|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10110 |
PRK10110 |
PTS maltose transporter subunit IICB; |
1-523 |
0e+00 |
|
PTS maltose transporter subunit IICB;
Pssm-ID: 182245 [Multi-domain] Cd Length: 530 Bit Score: 647.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 1 MTQEKSFKSKAWEFFQSLGKTFMFPVSLLAFMGLLLGIGSSVTSPSTIKSFPFLGGELTQLTFGFIAMVGGFAFTYLPLM 80
Cdd:PRK10110 1 MTAKTAPKVTLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSSHDVITLIPFLGNPVLQAIFTWMSKIGSFAFSFLPVM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 81 FAMAIPMGLARRNKAVGAFAGFVGYMLMNMSINYYLTATHQLA--DAATMRQVGQSIVLGIQTLEMGVLGGIVVGVITYF 158
Cdd:PRK10110 81 FCIAIPLGLARENKGVAAFAGFVGYAVMNLAVNFWLTNKGILPttDAAVLKANNIQSILGIQSIDTGILGAVIAGIIVWM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 159 LHERFQDTVLHDAFAFFSGIRFVPIVTALTLSLVGLVIPLLWEYVAMGIAGIGHIIQSTSVFGPFLYGVGVLLLKPFGLH 238
Cdd:PRK10110 161 LHERFHNIRLPDALAFFGGTRFVPIISSLVMGLVGLVIPLVWPIFAMGISGLGHMINSAGDFGPMLFGTGERLLLPFGLH 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 239 HILLAMVRFTPAGGIEMVNGQEVAGALNIFYAELKAGLP--FSPHVTAFLSQGFMPTFIFGLPAVAYAIYRTARPENRPV 316
Cdd:PRK10110 241 HILVALIRFTDAGGTQEVCGQTVSGALTIFQAQLSCPTThgFSESATRFLSQGKMPAFLGGLPGAALAMYHCARPENRHK 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 317 IKGLLLSGVLVSVVTGISEPIEFLFLFIAPVLYAFHIVMSGLALMVMALLGVTIGNTDGGILDLLIFGVMQGMSTKWYLL 396
Cdd:PRK10110 321 IKGLLISGVIACVVGGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVTIGNTDGNIIDFVVFGILHGLSTKWYMV 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 397 FPVGIAWFAIYFFVFRWYILKHDIKTPGREVDAQGALQAVEANtrARGKSKYDHGLILRALGGKENIESLDNCITRLRLV 476
Cdd:PRK10110 401 PVVAAIWFVVYYVIFRFAITRFNLKTPGRDSEVASSIEKAVAG--APGKSGYNVPAILEALGGADNIVSLDNCITRLRLS 478
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 1995764525 477 VKDMGLIDQQALKAAGALSVVVLDAHSVQVIIGPQVQSVKSGIEALI 523
Cdd:PRK10110 479 VKDMSLVDVQALKDNRAIGVVQLNQHNLQVVIGPQVQSVKDEMAGLM 525
|
|
| PTS-IIBC-malX |
TIGR02004 |
PTS system, maltose and glucose-specific IIBC component; This model represents a family of PTS ... |
8-523 |
0e+00 |
|
PTS system, maltose and glucose-specific IIBC component; This model represents a family of PTS enzyme II fused B and C components including and most closely related to the MalX maltose and glucose-specific transporter of E. coli. A pair of paralogous genes from E. coli strain CFT073 score between trusted and noise and may have diverged sufficiently to have an altered substrate specificity. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Pssm-ID: 273924 [Multi-domain] Cd Length: 517 Bit Score: 597.21 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 8 KSKAWEFFQSLGKTFMFPVSLLAFMGLLLGIGSSVTSPSTIKSFPFLGGELTQLTFGFIAMVGGFAFTYLPLMFAMAIPM 87
Cdd:TIGR02004 1 KATFWEFFQGLGKTFMLPVALLAFMGILLGLGSSFSSEAMIETIPFLGKPAFKIIFQWMSTIGLVAFAYLPVMFAMAIPL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 88 GLARRNKAVGAFAGFVGYMLMNMSINYYLTATHQLADAATMRQVGQSIVLGIQTLEMGVLGGIVVGVITYFLHERFQDTV 167
Cdd:TIGR02004 81 GLAREEKGVAAFSGFVGYTAMNLAINFYLTQTGVLVDPEQLREAGQGMVFGIQSIDTGVLGAVIVGLIVYKLHNRFYTVQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 168 LHDAFAFFSGIRFVPIVTALTLSLVGLVIPLLWEYVAMGIAGIGHIIQSTSVFGPFLYGVGVLLLKPFGLHHILLAMVRF 247
Cdd:TIGR02004 161 MPDALAFFGGARFVPIISALVLAVVGLVIPLVWPLFALMIMAIGQLIQRSGIFGPFLFGSGERLLLPIGLHHILVAMIRF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 248 TPAGGIEMVNGQEVAGALNIFYAELKAGLP--FSPHVTAFLSQGFMPTFIFGLPAVAYAIYRTARPENRPVIKGLLLSGV 325
Cdd:TIGR02004 241 TEAGGSAVVCGKEVSGALNIFYAELQCNLPisAVPSATAFLSQGKMPTFLGGLPGAALAMYHCARPANRHKIKALLLSGV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 326 LVSVVTGISEPIEFLFLFIAPVLYAFHIVMSGLALMVMALLGVTIGNTDGGILDLLIFGVMQGMSTKWYLLFPVGIAWFA 405
Cdd:TIGR02004 321 VACAVGGITEPLEFLFLFVAPLLYLVHAILTGLGFMVMALLGVVIGNTDGNLIDFLVFGVLQGTYTKWYLVPIVAAIWFV 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 406 IYFFVFRWYILKHDIKTPGREvDAQGALQAVEANTRARGKSKYDHGLILRALGGKENIESLDNCITRLRLVVKDMGLIDQ 485
Cdd:TIGR02004 401 VYYFVFKTAITTFDLKTPGRE-KVLDAEEYTEQEVAYKKTGGYDAAAILAALGGQENIQSLDNCITRLRLVVADANKVDD 479
|
490 500 510
....*....|....*....|....*....|....*...
gi 1995764525 486 QALKAAGALSVVVLDAHSVQVIIGPQVQSVKSGIEALI 523
Cdd:TIGR02004 480 AKLKQLGALGVVKLDAHNVQVVIGTQVTTVKNQLEMIL 517
|
|
| PtsG1 |
COG1263 |
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific ... |
5-523 |
2.09e-64 |
|
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [Carbohydrate transport and metabolism];
Pssm-ID: 440875 [Multi-domain] Cd Length: 463 Bit Score: 216.73 E-value: 2.09e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 5 KSFKSKAWEFFQSLGKTFMFPVSLLAFMGLLLGIGSSVTSPSTIKSFPFLGGeltqlTFGFIAMVGGFAFTYLPLMFAMA 84
Cdd:COG1263 2 KKKKNPLFRFLQKIGGIFMPPIPVLPAAGLLLGLGALLTNPGLLGEGSFLSG-----TYQILNAAGDAVFYFLPLLFAIG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 85 IPMGLArrnkAVGAFAGFVGYMLMNMSINyyltathqladAATMRQVGQSIVLGIQTL---EMGVLGGIVVGVITYFLhE 161
Cdd:COG1263 77 AAKGFG----GNPALAAVIGYLLVHPTLL-----------NAYAVAGGYISFLGIPTLigyQGGVFPGILAGWLAAYL-E 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 162 RFQDTVLHDAFAFFsgirFVPIVTALTLSLVGL-VIPLLWEYVAMGIA-GIGHIIQSTSVFGPFLYGVGVLLLKPFGLHH 239
Cdd:COG1263 141 KFLKKKLPDALGFF----FVPILTLLIMVPLALlVIGPIWPPIGNGIAaGLGWIYGLAGAIGGFIYGFLYRLLVPTGLHH 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 240 ILLAMVRFTPAGgiemvngqevAGALNIFyaelkaglpfsphvtaflsqGFMPTFIFGLPAVAYAIYRTARPenRPVIKG 319
Cdd:COG1263 217 GLNPIFWFLLGG----------TGDDGLF--------------------PILAAAMFGQPGAALAVYLKAKP--NKKVKG 264
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 320 LLLSGVLVSVVTGISEPIEFLFLFIAPVLYAFHIVMSGLALMVMALLGVTI-GNTDGGILDLLIFgvMQGMSTKWyLLFP 398
Cdd:COG1263 265 LAISAALTAFLTGITEPAEFGFNLVAPKLFIAHAIGGGLGGAIAGLLGVKAfSFGVGGLIDFPSI--LNPGATNL-LLYL 341
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 399 VGIAWFAIYFFVFRWYIlkhdiktpGREVDAQGALQAVEANTRARGKSKydhglILRALGGKENIESLDNCITRLRLVVK 478
Cdd:COG1263 342 IGLVIAFVYYFVFTFLI--------GREDEEEEEKLATKADAKKEEAEA-----AAAALGGGGGLLLLEADITVLLLTLV 408
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 1995764525 479 DMGLIDQQALKAAGALSVVVLDAHSVQVIIGPQVQSVKSGIEALI 523
Cdd:COG1263 409 DVVIVVVKDVVKLAAAGAVVVGVGGVGAVGGVGGGGVVIVIVIII 453
|
|
| PTS_EIIC |
pfam02378 |
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase ... |
19-357 |
4.53e-41 |
|
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). The IIC domain catalyzes the transfer of a phosphoryl group from IIB to the sugar substrate.
Pssm-ID: 367061 Cd Length: 315 Bit Score: 150.19 E-value: 4.53e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 19 GKTFMFPVSLLAFMGLLLGIGSSvtsPSTIKSFPFLGGELTQLTFGFIAMVGGFAFTYLPLMFAMAIPMGLARRNkAVGA 98
Cdd:pfam02378 1 GDGFMPPIPLLIAGGILLGLGNL---PNDTTGLPAGGFTGDSPLAEILKQAGSAAFGILPILFAIGIAYGLAGGD-GVAG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 99 FAGFVGYMLMN-MSINYYLTATHQLAdaatmrqvGQSIVLGIQTLEMGVLGGIVVGVITYFLHERFQDTV---LHDAFAF 174
Cdd:pfam02378 77 AAGLIGLLSFNlAAAISVALTAAGLS--------GGGNILGIGLGATGVFGAIIPGLLAAYLYNRFEKNItikLPDSLPF 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 175 FSGIRFVPIVTAL-TLSLVGLVIPLLWEYVAMGIAGIGHIIQ-STSVFGPFLYGVGVLLLKPFGLHHILLAMVRFTPAGG 252
Cdd:pfam02378 149 FVGKRFVPIITGFvTLLVIGPVLGLIWPAIQGGLNALGLLLIiAGGILGGLIFGFLERLLWPFGLHGAFIAIFWFLPIGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 253 IEMVNGQEVAGAlnifyaelkaglpfspHVTAFLSQGFMptFIFGLPAVAYAIYRTARPENRPVIKGLLLSGVLVSVVTG 332
Cdd:pfam02378 229 SNPIANQQAYGA----------------GAAHILTGGFD--VMFGGPGATLALYAAAFLFKKSKVKKLLGSAALTPFLFG 290
|
330 340
....*....|....*....|....*
gi 1995764525 333 ISEPIEFLFLFIAPVLYAFHIVMSG 357
Cdd:pfam02378 291 ITEPLEFGFPFVLNPPFFIPAILAG 315
|
|
| PTS_IIB_glc |
cd00212 |
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: ... |
453-523 |
3.03e-27 |
|
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation
Pssm-ID: 238130 [Multi-domain] Cd Length: 78 Bit Score: 104.54 E-value: 3.03e-27
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1995764525 453 ILRALGGKENIESLDNCITRLRLVVKDMGLIDQQALKAAGALSVVVLDAHSVQVIIGPQV-QSVKSGIEALI 523
Cdd:cd00212 7 ILEALGGKENIVSLDHCATRLRLTVKDESKVDEAALKKLGGVKGVVKNGGQYQVIIGPGVaDVYKEAIKLLG 78
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10110 |
PRK10110 |
PTS maltose transporter subunit IICB; |
1-523 |
0e+00 |
|
PTS maltose transporter subunit IICB;
Pssm-ID: 182245 [Multi-domain] Cd Length: 530 Bit Score: 647.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 1 MTQEKSFKSKAWEFFQSLGKTFMFPVSLLAFMGLLLGIGSSVTSPSTIKSFPFLGGELTQLTFGFIAMVGGFAFTYLPLM 80
Cdd:PRK10110 1 MTAKTAPKVTLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSSHDVITLIPFLGNPVLQAIFTWMSKIGSFAFSFLPVM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 81 FAMAIPMGLARRNKAVGAFAGFVGYMLMNMSINYYLTATHQLA--DAATMRQVGQSIVLGIQTLEMGVLGGIVVGVITYF 158
Cdd:PRK10110 81 FCIAIPLGLARENKGVAAFAGFVGYAVMNLAVNFWLTNKGILPttDAAVLKANNIQSILGIQSIDTGILGAVIAGIIVWM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 159 LHERFQDTVLHDAFAFFSGIRFVPIVTALTLSLVGLVIPLLWEYVAMGIAGIGHIIQSTSVFGPFLYGVGVLLLKPFGLH 238
Cdd:PRK10110 161 LHERFHNIRLPDALAFFGGTRFVPIISSLVMGLVGLVIPLVWPIFAMGISGLGHMINSAGDFGPMLFGTGERLLLPFGLH 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 239 HILLAMVRFTPAGGIEMVNGQEVAGALNIFYAELKAGLP--FSPHVTAFLSQGFMPTFIFGLPAVAYAIYRTARPENRPV 316
Cdd:PRK10110 241 HILVALIRFTDAGGTQEVCGQTVSGALTIFQAQLSCPTThgFSESATRFLSQGKMPAFLGGLPGAALAMYHCARPENRHK 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 317 IKGLLLSGVLVSVVTGISEPIEFLFLFIAPVLYAFHIVMSGLALMVMALLGVTIGNTDGGILDLLIFGVMQGMSTKWYLL 396
Cdd:PRK10110 321 IKGLLISGVIACVVGGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVTIGNTDGNIIDFVVFGILHGLSTKWYMV 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 397 FPVGIAWFAIYFFVFRWYILKHDIKTPGREVDAQGALQAVEANtrARGKSKYDHGLILRALGGKENIESLDNCITRLRLV 476
Cdd:PRK10110 401 PVVAAIWFVVYYVIFRFAITRFNLKTPGRDSEVASSIEKAVAG--APGKSGYNVPAILEALGGADNIVSLDNCITRLRLS 478
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 1995764525 477 VKDMGLIDQQALKAAGALSVVVLDAHSVQVIIGPQVQSVKSGIEALI 523
Cdd:PRK10110 479 VKDMSLVDVQALKDNRAIGVVQLNQHNLQVVIGPQVQSVKDEMAGLM 525
|
|
| PTS-IIBC-malX |
TIGR02004 |
PTS system, maltose and glucose-specific IIBC component; This model represents a family of PTS ... |
8-523 |
0e+00 |
|
PTS system, maltose and glucose-specific IIBC component; This model represents a family of PTS enzyme II fused B and C components including and most closely related to the MalX maltose and glucose-specific transporter of E. coli. A pair of paralogous genes from E. coli strain CFT073 score between trusted and noise and may have diverged sufficiently to have an altered substrate specificity. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Pssm-ID: 273924 [Multi-domain] Cd Length: 517 Bit Score: 597.21 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 8 KSKAWEFFQSLGKTFMFPVSLLAFMGLLLGIGSSVTSPSTIKSFPFLGGELTQLTFGFIAMVGGFAFTYLPLMFAMAIPM 87
Cdd:TIGR02004 1 KATFWEFFQGLGKTFMLPVALLAFMGILLGLGSSFSSEAMIETIPFLGKPAFKIIFQWMSTIGLVAFAYLPVMFAMAIPL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 88 GLARRNKAVGAFAGFVGYMLMNMSINYYLTATHQLADAATMRQVGQSIVLGIQTLEMGVLGGIVVGVITYFLHERFQDTV 167
Cdd:TIGR02004 81 GLAREEKGVAAFSGFVGYTAMNLAINFYLTQTGVLVDPEQLREAGQGMVFGIQSIDTGVLGAVIVGLIVYKLHNRFYTVQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 168 LHDAFAFFSGIRFVPIVTALTLSLVGLVIPLLWEYVAMGIAGIGHIIQSTSVFGPFLYGVGVLLLKPFGLHHILLAMVRF 247
Cdd:TIGR02004 161 MPDALAFFGGARFVPIISALVLAVVGLVIPLVWPLFALMIMAIGQLIQRSGIFGPFLFGSGERLLLPIGLHHILVAMIRF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 248 TPAGGIEMVNGQEVAGALNIFYAELKAGLP--FSPHVTAFLSQGFMPTFIFGLPAVAYAIYRTARPENRPVIKGLLLSGV 325
Cdd:TIGR02004 241 TEAGGSAVVCGKEVSGALNIFYAELQCNLPisAVPSATAFLSQGKMPTFLGGLPGAALAMYHCARPANRHKIKALLLSGV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 326 LVSVVTGISEPIEFLFLFIAPVLYAFHIVMSGLALMVMALLGVTIGNTDGGILDLLIFGVMQGMSTKWYLLFPVGIAWFA 405
Cdd:TIGR02004 321 VACAVGGITEPLEFLFLFVAPLLYLVHAILTGLGFMVMALLGVVIGNTDGNLIDFLVFGVLQGTYTKWYLVPIVAAIWFV 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 406 IYFFVFRWYILKHDIKTPGREvDAQGALQAVEANTRARGKSKYDHGLILRALGGKENIESLDNCITRLRLVVKDMGLIDQ 485
Cdd:TIGR02004 401 VYYFVFKTAITTFDLKTPGRE-KVLDAEEYTEQEVAYKKTGGYDAAAILAALGGQENIQSLDNCITRLRLVVADANKVDD 479
|
490 500 510
....*....|....*....|....*....|....*...
gi 1995764525 486 QALKAAGALSVVVLDAHSVQVIIGPQVQSVKSGIEALI 523
Cdd:TIGR02004 480 AKLKQLGALGVVKLDAHNVQVVIGTQVTTVKNQLEMIL 517
|
|
| PTS-II-BC-glcB |
TIGR02002 |
PTS system, glucose-specific IIBC component; This model represents the combined B and C ... |
10-523 |
8.49e-110 |
|
PTS system, glucose-specific IIBC component; This model represents the combined B and C domains of the PTS transport system enzyme II specific for glucose transport. Many of the genes in this family also include an A domain as part of the same polypeptide and thus should be given the name "PTS system, glucose-specific IIABC component" while the B. subtilus enzyme also contains an enzyme III domain which appears to act independently of the enzyme II domains. This family is most closely related to the N-acetylglucosamine-specific PTS enzymes (TIGR01998). [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Pssm-ID: 273923 [Multi-domain] Cd Length: 502 Bit Score: 335.98 E-value: 8.49e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 10 KAWEFFQSLGKTFMFPVSLLAFMGLLLGIGSSVTSPSTIKSFPFLGGELTQLTFGFIAMVGGFAFTYLPLMFAMAIPMGL 89
Cdd:TIGR02002 3 KAFGQLQKIGKALMLPVAVLPVAGILLGFGNANQNNQVFSFLPFLHMEWIQLVSKVMEAAGGIIFANLPLIFAIGVALGL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 90 ARrNKAVGAFAGFVGYMLMNMSINYYLTATHQLADAATMrqvGQSIVLGIQTLEMGVLGGIVVGVITYFLHERFQDTVLH 169
Cdd:TIGR02002 83 AG-NDGVAGLAALVGYLIMNKTMGVVAGLTLLLIASEIA---SFASVLGIPTLQTGVFGGIIIGAIAAYCYNRFYNIKLP 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 170 DAFAFFSGIRFVPIVTALTLSLVGLVIPLLWEYVAMGIAGIGH-IIQSTSVFGPFLYGVGVLLLKPFGLHHILLAMVRFT 248
Cdd:TIGR02002 159 EYLGFFAGKRFVPIITGLAAIVTGIVLSFIWPPVQDALNTFSHwAAYQNPVVAFFIFGFIERSLIPFGLHHIFNAPFWFE 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 249 pAGGIEMVNGQEVAGALNIFYAELKAGLPFSphVTAFLSQGFmPTFIFGLPAVAYAIYRTARPENRPVIKGLLLSGVLVS 328
Cdd:TIGR02002 239 -FGSYTNEAGNLFRGDQPIFMAQLKDGVAFT--AGGFLSGGF-PFMMFGLPAAALAIYHSAKPENKKLVGGLMISAALTS 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 329 VVTGISEPIEFLFLFIAPVLYAFHIVMSGLALMVMALLGVTIGNT-DGGILDLLIFGVMQGmSTKWYLLFPVGIAWFAIY 407
Cdd:TIGR02002 315 FLTGITEPLEFSFLFVAPILYVIHAILAGLSFPIMILLGVKIGTTfSGGAIDFILYGLLSN-RSKAWLFIIVGIGYAIIY 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 408 FFVFRWYILKHDIKTPGREVDAQGALQAVEANTRARGkskydhglILRALGGKENIESLDNCITRLRLVVKDMGLIDQQA 487
Cdd:TIGR02002 394 YFLFRFLIKKLNLKTPGREDATAEAKATGEPSELAFD--------VVAALGGKENITSLDACITRLRVSVADISKVDVAK 465
|
490 500 510
....*....|....*....|....*....|....*.
gi 1995764525 488 LKAAGALSVVVLdAHSVQVIIGPQVQSVKSGIEALI 523
Cdd:TIGR02002 466 LKKLGAAGVLVV-GNNVQAIFGPKSDTIKSEMHDII 500
|
|
| PRK11089 |
PRK11089 |
PTS system glucose-specific transporter subunits IIBC; Provisional |
16-523 |
7.50e-77 |
|
PTS system glucose-specific transporter subunits IIBC; Provisional
Pssm-ID: 182955 [Multi-domain] Cd Length: 477 Bit Score: 249.63 E-value: 7.50e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 16 QSLGKTFMFPVSLLAFMGLLLGIGSSvtspstikSFPFLGGELTQLtfgfIAMVGGFAFTYLPLMFAMAIPMGLARrNKA 95
Cdd:PRK11089 10 QKVGKSLMLPVSVLPIAGILLGVGSA--------NFSWLPAVVSHV----MAEAGGSVFANMPLIFAIGVALGFTN-NDG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 96 VGAFAGFVGYMLM--NMSINYYLTATHQLADAATMRQVGQSIVLGIqtlemgvlggiVVGVITYFLHERFQDTVLHDAFA 173
Cdd:PRK11089 77 VSALAAVVAYGIMvkTMAVVAPLVLHLPAEEIAAKHLADTGVLGGI-----------IAGAIAAYMFNRFYRIKLPEYLG 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 174 FFSGIRFVPIVTALTLSLVGLVIPLLWeyvamgiAGIGHIIQSTS----------VFGpfLYGVGVLLLKPFGLHHILla 243
Cdd:PRK11089 146 FFAGKRFVPIISGLAAIFTGVVLSFIW-------PPIGSAIQTFSqwaayqnpvvAFG--IYGFVERSLVPFGLHHIW-- 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 244 MVRFtpaggiEMVNGQEVAGALNIFYAELKAGLPFSPhVTAFLSQGFMPTfIFGLPAVAYAIYRTARPENRPVIKGLLLS 323
Cdd:PRK11089 215 NVPF------QMQIGEYTNAAGQVFHGDIPRYMAGDP-TAGKLSGGFLFK-MYGLPAAAIAIWHSAKPENRAKVGGIMIS 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 324 GVLVSVVTGISEPIEFLFLFIAPVLYAFHIVMSGLALMVMALLGVTIGNT-DGGILDlliFGVMQGMSTKWYLLFPVGIA 402
Cdd:PRK11089 287 AALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGMRDGTSfSHGLID---FIVLSGNSSKLWLFPIVGIG 363
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 403 WFAIYFFVFRWYILKHDIKTPGREvdaqgalqaVEANTRARGKSKYDHGLILRALGGKENIESLDNCITRLRLVVKDMGL 482
Cdd:PRK11089 364 YAIVYYTIFRVLIKALDLKTPGRE---------DETEDAKATGTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSK 434
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 1995764525 483 IDQQALKAAGALSVVVLdAHSVQVIIGPQVQSVKSGIEALI 523
Cdd:PRK11089 435 VDQAGLKKLGAAGVVVA-GSGVQAIFGTKSDNLKTEMDEYI 474
|
|
| PtsG1 |
COG1263 |
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific ... |
5-523 |
2.09e-64 |
|
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [Carbohydrate transport and metabolism];
Pssm-ID: 440875 [Multi-domain] Cd Length: 463 Bit Score: 216.73 E-value: 2.09e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 5 KSFKSKAWEFFQSLGKTFMFPVSLLAFMGLLLGIGSSVTSPSTIKSFPFLGGeltqlTFGFIAMVGGFAFTYLPLMFAMA 84
Cdd:COG1263 2 KKKKNPLFRFLQKIGGIFMPPIPVLPAAGLLLGLGALLTNPGLLGEGSFLSG-----TYQILNAAGDAVFYFLPLLFAIG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 85 IPMGLArrnkAVGAFAGFVGYMLMNMSINyyltathqladAATMRQVGQSIVLGIQTL---EMGVLGGIVVGVITYFLhE 161
Cdd:COG1263 77 AAKGFG----GNPALAAVIGYLLVHPTLL-----------NAYAVAGGYISFLGIPTLigyQGGVFPGILAGWLAAYL-E 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 162 RFQDTVLHDAFAFFsgirFVPIVTALTLSLVGL-VIPLLWEYVAMGIA-GIGHIIQSTSVFGPFLYGVGVLLLKPFGLHH 239
Cdd:COG1263 141 KFLKKKLPDALGFF----FVPILTLLIMVPLALlVIGPIWPPIGNGIAaGLGWIYGLAGAIGGFIYGFLYRLLVPTGLHH 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 240 ILLAMVRFTPAGgiemvngqevAGALNIFyaelkaglpfsphvtaflsqGFMPTFIFGLPAVAYAIYRTARPenRPVIKG 319
Cdd:COG1263 217 GLNPIFWFLLGG----------TGDDGLF--------------------PILAAAMFGQPGAALAVYLKAKP--NKKVKG 264
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 320 LLLSGVLVSVVTGISEPIEFLFLFIAPVLYAFHIVMSGLALMVMALLGVTI-GNTDGGILDLLIFgvMQGMSTKWyLLFP 398
Cdd:COG1263 265 LAISAALTAFLTGITEPAEFGFNLVAPKLFIAHAIGGGLGGAIAGLLGVKAfSFGVGGLIDFPSI--LNPGATNL-LLYL 341
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 399 VGIAWFAIYFFVFRWYIlkhdiktpGREVDAQGALQAVEANTRARGKSKydhglILRALGGKENIESLDNCITRLRLVVK 478
Cdd:COG1263 342 IGLVIAFVYYFVFTFLI--------GREDEEEEEKLATKADAKKEEAEA-----AAAALGGGGGLLLLEADITVLLLTLV 408
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 1995764525 479 DMGLIDQQALKAAGALSVVVLDAHSVQVIIGPQVQSVKSGIEALI 523
Cdd:COG1263 409 DVVIVVVKDVVKLAAAGAVVVGVGGVGAVGGVGGGGVVIVIVIII 453
|
|
| PRK10255 |
PRK10255 |
PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional |
14-523 |
4.76e-64 |
|
PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional
Pssm-ID: 182338 [Multi-domain] Cd Length: 648 Bit Score: 220.13 E-value: 4.76e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 14 FFQSLGKTFMFPVSLLAFMGLLLGIGSsvtspstiksfPFLggeltqLTFGFIAMVGGFAFTYLPLMFAMAIPMGLARRN 93
Cdd:PRK10255 6 FFQRLGRALQLPIAVLPVAALLLRFGQ-----------PDL------LNVAFIAQAGGAIFDNLALIFAIGVASSWSKDS 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 94 KAVGAFAGFVGYMLMNMSinyyltathqladaatMRQVGQSIVLGIqtleMGVLGGIVVGVITYflhERFQDTVLHDAFA 173
Cdd:PRK10255 69 AGAAALAGAVGYFVLTKA----------------MVTINPEINMGV----LAGIITGLVGGAAY---NRWSDIKLPDFLS 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 174 FFSGIRFVPIVTALTLSLVGLVIPLLWEYVAMGIAGIGHIIQSTSVFGPFLYGVGVLLLKPFGLHHILLAMVRFTpAGGI 253
Cdd:PRK10255 126 FFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIHAGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQ-IGEF 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 254 EMVNGQEVAGALNIFYA-ELKAGLpfsphvtaFLSqGFMPTFIFGLPAVAYAIYRTARPENRPVIKGLLLSGVLVSVVTG 332
Cdd:PRK10255 205 TNAAGTVFHGDINRFYAgDGTAGM--------FMS-GFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTG 275
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 333 ISEPIEFLFLFIAPVLYAFHIVMSGLALMVMALLGVTIG-NTDGGILDLLIFGVMQGMSTKWYLLFPVGIAWFAIYFFVF 411
Cdd:PRK10255 276 VTEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGfSFSAGAIDYALMYNLPAASQNVWMLLVMGVVFFAIYFVLF 355
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 412 RWYILKHDIKTPGREvDAQGALQAVEANTRARGKSKYDHGLILRALGGKENIESLDNCITRLRLVVKDMGLIDQQALKAA 491
Cdd:PRK10255 356 SAVIRMFNLKTPGRE-DKEDEIVTEEANSNTEEGLTQLATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDAMCKRL 434
|
490 500 510
....*....|....*....|....*....|..
gi 1995764525 492 GALSVVVLDAHSVQVIIGPQVQSVKSGIEALI 523
Cdd:PRK10255 435 GASGVVKLNKQTIQVIVGAKAESIGDAMKKVV 466
|
|
| pts-Glc |
TIGR00852 |
PTS system, maltose and glucose-specific subfamily, IIC component; The PTS Glucose-Glucoside ... |
70-368 |
1.98e-49 |
|
PTS system, maltose and glucose-specific subfamily, IIC component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the E. coli PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-cellobiose (ASC), trehalose (Tre), putative glucoside (Glv) and sucrose (Scr) permeases of E. coli . Most, but not all Scr permeases of other bacteria also lack a IIA domain. This model is specific for the IIC domain of the Glc family PTS transporters. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]
Pssm-ID: 273299 Cd Length: 289 Bit Score: 171.73 E-value: 1.98e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 70 GGFAFTYLPLMFAMAIPMGLARRNKAVGAFAGFVGYMLMNMSINYYLTATHQLADAATMRQVGQSIVLGIqtlemgvlgg 149
Cdd:TIGR00852 1 GSAAFFFLPLLFAIGAAKGFGGNPYLGAALAGILVHPVLNNAMGVGAQAVGNFFGFEIAKVGYTGVVGPI---------- 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 150 iVVGVITYFLHERFQDTVLHDAFAFFSGIRFVPIVTALTLSLVGLVIPLLWEYVAMGiAGIGHIIQSTSVFGPFLYGVGV 229
Cdd:TIGR00852 71 -IVGAIALALHERFLDKKLPDVLGFFLGPRFVVIIAGFVAILLIGPLGRVWPPVGIS-ALLHWLYSAGGALGGAIFGFLY 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 230 LLLKPFGLHHILLAMVRFTPAGGIEMVNGQEVAGALNIFYAELKAGLP--FSPHVTAFLSQGFMPTFIFGLPAVAYAIYR 307
Cdd:TIGR00852 149 RLLVPTGLHHIFYAIFIQLIAGGTVIGGGQVIPGDALANMAQGGAALAvfFTAGDAKFKSIGLPAAFSAGLGITEPAMYG 228
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1995764525 308 TARPENRPVIKGLLLSGVLVSVVTGISEPIEFLFLFIAPVLYAFHIVMSGLALMVMALLGV 368
Cdd:TIGR00852 229 VALRERRPFVAGLIGSALLTAFLTGITEPLEFLFLFGAPGLYSIHAVLAGSIFTVAIGMGI 289
|
|
| PTS_EIIC |
pfam02378 |
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase ... |
19-357 |
4.53e-41 |
|
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). The IIC domain catalyzes the transfer of a phosphoryl group from IIB to the sugar substrate.
Pssm-ID: 367061 Cd Length: 315 Bit Score: 150.19 E-value: 4.53e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 19 GKTFMFPVSLLAFMGLLLGIGSSvtsPSTIKSFPFLGGELTQLTFGFIAMVGGFAFTYLPLMFAMAIPMGLARRNkAVGA 98
Cdd:pfam02378 1 GDGFMPPIPLLIAGGILLGLGNL---PNDTTGLPAGGFTGDSPLAEILKQAGSAAFGILPILFAIGIAYGLAGGD-GVAG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 99 FAGFVGYMLMN-MSINYYLTATHQLAdaatmrqvGQSIVLGIQTLEMGVLGGIVVGVITYFLHERFQDTV---LHDAFAF 174
Cdd:pfam02378 77 AAGLIGLLSFNlAAAISVALTAAGLS--------GGGNILGIGLGATGVFGAIIPGLLAAYLYNRFEKNItikLPDSLPF 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 175 FSGIRFVPIVTAL-TLSLVGLVIPLLWEYVAMGIAGIGHIIQ-STSVFGPFLYGVGVLLLKPFGLHHILLAMVRFTPAGG 252
Cdd:pfam02378 149 FVGKRFVPIITGFvTLLVIGPVLGLIWPAIQGGLNALGLLLIiAGGILGGLIFGFLERLLWPFGLHGAFIAIFWFLPIGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 253 IEMVNGQEVAGAlnifyaelkaglpfspHVTAFLSQGFMptFIFGLPAVAYAIYRTARPENRPVIKGLLLSGVLVSVVTG 332
Cdd:pfam02378 229 SNPIANQQAYGA----------------GAAHILTGGFD--VMFGGPGATLALYAAAFLFKKSKVKKLLGSAALTPFLFG 290
|
330 340
....*....|....*....|....*
gi 1995764525 333 ISEPIEFLFLFIAPVLYAFHIVMSG 357
Cdd:pfam02378 291 ITEPLEFGFPFVLNPPFFIPAILAG 315
|
|
| PtsG2 |
COG1264 |
Phosphotransferase system IIB components [Carbohydrate transport and metabolism]; |
453-523 |
6.54e-30 |
|
Phosphotransferase system IIB components [Carbohydrate transport and metabolism];
Pssm-ID: 440876 [Multi-domain] Cd Length: 76 Bit Score: 111.75 E-value: 6.54e-30
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1995764525 453 ILRALGGKENIESLDNCITRLRLVVKDMGLIDQQALKAAGALSVVVLDaHSVQVIIGPQVQSVKSGIEALI 523
Cdd:COG1264 7 ILEALGGKENIVSVDHCATRLRVTVKDPSKVDEAALKKLGVKGVVKNG-GQVQVIIGPGVDKVADEIEKLL 76
|
|
| PTS_IIB_glc |
cd00212 |
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: ... |
453-523 |
3.03e-27 |
|
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation
Pssm-ID: 238130 [Multi-domain] Cd Length: 78 Bit Score: 104.54 E-value: 3.03e-27
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1995764525 453 ILRALGGKENIESLDNCITRLRLVVKDMGLIDQQALKAAGALSVVVLDAHSVQVIIGPQV-QSVKSGIEALI 523
Cdd:cd00212 7 ILEALGGKENIVSLDHCATRLRLTVKDESKVDEAALKKLGGVKGVVKNGGQYQVIIGPGVaDVYKEAIKLLG 78
|
|
| EIIB_glc |
TIGR00826 |
PTS system, glucose-like IIB component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) ... |
416-509 |
5.46e-17 |
|
PTS system, glucose-like IIB component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the E. coli PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-cellobiose (ASC), trehalose (Tre), putative glucoside (Glv) and sucrose (Scr) permeases of E. coli . Most, but not all Scr permeases of other bacteria also lack a IIA domain. This model is specific for the IIB domain of the Glc family PTS transporters. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]
Pssm-ID: 273288 [Multi-domain] Cd Length: 88 Bit Score: 75.86 E-value: 5.46e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 416 LKHDIKTPGREVDAQGALQAVEAntrarGKSKYDHGLILRALGGKENIESLDNCITRLRLVVKDMGLIDQQALKAAGALS 495
Cdd:TIGR00826 1 TRLRLKTPGREKADEEAIAAGEG-----VKGVFTAAGQIQALGGTGNVNKVDACITRLRVGVADVSKVDDAVLKKLGAHG 75
|
90
....*....|....
gi 1995764525 496 VVVLdAHSVQVIIG 509
Cdd:TIGR00826 76 VNPL-QRAVQVISG 88
|
|
| PRK09702 |
PRK09702 |
PTS sugar transporter subunit IIB; |
399-523 |
7.53e-16 |
|
PTS sugar transporter subunit IIB;
Pssm-ID: 77355 [Multi-domain] Cd Length: 161 Bit Score: 75.13 E-value: 7.53e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 399 VGIAWFAIYFFVFRWYILKHDIKTPGREvDAQGALQAVEANTRARG-------KSKYDHGL-ILRALGGKENIESLDNCI 470
Cdd:PRK09702 15 IGLCFTLLYFVVFRTLILQFNMCTPGRE-DAEVKLYSKAEYKASRGqttaaepKKELDQAAgILQALGGVGNISSINNCA 93
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1995764525 471 TRLRLVVKDMG-LIDQQALKAAGALSvVVLDAHSVQVIIGPQVQSVKSGIEALI 523
Cdd:PRK09702 94 TRLRIALHDMSqTLDDEVFKKLGAHG-VFRSGDAIQVIIGLHVSQLREQLDSLI 146
|
|
| PTS_EIIB |
pfam00367 |
phosphotransferase system, EIIB; |
453-482 |
1.10e-13 |
|
phosphotransferase system, EIIB;
Pssm-ID: 459785 [Multi-domain] Cd Length: 32 Bit Score: 64.70 E-value: 1.10e-13
10 20 30
....*....|....*....|....*....|
gi 1995764525 453 ILRALGGKENIESLDNCITRLRLVVKDMGL 482
Cdd:pfam00367 3 ILEALGGKENIKSVDHCATRLRLTVKDESK 32
|
|
| PRK09796 |
PRK09796 |
PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional |
453-523 |
1.66e-07 |
|
PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional
Pssm-ID: 182081 Cd Length: 472 Bit Score: 53.65 E-value: 1.66e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1995764525 453 ILRALGGKENIESLDNCITRLRLVVKDMGLIDQQALKAAGALSVVVLDAHSVQVIIGPQVQSVKSGIEALI 523
Cdd:PRK09796 12 VIAALGGVDNISAVTHCMTRLRFVIKDDALIDSPTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEVVSLL 82
|
|
| murP |
PRK09586 |
PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed |
453-510 |
3.15e-07 |
|
PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed
Pssm-ID: 181971 [Multi-domain] Cd Length: 476 Bit Score: 52.76 E-value: 3.15e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 1995764525 453 ILRALGGKENIESLDNCITRLRLVVKDMGLIDQQALKA-AGALSVVVLDAHsVQVIIGP 510
Cdd:PRK09586 12 ILTRVGGPGNIASCGNCMTRLRLTLHDSSLVDPAAIKTiEGVKGVILSDDQ-VQVVLGP 69
|
|
| PRK14905 |
PRK14905 |
triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; ... |
431-523 |
6.03e-07 |
|
triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; Provisional
Pssm-ID: 184898 [Multi-domain] Cd Length: 355 Bit Score: 51.57 E-value: 6.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995764525 431 GALQAVEANTRARGKSKYDHGLI--LRALGGKENIESLDNCITRLRLVVKDMGLIDQQALKAAGALSVVVLDAHSVQVII 508
Cdd:PRK14905 257 DALKALAGSKIDPIIHKFSEIAIqlIDHLGGKDNISALTHCASRIRVMLRNDGHIDKSAIEKIDCVKGLFSIANQYQIIL 336
|
90
....*....|....*.
gi 1995764525 509 GPQ-VQSVKSGIEALI 523
Cdd:PRK14905 337 GAGiVEKIHEEMKALL 352
|
|
| PRK09824 |
PRK09824 |
PTS system beta-glucoside-specific transporter subunits IIABC; Provisional |
453-515 |
1.43e-06 |
|
PTS system beta-glucoside-specific transporter subunits IIABC; Provisional
Pssm-ID: 236627 [Multi-domain] Cd Length: 627 Bit Score: 50.87 E-value: 1.43e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1995764525 453 ILRALGGKENIESLDNCITRLRLVVKDMGLIDQQALKAAGALSVVVLDAHSVQVIIGPQVQSV 515
Cdd:PRK09824 10 IVAGVGGADNIVSLMHCATRLRFKLKDNSKAQAEVLKKNPGVIMVVESGGQFQVVIGNHVADV 72
|
|
| PRK11007 |
PRK11007 |
PTS system trehalose(maltose)-specific transporter subunits IIBC; Provisional |
457-512 |
1.38e-04 |
|
PTS system trehalose(maltose)-specific transporter subunits IIBC; Provisional
Pssm-ID: 182896 Cd Length: 473 Bit Score: 44.29 E-value: 1.38e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1995764525 457 LGGKENIESLDNCITRLRLVVKDMGLIDQQALKAAGALSVVVLDAHSVQVIIGPQV 512
Cdd:PRK11007 17 VGGRENIATVSHCITRLRFVLNDPANADPKEIEQLPMVKGCFTNAGQFQVVIGTEV 72
|
|
| |
