|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
2.69e-163 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 459.67 E-value: 2.69e-163
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 1 MNPQAKLISTTSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWS 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 81 TGQWDITQFTHPMSCVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAPSLNPTLLSMMAIA 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMAIILIYNPQLTLVTFYLYSLTTAAIFFILNTTSILKLSTVMTAWTKIPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 241 TTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRLAYCTTITLPPNSANFMKQWRINKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*
gi 1953441022 321 VNTLTTTLTTLSITLLPLSPMILSI 345
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTI 345
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-320 |
2.05e-129 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 373.76 E-value: 2.05e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 1 MNPQAKLISTTSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWS 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 81 TGQWDITQFTHPMSCVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAPSlNPTLLSMMAIA 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMAIILIYNPQLTLVTFYLYSLTTAAIFFILNTTSILKLSTVMTAWTKIPSL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 241 TTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRLAYCTTITLPPNSANFMKQWRINKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
2.62e-127 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 368.48 E-value: 2.62e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 1 MNPQAKLISTTSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWS 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 81 TGQWDITQFTHPMSCVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAPSLNPTLLSMMAIA 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMAIILIYNPQLTLVTFYLYSLTTAAIFFILNTTSILKLSTVMTAWTKIPSL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 241 TTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRLAYCTTITLPPNSANFMKQWRINKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 1953441022 321 VNTLTTTLTTLSITLLPLSPMILSI 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-320 |
3.62e-112 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 329.88 E-value: 3.62e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 1 MNPQAKLISTTSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWS 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 81 TGQWDITQFTHPMSCVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAPSLNPTLLSMMAIA 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMAIILIYNPQLTLVTFYLYSLTTAAIFFILNTTSILKLSTVMTAWTKIPSL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 241 TTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRLAYCTTITLPPNSANFMKQWRINKP 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.79e-93 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 281.86 E-value: 2.79e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 1 MNPQAKLISTTSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWS 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 81 TGQWDITQFTHPMSCVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAPSLNPTLLSMMAIA 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMAIILIYNPQLTLVTFYLYSLTTAAIFFILNTTSILKLSTVMTAWTKIPSL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 241 TTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRLAYCTTITLPPNSANFMKQWRINKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 1953441022 321 VNTLTTTLTTLSITLLPLSPMILSIS 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-322 |
3.16e-84 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 258.71 E-value: 3.16e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 1 MNPQAKLISTTSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWS 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 81 TGQWDITQFTHPMSCVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAPSLNPTLLSMMAIA 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMAIILIYNPQLTLVTFYLYSLTTAAIFFILNTTSILKLSTVMTAWTKIPSL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 241 TTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRLAYCTTITLPPNSANFMKQWRINKP 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
..
gi 1953441022 321 VN 322
Cdd:MTH00041 321 IT 322
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
6.08e-58 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 190.42 E-value: 6.08e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 1 MNPQAKLISTTSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWS 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 81 TGqwditqFTHPMSCVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTapsLNPTLLSMMAIA 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMAIILIYNPQLTLVTFYLYSLTTAAIFFILNTTSILKLSTVMTAWTKIPSL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 241 TTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRLAYcTTITLPPNSANFMKQWRINKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISY-SSLMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|...
gi 1953441022 321 VNTLTTTLTTLSITLLPLSPMIL 343
Cdd:MTH00160 312 SLILNFLSFISLFGLILSSLLFL 334
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-322 |
6.41e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 171.99 E-value: 6.41e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 13 LLLGTTITISSNHWMMAWTGLEINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWSTGQWDITqfthp 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 93 mscVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAPSLNP-TLLSMMAIASAALGGWMGLN 171
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSALVGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 172 QTQIRKILAFSSISHLGWMAIILIYNPQLTLVTFYLYSLTTAAIFFILNTTSILKLSTvMTAWTKIPSLTTILMLSLLSL 251
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD-LGSLKPSYKTGLSIISLLLSL 243
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1953441022 252 AGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRLAYCTTITLpPNSANFMKQWRINKPVN 322
Cdd:MTH00144 244 GGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSS-SKSKKSNSSKVLNSSII 313
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-311 |
6.43e-46 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 159.17 E-value: 6.43e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 7 LISTTSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLLFSSmtnawsTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 87 TQFTHPMSCVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAPSLNPTLLSMMAIASAALGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 167 WMGLNQTQIRKILAFSSISHLGWMAIILIYNPQLTLVTFYLYSLTTAAIFFILNTTSILKLSTVMTAWTKIPSLTTILML 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1953441022 247 SLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRLAYcTTITLPPNSANF 311
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSSL 306
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
12-302 |
8.65e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 153.29 E-value: 8.65e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 12 SLLLGTTITISSNHWMMAWTGLEINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWSTgqwditqFTH 91
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YLS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 92 PMSCVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMKFPPttLLFLTAPSLNPTLLSMMAIASAALGGWMGLN 171
Cdd:MTH00197 79 LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 172 QTQIRKILAFSSISHLGWMAIILIYNPQLTLVTFYLYSLTTAAIFFILNTTSILKLSTVMTAWTKIPSLTTILMLSLLSL 251
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSL 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1953441022 252 AGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRLAYCTTI 302
Cdd:MTH00197 237 GGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
1.22e-36 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 137.56 E-value: 1.22e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 14 LLGTTITISSNHWMMAWTGLEINTLAILPLIS-KAHHPRAIEAATKYFLIQATASTLLLF-SSMTNAwSTGQWDITQFTH 91
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIAA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 92 PMS------------CVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMK---FPPTTLLFLTA-PSLNP---T 152
Cdd:COG1007 191 ALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAALLRLLVEAfPGLAAdwqL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 153 LLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMAIILIYNPQLTL--VTFYL--YSLTTAAIFFIlnttsILKLS 228
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAV-----ILLLS 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 229 TVMTAWTKI----------PSLTTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRLAY 298
Cdd:COG1007 346 RKGGEAEEIedlaglarrsPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
7.11e-31 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 121.85 E-value: 7.11e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 14 LLGTTITISSNHWMMAWTGLEINTLAILPLISKA-HHPRAIEAATKYFLIQATASTLLLFSSMTNAWSTGQWDITQFTHP 92
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAALRrDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 93 ------------MSCVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMK---FPPTTLLFLTAPSLNPT----L 153
Cdd:PRK05777 193 ladgsgnsllllFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLRLLVVAFGGLSEdwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 154 LSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMAIILIYNPQLTLVT--FYL--YSLTTAAIFFIL--------NT 221
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAvlFYLlaYLFMTLGAFGVIsllrrkggEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1953441022 222 TSILKLStvMTAWTKiPSLTTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRL 296
Cdd:PRK05777 353 ESISDFA--GLSKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
3.01e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 110.12 E-value: 3.01e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 13 LLLGTTITISSNHWMMAWTGLEINTLAILPLI-SKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWSTGQWDI----- 86
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLsyinl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 87 --------TQFTHPMSCVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAPSLNptLLSMMA 158
Cdd:MTH00196 82 vlnsgqsfSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 159 IASAALGGWMGLNQTQIRKILAFSSISHLGW----MAIILIYNPQLTLVTFYLYSLTTAAIFFIL-----NTTSILKLST 229
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFvlwgIEIGSFESIQASLVYLFIYIIMSICVFSIIlalnvYKNLIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1953441022 230 VMtawTKIPSLTTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRL 296
Cdd:MTH00196 240 LS---RRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
1.11e-25 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 106.96 E-value: 1.11e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 14 LLGTTITISSNHWMMAWTGLEINTLAILPLIS-KAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWSTGQWDITQFTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 93 ------------MSCVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMK---FPPTTLLFLTAPS----LNPTL 153
Cdd:TIGR01770 192 lsngmlnislllLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaiFAVFLRLFLYILFgfseAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 154 LSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMAIILIYNPQLTL--VTFYL--YSLTTAAIFFIL------NTTS 223
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYIfiYALMSLGAFGVLsllrsyKDEW 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1953441022 224 ILKLSTVMTAWTKIPSLTTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 IEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
8.18e-25 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 104.33 E-value: 8.18e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 13 LLLGTTITISSNHWMMAWTGLEINTLAILPLIS-KAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWSTGQWDITQFTH 91
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGINS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 92 PMSC----VLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAPSLNPTLLSmmAIASAALGGW 167
Cdd:MTH00199 186 ILTGdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 168 MGLNQTQIRKILAFSSISHLGW----MAIILIYNPQLTLVTFYLYSLTTAAIFFI---LNTTSILkLSTVMTAWTKIPSL 240
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFSIilsLKLTKGL-IVEVSGLSRKNPVI 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1953441022 241 TTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRL 296
Cdd:MTH00199 343 ALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
1.25e-24 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 101.24 E-value: 1.25e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 23 SNHWMMAWTGLEINTLAILPLI-SKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWSTGQWDITQF-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 91 HPMSCVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMK----FPPTTLLFLTAPSLN--PTLLSMMAIASAAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVkaggYGLIRRSLLYLPSSPfiQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 165 GGWMGLNQTQIRKILAFSSISHLGWMAIIL----IYNPQLTLVTFYLYSLTTAAIF-----FILNTTSILKLSTVMTAWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFlcagsVIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 1953441022 236 KIPSLTTILMLSLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
8.09e-23 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 98.30 E-value: 8.09e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 13 LLLGTTITISSNHWMMAWTGLEINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWSTGQWDITQFTHP 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 93 MS----------CVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMK--------------FPPTTLLFLTaps 148
Cdd:COG0651 196 LAeldpglllaaFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTkvgvyailrvltllFGADPALFLG--- 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 149 lnpTLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMAI-ILIYNPQLTLVTFYLY---SLTTAAIFF----ILN 220
Cdd:COG0651 273 ---TLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLgLGLGTPLGLAGALFHLlnhALAKALLFLaagaIER 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1953441022 221 TTSILKLSTVMTAWTKIPSLTTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRL 296
Cdd:COG0651 350 ATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
1.37e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 80.67 E-value: 1.37e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 15 LGTTITISSNHWMMAWTGLEINTLAILPLISKAHHPRAI---------EAATKYFLIQATASTLLLFSSMTNAWSTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 84 ------------WDITQFTHPMSCVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMKFppTTLLFLTAPSLNP 151
Cdd:MTH00198 279 mlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 152 TLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMAIILIYNPQLTLVTFYLYSL----TTAAIFFIL-------- 219
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVtylvSALASFTVIctleefgt 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 220 -------------NTTSILKLSTVMTAWTKIPSLTTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLS 286
Cdd:MTH00198 437 rtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330
....*....|....*..
gi 1953441022 287 LLGL-------FFYLRL 296
Cdd:MTH00198 517 LFAIictcisaFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
2.13e-14 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 73.88 E-value: 2.13e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 51 RAIEAATKYFLIQATASTLLLFS-SMTNAWSTGQWDI---------TQFTHPMSC----VLLTIAISMKLGLVPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEIELqeivnglinTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 117 EVLQGSSLSTSLLLATVMKFP----PTTLLFLTAPSLNP---TLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAasalATRIFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 190 MAIILI-------YNPQLTLVTFYLY-SLTTAA--IFFILNT--TSILKLSTVmtaWTKIPSLTTILMLSLLSLAGLPPL 257
Cdd:CHL00049 319 VIIGIIvgdsndgYASMITYMLFYIFmNLGTFAciVLFGLRTgtDNIRDYAGL---YTKDPFLALSLALCLLSLGGIPPL 395
|
....*.
gi 1953441022 258 TGFLPK 263
Cdd:CHL00049 396 AGFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
7.90e-14 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 72.01 E-value: 7.90e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 50 PRAIEAATKYFLIQATASTLLLF-SSMTNAWSTGQWDITQFTHPM----------SCVLLTIAISMKLGLVPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSAIALALitspslglalALVFVIAGIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 119 LQGSSLSTSLLLATVMK---FPPTTLLFLTA-PSLNP---TLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMA 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKaagFALAIRLLVTAfPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 192 IILIYNPQLTLVTFYLYSLT---------TAAIFFILNTTSIlKLSTVMTAWTKIPSLTTILMLSLLSLAGLPPLTGFLP 262
Cdd:PRK02504 317 IGLVAGTEAGYASMVFYLLAylfmnlgafACVILFSLRTGTD-QISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFG 395
|
.
gi 1953441022 263 K 263
Cdd:PRK02504 396 K 396
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
43-267 |
7.78e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 62.79 E-value: 7.78e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 43 LISKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWSTGQW--DITQFT-HPMS-------CVLLTIAISMKLGLVPFH 112
Cdd:COG1008 150 LIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAaAPLPltaqlllFLAFFIAFAVKVPMFPFH 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 113 FWFPEVLQGSSLSTSLLLATVMK--------------FPPTTLLFltAPslnptLLSMMAIASAALGGWMGLNQTQIRKI 178
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLkmggygllrfalplFPEASAYF--AP-----LLAALGVIGIIYGALVALAQTDLKRL 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 179 LAFSSISHLGWMAI-ILIYNPQ-LTLVTFYLYS--LTTAAIFFI-------LNTTSILKLSTVmtaWTKIPSLTTILMLS 247
Cdd:COG1008 303 IAYSSVSHMGFVLLgIFALNPLgLQGAVLQMVShgLITAALFLLvgvlydrTHTRDIADLGGL---AKRMPVLAALFLLA 379
|
250 260
....*....|....*....|
gi 1953441022 248 LLSLAGLPPLTGFLPKWLII 267
Cdd:COG1008 380 ALASLGLPGTSGFVGEFLVL 399
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
9.66e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 62.65 E-value: 9.66e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 50 PRAIEAATKYFLIQATASTLLLFSSMTNAWSTGQ-WDITQF-THPMSCVLLT-------IAISMKLGLVPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELlNLPLPFGVQTwlflaffIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 120 QGSSLSTSLLLATVMK-------------FPPTTLLFLtapslnpTLLSMMAIASAALGGWMGLNQTQIRKILAFSSISH 186
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKmgtygflrfnlplFPDASLYFA-------PVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 187 LGWMAI-ILIYNPQLTL-VTFYLYS--LTTAAIFFILNT----TSILKLSTVMTAWTKIPSLTTILMLSLLSLAGLPPLT 258
Cdd:TIGR01972 305 MGFVLLgIFSFNELGISgAVFQMIShgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
250
....*....|
gi 1953441022 259 GFLPKWLIIQ 268
Cdd:TIGR01972 385 GFVGEFLILL 394
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-298 |
1.17e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 62.48 E-value: 1.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 48 HHPRAIEAATKYFLIQATASTLLLFSSMTNAWSTGQWDITQ-FTHPMS----------CVLLTIAISMKLGLVPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSElLAAAPTilssplltliLLLLLLGAFGKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 117 EVLQGsslstslllatvmkfpPTT----------------LLFLTAP--SLNPTLLSMMAI---ASAALGGWMGLNQTQI 175
Cdd:COG1009 236 DAMEG----------------PTPvsallhaatmvkagvyLLARLSPlfALSPVWLTVVAIigaITALFAALIALAQTDI 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 176 RKILAFSSISHLGWMAIILIYnpqltlvtfylySLTTAAIFFILnTTSILKLSTVMTA------------------WTKI 237
Cdd:COG1009 300 KRVLAYSTVSQLGYMFLALGV------------GAYVAALFHLL-THAFFKALLFLGAgsvihatgtrdirkmgglRKKM 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1953441022 238 PSLTTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALL--SLLGLFFYLRLAY 298
Cdd:COG1009 367 PITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALlgAFLTAFYSFRLFF 429
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-287 |
5.63e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 60.50 E-value: 5.63e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 33 LEINTLAILPLIS-KAHHPRAIEAATKYFLIQATASTLLLFS---------SMTNAWSTGQWDITQFTHPMSC-VLLTIA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIAlALFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 102 ISMKLGLVPFHFW----FPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAPSLNPT----LLSMMAIASAALGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWlpdaYPAAPSSISAMLLVIKQAGLYALARVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 174 QIRKILAFSSISHLGWM------AIILIYNPQLTLVTFY-----------------LYSLTTAAIFFILNTTSILKLSTV 230
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMllglgvGLAALGDPAMASYGEIalaggiyhivnhalykaLLFLTAGAVIYETGTRNLNELGGL 389
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1953441022 231 MtawTKIPSLTTILMLSLLSLAGLPPLTGFLPKWLIIQE--LTKQELTAIATMIALLSL 287
Cdd:PRK08376 390 A---RTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESsaLFNPILGVIAMIGSVLTL 445
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
1.63e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 58.74 E-value: 1.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 33 LEINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLLFS-SMTNAwSTGQW---DITQFTHPMSCV-----LLTIAIS 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLnmaDLAGALAENPTVvtafgFVLLALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 104 MKLGLVPFHFWFPEVLQGSSLSTSLLLA-TVMKFPPTTLL------FLTAPSLNPTLLSM-MAIASAAL--GGWMGLNQT 173
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAAPPVVTALLSgLVTKVAVYALIriyftvFGGDFRFALGLGWLlAVLALLSMlvGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 174 QIRKILAFSSISHLGWMAIILIYNPQLTLV--TFYL--YSLTTAAIFF----ILNTTSILKLSTVMTAWTKIPSLTTILM 245
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLaagaIEVTYGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1953441022 246 LSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRLAY 298
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-298 |
4.66e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 57.70 E-value: 4.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 34 EINTLAILPLISKAHHpRAIEAATKYFLIQATASTLLLFSSMTNAWSTGQWDIT-------QFTHPMSCVLLTIAIS--- 103
Cdd:PRK08668 128 EIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTGFALIVFLFLLafg 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 104 -MKLGLVPFHFWFPE-----------VLQGSSLST-SLLLATVMKFPPTTLLFLT------APSLNPTLLSMMAIaSAAL 164
Cdd:PRK08668 207 vAKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLgAYGFLLVLYVLPGTKLFSEfgtyrgVPLFNYILAWLGNI-SIIV 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 165 GGWMGLNQTQIRKILAFSSISHLGWMAIIL--------------IYNPQLTLVTFYLyslTTAAIFFILNTTSILKLSTV 230
Cdd:PRK08668 286 GTLMAILQEDIKKLIAYSSVANGGYILVGLglgtslgfagglfhVFNHALFKGLFFL---IFAAVIYRTGTTKISEMGGL 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1953441022 231 mtAWtKIPSLTTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRLAY 298
Cdd:PRK08668 363 --IE-KMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-292 |
7.52e-09 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 56.86 E-value: 7.52e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 20 TISSNHWMMAWTGLEINTLAILPLISKAHHPRAIEAATKYFLI------QATASTLLLFSSMTNAWSTGQwDITQFTHPM 93
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIIcsvgvaFALFGTILVYANAATVMGDGE-MAILWTELL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 94 SC-------------VLLTIAISMKLGLVPFHFWFPE-----------VLQGSSLSTSLLLatVMKFpptTLLFLTAPSL 149
Cdd:PRK06458 203 KHaslldptlmklafVFLLIGFGTKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYA--VLRY---YILIDAAIGS 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 150 NP--TLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMAIIL-------IYNPQLTLVTfylYSLTTAAIFF--- 217
Cdd:PRK06458 278 DFpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALgiggplgIFAALLHMLN---HSLTKSAIFFasg 354
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1953441022 218 -ILNTTSILKLSTVMTAWTKIPSLTTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELtaIATMIALLSLLGLFF 292
Cdd:PRK06458 355 nVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGP--LLIAILLLLLLTLAF 428
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
96-263 |
1.59e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 56.09 E-value: 1.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 96 VLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVM---------KFPPTtllFLTAPSLNPTLLSMmAIASAALGG 166
Cdd:PRK12644 207 VLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG---FADVPVWRPTVLVL-GLATMLLGG 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 167 WMGLNQTQIRKILAFSSISHLGWMAIILIYNPQ------LTLVTfyLYSLTTAAIFFIL-------NTTSILKLSTVmta 233
Cdd:PRK12644 283 WRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAMLL--AHALFKAALFLVVgiidhstGTRDIRKLSGL--- 357
|
170 180 190
....*....|....*....|....*....|
gi 1953441022 234 WTKIPSLTTILMLSLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 358 GRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
34-298 |
8.55e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 53.42 E-value: 8.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 34 EINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLL---------FSSMTNAWSTGQWDITQFTHPMSCV--LLTIAI 102
Cdd:PRK12663 138 EVMLIASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLlgigllygtFGTLNMAHIAMRLNDMGDTATLTTIalLFLLAF 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 103 SMKLGLVPFhFWFPEVLQGSSLSTSLLLATVMK-------FPPTTLLFLTAPSLNPTLLSMMAIASAALGGWMGLNQTQI 175
Cdd:PRK12663 218 GMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDI 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 176 RKILAFSSISHLGWM-AIILIYNPQ-LTLVTFYLYS--LTTAAIFFILNTTSIL----KLSTVMTAWTKIPSLTTILMLS 247
Cdd:PRK12663 297 RRIAGYQVISSIGFIlLGLALGTPAgINGAIFYLVHdmVVKTALFLIAGSLVRLtgyrSLQYLGGLYRKEPLFGALFLIL 376
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1953441022 248 LLSLAGLPPLTGFLPKWLIIQ-ELTKQELTAIATMIA--LLSLLGLFFYLRLAY 298
Cdd:PRK12663 377 IFAIGGLPPFSGFWGKVLLVQgALDNGAYILLALMLItsLITMYSLFRIFFLAY 430
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
96-304 |
2.81e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 52.35 E-value: 2.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 96 VLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMKFPPTTLL--FLTAPSLNPT---LLSMMAIASAALGGWMGL 170
Cdd:PRK12650 212 VLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLlrFSPVFHDVAVwnwLLIIVGMITALMGAVFAV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 171 NQTQIRKILAFSSISHLGWM-AIILIYNP-QLT--LVTFYLYSLTTAAIFFIL-------NTTSILKLSTVmtaWTKIPS 239
Cdd:PRK12650 292 QKTDLKKLTAYSTVSQLGWIvATIGVGTPfALTaaVVHTLAHALFKSSLFMLIgvvdhqaGTRDIRRLGSL---WRRMPF 368
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1953441022 240 LTTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAiATMIALLSLLGLFFYLRLAYCTTITL 304
Cdd:PRK12650 369 TFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGN-AGVVLLLVGAALGAVFTFAYSARLVL 432
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-298 |
5.84e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 50.80 E-value: 5.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 34 EINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWSTGQWDITQFTHPM-----------SCVLLTIAI 102
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALlvnptspviygGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 103 SMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMKFPPTTL------LFLTAPSLNPTLLSMMAIASAA--LGGWMGLNQTQ 174
Cdd:PRK06277 210 LYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALmlvifkLFGGLSYFPSAQGVLIALSVLAmvFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 175 IRKILAFSSISHLGWMAIILIYNPQLTLVTFYLYS----LTTAAIFF----ILNTTSILKLSTVMTAWTKIPSLTTILML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLgagiVSYRTKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1953441022 247 SLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRLAY 298
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY 421
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-296 |
5.99e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 51.10 E-value: 5.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 96 VLLTIAISMKLGLVPFHFWFPE----------VLQGSSLSTSLLLATVMKFpptTLLFLTAPSLNPTLLSMMAIASAALG 165
Cdd:PRK07691 213 ILFLFVFATKAGLFPLYFWLPGsyyappiaiaALFGALLTKVGVYAIARTF---TLFFSHDTSFTHYLILILALLTIIFG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 166 GWMGLNQTQIRKILAFSSISHLGWMAI-ILIYNPQ-LTLVTFYLYS--LTTAAIFF-------ILNTTSILKLSTVMTAW 234
Cdd:PRK07691 290 VIGAVAYFDIKKIIIYNIMIAVGVILVgVAMMTESgMIGAIYYLIHdmIVKAALFLligimikITGTTDLKKMGGLIKRY 369
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1953441022 235 tkiPSLTTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFYLRL 296
Cdd:PRK07691 370 ---PVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
9.57e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 50.60 E-value: 9.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 48 HHPRAIEAATKYFLIQATASTLLLFSSMTNAWSTGQWDITQFTHP--------------MSCVLLTIAISMKLGLVPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDselienikghplflITLILIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 114 WFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAPSLNPT-----LLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 189 WMAIILIYNPQ------LTLVTFYLYSLTT--AAIFFILN-------TTSILKLSTVMTawtKIPSLTTILMLSLLSLAG 253
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLLNHATfkACLFLVAGivaheaaTRDIRKLGGLRK---EMPITFIVASIAALAMAG 392
|
250
....*....|
gi 1953441022 254 LPPLTGFLPK 263
Cdd:PRK12649 393 IPPLNGFLSK 402
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-305 |
1.48e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 49.69 E-value: 1.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 95 CVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAPSLNPTLLSMMAIA-----SAALGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTivgslTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 170 LNQTQIRKILAFSSISHLGWMAIILiynpQLTLVTFYLYSLTTAAIF---FILNTTSILKLST------VMTAWTKIPSL 240
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVAC----GLSHYSISLFHLMNHAFFkalLFLSAGSVIHALSdeqdmrKMGGLISFLPL 368
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1953441022 241 TTILML-SLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLS-LLGLFFYLRLAYCTTITLP 305
Cdd:MTH00020 369 TYIFFLiGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIYLTFLSNT 435
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
100-268 |
1.70e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 49.57 E-value: 1.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 100 IAISMKLGLvpfHFWFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAPSLNPTLLSMMAIA-----SAALGGWMGLNQTQ 174
Cdd:MTH00032 236 IGKSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITifgalTAFFAATVGLVQND 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 175 IRKILAFSSISHLGWMAIILIYNPQLTLVTFYLYSLTTAAIFFILNTTSILKLSTVMTAWTK--------IPSLTTILML 246
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMVLIIGIEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVDEQDMRkmgglihsIPFTYTMMLI 392
|
170 180
....*....|....*....|..
gi 1953441022 247 SLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 393 GSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
164-286 |
3.26e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 49.03 E-value: 3.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 164 LGGWMGLNQTQIRKILAFSSISHLGWMAIILIYNPQLTLVtfylyslttAAIFFILNtTSILKLSTVMTA---------- 233
Cdd:PRK12648 284 LGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAAV---------AAIFHIIN-HATFKASLFMAAgiidhetgtr 353
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1953441022 234 --------WTKIPSLTTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQE--------LTAIATMIALLS 286
Cdd:PRK12648 354 dmrrlsglRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFAETLDTHllgsldwlLPVAATLAGAFS 422
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-267 |
4.22e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 48.19 E-value: 4.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 33 LEINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLLFS-----SMTNAWSTGqwDITQFTHPM--------SCVLLT 99
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyAITGTLNMG--DMFLIIQDLptnraiqiGVLFIM 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 100 IAISMKLGLVPFHFW----FPEVLQGSSLSTSLLLATVMKFPPTTL--------LFLTAPSLNPTLLSMMAIAsAALGGW 167
Cdd:PRK12662 217 VGLFIKAALFPFHKWliqaYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkanFVFTTLPFNNVFMILAALA-IVFGSV 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 168 MGLNQTQIRKILAFSSISHLGWMAIILIYNPQLTLVTFYLY----SLTTAAIFFILNTTSI----LKLSTVMTAWTKIPS 239
Cdd:PRK12662 296 LAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSISYhfgtTKLEDCLNLWKSMPK 375
|
250 260
....*....|....*....|....*...
gi 1953441022 240 LTTILMLSLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 376 ITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-285 |
1.10e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 46.89 E-value: 1.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 33 LEINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWSTGQWDIT------QFTHPMSCVLLTIAISMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSalsglhGSLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 107 GLVPFHFWFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAPSLNP------TLLSMMAIASAALGGWMGLNQTQIRKILA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 181 FSSISHLGWMAIIL---IYNPQLTLV--TFYLYS---------LTTAAIFFILNTTSILKLSTVMtawTKIPSLTTILML 246
Cdd:PRK06525 302 YSTITQLGYMFFGLslaILGSRLALEgsIAYIFNhafakslffLVAGALSYSCGTRLLPRLRGVL---KKLPLVGVGFCV 378
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1953441022 247 SLLSLAGLPPLTGFLPKWLIIQ---ELTKQELTAIATMIALL 285
Cdd:PRK06525 379 AALAITGVPPFNGFFSKFPIFAagfELSVEYWILLPAMVLLL 420
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
43-267 |
1.71e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 46.35 E-value: 1.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 43 LISKAHHPRAIEAATKYFLIQATASTLLLFSSMT----NAWSTGQWDITQF-THPMSCVLLT-------IAISMKLGLVP 110
Cdd:PRK05846 150 LIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIYlvvvYYNATGTFDIADLlNLPLPPGVQYwlflaffIAFAVKMPMFP 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 111 FHFWFPEV-LQGSSLSTSLLLATVMK-------------FPPTTLLFLTapslnptLLSMMAIASAALGGWMGLNQTQIR 176
Cdd:PRK05846 230 LHTWLPDAhVQAPTAGSVLLAGILLKmgaygllrfslplFPDASHEFAP-------IIITLGVIAIIYGALVALAQTDIK 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 177 KILAFSSISHLGWMAI-ILIYNPQ-LTLVTFYLYS--LTTAAIFFI-------LNTTSILKLSTVmtaWTKIPSLTTILM 245
Cdd:PRK05846 303 KLIAYSSISHMGFVTLgIFAGNQLgIQGAIFQMIShgLSSAALFLLvgvlydrLHTRDIADYGGL---AKVMPVLAAFFL 379
|
250 260
....*....|....*....|..
gi 1953441022 246 LSLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK05846 380 FFAMASLGLPGTSGFVGEFLIL 401
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-286 |
1.78e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 46.45 E-value: 1.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 109 VPFHFWFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAPSLNPT-----LLSMMAIASAALGGWMGLNQTQIRKILAFSS 183
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYST 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 184 ISHLGWMAIILIYNPQLTLVTFYLY----SLTTAAIFFIL-------NTTSILKLSTVmtaWTKIPSLTTILMLSLLSLA 252
Cdd:PRK12647 292 VSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAgiidhetGTRDITKLGGL---RRAMPITAAAALLAALSMA 368
|
170 180 190
....*....|....*....|....*....|....*
gi 1953441022 253 GLPPLTGFLPKWLIIQELTKQELTAIA-TMIALLS 286
Cdd:PRK12647 369 GLPPLFGFLAKELIYEALLEAPLWSLIlTVAAVLG 403
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-291 |
2.51e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 45.90 E-value: 2.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 13 LLLGTTITISSNHWMMAWTGLEINTLAILPLISKAHHPRAIEAATKYFLIQATA------STLLLFSSMTNAWSTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 87 TQFTHP----------MSCVLLTIAISMKLGLVPFHFWFPEV-LQGSSLSTSLLLATVMKFPPTTLLFLTA--------P 147
Cdd:PRK08676 191 TELAAHasllspsvlgASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaaE 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 148 SLNPTLLSMmAIASAALGGWMGLNQTQIRKILAFSSISHLGWMAI-ILIYNPQL---TLVTFYLYSLTTAAIFFilnTTS 223
Cdd:PRK08676 271 QFSNVLIGL-GIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLgIGIGTPLAlfwMLFHMLAHSLVKSGLFF---SAG 346
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1953441022 224 ILKLSTVMTAWTKI-------PSLTTILMLSLLSLAGLPPLTGFLPKWLIIqeltkQELTAIATMIALLSLLGLF 291
Cdd:PRK08676 347 ILHRQYRSDRFDRIfdvfrlqPVAAWGVILGSAAIIGMPPFPLFLSKFFIL-----LQLGGISVWLVLAVLLLLL 416
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
96-293 |
1.17e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 43.98 E-value: 1.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 96 VLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAPSLNPT-----LLSMMAIASAALGGWMGL 170
Cdd:PRK12646 214 FMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITAL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 171 NQTQIRKILAFSSISHLGWMAII------LIYNPQLTLVTFYLYSLTtAAIFFILNTtSILKLSTVM-------TAWTK- 236
Cdd:PRK12646 294 KQWDLKGILAYSTISQLGMIMAMvgigggYAQHQQDAIASIYVFVLF-AALFHLMNH-AIFKCALFMgvgiidhEAGTRd 371
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1953441022 237 ----------IPSLTTILMLSLLSLAGLPPLTGFLPKWLIIQELTK--------QELTAIATMIALLSLLGLFFY 293
Cdd:PRK12646 372 irilsgmrqlFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgqlsqfsLISMIIIVFIGVIASIFTFTY 446
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
171-263 |
2.93e-04 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 42.60 E-value: 2.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 171 NQTQIRKILAFSSISHLGW-MAIILI----YNPQLTLVTFYlYSLTTAAIFFILN--------------------TTSIL 225
Cdd:PRK12645 294 KQTDLKGILAFSTVSQLGLiMSLLGIgaasLHYQGDDSKIY-AAAITAAIFHLINhatfkgslfmivgivdhetgTRDIR 372
|
90 100 110
....*....|....*....|....*....|....*...
gi 1953441022 226 KLSTVMTAwtkIPSLTTILMLSLLSLAGLPPLTGFLPK 263
Cdd:PRK12645 373 KLGGLMTI---MPITFTIALIGALSMAGLPPFNGFLSK 407
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-293 |
4.41e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 41.94 E-value: 4.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 55 AATKYFLIQATASTLLLFSSMTNAWSTGQ--WDITQFTH---PMSCVLLT-----IAISMKLGLVPFHFWFPEVLQGSSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 125 STSLLLATVM--------------KFPPTTLLFltAPslnptLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:PRK12561 218 PVSMILAGVLlkmggyalirfnvqMLPDAHVYF--AP-----ALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 191 AI-------ILIYNPQLTLVTfylYSLTTAAIFFI-------LNTTSILKLSTVMTAWTKIPSLTTIlmLSLLSLAgLPP 256
Cdd:PRK12561 291 LLgiaaftdLGISGAMLQMIS---HGLIAAALFFLtgvtyerTHTLSIPNMGGLAKVMPKTFALFTA--SSMASLA-LPG 364
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1953441022 257 LTGFLPKWLIIQELTKQE------------LTAIA---TMIALLSLLGLFFY 293
Cdd:PRK12561 365 MSGFVSELTVFLGITSSDvysstfrtitilLAAVGlilTPIYLLSMLRRVFY 416
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-270 |
4.44e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.08 E-value: 4.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 15 LGTTITISSNHWMM---AWTGLEINTLAILPLISKAHHPRAIeaatkyFLIQATASTLLLFSSMTNAWS-TGQWDITQFT 90
Cdd:PRK06459 83 LGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiSGTTNFSYLP 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 91 HPMSCVLLTIAISMKLGLVPFHF--WFPEVLQGSSLSTSLLLATVMK----FPPTTLLFLTAPS----LNPTLLSMMAIa 160
Cdd:PRK06459 157 SPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTlmgvYGILKMTILTQTIpigyFGLTILAIGAF- 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 161 SAALGGWMGLNQTQIRKILAFSSISHLGWM-----AIILIYNPQLTLVTFYLYSLTTAAIFFILNTTSI------LKLST 229
Cdd:PRK06459 236 SILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILYSFAHSVAKTGLflssglQEKQS 315
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1953441022 230 VMTAWTKIPSLTTI-LMLSLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 316 ITYSKKIRNRWIELgLTLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
95-303 |
5.58e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 41.53 E-value: 5.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 95 CVLL---TIAISMKLGLvpfHFWFPEVLQGSSLSTSLLLATVMKFPPTTLLFLTAP-----SLNPTLLSMMAIASAALGG 166
Cdd:MTH00210 214 CLLLfigAVGKSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPlfegsPLALTIVTILGALTAFFAA 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 167 WMGLNQTQIRKILAFSSISHLGWMAIILiynpQLTLVTFYLYSLTTAAIF----FILNTTSILKLST-----VMTAWTK- 236
Cdd:MTH00210 291 TVGVVQNDLKKVIAYSTCSQLGYMVMVC----GISNYSTSLFHLMNHAFFkallFLSAGSVIHAVSDeqdmrKMGGLIKs 366
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1953441022 237 IPSLTTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLS-LLGLFFYLRLAYCTTIT 303
Cdd:MTH00210 367 IPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSaLLTAFYSIRLIYLTFIT 434
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
100-267 |
5.76e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.45 E-value: 5.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 100 IAISMKLGLVPFHFWFPEV-LQGSSLSTSLLLATVMKFPPTTLLFLTAP-------SLNPTLLSmMAIASAALGGWMGLN 171
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPilplgaqNLAPAVIA-MGIVGIVYGSFATCR 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 172 QTQIRKILAFSSISHLGWMAIILIYNPQLTL---VTFYLYSLTTAAIFFILNTTSILKLSTVMTAWTK-----IPSLTTI 243
Cdd:MTH00226 317 QIDVKRLVAYSSVAHMGLVSITLVTHDIIGLtgsIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRglsitMPIWGTI 396
|
170 180
....*....|....*....|....
gi 1953441022 244 LMLSLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 397 MIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
96-268 |
6.94e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 41.24 E-value: 6.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 96 VLLTIAISMKLGLVPFHFWFPEvlqgsslstslllATVMKFPPTTLL--------------------FLTAPSLNPTLLS 155
Cdd:PRK07363 209 TGLLLGFGIKIPLVPLHTWLPD-------------AYTEASPAVAILlggvlaklgtygllrfglqlFPQTWSLVAPGLA 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 156 MMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMAIILIYNPQLTLVTFYLYSLTTAAIFFIL-----------NTTSI 224
Cdd:PRK07363 276 IIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLfhlvgiverkvGTRDL 355
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1953441022 225 LKLSTVMTAWTKIPSLTTILMLSLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07363 356 DVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-291 |
1.26e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 40.48 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 55 AATKYFLIQATASTLLLFSSMTNAWSTGQWDITQFTHP-----MSCVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLL 129
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASagilsLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 130 LATVM-KFPPTTLLFLTAPSLNP-----TLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMAI-ILIYnpqltl 202
Cdd:PRK08667 243 MSGVMlKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMgIGLY------ 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 203 VTFYLYSLTT-------AAIFFILNTT---SILKL---STVMTAWTK-----------IPSLTTILMLSLLSLAGLPPLT 258
Cdd:PRK08667 317 VIFGVYGLDTlallalgGALFHSLNHAlfkSLLFLtagSVVHATGTRniekmgglvklMPYTSALFLVGAVSIAALPPFN 396
|
250 260 270
....*....|....*....|....*....|....
gi 1953441022 259 GFLPKWLIIQELTKQ-ELTAIATMIALLSLLGLF 291
Cdd:PRK08667 397 GFASELLLYESFFQSfSVADPLIKILLFSVLAIF 430
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-268 |
1.64e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 40.34 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 96 VLLTIAISMKLGLVPFHFWFPE-----------VLQGSSLSTSLLLATVMKfpptTLLFlTAPSLNpTLLSMMAIASAAL 164
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDsyptapapvtaVFAGLLTKVGVYAIIRTH----TLLF-PGGGLD-TLLMVVALLTMVV 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 165 GGWMGLNQTQIRKILAFSSISHLGWMAI-ILIYNPQ-LTLVTFYL--YSLTTAAIFFIL-------NTTSILKLSTVMTA 233
Cdd:PRK12665 287 GILGAIAQSDIKRLLSFTLVSHIGYMVFgIALSTVAgLSGAIYYVahHITVQTTLFLVVglierqaGSSSLRRLGGLAKA 366
|
170 180 190
....*....|....*....|....*....|....*
gi 1953441022 234 wtkIPSLTTILMLSLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 367 ---SPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
1.68e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 40.07 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 55 AATKYFLIQATASTLLLFSSMTNAWSTGQWDI---TQFTH--PMSCVLL-----TIAISMKLGLVPFHFWFPEV-LQGSS 123
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGASSFdyePLRSHtlPLSTQLLllapiLVGFGIKIPLVPFHTWLPDAhVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 124 LSTSLLLATVMKFPPTTLL------FLTAPSLNPTLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWMAIILIYN 197
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAA 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 198 PQLTLV--TFYLYS--LTTAAIFFIL-------NTTSILKLSTVMTAWTKIPSLTTILMLSLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06473 318 TPLSILaaVFQMIShgLISALLFLLVgvvykktGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
12-284 |
1.74e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 40.18 E-value: 1.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 12 SLLLGTTITISSNHWMMaWTGLEINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWS-TGQWDITQ-- 88
Cdd:PRK06589 125 TILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTkTGNLDFVSgg 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 89 -FTHPMSCVLLTIAISM--KLGLVPFHFWFPEVLQGSSLSTSLLLATVM----KFPPTTLLFLTAPSLNPTLLSMM---- 157
Cdd:PRK06589 204 lFSKNQSIILLLMFIYGiaKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLQRIFAEfnwl 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 158 ---AIASAALGGWMGLNQTQIRKILAFSSISHLGW--MAIILIYNPQLTLVTFYL--YSLTTAAIFFILNTTSILK---- 226
Cdd:PRK06589 284 ifiPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLvsHSFAKICLFYSMGSIYSLKkedq 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1953441022 227 LSTVMTAWTKIPSLTTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIAL 284
Cdd:PRK06589 364 VDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
2.56e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 39.55 E-value: 2.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 33 LEINTLAILPLISKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWSTGQWDITQFTH--PMSCVLLTIAISMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 111 FHFWFP------EVLQGSSLSTSLLLATVMkfpPTTLLFLTAPSLNPtLLSMMAIASAALGGWMGLNQTQIRKILAFSSI 184
Cdd:PRK07234 203 SGLWLPlthseaEPPVSALLSGVVVKAGVF---PLVRCALDVPGLDL-IVRIFGVGTALLGVLFALLEKDLKRMLAFSTI 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 185 SHLGWMAIILIYNPQLTLVtfylYSLTTAAIFFI---LNTTSILKLSTVMTA-WTKIPslttiLMLSLLSLAGLPPLTGF 260
Cdd:PRK07234 279 SQLGFILAAPLVGGLYALA----HGLVKSTLFLCagaLPSRNFTELISQMLGiGKWIP-----LTMASFSIAGFPLLAGF 349
|
250
....*....|.
gi 1953441022 261 LPKWLIIQELT 271
Cdd:PRK07234 350 VSKVLTLKNLL 360
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
3.49e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 39.04 E-value: 3.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 107 GLVPFHFWFPEVLQGSSLSTSLLLATV-MKFPPTTLLFLTAPSLNPTL-----LSMMAIASAALGGWMGLNQTQIRKILA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 181 FSSISHLGWMAI--------ILIYNPQLTLVTFY--LYSLTT------------AAIFFILNTTSILKLSTVmtaWTKIP 238
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLVggLYHLLNhslfksvlflgaGSVWFRTGHRDIEKLGGI---GKKMP 351
|
170 180 190
....*....|....*....|....*....|....
gi 1953441022 239 SLTTILMLSLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK08042 352 VISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-322 |
3.95e-03 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 34.93 E-value: 3.95e-03
10 20 30
....*....|....*....|....*....|..
gi 1953441022 291 FFYLRLAYCTTITLPPNSANFMKQWRINKPVN 322
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKN 32
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
148-299 |
5.44e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 38.67 E-value: 5.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 148 SLNPTLLSMMAIASAA---LGGWMGLNQTQIRKILAFSSISHLGWMAIIL-IYNPQLTLvtFYLYS--LTTAAIF----- 216
Cdd:MTH00151 234 SSSSGFSSFLLFISLLtllMAGISACYENDLKKIIALSTLSQLGVMMFSLgLGMPSLAL--FHLYThaLFKALLFlcags 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 217 FILNTTS---ILKLSTVmtaWTKIPSLTTILMLSLLSLAGLPPLTGFLPKWLIIQELTKQELTAIATMIALLSLLGLFFY 293
Cdd:MTH00151 312 IIHSSSGtqdIRLLGSL---FLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALY 388
|
....*..
gi 1953441022 294 -LRLAYC 299
Cdd:MTH00151 389 sARLSFC 395
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
13-190 |
8.56e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 37.76 E-value: 8.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 13 LLLGTTITISSNHW---MMAW--TGLEINTLailpLISKAHHPRAIEAATKYFLIQATASTLLLFSSMTNAWSTGQWDIT 87
Cdd:PRK08168 109 VLAAVHLLVLSDHLlvlIAAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLS 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1953441022 88 QF-----THPMS------CVLLTIAISMKLGLVPFHFWFPEVLQGSSLSTSLLLATV--------MKFPPttLLFLTAPS 148
Cdd:PRK08168 185 ALwahlaAQGASpslqaaALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVvnlggfvlIRFAP--LLEQAPPA 262
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1953441022 149 LnpTLLSMMAIASAALGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:PRK08168 263 R--WLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFM 302
|
|
| |
