGGLEWA 114
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
 
Name Accession Description Interval E-value
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-114 1.34e-48

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 150.80  E-value: 1.34e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   1 MNLLIMFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIH 80
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1914801350  81 TINPMKTIMCTITVFLLLLIGLGYEWLQGGLEWA 114
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 1.27e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.41  E-value: 1.27e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350  18 IALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPltWSIHTINPMKTIMCTITVFLL 97
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFP--WAVSFRELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1914801350  98 -LLIGLGYEWLQGGLE 112
Cdd:pfam00507  79 iLLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 3-113 2.54e-26

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 94.42  E-value: 2.54e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   3 LLIMFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIHTI 82
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFREL 87

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1914801350  83 NPMKTImcTITVFL-LLLIGLGYEWLQGGLEW 113
Cdd:COG0838    88 GWFGLI--EMLVFIaILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-114 1.34e-48

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 150.80  E-value: 1.34e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   1 MNLLIMFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIH 80
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1914801350  81 TINPMKTIMCTITVFLLLLIGLGYEWLQGGLEWA 114
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 1.13e-44

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 140.82  E-value: 1.13e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   1 MNLLI-MFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSI 79
Cdd:MTH00136    1 MNLITtILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1914801350  80 HTINPMKTIMCTITVFLLLLIGLGYEWLQGGLEWAE 115
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-115 1.28e-43

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 138.20  E-value: 1.28e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   3 LLIMFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIHTI 82
Cdd:MTH00069    2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1914801350  83 NPMKTIMCTITVFLLLLIGLGYEWLQGGLEWAE 115
Cdd:MTH00069   82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 6.42e-37

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 121.24  E-value: 6.42e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   1 MNLLIMFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIH 80
Cdd:MTH00042    2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1914801350  81 TINPmKTIMCTITVFLLLL-IGLGYEWLQGGLEWAE 115
Cdd:MTH00042   82 ITNP-STLLPISLIFLIILtIGLVYEWVNGGLEWAE 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 1.85e-36

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 120.04  E-value: 1.85e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   1 MNLLIMFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIH 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1914801350  81 TINPMKTIMCTITVFLLLLIGLGYEWLQGGLEWAE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-113 1.20e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 102.67  E-value: 1.20e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   1 MNLLIM-FLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSI 79
Cdd:MTH00203    1 MNLIMLfFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1914801350  80 HTINPmkTIMCTITVFLLLLIGLGYEWLQGGLEW 113
Cdd:MTH00203   81 QLSSL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 1-113 2.39e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 101.78  E-value: 2.39e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   1 MNLLIMFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIH 80
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1914801350  81 TINPMKTIMCTITVFLLLLIGLGYEWLQGGLEW 113
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-115 3.96e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 101.47  E-value: 3.96e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   1 MNLLIMFLMTLITTTALIALNLMTTK-TSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSI 79
Cdd:MTH00148    2 LSILLSLLFALILSPVLLLLGLVLSKrSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1914801350  80 HTINPMKTIMCTITVFLLLLIGLGYEWLQGGLEWAE 115
Cdd:MTH00148   82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 1.27e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.41  E-value: 1.27e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350  18 IALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPltWSIHTINPMKTIMCTITVFLL 97
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFP--WAVSFRELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1914801350  98 -LLIGLGYEWLQGGLE 112
Cdd:pfam00507  79 iLLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 3-113 2.54e-26

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 94.42  E-value: 2.54e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   3 LLIMFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIHTI 82
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFREL 87

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1914801350  83 NPMKTImcTITVFL-LLLIGLGYEWLQGGLEW 113
Cdd:COG0838    88 GWFGLI--EMLVFIaILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 7-114 1.47e-25

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 92.62  E-value: 1.47e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   7 FLMTLITTTALIALNLMTTK----TSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIHTI 82
Cdd:PRK06602   11 FLIFLIVAIGLGILLLVAGKllgpRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREI 90

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1914801350  83 NPMKTImcTITVFLL-LLIGLGYEWLQGGLEWA 114
Cdd:PRK06602   91 GWLGFV--EAMIFILvLLVGLVYLWRKGALDWE 121
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-115 9.55e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 90.44  E-value: 9.55e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   1 MNLLIMFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIH 80
Cdd:MTH00202    3 LILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLK 82

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1914801350  81 TINPMKTIMCTITVFLLLLIGLGYEWLQGGLEWAE 115
Cdd:MTH00202   83 SSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 1-113 1.59e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 89.77  E-value: 1.59e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   1 MNLLIMFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIH 80
Cdd:MTH00055    6 LGIFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYN 85

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1914801350  81 TINPMKTimCTITVFLLLL-IGLGYEWLQGGLEW 113
Cdd:MTH00055   86 QIGLFGF--WVMYLFLIILtIGLIYEWVKGGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-113 3.47e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 88.97  E-value: 3.47e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   1 MNLLIMFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIH 80
Cdd:MTH00018    1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1914801350  81 TINPMKtiMCTITVFLLLL-IGLGYEWLQGGLEW 113
Cdd:MTH00018   81 QIAPFG--FWTMVGFLFILtLGLIYEWIKGGLEW 112
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-114 3.30e-22

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 83.75  E-value: 3.30e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   1 MNLLIMFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIH 80
Cdd:MTH00012    3 LMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILM 82

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1914801350  81 TINPMKTIMCTITVFLLLLIGLGYEWLQGGLEWA 114
Cdd:MTH00012   83 TSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 3-113 1.29e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 79.98  E-value: 1.29e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   3 LLIMFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIHTI 82
Cdd:MTH00030   13 LLGVGIILLLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQL 92

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1914801350  83 NpMKTIMCTITVFLLLLIGLGYEWLQGGLEW 113
Cdd:MTH00030   93 N-LFSFWIVYTFLIVLAIGLAYEWIKGGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 32-113 1.12e-12

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 59.62  E-value: 1.12e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350  32 EKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIHTINPMKTIMCTITVfLLLLIGLGYEWLQGGL 111
Cdd:CHL00022   39 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSAFIEALIFV-LILIVGLVYAWRKGAL 117


                  ..
gi 1914801350 112 EW 113
Cdd:CHL00022  118 EW 119
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 3-113 2.89e-11

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 55.83  E-value: 2.89e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   3 LLIMFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDP----LGSARLPlsIRFFMVAILFLLFDLEVAILLPltWS 78
Cdd:PRK07928    7 ILVLGALAAAFAVVSVVVASLVGPKRYNRAKLEAYECGIEPtpqpAGGGRFP--VKYYLTAMLFIVFDIEIVFLYP--WA 82

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1914801350  79 IH-----TINPMKTIMCTITVFllllIGLGYEWLQGGLEW 113
Cdd:PRK07928   83 VSfdalgVFGLVEMALFMLTVF----VAYAYVWRRGGLEW 118
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-113 1.73e-09

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 51.05  E-value: 1.73e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   1 MNLLIMFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLtwsih 80
Cdd:MTH00092    2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL----- 76

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1914801350  81 TINPMKTIMCTITVFLLLLIGLGYEWLQGGLEW 113
Cdd:MTH00092   77 LVSDFSSLISFFMLMIFIFFGFYMEWWYGKLIW 109
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
7-113 5.34e-09

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 50.05  E-value: 5.34e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   7 FLMTLITTTALIALNLMTTKTSP-----DQEKL--SPYECGFDPLGSARlPLSIRFFMVAILFLLFDLEVAILLPltWSI 79
Cdd:PRK08489   14 FVLLVLTFVAFFLTTRLARFISRklaqkNTEKLklAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFP--WAV 90

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1914801350  80 HTINPMKTIMCTITVF-LLLLIGLGYEWLQGGLEW 113
Cdd:PRK08489   91 DFKLLGLFGLIEMLLFiVLLTIGFIYAWKKGALEW 125
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
29-113 8.40e-09

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 49.36  E-value: 8.40e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350  29 PDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIHTINPMKTIMCTITVfLLLLIGLGYEWLQ 108
Cdd:PRK07756   38 PSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFALIEMLIFV-VMLLVGLAYAWKK 116


                  ....*
gi 1914801350 109 GGLEW 113
Cdd:PRK07756  117 KVLQW 121
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 9-113 5.95e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 37.10  E-value: 5.95e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1914801350   9 MTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSIHTINPMKTI 88
Cdd:PRK06432   39 ISLKTEDILKKAAYEDTPPGSDQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPFI 118

                          90       100
                  ....*....|....*....|....*
gi 1914801350  89 McTITVFLLLLIGLGYEWLQGGLEW 113
Cdd:PRK06432  119 E-TLIFLAMPLFAVYYAFKMGYMRW 142
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 35-113 1.25e-03

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 35.64  E-value: 1.25e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1914801350  35 SPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPLTWSihtINPMKTIMCTITVFLLLLIGLGYEWLQGGLEW 113
Cdd:MTH00060   39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQ---GLLFYNFWYYYFFLLLLFLGFVVELFSGYVRW 114
PRK06073 PRK06073
NADH dehydrogenase subunit A; Validated
 5-75 1.68e-03

NADH dehydrogenase subunit A; Validated


Pssm-ID: 235690  Cd Length: 124  Bit Score: 35.35  E-value: 1.68e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1914801350   5 IMFLMTLITTTALIALNLMTTKTSPDQEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEVAILLPL 75
Cdd:PRK06073   12 LVIVLGLAAGVGTYKLLKLILPSKPTPLKVSRYEAGNPPTGPAKLWLPMQYYGYLLLFLTLEPIVVLLLLI 82
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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