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Conserved domains on  [gi|1994014906|gb|QSB57610|]
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L-ribulose-5-phosphate 4-epimerase [Klebsiella aerogenes]

Protein Classification

L-ribulose-5-phosphate 4-epimerase( domain architecture ID 10013011)

L-ribulose-5-phosphate 4-epimerase catalyzes the formation of D-xylulose 5-phosphate from L-ribulose 5-phosphate

CATH:  3.40.225.10
EC:  5.1.3.4
PubMed:  11732895
SCOP:  4000777

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
araD PRK08193
L-ribulose-5-phosphate 4-epimerase AraD;
1-231 0e+00

L-ribulose-5-phosphate 4-epimerase AraD;


:

Pssm-ID: 236181  Cd Length: 231  Bit Score: 500.90  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   1 MLEDLKRQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDtGEVVEGNKKPSSDTPTH 80
Cdd:PRK08193    1 MLEDLKQEVLEANLALPKHGLVTFTWGNVSAIDRERGLFVIKPSGVDYDKMTAEDMVVVDLE-GNVVEGKLKPSSDTPTH 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  81 RLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGEYEWETGNVIVETFRQQGIDP 160
Cdd:PRK08193   80 LVLYKAFPEIGGIVHTHSRHATAWAQAGRDIPALGTTHADYFYGDIPCTRKMTDEEINGEYEWETGKVIVETFEKRGIDP 159
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1994014906 161 AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ 231
Cdd:PRK08193  160 AAVPGVLVHSHGPFTWGKDAEDAVHNAVVLEEVAKMAYFTRQLNPQLPDMQQTLLDKHYLRKHGKNAYYGQ 230
 
Name Accession Description Interval E-value
araD PRK08193
L-ribulose-5-phosphate 4-epimerase AraD;
1-231 0e+00

L-ribulose-5-phosphate 4-epimerase AraD;


Pssm-ID: 236181  Cd Length: 231  Bit Score: 500.90  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   1 MLEDLKRQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDtGEVVEGNKKPSSDTPTH 80
Cdd:PRK08193    1 MLEDLKQEVLEANLALPKHGLVTFTWGNVSAIDRERGLFVIKPSGVDYDKMTAEDMVVVDLE-GNVVEGKLKPSSDTPTH 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  81 RLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGEYEWETGNVIVETFRQQGIDP 160
Cdd:PRK08193   80 LVLYKAFPEIGGIVHTHSRHATAWAQAGRDIPALGTTHADYFYGDIPCTRKMTDEEINGEYEWETGKVIVETFEKRGIDP 159
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1994014906 161 AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ 231
Cdd:PRK08193  160 AAVPGVLVHSHGPFTWGKDAEDAVHNAVVLEEVAKMAYFTRQLNPQLPDMQQTLLDKHYLRKHGKNAYYGQ 230
araD TIGR00760
L-ribulose-5-phosphate 4-epimerase; E. coli has two genes, sgaE and sgbE (YiaS), that are very ...
1-231 9.86e-168

L-ribulose-5-phosphate 4-epimerase; E. coli has two genes, sgaE and sgbE (YiaS), that are very close homologs of araD, the established L-ribulose-5-phosphate 4-epimerase of E. coli. SgbE, part of an operon for L-xylulose metabolism, also has L-ribulose-5-phosphate 4-epimerase activity; L-xylulose-5-phosphate may be converted into L-ribulose-5-phosphate by another product of that operon. The homolog to this family from Mycobacterium smegmatis is flanked by putative araB and araA genes, consistent with it also being araD. [Energy metabolism, Sugars]


Pssm-ID: 129843  Cd Length: 231  Bit Score: 461.22  E-value: 9.86e-168
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   1 MLEDLKRQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDTGEVVEGNKKPSSDTPTH 80
Cdd:TIGR00760   1 MLEQLKKEVLEANLALPKHQLVTFTWGNVSAIDRERGLVVIKPSGVEYDVMTADDMVVVDLETGNVVEGSKKPSSDTPTH 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  81 RLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGEYEWETGNVIVETFRQQGIDP 160
Cdd:TIGR00760  81 LALYRAFPSIGGIVHTHSRHATIWAQAGKDIPALGTTHADYFYGTIPCTRPMTDEEINGEYELETGKVIVETFEKRGIDP 160
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1994014906 161 AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ 231
Cdd:TIGR00760 161 AQIPGVLVHSHGPFAWGKDAANAVHNAVVLEEVAYMALFSRQLNPQLPPMQQTLLDKHYLRKHGANAYYGQ 231
Aldolase_II cd00398
Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes ...
3-223 6.08e-94

Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.


Pssm-ID: 238232 [Multi-domain]  Cd Length: 209  Bit Score: 273.86  E-value: 6.08e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   3 EDLKRQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDtGEVVEGnKKPSSDTPTHRL 82
Cdd:cd00398     1 EKLKRKIIAACLLLDLYGWVTGTGGNVSARDRDRGYFLITPSGVDYEEMTASDLVVVDAQ-GKVVEG-KKPSSETPLHLA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  83 LYQAFPTLGGIVHTHSRHATIWAQAGQ-SIPATGTTHADYFYGPVPCTRLMTDaeingeyewETGNVIVETFRQQGIdpA 161
Cdd:cd00398    79 LYRARPDIGCIVHTHSTHATAVSQLKEgLIPAGHTACAVYFTGDIPCTPYMTP---------ETGEDEIGTQRALGF--P 147
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1994014906 162 QMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPDMQQTLLDKHYLRKH 223
Cdd:cd00398   148 NSKAVLLRNHGLFAWGPTLDEAFHLAVVLEVAAEIQLKALSMGGQLPPISLELLNKEYLRKH 209
AraD COG0235
5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar ...
1-224 1.64e-70

5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar degradation) [Amino acid transport and metabolism, Carbohydrate transport and metabolism]; 5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar degradation) is part of the Pathway/BioSystem: Urea cycle


Pssm-ID: 440005 [Multi-domain]  Cd Length: 208  Bit Score: 214.31  E-value: 1.64e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   1 MLEDLKRQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLvIKPSGVDYGLMTADDMVVVSLDtGEVVEGNKKPSSDTPTH 80
Cdd:COG0235     2 EEEELREELAAAGRRLARRGLVDGTAGNISVRLDDDRFL-ITPSGVDFGELTPEDLVVVDLD-GNVVEGDLKPSSETPLH 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  81 RLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMT--DAEIngeyewetGNVIVETFRqqgi 158
Cdd:COG0235    80 LAIYRARPDVGAVVHTHSPYATALSALGEPLPPLEQTEAAAFLGDVPVVPYAGpgTEEL--------AEAIAEALG---- 147
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1994014906 159 dpaQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPdMQQTLLDKHYlRKHG 224
Cdd:COG0235   148 ---DRPAVLLRNHGVVVWGKDLAEAFDRAEVLEEAARIQLLALALGGPLV-LSDEEIDKLA-RKFG 208
Aldolase_II smart01007
Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and ...
9-196 2.27e-63

Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.


Pssm-ID: 214970 [Multi-domain]  Cd Length: 185  Bit Score: 195.55  E-value: 2.27e-63
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906    9 VLEANLALPQHNLVTLTWGNVSAVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDTGEVVEGN-KKPSSDTPTHRLLYQAF 87
Cdd:smart01007   1 LAAACRLLARRGLVEGTGGNISARVGEEDLFLITPSGVDFGELTASDLVVVDLDGNVVEGGGgPKPSSETPLHLAIYRAR 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   88 PTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGP-VPCTRLMTDAEINGEYEWETGNVIVETFRqqgidpaQMPGV 166
Cdd:smart01007  81 PDVGAVVHTHSPYATALAALGKPLPLLPTEQAAAFLGGeIPYAPYAGPGTELAEEGAELAEALAEALP-------DRPAV 153
                          170       180       190
                   ....*....|....*....|....*....|
gi 1994014906  167 LVHSHGPFAWGKNAEDAVHNAIVLEEIAYM 196
Cdd:smart01007 154 LLRNHGLLVWGKTLEEAFDLAEELEEAAEI 183
Aldolase_II pfam00596
Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and ...
7-196 4.42e-63

Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.


Pssm-ID: 459862 [Multi-domain]  Cd Length: 178  Bit Score: 194.30  E-value: 4.42e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   7 RQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLvIKPSGVDYGLMTADDMVVVSLDtGEVVEGNKKPSSDTPTHRLLYQA 86
Cdd:pfam00596   1 EELAAAGRLLARRGLVEGTGGNISVRLPGDGFL-ITPSGVDFGELTPEDLVVVDLD-GNVVEGGLKPSSETPLHLAIYRA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  87 FPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEIngeyewETGNVIVETFRqqgidpAQMPGV 166
Cdd:pfam00596  79 RPDAGAVVHTHSPYATALSLAKEGLPPITQEAADFLGGDIPIIPYYTPGTE------ELGERIAEALG------GDRKAV 146
                         170       180       190
                  ....*....|....*....|....*....|
gi 1994014906 167 LVHSHGPFAWGKNAEDAVHNAIVLEEIAYM 196
Cdd:pfam00596 147 LLRNHGLLVWGKTLEEAFYLAEELERAAEI 176
 
Name Accession Description Interval E-value
araD PRK08193
L-ribulose-5-phosphate 4-epimerase AraD;
1-231 0e+00

L-ribulose-5-phosphate 4-epimerase AraD;


Pssm-ID: 236181  Cd Length: 231  Bit Score: 500.90  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   1 MLEDLKRQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDtGEVVEGNKKPSSDTPTH 80
Cdd:PRK08193    1 MLEDLKQEVLEANLALPKHGLVTFTWGNVSAIDRERGLFVIKPSGVDYDKMTAEDMVVVDLE-GNVVEGKLKPSSDTPTH 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  81 RLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGEYEWETGNVIVETFRQQGIDP 160
Cdd:PRK08193   80 LVLYKAFPEIGGIVHTHSRHATAWAQAGRDIPALGTTHADYFYGDIPCTRKMTDEEINGEYEWETGKVIVETFEKRGIDP 159
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1994014906 161 AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ 231
Cdd:PRK08193  160 AAVPGVLVHSHGPFTWGKDAEDAVHNAVVLEEVAKMAYFTRQLNPQLPDMQQTLLDKHYLRKHGKNAYYGQ 230
araD TIGR00760
L-ribulose-5-phosphate 4-epimerase; E. coli has two genes, sgaE and sgbE (YiaS), that are very ...
1-231 9.86e-168

L-ribulose-5-phosphate 4-epimerase; E. coli has two genes, sgaE and sgbE (YiaS), that are very close homologs of araD, the established L-ribulose-5-phosphate 4-epimerase of E. coli. SgbE, part of an operon for L-xylulose metabolism, also has L-ribulose-5-phosphate 4-epimerase activity; L-xylulose-5-phosphate may be converted into L-ribulose-5-phosphate by another product of that operon. The homolog to this family from Mycobacterium smegmatis is flanked by putative araB and araA genes, consistent with it also being araD. [Energy metabolism, Sugars]


Pssm-ID: 129843  Cd Length: 231  Bit Score: 461.22  E-value: 9.86e-168
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   1 MLEDLKRQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDTGEVVEGNKKPSSDTPTH 80
Cdd:TIGR00760   1 MLEQLKKEVLEANLALPKHQLVTFTWGNVSAIDRERGLVVIKPSGVEYDVMTADDMVVVDLETGNVVEGSKKPSSDTPTH 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  81 RLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGEYEWETGNVIVETFRQQGIDP 160
Cdd:TIGR00760  81 LALYRAFPSIGGIVHTHSRHATIWAQAGKDIPALGTTHADYFYGTIPCTRPMTDEEINGEYELETGKVIVETFEKRGIDP 160
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1994014906 161 AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ 231
Cdd:TIGR00760 161 AQIPGVLVHSHGPFAWGKDAANAVHNAVVLEEVAYMALFSRQLNPQLPPMQQTLLDKHYLRKHGANAYYGQ 231
sgbE PRK12347
L-ribulose-5-phosphate 4-epimerase; Reviewed
1-231 8.96e-161

L-ribulose-5-phosphate 4-epimerase; Reviewed


Pssm-ID: 183459  Cd Length: 231  Bit Score: 443.88  E-value: 8.96e-161
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   1 MLEDLKRQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDTGEVVEGNKKPSSDTPTH 80
Cdd:PRK12347    1 MLEQLKADVLAANLALPAHHLVTFTWGNVSAVDETRQLMVIKPSGVEYDVMTADDMVVVEIASGKVVEGSKKPSSDTPTH 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  81 RLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGEYEWETGNVIVETFRQQGIDP 160
Cdd:PRK12347   81 LALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGAIPCTRLMTAEEINGEYEYQTGEVIIETFEERGISP 160
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1994014906 161 AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ 231
Cdd:PRK12347  161 AQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELLDKHYLRKHGANAYYGQ 231
araD PRK13213
L-ribulose-5-phosphate 4-epimerase; Reviewed
1-231 5.36e-133

L-ribulose-5-phosphate 4-epimerase; Reviewed


Pssm-ID: 106181  Cd Length: 231  Bit Score: 373.68  E-value: 5.36e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   1 MLEDLKRQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDTGEVVEGNKKPSSDTPTH 80
Cdd:PRK13213    1 MLEQLKQQVFEANLALPKYKLVTFTWGNVSGIDREHGLVVIKPSGVEYDVMSVNDMVVVDLATGKVVEGDKKPSSDTDTH 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  81 RLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGEYEWETGNVIVETFRQQGIDP 160
Cdd:PRK13213   81 LVLYRAFAEIGGIVHTHSRHATIWAQAGKSLSALGTTHADYFYGPIPCTRLMTEAEITGDYEHETGKVIVETFAEQGLRA 160
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1994014906 161 AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ 231
Cdd:PRK13213  161 ADIPAVLVNGHGPFAWGSNAANAVHNAVVLEEIAYMNLFTHQLTPGVGDMQQTLLDKHYLRKHGAAAYYGQ 231
sgaE PRK12348
L-ribulose-5-phosphate 4-epimerase; Reviewed
2-231 7.09e-128

L-ribulose-5-phosphate 4-epimerase; Reviewed


Pssm-ID: 183460  Cd Length: 228  Bit Score: 360.66  E-value: 7.09e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   2 LEDLKRQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDtGEVVEGNKKPSSDTPTHR 81
Cdd:PRK12348    1 MQKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSGVAYETMKADDMVVVDMS-GKVVEGEYRPSSDTATHL 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  82 LLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGEYEWETGNVIVETFRQqgIDPA 161
Cdd:PRK12348   80 ELYRRYPSLGGIVHTHSTHATAWAQAGLAIPALGTTHADYFFGDIPCTRGLSEEEVQGEYELNTGKVIIETLGN--AEPL 157
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906 162 QMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ 231
Cdd:PRK12348  158 HTPGIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARGINPQLNHIDSYLMNKHFMRKHGPNAYYGQ 227
araD PRK13145
L-ribulose-5-phosphate 4-epimerase; Provisional
1-231 1.64e-118

L-ribulose-5-phosphate 4-epimerase; Provisional


Pssm-ID: 183870 [Multi-domain]  Cd Length: 234  Bit Score: 337.19  E-value: 1.64e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   1 MLEDLKRQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDtGEVVEGNKKPSSDTPTH 80
Cdd:PRK13145    2 NLQEMRERVCAANKSLPKHGLVKFTWGNVSEVCRELGRIVIKPSGVDYDELTPENMVVTDLD-GNVVEGDLNPSSDLPTH 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  81 RLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGEYEWETGNVIVETFRQQGIDP 160
Cdd:PRK13145   81 VELYKAWPEVGGIVHTHSTEAVGWAQAGRDIPFYGTTHADYFYGPIPCARSLTKDEVNGAYEKETGSVIIEEFEKRGLDP 160
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1994014906 161 AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ 231
Cdd:PRK13145  161 MAVPGIVVRNHGPFTWGKNPEQAVYHSVVLEEVAKMNRLTEQINPRVEPAPQYIMDKHYLRKHGPNAYYGQ 231
Aldolase_II cd00398
Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes ...
3-223 6.08e-94

Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.


Pssm-ID: 238232 [Multi-domain]  Cd Length: 209  Bit Score: 273.86  E-value: 6.08e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   3 EDLKRQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDtGEVVEGnKKPSSDTPTHRL 82
Cdd:cd00398     1 EKLKRKIIAACLLLDLYGWVTGTGGNVSARDRDRGYFLITPSGVDYEEMTASDLVVVDAQ-GKVVEG-KKPSSETPLHLA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  83 LYQAFPTLGGIVHTHSRHATIWAQAGQ-SIPATGTTHADYFYGPVPCTRLMTDaeingeyewETGNVIVETFRQQGIdpA 161
Cdd:cd00398    79 LYRARPDIGCIVHTHSTHATAVSQLKEgLIPAGHTACAVYFTGDIPCTPYMTP---------ETGEDEIGTQRALGF--P 147
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1994014906 162 QMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPDMQQTLLDKHYLRKH 223
Cdd:cd00398   148 NSKAVLLRNHGLFAWGPTLDEAFHLAVVLEVAAEIQLKALSMGGQLPPISLELLNKEYLRKH 209
AraD COG0235
5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar ...
1-224 1.64e-70

5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar degradation) [Amino acid transport and metabolism, Carbohydrate transport and metabolism]; 5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar degradation) is part of the Pathway/BioSystem: Urea cycle


Pssm-ID: 440005 [Multi-domain]  Cd Length: 208  Bit Score: 214.31  E-value: 1.64e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   1 MLEDLKRQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLvIKPSGVDYGLMTADDMVVVSLDtGEVVEGNKKPSSDTPTH 80
Cdd:COG0235     2 EEEELREELAAAGRRLARRGLVDGTAGNISVRLDDDRFL-ITPSGVDFGELTPEDLVVVDLD-GNVVEGDLKPSSETPLH 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  81 RLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMT--DAEIngeyewetGNVIVETFRqqgi 158
Cdd:COG0235    80 LAIYRARPDVGAVVHTHSPYATALSALGEPLPPLEQTEAAAFLGDVPVVPYAGpgTEEL--------AEAIAEALG---- 147
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1994014906 159 dpaQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPdMQQTLLDKHYlRKHG 224
Cdd:COG0235   148 ---DRPAVLLRNHGVVVWGKDLAEAFDRAEVLEEAARIQLLALALGGPLV-LSDEEIDKLA-RKFG 208
PRK06557 PRK06557
L-ribulose-5-phosphate 4-epimerase; Validated
1-231 1.60e-69

L-ribulose-5-phosphate 4-epimerase; Validated


Pssm-ID: 235829 [Multi-domain]  Cd Length: 221  Bit Score: 212.18  E-value: 1.60e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   1 MLEDLKRQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDtGEVVEGNKKPSSDTPTH 80
Cdd:PRK06557    7 MVEKLREEVCKLHLELPKYGLVVWTSGNVSARDPGTDLVVIKPSGVSYDDLTPEDMVVVDLD-GNVVEGDLKPSSDTASH 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  81 RLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLmtdAEINGEyewETGNVIVETfrqqgIDP 160
Cdd:PRK06557   86 LYVYRHMPDVGGVVHTHSTYATAWAARGEPIPCVLTAMADEFGGPIPVGPF---ALIGDE---AIGKGIVET-----LKG 154
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1994014906 161 AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPdMQQTLLDKHYLRKHGAkayYGQ 231
Cdd:PRK06557  155 GRSPAVLMQNHGVFTIGKDAEDAVKAAVMVEEVARTVHIARQLGEPIP-IPQEEIDRLYDRYQNV---YGQ 221
Aldolase_II smart01007
Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and ...
9-196 2.27e-63

Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.


Pssm-ID: 214970 [Multi-domain]  Cd Length: 185  Bit Score: 195.55  E-value: 2.27e-63
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906    9 VLEANLALPQHNLVTLTWGNVSAVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDTGEVVEGN-KKPSSDTPTHRLLYQAF 87
Cdd:smart01007   1 LAAACRLLARRGLVEGTGGNISARVGEEDLFLITPSGVDFGELTASDLVVVDLDGNVVEGGGgPKPSSETPLHLAIYRAR 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   88 PTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGP-VPCTRLMTDAEINGEYEWETGNVIVETFRqqgidpaQMPGV 166
Cdd:smart01007  81 PDVGAVVHTHSPYATALAALGKPLPLLPTEQAAAFLGGeIPYAPYAGPGTELAEEGAELAEALAEALP-------DRPAV 153
                          170       180       190
                   ....*....|....*....|....*....|
gi 1994014906  167 LVHSHGPFAWGKNAEDAVHNAIVLEEIAYM 196
Cdd:smart01007 154 LLRNHGLLVWGKTLEEAFDLAEELEEAAEI 183
Aldolase_II pfam00596
Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and ...
7-196 4.42e-63

Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.


Pssm-ID: 459862 [Multi-domain]  Cd Length: 178  Bit Score: 194.30  E-value: 4.42e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   7 RQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLvIKPSGVDYGLMTADDMVVVSLDtGEVVEGNKKPSSDTPTHRLLYQA 86
Cdd:pfam00596   1 EELAAAGRLLARRGLVEGTGGNISVRLPGDGFL-ITPSGVDFGELTPEDLVVVDLD-GNVVEGGLKPSSETPLHLAIYRA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  87 FPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEIngeyewETGNVIVETFRqqgidpAQMPGV 166
Cdd:pfam00596  79 RPDAGAVVHTHSPYATALSLAKEGLPPITQEAADFLGGDIPIIPYYTPGTE------ELGERIAEALG------GDRKAV 146
                         170       180       190
                  ....*....|....*....|....*....|
gi 1994014906 167 LVHSHGPFAWGKNAEDAVHNAIVLEEIAYM 196
Cdd:pfam00596 147 LLRNHGLLVWGKTLEEAFYLAEELERAAEI 176
PRK06833 PRK06833
L-fuculose-phosphate aldolase;
1-201 1.11e-25

L-fuculose-phosphate aldolase;


Pssm-ID: 180717 [Multi-domain]  Cd Length: 214  Bit Score: 99.44  E-value: 1.11e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   1 MLEDLKRQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDtGEVVEGNKKPSSDTPTH 80
Cdd:PRK06833    2 LLQKEREEIVAYGKKLISSGLTKGTGGNISIFNREQGLMAITPSGIDYFEIKPEDIVIMDLD-GKVVEGERKPSSELDMH 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  81 RLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHAdyFYGP-VPCTRLMTdaeingeyeWETGNVIVETFRQQGID 159
Cdd:PRK06833   81 LIFYRNREDINAIVHTHSPYATTLACLGWELPAVHYLIA--VAGPnVRCAEYAT---------FGTKELAENAFEAMEDR 149
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1994014906 160 PAqmpgVLVHSHGPFAWGKNAEDAVHnaiVLEEIAYMG-IFCR 201
Cdd:PRK06833  150 RA----VLLANHGLLAGANNLKNAFN---IAEEIEFCAeIYYQ 185
PRK05874 PRK05874
L-fuculose-phosphate aldolase; Validated
2-208 1.61e-20

L-fuculose-phosphate aldolase; Validated


Pssm-ID: 102036 [Multi-domain]  Cd Length: 217  Bit Score: 85.85  E-value: 1.61e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   2 LEDLKRQVLEANLALPQHNLVTLTWGNVSAvDRDKGVLVIKPSGVDYGLMTADDMVVVSLDtGEVVEG--NKKPSSDTPT 79
Cdd:PRK05874    4 VDDPESAVLAAAKDMLRRGLVEGTAGNISA-RRSDGNVVITPSSVDYAEMLLHDLVLVDAG-GAVLHAkdGRSPSTELNL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  80 HRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCtrlmtdAEINGEYEWETGNVIVETFRQQGid 159
Cdd:PRK05874   82 HLACYRAFDDIGSVIHSHPVWATMFAVAHEPIPACIDEFAIYCGGDVRC------TEYAASGTPEVGRNAVRALEGRA-- 153
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1994014906 160 paqmpGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLP 208
Cdd:PRK05874  154 -----AALIANHGLVAVGPRPDQVLRVTALVERTAQIVWGARALGGPVP 197
PRK08130 PRK08130
putative aldolase; Validated
27-219 2.31e-14

putative aldolase; Validated


Pssm-ID: 181241 [Multi-domain]  Cd Length: 213  Bit Score: 69.13  E-value: 2.31e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  27 GNVSAVDRDKGVLvIKPSGVDYGLMTADDMVVVSLDtGEVVEGnKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQ 106
Cdd:PRK08130   28 GNISARLDDGGWL-VTPTGSCLGRLDPARLSKVDAD-GNWLSG-DKPSKEVPLHRAIYRNNPECGAVVHLHSTHLTALSC 104
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906 107 AGqsipatGTTHADyfygpvpCTRLMTDAeingeYEWETGNVIVETFRQQGiDPA----------QMPGVLVHSHGPFAW 176
Cdd:PRK08130  105 LG------GLDPTN-------VLPPFTPY-----YVMRVGHVPLIPYYRPG-DPAiaealaglaaRYRAVLLANHGPVVW 165
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1994014906 177 GKNAEDAVHNAIVLEEIAYMGIFCRQLAPQ-LPDMQQTLLDKHY 219
Cdd:PRK08130  166 GSSLEAAVNATEELEETAKLILLLGGRPPRyLTDEEIAELRSTF 209
PRK08087 PRK08087
L-fuculose-phosphate aldolase;
5-208 4.46e-13

L-fuculose-phosphate aldolase;


Pssm-ID: 181226 [Multi-domain]  Cd Length: 215  Bit Score: 65.92  E-value: 4.46e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   5 LKRQVLEANLALPQHNLVTLTWGNVSAvdRDKGVLVIKPSGVDYGLMTADDMVVVSLDtGEVVEGnKKPSSDTPTHRLLY 84
Cdd:PRK08087    6 LARQIIDTCLEMTRLGLNQGTAGNVSV--RYQDGMLITPTGIPYEKLTESHIVFVDGN-GKHEEG-KLPSSEWRFHMAAY 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  85 QAFPTLGGIVHTHSRHATIWAQAGQSIPA-------TGTTHadyfygpVPCTRLMTdaeingeyeweTGNVIVETFRQQG 157
Cdd:PRK08087   82 QTRPDANAVVHNHAVHCTAVSILNRPIPAihymiaaAGGNS-------IPCAPYAT-----------FGTRELSEHVALA 143
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1994014906 158 IdpAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLP 208
Cdd:PRK08087  144 L--KNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLKTLAITDPVP 192
PRK09220 PRK09220
methylthioribulose 1-phosphate dehydratase;
25-103 3.60e-12

methylthioribulose 1-phosphate dehydratase;


Pssm-ID: 236415 [Multi-domain]  Cd Length: 204  Bit Score: 63.03  E-value: 3.60e-12
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1994014906  25 TWGNVSaVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDTGEVVEGnKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATI 103
Cdd:PRK09220   26 TSGNMS-VRLDEQHCAITVSGKDKGSLTAEDFLQVDIAGNAVPSG-RKPSAETLLHTQLYRLFPEIGAVLHTHSVNATV 102
PRK08660 PRK08660
aldolase;
19-192 1.25e-11

aldolase;


Pssm-ID: 181527 [Multi-domain]  Cd Length: 181  Bit Score: 61.13  E-value: 1.25e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  19 HNLVTLTWGNVSAvdRDKGVLVIKPSGVDYGLMTADDMVVVSLD-TGEVvegNKKPSSDTPTHRLLYQAFPTLGgIVHTH 97
Cdd:PRK08660   15 HGLVSSHFGNISV--RTGDGLLITRTGSMLDEITEGDVIEVGIDdDGSV---DPLASSETPVHRAIYRRTSAKA-IVHAH 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  98 SRHATIWA-QAGQSIPATGTTHadYFYGPVPctrlMTDAEINGEyewETGNVIVETFRQQGIdpaqmpgVLVHSHGPFAW 176
Cdd:PRK08660   89 PPYAVALSlLEDEIVPLDSEGL--YFLGTIP----VVGGDIGSG---ELAENVARALSEHKG-------VVVRGHGTFAI 152
                         170
                  ....*....|....*.
gi 1994014906 177 GKNAEDAVHNAIVLEE 192
Cdd:PRK08660  153 GKTLEEAYIYTSQLEH 168
PRK06357 PRK06357
hypothetical protein; Provisional
27-128 1.49e-08

hypothetical protein; Provisional


Pssm-ID: 180541 [Multi-domain]  Cd Length: 216  Bit Score: 53.24  E-value: 1.49e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  27 GNVS---AVDRDKGVLVIKP---SGVDYGLMTADDMVVVSLDTGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRH 100
Cdd:PRK06357   28 GNISvrmTAEKNKEYIIMTPtlmSEAKLCDLSPYQILVVDLNTGEVIEGVGRVTREINMHEAAYVANPKIKCVYHSHAKE 107
                          90       100
                  ....*....|....*....|....*...
gi 1994014906 101 ATIWAQAGQSIPatGTTHADYFYGPVPC 128
Cdd:PRK06357  108 SMFWATLGLEMP--NLTEATQKLGKIPT 133
PRK06661 PRK06661
hypothetical protein; Provisional
4-98 1.12e-04

hypothetical protein; Provisional


Pssm-ID: 168637  Cd Length: 231  Bit Score: 42.13  E-value: 1.12e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906   4 DLKRQVLEANLALPQHNLVTLTWGNVSAVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDtGEVVEGNKKPSSDTP--THR 81
Cdd:PRK06661    2 DIKYNLAAAYRIMAYLSLDDHTYTHLSARPKNADFYYIYPFGLRFEEVTTENLLKVSLD-GQILEGEEYQYNKTGyfIHG 80
                          90
                  ....*....|....*..
gi 1994014906  82 LLYQAFPTLGGIVHTHS 98
Cdd:PRK06661   81 SIYKTRPDISAIFHYHT 97
PRK06486 PRK06486
aldolase;
37-139 3.29e-04

aldolase;


Pssm-ID: 235814  Cd Length: 262  Bit Score: 40.85  E-value: 3.29e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  37 GVLVIKPSGVDYGLMTADDMVVVSLDtGEVVEGNKKPSsdtPT----HRLLYQAFPTLGGIVHTHSRHATIWAQ-AGQSI 111
Cdd:PRK06486   60 DLFLVNPYGYAFSEITASDLLICDFD-GNVLAGRGEPE---ATaffiHARIHRAIPRAKAAFHTHMPYATALSLtEGRPL 135
                          90       100
                  ....*....|....*....|....*...
gi 1994014906 112 PATGTThADYFYGpvpctRLMTDAEING 139
Cdd:PRK06486  136 TTLGQT-ALKFYG-----RTAVDEDYNG 157
mtnB PRK06754
methylthioribulose 1-phosphate dehydratase;
25-183 4.08e-04

methylthioribulose 1-phosphate dehydratase;


Pssm-ID: 180679 [Multi-domain]  Cd Length: 208  Bit Score: 40.03  E-value: 4.08e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  25 TWGNVS-AVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDTGEVVEGNKKPSSDTPTHRLLYQAfPTLGGIVHTHS----- 98
Cdd:PRK06754   27 TSGNLSiKVSDDPLTFLVTASGKDKRKTTPEDFLLVDHDGKPVEETELKPSAETLLHTHIYNN-TNAGCVLHVHTvdnnv 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  99 --------RHATIWAQagQSIPATGTTHADYFYgPVP----CTRLMTDAEingeyewETGNVIvetfrqqgidPAQMPGV 166
Cdd:PRK06754  106 iselygddGAVTFQGQ--EIIKALGIWEENAEI-HIPiienHADIPTLAE-------EFAKHI----------QGDSGAV 165
                         170
                  ....*....|....*..
gi 1994014906 167 LVHSHGPFAWGKNAEDA 183
Cdd:PRK06754  166 LIRNHGITVWGRDAFEA 182
PRK07090 PRK07090
class II aldolase/adducin domain protein; Provisional
27-102 1.86e-03

class II aldolase/adducin domain protein; Provisional


Pssm-ID: 180832  Cd Length: 260  Bit Score: 38.46  E-value: 1.86e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1994014906  27 GNVSAVDRDKGVLVIKPSGVDYGLMTADDMVVVSLDTgEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHAT 102
Cdd:PRK07090   53 GQITARAEAPGTYYTQRLGLGFDEITASNLLLVDEDL-NVLDGEGMPNPANRFHSWIYRARPDVNCIIHTHPPHVA 127
PRK06208 PRK06208
class II aldolase/adducin family protein;
43-109 2.26e-03

class II aldolase/adducin family protein;


Pssm-ID: 235743  Cd Length: 274  Bit Score: 38.43  E-value: 2.26e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1994014906  43 PSGVDYGLMTADDMVVVSLDtGEVVEGNKKPS-SDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQ 109
Cdd:PRK06208   82 PLGVHFSQIKVSDLLLVDHD-GEVVEGDRPLNrAAFAIHSAIHEARPDVVAAAHTHSTYGKAWSTLGR 148
PRK08333 PRK08333
aldolase;
27-194 2.42e-03

aldolase;


Pssm-ID: 181393 [Multi-domain]  Cd Length: 184  Bit Score: 37.49  E-value: 2.42e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906  27 GNVSAvdRDKGVLVIKPSGVDYGLMTADDMVVVSLDtGEVVEGnKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQ 106
Cdd:PRK08333   26 GNLSI--RVGNLVFIKATGSVMDELTREQVAVIDLN-GNQLSS-VRPSSEYRLHLAVYRNRPDVRAIAHLHPPYSIVAST 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994014906 107 AGQSIPATGTTHADYFYGPVPCtrlmtdAEINGEYEWETGNVIVETFRQQGidpaqmpGVLVHSHGPFAWGKNAEDAVHN 186
Cdd:PRK08333  102 LLEEELPIITPEAELYLKKIPI------LPFRPAGSVELAEQVAEAMKEYD-------AVIMERHGIVTVGRSLREAFYK 168

                  ....*...
gi 1994014906 187 AIVLEEIA 194
Cdd:PRK08333  169 AELVEESA 176
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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