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Conserved domains on  [gi|2049621024|gb|QWH44653|]
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alpha/beta-type small acid-soluble spore protein [Bacillus toyonensis]

Protein Classification

alpha/beta-type small acid-soluble spore protein( domain architecture ID 10447115)

alpha/beta-type small acid-soluble spore protei is a double-stranded DNA-binding protein that causes DNA to change to an A-like conformation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SspA/SspB/SspC/SspD COG5852
Small acid-soluble spore protein SspA/SspB/SspC/SspD (alpha/beta-type) [Cell cycle control, ...
 1-65 6.87e-29

Small acid-soluble spore protein SspA/SspB/SspC/SspD (alpha/beta-type) [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 444554  Cd Length: 70  Bit Score: 97.20  E-value: 6.87e-29
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2049621024  1 MARNRNSNQLASHGAQAALDQMKYEIAQEFGVQLG-----AETSSRANGSVGGEITKRLVAMAEQQLGGG 65
Cdd:COG5852    1 MANNRNSNKLLVPEARQALDQFKYEIAQELGVQLGqdgywGDLTSRQNGSVGGEMVKRMVQMAEQQLAGG 70
 
Name Accession Description Interval E-value
SspA/SspB/SspC/SspD COG5852
Small acid-soluble spore protein SspA/SspB/SspC/SspD (alpha/beta-type) [Cell cycle control, ...
 1-65 6.87e-29

Small acid-soluble spore protein SspA/SspB/SspC/SspD (alpha/beta-type) [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444554  Cd Length: 70  Bit Score: 97.20  E-value: 6.87e-29
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2049621024  1 MARNRNSNQLASHGAQAALDQMKYEIAQEFGVQLG-----AETSSRANGSVGGEITKRLVAMAEQQLGGG 65
Cdd:COG5852    1 MANNRNSNKLLVPEARQALDQFKYEIAQELGVQLGqdgywGDLTSRQNGSVGGEMVKRMVQMAEQQLAGG 70
SASP pfam00269
Small, acid-soluble spore proteins, alpha/beta type;
14-62 3.89e-21

Small, acid-soluble spore proteins, alpha/beta type;


Pssm-ID: 459739  Cd Length: 58  Bit Score: 77.48  E-value: 3.89e-21
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 2049621024 14 GAQAALDQMKYEIAQEFGVQLGA-----ETSSRANGSVGGEITKRLVAMAEQQL 62
Cdd:pfam00269  5 EAKEALDQFKYEVANELGVPLGKdgyngDLTSRQNGSVGGEMVKKMIEMAEQQL 58
 
Name Accession Description Interval E-value
SspA/SspB/SspC/SspD COG5852
Small acid-soluble spore protein SspA/SspB/SspC/SspD (alpha/beta-type) [Cell cycle control, ...
 1-65 6.87e-29

Small acid-soluble spore protein SspA/SspB/SspC/SspD (alpha/beta-type) [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444554  Cd Length: 70  Bit Score: 97.20  E-value: 6.87e-29
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2049621024  1 MARNRNSNQLASHGAQAALDQMKYEIAQEFGVQLG-----AETSSRANGSVGGEITKRLVAMAEQQLGGG 65
Cdd:COG5852    1 MANNRNSNKLLVPEARQALDQFKYEIAQELGVQLGqdgywGDLTSRQNGSVGGEMVKRMVQMAEQQLAGG 70
SASP pfam00269
Small, acid-soluble spore proteins, alpha/beta type;
14-62 3.89e-21

Small, acid-soluble spore proteins, alpha/beta type;


Pssm-ID: 459739  Cd Length: 58  Bit Score: 77.48  E-value: 3.89e-21
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 2049621024 14 GAQAALDQMKYEIAQEFGVQLGA-----ETSSRANGSVGGEITKRLVAMAEQQL 62
Cdd:pfam00269  5 EAKEALDQFKYEVANELGVPLGKdgyngDLTSRQNGSVGGEMVKKMIEMAEQQL 58
SASP COG5864
Small acid-soluble spore protein SAS2, clostridial type [Cell cycle control, cell division, ...
 17-62 1.24e-06

Small acid-soluble spore protein SAS2, clostridial type [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444566  Cd Length: 67  Bit Score: 41.15  E-value: 1.24e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 2049621024 17 AALDQMKYEIAQEFG-----VQLG-AETSSRANGSVGGEITKRLVAMAEQQL 62
Cdd:COG5864   11 TPLEKLKYEIAEELGlldkvEKEGwGSLTARETGRIGGLMTKRKKRLAEKEL 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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