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Conserved domains on  [gi|2029369787|gb|QUE79751|]
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hypothetical protein EML492_17320 [Rhizobium rhizogenes]

Protein Classification

Imm74 domain-containing protein( domain architecture ID 10634752)

Imm74 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Imm74 pfam15603
Immunity protein 74; A predicted immunity protein with an alpha+beta fold. Proteins containing ...
 2-80 5.61e-26

Immunity protein 74; A predicted immunity protein with an alpha+beta fold. Proteins containing this domain are present in bacterial polymorphic toxin systems as an immediate gene neighbour of the toxin gene, which usually contains toxin domains of the Tox-ARC family. This domain is also found in heterogeneous poly-immunity loci.


:

Pssm-ID: 406121  Cd Length: 80  Bit Score: 90.91  E-value: 5.61e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2029369787  2 IFDVSRGHIKVKILDRVATVQGEMFFPGN-NKMGFAVFSDTIKFWDPPDQAVLISGAEKQAILDDIRAEFAKGGHTLEVE 80
Cdd:pfam15603  1 IVGVTEGAIRVEIGGRRLTIQGEMLFPGKeDKADFVVYLDDITEWDAPHESEPITIEERQQIVDAIEKEFTKRGLTVDFE 80
 
Name Accession Description Interval E-value
Imm74 pfam15603
Immunity protein 74; A predicted immunity protein with an alpha+beta fold. Proteins containing ...
 2-80 5.61e-26

Immunity protein 74; A predicted immunity protein with an alpha+beta fold. Proteins containing this domain are present in bacterial polymorphic toxin systems as an immediate gene neighbour of the toxin gene, which usually contains toxin domains of the Tox-ARC family. This domain is also found in heterogeneous poly-immunity loci.


Pssm-ID: 406121  Cd Length: 80  Bit Score: 90.91  E-value: 5.61e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2029369787  2 IFDVSRGHIKVKILDRVATVQGEMFFPGN-NKMGFAVFSDTIKFWDPPDQAVLISGAEKQAILDDIRAEFAKGGHTLEVE 80
Cdd:pfam15603  1 IVGVTEGAIRVEIGGRRLTIQGEMLFPGKeDKADFVVYLDDITEWDAPHESEPITIEERQQIVDAIEKEFTKRGLTVDFE 80
 
Name Accession Description Interval E-value
Imm74 pfam15603
Immunity protein 74; A predicted immunity protein with an alpha+beta fold. Proteins containing ...
 2-80 5.61e-26

Immunity protein 74; A predicted immunity protein with an alpha+beta fold. Proteins containing this domain are present in bacterial polymorphic toxin systems as an immediate gene neighbour of the toxin gene, which usually contains toxin domains of the Tox-ARC family. This domain is also found in heterogeneous poly-immunity loci.


Pssm-ID: 406121  Cd Length: 80  Bit Score: 90.91  E-value: 5.61e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2029369787  2 IFDVSRGHIKVKILDRVATVQGEMFFPGN-NKMGFAVFSDTIKFWDPPDQAVLISGAEKQAILDDIRAEFAKGGHTLEVE 80
Cdd:pfam15603  1 IVGVTEGAIRVEIGGRRLTIQGEMLFPGKeDKADFVVYLDDITEWDAPHESEPITIEERQQIVDAIEKEFTKRGLTVDFE 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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