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Conserved domains on  [gi|2006689222|gb|QTA04375|]
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type III secretion system LEE co-chaperone EscE [Escherichia albertii]

Protein Classification

EscE/YscE/SsaE family type III secretion system needle protein co-chaperone( domain architecture ID 10020795)

EscE/YscE/SsaE family type III secretion system (T3SS) needle protein co-chaperone functions in stabilizing the T3SS needle prior to secretion

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
type_III_yscE TIGR02501
type III secretion system protein, YseE family; Members of this family are found exclusively ...
 4-70 1.10e-18

type III secretion system protein, YseE family; Members of this family are found exclusively in type III secretion appparatus gene clusters in bacteria. Those bacteria with a protein from this family tend to target animal cells, as does Yersinia pestis. This protein is small (about 70 amino acids) and not well characterized. [Cellular processes, Pathogenesis]


:

Pssm-ID: 274167  Cd Length: 67  Bit Score: 71.61  E-value: 1.10e-18
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2006689222  4 ITELEDEIIKNKEAANIFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIRIIEIMLIRIN 70
Cdd:TIGR02501  1 MTQLEDRLSHADTAARAIIEQLEAALAELKEQLSRGGDPQQYQEWQLLADAIEAAIKIIEILTGRYH 67
 
Name Accession Description Interval E-value
type_III_yscE TIGR02501
type III secretion system protein, YseE family; Members of this family are found exclusively ...
 4-70 1.10e-18

type III secretion system protein, YseE family; Members of this family are found exclusively in type III secretion appparatus gene clusters in bacteria. Those bacteria with a protein from this family tend to target animal cells, as does Yersinia pestis. This protein is small (about 70 amino acids) and not well characterized. [Cellular processes, Pathogenesis]


Pssm-ID: 274167  Cd Length: 67  Bit Score: 71.61  E-value: 1.10e-18
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2006689222  4 ITELEDEIIKNKEAANIFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIRIIEIMLIRIN 70
Cdd:TIGR02501  1 MTQLEDRLSHADTAARAIIEQLEAALAELKEQLSRGGDPQQYQEWQLLADAIEAAIKIIEILTGRYH 67
PRK15366 PRK15366
type III secretion system chaperone SsaE; Provisional
 1-71 2.65e-04

type III secretion system chaperone SsaE; Provisional


Pssm-ID: 185264  Cd Length: 80  Bit Score: 35.73  E-value: 2.65e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2006689222  1 MITITELEDEIIKNKEAANIFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIRIIEIMLIRINN 71
Cdd:PRK15366   1 MTTLTRLEDLLLHSREEAKGIILQLRAARKQLEENNGKLQDPQQYQQNTLLLEAIEQAENIINIIYYRYHN 71
 
Name Accession Description Interval E-value
type_III_yscE TIGR02501
type III secretion system protein, YseE family; Members of this family are found exclusively ...
 4-70 1.10e-18

type III secretion system protein, YseE family; Members of this family are found exclusively in type III secretion appparatus gene clusters in bacteria. Those bacteria with a protein from this family tend to target animal cells, as does Yersinia pestis. This protein is small (about 70 amino acids) and not well characterized. [Cellular processes, Pathogenesis]


Pssm-ID: 274167  Cd Length: 67  Bit Score: 71.61  E-value: 1.10e-18
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2006689222  4 ITELEDEIIKNKEAANIFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIRIIEIMLIRIN 70
Cdd:TIGR02501  1 MTQLEDRLSHADTAARAIIEQLEAALAELKEQLSRGGDPQQYQEWQLLADAIEAAIKIIEILTGRYH 67
PRK15366 PRK15366
type III secretion system chaperone SsaE; Provisional
 1-71 2.65e-04

type III secretion system chaperone SsaE; Provisional


Pssm-ID: 185264  Cd Length: 80  Bit Score: 35.73  E-value: 2.65e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2006689222  1 MITITELEDEIIKNKEAANIFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIRIIEIMLIRINN 71
Cdd:PRK15366   1 MTTLTRLEDLLLHSREEAKGIILQLRAARKQLEENNGKLQDPQQYQQNTLLLEAIEQAENIINIIYYRYHN 71
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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