|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03229 super family |
cl31989 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
753-1055 |
7.90e-07 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
The actual alignment was detected with superfamily member PLN03229:
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 54.86 E-value: 7.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 753 EDYFDKLKREMSEnAKQQTDR--------MLEEYKKEVSQTISEATDVRNIVDNAADiLQAAFADgviTDVEKRLISETL 824
Cdd:PLN03229 435 EGEVEKLKEQILK-AKESSSKpselalneMIEKLKKEIDLEYTEAVIAMGLQERLEN-LREEFSK---ANSQDQLMHPVL 509
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 825 A-QLEKENREFEDKINLALNHPYITEE----DTIELNNSIVEYSSMYETLVISINESVSDKMITPqeseeinqniinfre 899
Cdd:PLN03229 510 MeKIEKLKDEFNKRLSRAPNYLSLKYKldmlNEFSRAKALSEKKSKAEKLKAEINKKFKEVMDRP--------------- 574
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 900 EIKDILSLVEEIIERTKNAQLQATLEEAKDYTTRVRDDIKDELKdlnNSFKSLNSTVEESLQDNIfDAAELEAIKTVVLV 979
Cdd:PLN03229 575 EIKEKMEALKAEVASSGASSGDELDDDLKEKVEKMKKEIELELA---GVLKSMGLEVIGVTKKNK-DTAEQTPPPNLQEK 650
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2071643350 980 TKSEYQDITNRYSSMSANTDLKS---ESKLDLTKSYKTLDTSFNDFVKYIDEMTMDRIADETEKVNYKKKYDTLQKNLS 1055
Cdd:PLN03229 651 IESLNEEINKKIERVIRSSDLKSkieLLKLEVAKASKTPDVTEKEKIEALEQQIKQKIAEALNSSELKEKFEELEAELA 729
|
|
| PblB super family |
cl39146 |
Phage-related protein [Mobilome: prophages, transposons]; |
89-259 |
1.34e-04 |
|
Phage-related protein [Mobilome: prophages, transposons];
The actual alignment was detected with superfamily member COG4926:
Pssm-ID: 443954 [Multi-domain] Cd Length: 438 Bit Score: 46.96 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 89 RDIFVIDDIKKSANDSdfITLNLDSRASELNKKAANEIELLGSTIPQMMNKILS--VYAPLWKlGHVDgkiidvkreLTG 166
Cdd:COG4926 67 NQLFRIYRVTKTMDGT--ITVYAEHIFYDLLDNFIEDTRVTNVTAQTALNDILDgtQYPHPFT-GSSD---------ITT 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 167 SNTT-------VNALID---NICSLFDAVAIYNNinRTISFYHKdnVGTNRGLRVRENSYLKSFEDQFVSKDIVTRLYPF 236
Cdd:COG4926 135 TRSAyvvkknaLEALLGdenSFASRWGGELRFDN--YTVDLLKR--RGRDRGVVIRYRKNLTGLERTVDTTEVVTRIYPY 210
|
170 180
....*....|....*....|...
gi 2071643350 237 GQSGLTIQSvnPAGSSYIEDFSY 259
Cdd:COG4926 211 GKDGITLPE--YIDSPYIEDYPY 231
|
|
| Mplasa_alph_rch super family |
cl37461 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
889-1238 |
2.12e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
The actual alignment was detected with superfamily member TIGR04523:
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.94 E-value: 2.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 889 EINQNIINFREEIKDILSLVEEIieRTKNAQLQATLEEAKDYTTRVRDDI---KDELKDLNNSFKSLNSTVEESLQDNif 965
Cdd:TIGR04523 332 QNNKIISQLNEQISQLKKELTNS--ESENSEKQRELEEKQNEIEKLKKENqsyKQEIKNLESQINDLESKIQNQEKLN-- 407
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 966 daAELEA-IKTVvlvtKSEYQDITNRYSSMSA-NTDLKSESKlDLTKSYKTLDTSFNDFVKYIDEMtmdriadETEKVNY 1043
Cdd:TIGR04523 408 --QQKDEqIKKL----QQEKELLEKEIERLKEtIIKNNSEIK-DLTNQDSVKELIIKNLDNTRESL-------ETQLKVL 473
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 1044 KKKYDTLQKNLSDYMKKYDNCILEISKkysndaadkvlgdFTAIATELQNDFQDVKDNWAEFKQT--------------- 1108
Cdd:TIGR04523 474 SRSINKIKQNLEQKQKELKSKEKELKK-------------LNEEKKELEEKVKDLTKKISSLKEKieklesekkekeski 540
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 1109 -TLESFKDGIVTEAEKARLRVQLDMLDRESMDIEERYKSLLANQYTNTDI-------KNRLTASRSPYLSVHASLRKVIE 1180
Cdd:TIGR04523 541 sDLEDELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELidqkekeKKDLIKEIEEKEKKISSLEKELE 620
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2071643350 1181 QIIADGKVDESEKTLANNSLNTYNTTLTAYSKTIQEALNTLSQIISSDVASK-KVEEFN 1238
Cdd:TIGR04523 621 KAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKtKIDDII 679
|
|
| PRK05771 super family |
cl35381 |
V-type ATP synthase subunit I; Validated |
254-557 |
1.59e-03 |
|
V-type ATP synthase subunit I; Validated
The actual alignment was detected with superfamily member PRK05771:
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 43.76 E-value: 1.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 254 IEDFSYFMSPFK----RDNNRNVLQHSDYMSDELCHALLDYQEFYASKKDQAGELSKQYSAILKEHSQEDF----RLNQL 325
Cdd:PRK05771 33 IEDLKEELSNERlrklRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKeleeEISEL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 326 SATLQRLNERVELVKPkseyidlgtkVKNFKITVpksSYYLimirnDGSFTRIKFnnkqYDIPSGEWLYIKLKTGKFNDA 405
Cdd:PRK05771 113 ENEIKELEQEIERLEP----------WGNFDLDL---SLLL-----GFKYVSVFV----GTVPEDKLEELKLESDVENVE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 406 TKFEKQLEYPLeilsananlrVVYTrssEGDYEEEDTKTIeEKYNLEKYKILVKDQ-EKVVASIERRLKAFEDQKASVIR 484
Cdd:PRK05771 171 YISTDKGYVYV----------VVVV---LKELSDEVEEEL-KKLGFERLELEEEGTpSELIREIKEELEEIEKERESLLE 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 485 SMNAKN--------FLSEKLYNERELYVFESVWTEENHTDAQELYDDaVKQMKEQKKINRTITVDLVnFIQSLDHKDDWD 556
Cdd:PRK05771 237 ELKELAkkyleellALYEYLEIELERAEALSKFLKTDKTFAIEGWVP-EDRVKKLKELIDKATGGSA-YVEFVEPDEEEE 314
|
.
gi 2071643350 557 K 557
Cdd:PRK05771 315 E 315
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
753-1055 |
7.90e-07 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 54.86 E-value: 7.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 753 EDYFDKLKREMSEnAKQQTDR--------MLEEYKKEVSQTISEATDVRNIVDNAADiLQAAFADgviTDVEKRLISETL 824
Cdd:PLN03229 435 EGEVEKLKEQILK-AKESSSKpselalneMIEKLKKEIDLEYTEAVIAMGLQERLEN-LREEFSK---ANSQDQLMHPVL 509
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 825 A-QLEKENREFEDKINLALNHPYITEE----DTIELNNSIVEYSSMYETLVISINESVSDKMITPqeseeinqniinfre 899
Cdd:PLN03229 510 MeKIEKLKDEFNKRLSRAPNYLSLKYKldmlNEFSRAKALSEKKSKAEKLKAEINKKFKEVMDRP--------------- 574
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 900 EIKDILSLVEEIIERTKNAQLQATLEEAKDYTTRVRDDIKDELKdlnNSFKSLNSTVEESLQDNIfDAAELEAIKTVVLV 979
Cdd:PLN03229 575 EIKEKMEALKAEVASSGASSGDELDDDLKEKVEKMKKEIELELA---GVLKSMGLEVIGVTKKNK-DTAEQTPPPNLQEK 650
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2071643350 980 TKSEYQDITNRYSSMSANTDLKS---ESKLDLTKSYKTLDTSFNDFVKYIDEMTMDRIADETEKVNYKKKYDTLQKNLS 1055
Cdd:PLN03229 651 IESLNEEINKKIERVIRSSDLKSkieLLKLEVAKASKTPDVTEKEKIEALEQQIKQKIAEALNSSELKEKFEELEAELA 729
|
|
| PblB |
COG4926 |
Phage-related protein [Mobilome: prophages, transposons]; |
89-259 |
1.34e-04 |
|
Phage-related protein [Mobilome: prophages, transposons];
Pssm-ID: 443954 [Multi-domain] Cd Length: 438 Bit Score: 46.96 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 89 RDIFVIDDIKKSANDSdfITLNLDSRASELNKKAANEIELLGSTIPQMMNKILS--VYAPLWKlGHVDgkiidvkreLTG 166
Cdd:COG4926 67 NQLFRIYRVTKTMDGT--ITVYAEHIFYDLLDNFIEDTRVTNVTAQTALNDILDgtQYPHPFT-GSSD---------ITT 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 167 SNTT-------VNALID---NICSLFDAVAIYNNinRTISFYHKdnVGTNRGLRVRENSYLKSFEDQFVSKDIVTRLYPF 236
Cdd:COG4926 135 TRSAyvvkknaLEALLGdenSFASRWGGELRFDN--YTVDLLKR--RGRDRGVVIRYRKNLTGLERTVDTTEVVTRIYPY 210
|
170 180
....*....|....*....|...
gi 2071643350 237 GQSGLTIQSvnPAGSSYIEDFSY 259
Cdd:COG4926 211 GKDGITLPE--YIDSPYIEDYPY 231
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
889-1238 |
2.12e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.94 E-value: 2.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 889 EINQNIINFREEIKDILSLVEEIieRTKNAQLQATLEEAKDYTTRVRDDI---KDELKDLNNSFKSLNSTVEESLQDNif 965
Cdd:TIGR04523 332 QNNKIISQLNEQISQLKKELTNS--ESENSEKQRELEEKQNEIEKLKKENqsyKQEIKNLESQINDLESKIQNQEKLN-- 407
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 966 daAELEA-IKTVvlvtKSEYQDITNRYSSMSA-NTDLKSESKlDLTKSYKTLDTSFNDFVKYIDEMtmdriadETEKVNY 1043
Cdd:TIGR04523 408 --QQKDEqIKKL----QQEKELLEKEIERLKEtIIKNNSEIK-DLTNQDSVKELIIKNLDNTRESL-------ETQLKVL 473
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 1044 KKKYDTLQKNLSDYMKKYDNCILEISKkysndaadkvlgdFTAIATELQNDFQDVKDNWAEFKQT--------------- 1108
Cdd:TIGR04523 474 SRSINKIKQNLEQKQKELKSKEKELKK-------------LNEEKKELEEKVKDLTKKISSLKEKieklesekkekeski 540
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 1109 -TLESFKDGIVTEAEKARLRVQLDMLDRESMDIEERYKSLLANQYTNTDI-------KNRLTASRSPYLSVHASLRKVIE 1180
Cdd:TIGR04523 541 sDLEDELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELidqkekeKKDLIKEIEEKEKKISSLEKELE 620
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2071643350 1181 QIIADGKVDESEKTLANNSLNTYNTTLTAYSKTIQEALNTLSQIISSDVASK-KVEEFN 1238
Cdd:TIGR04523 621 KAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKtKIDDII 679
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
740-1115 |
4.79e-04 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 45.81 E-value: 4.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 740 NSKNFHLVSNDGEEDYFDKLKREMSENAKQ--QTDRMLEEYKKEVSQTISE--ATDVRNIVDNAADILQAAFADgvITDV 815
Cdd:TIGR01612 1479 NDHDFNINELKEHIDKSKGCKDEADKNAKAieKNKELFEQYKKDVTELLNKysALAIKNKFAKTKKDSEIIIKE--IKDA 1556
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 816 EKRLIsetlaqLEKENREfeDKINLALNHPYITEEDTIELNNS------IVEYSSMYETLVISINESVSDKMITPQESEE 889
Cdd:TIGR01612 1557 HKKFI------LEAEKSE--QKIKEIKKEKFRIEDDAAKNDKSnkaaidIQLSLENFENKFLKISDIKKKINDCLKETES 1628
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 890 INQNIINFREEIKDIlslveEIIERTKNAQ-LQATLEEAKDYTTRVRDDiKDELKDLNNSFKSLNSTVEESLQDniFDAA 968
Cdd:TIGR01612 1629 IEKKISSFSIDSQDT-----ELKENGDNLNsLQEFLESLKDQKKNIEDK-KKELDELDSEIEKIEIDVDQHKKN--YEIG 1700
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 969 ELEAIKTVVLVTKSEYQD--------ITNRYSSMSANtDLKSESKLDLTKSYKT-LDTSFNDFVKYIDEMTMDRIADETE 1039
Cdd:TIGR01612 1701 IIEKIKEIAIANKEEIESikelieptIENLISSFNTN-DLEGIDPNEKLEEYNTeIGDIYEEFIELYNIIAGCLETVSKE 1779
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2071643350 1040 KVNYKKKYDTLQKNLSDYMKkydncILEISKKYSNDAADKVLGDFTAIATELQNDFQDVKDNWAEFKQTTLESFKD 1115
Cdd:TIGR01612 1780 PITYDEIKNTRINAQNEFLK-----IIEIEKKSKSYLDDIEAKEFDRIINHFKKKLDHVNDKFTKEYSKINEGFDD 1850
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
754-1004 |
8.78e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.62 E-value: 8.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 754 DYFDKLKREMSENAKQQTDRMLEEYKKEVSQTISEATDVR---NIVDNAAdilQAAFADGVITDVEKRLI---------S 821
Cdd:COG3206 163 EQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRqknGLVDLSE---EAKLLLQQLSELESQLAearaelaeaE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 822 ETLAQLEKENREFEDKINLALNHPYITEEDTiELNNSIVEYSSMYETLvisinesvsdkmiTPQeseeiNQNIINFREEI 901
Cdd:COG3206 240 ARLAALRAQLGSGPDALPELLQSPVIQQLRA-QLAELEAELAELSARY-------------TPN-----HPDVIALRAQI 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 902 KDILSLVEEIIERTKnAQLQATLEEAKdyttRVRDDIKDELKDLNNSFKSLNSTveeslqdnifdAAELEAIKTVVLVTK 981
Cdd:COG3206 301 AALRAQLQQEAQRIL-ASLEAELEALQ----AREASLQAQLAQLEARLAELPEL-----------EAELRRLEREVEVAR 364
|
250 260
....*....|....*....|...
gi 2071643350 982 SEYQDITNRYSSMSANTDLKSES 1004
Cdd:COG3206 365 ELYESLLQRLEEARLAEALTVGN 387
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
254-557 |
1.59e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 43.76 E-value: 1.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 254 IEDFSYFMSPFK----RDNNRNVLQHSDYMSDELCHALLDYQEFYASKKDQAGELSKQYSAILKEHSQEDF----RLNQL 325
Cdd:PRK05771 33 IEDLKEELSNERlrklRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKeleeEISEL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 326 SATLQRLNERVELVKPkseyidlgtkVKNFKITVpksSYYLimirnDGSFTRIKFnnkqYDIPSGEWLYIKLKTGKFNDA 405
Cdd:PRK05771 113 ENEIKELEQEIERLEP----------WGNFDLDL---SLLL-----GFKYVSVFV----GTVPEDKLEELKLESDVENVE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 406 TKFEKQLEYPLeilsananlrVVYTrssEGDYEEEDTKTIeEKYNLEKYKILVKDQ-EKVVASIERRLKAFEDQKASVIR 484
Cdd:PRK05771 171 YISTDKGYVYV----------VVVV---LKELSDEVEEEL-KKLGFERLELEEEGTpSELIREIKEELEEIEKERESLLE 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 485 SMNAKN--------FLSEKLYNERELYVFESVWTEENHTDAQELYDDaVKQMKEQKKINRTITVDLVnFIQSLDHKDDWD 556
Cdd:PRK05771 237 ELKELAkkyleellALYEYLEIELERAEALSKFLKTDKTFAIEGWVP-EDRVKKLKELIDKATGGSA-YVEFVEPDEEEE 314
|
.
gi 2071643350 557 K 557
Cdd:PRK05771 315 E 315
|
|
| Prophage_tail |
pfam06605 |
Prophage endopeptidase tail; This family is of prophage tail proteins that are probably acting ... |
507-596 |
2.36e-03 |
|
Prophage endopeptidase tail; This family is of prophage tail proteins that are probably acting as endopeptidases.
Pssm-ID: 429028 Cd Length: 253 Bit Score: 42.31 E-value: 2.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 507 SVWTEENHTDAQELYDDAVKQMKEQKKINRTITVDLVNFIQSLDHKDDWdklNVGDKVVFQNKIFNTKIKAYITEMQLD- 585
Cdd:pfam06605 153 DPITDDRFTDPDSLKEYAKEQLQEYSKPDVSLTVTAADLSKLTGEIEDF---ELGDYVRVIDEELGLDVKVRIVGITRYp 229
|
90
....*....|.
gi 2071643350 586 FQTNQVKITIS 596
Cdd:pfam06605 230 FEPWNTELTLG 240
|
|
| DUF3535 |
pfam12054 |
Domain of unknown function (DUF3535); This presumed domain is functionally uncharacterized. ... |
754-812 |
4.08e-03 |
|
Domain of unknown function (DUF3535); This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is typically between 439 to 459 amino acids in length. This domain is found associated with pfam00271, pfam02985, pfam00176. This domain has two completely conserved residues (P and K) that may be functionally important.
Pssm-ID: 463447 Cd Length: 445 Bit Score: 42.23 E-value: 4.08e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 2071643350 754 DYFDKLKREMSENAKQQTDRMLEEYKKEVSQTISEATDVRNIVDNAAdilQAAFADGVI 812
Cdd:pfam12054 250 EDYDKLKKSLSPKQKLLALQQLEDRRRRVQAAIEEAKEAKEQRDVRV---LAAAAGALV 305
|
|
| Prophage_tail |
pfam06605 |
Prophage endopeptidase tail; This family is of prophage tail proteins that are probably acting ... |
148-261 |
5.23e-03 |
|
Prophage endopeptidase tail; This family is of prophage tail proteins that are probably acting as endopeptidases.
Pssm-ID: 429028 Cd Length: 253 Bit Score: 41.15 E-value: 5.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 148 WKLGHVDG-KIIDVKRElTGSNTTvnALIDNICSLFDAVAIYNNiNRTISFYHKdnVGTNRGLRVRENSYLKSFEDQFVS 226
Cdd:pfam06605 37 WEIGTVDSfPSRTVENF-GNNNAL--ELLQQILEDFGGELRFDS-NRHVDIYKL--VGKDTGATFRYGYNLKDIEIETDT 110
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2071643350 227 KDIVTRLYPFGQSGLTIQSVNPAG-----SSYIEDFSYFM 261
Cdd:pfam06605 111 TSLATRIYGYGKDDLTIETINDGKeyledSPAVDKYGISR 150
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
753-1055 |
7.90e-07 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 54.86 E-value: 7.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 753 EDYFDKLKREMSEnAKQQTDR--------MLEEYKKEVSQTISEATDVRNIVDNAADiLQAAFADgviTDVEKRLISETL 824
Cdd:PLN03229 435 EGEVEKLKEQILK-AKESSSKpselalneMIEKLKKEIDLEYTEAVIAMGLQERLEN-LREEFSK---ANSQDQLMHPVL 509
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 825 A-QLEKENREFEDKINLALNHPYITEE----DTIELNNSIVEYSSMYETLVISINESVSDKMITPqeseeinqniinfre 899
Cdd:PLN03229 510 MeKIEKLKDEFNKRLSRAPNYLSLKYKldmlNEFSRAKALSEKKSKAEKLKAEINKKFKEVMDRP--------------- 574
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 900 EIKDILSLVEEIIERTKNAQLQATLEEAKDYTTRVRDDIKDELKdlnNSFKSLNSTVEESLQDNIfDAAELEAIKTVVLV 979
Cdd:PLN03229 575 EIKEKMEALKAEVASSGASSGDELDDDLKEKVEKMKKEIELELA---GVLKSMGLEVIGVTKKNK-DTAEQTPPPNLQEK 650
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2071643350 980 TKSEYQDITNRYSSMSANTDLKS---ESKLDLTKSYKTLDTSFNDFVKYIDEMTMDRIADETEKVNYKKKYDTLQKNLS 1055
Cdd:PLN03229 651 IESLNEEINKKIERVIRSSDLKSkieLLKLEVAKASKTPDVTEKEKIEALEQQIKQKIAEALNSSELKEKFEELEAELA 729
|
|
| PblB |
COG4926 |
Phage-related protein [Mobilome: prophages, transposons]; |
89-259 |
1.34e-04 |
|
Phage-related protein [Mobilome: prophages, transposons];
Pssm-ID: 443954 [Multi-domain] Cd Length: 438 Bit Score: 46.96 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 89 RDIFVIDDIKKSANDSdfITLNLDSRASELNKKAANEIELLGSTIPQMMNKILS--VYAPLWKlGHVDgkiidvkreLTG 166
Cdd:COG4926 67 NQLFRIYRVTKTMDGT--ITVYAEHIFYDLLDNFIEDTRVTNVTAQTALNDILDgtQYPHPFT-GSSD---------ITT 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 167 SNTT-------VNALID---NICSLFDAVAIYNNinRTISFYHKdnVGTNRGLRVRENSYLKSFEDQFVSKDIVTRLYPF 236
Cdd:COG4926 135 TRSAyvvkknaLEALLGdenSFASRWGGELRFDN--YTVDLLKR--RGRDRGVVIRYRKNLTGLERTVDTTEVVTRIYPY 210
|
170 180
....*....|....*....|...
gi 2071643350 237 GQSGLTIQSvnPAGSSYIEDFSY 259
Cdd:COG4926 211 GKDGITLPE--YIDSPYIEDYPY 231
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
889-1238 |
2.12e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.94 E-value: 2.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 889 EINQNIINFREEIKDILSLVEEIieRTKNAQLQATLEEAKDYTTRVRDDI---KDELKDLNNSFKSLNSTVEESLQDNif 965
Cdd:TIGR04523 332 QNNKIISQLNEQISQLKKELTNS--ESENSEKQRELEEKQNEIEKLKKENqsyKQEIKNLESQINDLESKIQNQEKLN-- 407
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 966 daAELEA-IKTVvlvtKSEYQDITNRYSSMSA-NTDLKSESKlDLTKSYKTLDTSFNDFVKYIDEMtmdriadETEKVNY 1043
Cdd:TIGR04523 408 --QQKDEqIKKL----QQEKELLEKEIERLKEtIIKNNSEIK-DLTNQDSVKELIIKNLDNTRESL-------ETQLKVL 473
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 1044 KKKYDTLQKNLSDYMKKYDNCILEISKkysndaadkvlgdFTAIATELQNDFQDVKDNWAEFKQT--------------- 1108
Cdd:TIGR04523 474 SRSINKIKQNLEQKQKELKSKEKELKK-------------LNEEKKELEEKVKDLTKKISSLKEKieklesekkekeski 540
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 1109 -TLESFKDGIVTEAEKARLRVQLDMLDRESMDIEERYKSLLANQYTNTDI-------KNRLTASRSPYLSVHASLRKVIE 1180
Cdd:TIGR04523 541 sDLEDELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELidqkekeKKDLIKEIEEKEKKISSLEKELE 620
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2071643350 1181 QIIADGKVDESEKTLANNSLNTYNTTLTAYSKTIQEALNTLSQIISSDVASK-KVEEFN 1238
Cdd:TIGR04523 621 KAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKtKIDDII 679
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
740-1115 |
4.79e-04 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 45.81 E-value: 4.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 740 NSKNFHLVSNDGEEDYFDKLKREMSENAKQ--QTDRMLEEYKKEVSQTISE--ATDVRNIVDNAADILQAAFADgvITDV 815
Cdd:TIGR01612 1479 NDHDFNINELKEHIDKSKGCKDEADKNAKAieKNKELFEQYKKDVTELLNKysALAIKNKFAKTKKDSEIIIKE--IKDA 1556
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 816 EKRLIsetlaqLEKENREfeDKINLALNHPYITEEDTIELNNS------IVEYSSMYETLVISINESVSDKMITPQESEE 889
Cdd:TIGR01612 1557 HKKFI------LEAEKSE--QKIKEIKKEKFRIEDDAAKNDKSnkaaidIQLSLENFENKFLKISDIKKKINDCLKETES 1628
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 890 INQNIINFREEIKDIlslveEIIERTKNAQ-LQATLEEAKDYTTRVRDDiKDELKDLNNSFKSLNSTVEESLQDniFDAA 968
Cdd:TIGR01612 1629 IEKKISSFSIDSQDT-----ELKENGDNLNsLQEFLESLKDQKKNIEDK-KKELDELDSEIEKIEIDVDQHKKN--YEIG 1700
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 969 ELEAIKTVVLVTKSEYQD--------ITNRYSSMSANtDLKSESKLDLTKSYKT-LDTSFNDFVKYIDEMTMDRIADETE 1039
Cdd:TIGR01612 1701 IIEKIKEIAIANKEEIESikelieptIENLISSFNTN-DLEGIDPNEKLEEYNTeIGDIYEEFIELYNIIAGCLETVSKE 1779
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2071643350 1040 KVNYKKKYDTLQKNLSDYMKkydncILEISKKYSNDAADKVLGDFTAIATELQNDFQDVKDNWAEFKQTTLESFKD 1115
Cdd:TIGR01612 1780 PITYDEIKNTRINAQNEFLK-----IIEIEKKSKSYLDDIEAKEFDRIINHFKKKLDHVNDKFTKEYSKINEGFDD 1850
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
750-1220 |
7.54e-04 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 45.43 E-value: 7.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 750 DGEEDYFDKLKREMSENAKQQTDRmlEEYkkevsqtISEATDVRNIVDNaadilQAAFADGvITDVEKRLISETLaqleK 829
Cdd:TIGR01612 592 DDEIIYINKLKLELKEKIKNISDK--NEY-------IKKAIDLKKIIEN-----NNAYIDE-LAKISPYQVPEHL----K 652
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 830 ENREFEDKINLALNHPYiteEDTIElnnsiveysSMYETLVISINESVSDKMITPQESEEINQNIINFREEIKDILSLVE 909
Cdd:TIGR01612 653 NKDKIYSTIKSELSKIY---EDDID---------ALYNELSSIVKENAIDNTEDKAKLDDLKSKIDKEYDKIQNMETATV 720
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 910 EI----IERTKNAQLQATLEEAKDYTTRVRDDIKDELKDLNNSFKSLNSTVEESLQDNifdaAELEAIKTVVLVTKSEYQ 985
Cdd:TIGR01612 721 ELhlsnIENKKNELLDIIVEIKKHIHGEINKDLNKILEDFKNKEKELSNKINDYAKEK----DELNKYKSKISEIKNHYN 796
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 986 DitnrYSSMSANTDLKSESKLDLTKSY-KTLDTSFNDFVKYIDEMTMDRiADETEKVNykkKYDTLQKNLSDYMKKYDNC 1064
Cdd:TIGR01612 797 D----QINIDNIKDEDAKQNYDKSKEYiKTISIKEDEIFKIINEMKFMK-DDFLNKVD---KFINFENNCKEKIDSEHEQ 868
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 1065 ILEISKKYSNDAADKVLGDFtaiatelQNDFQDVKDNWAEFKQTTLESFKDgiVTEAEKARLRVQLDMLDRESMDiEERY 1144
Cdd:TIGR01612 869 FAELTNKIKAEISDDKLNDY-------EKKFNDSKSLINEINKSIEEEYQN--INTLKKVDEYIKICENTKESIE-KFHN 938
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2071643350 1145 KSLLANQYTNTDIKNRLTASrspylSVHASLRKVIEQIIADgKVDESEKTLANNSLNTY---NTTLTAYSKTIQEALNT 1220
Cdd:TIGR01612 939 KQNILKEILNKNIDTIKESN-----LIEKSYKDKFDNTLID-KINELDKAFKDASLNDYeakNNELIKYFNDLKANLGK 1011
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
754-1004 |
8.78e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.62 E-value: 8.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 754 DYFDKLKREMSENAKQQTDRMLEEYKKEVSQTISEATDVR---NIVDNAAdilQAAFADGVITDVEKRLI---------S 821
Cdd:COG3206 163 EQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRqknGLVDLSE---EAKLLLQQLSELESQLAearaelaeaE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 822 ETLAQLEKENREFEDKINLALNHPYITEEDTiELNNSIVEYSSMYETLvisinesvsdkmiTPQeseeiNQNIINFREEI 901
Cdd:COG3206 240 ARLAALRAQLGSGPDALPELLQSPVIQQLRA-QLAELEAELAELSARY-------------TPN-----HPDVIALRAQI 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 902 KDILSLVEEIIERTKnAQLQATLEEAKdyttRVRDDIKDELKDLNNSFKSLNSTveeslqdnifdAAELEAIKTVVLVTK 981
Cdd:COG3206 301 AALRAQLQQEAQRIL-ASLEAELEALQ----AREASLQAQLAQLEARLAELPEL-----------EAELRRLEREVEVAR 364
|
250 260
....*....|....*....|...
gi 2071643350 982 SEYQDITNRYSSMSANTDLKSES 1004
Cdd:COG3206 365 ELYESLLQRLEEARLAEALTVGN 387
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
254-557 |
1.59e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 43.76 E-value: 1.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 254 IEDFSYFMSPFK----RDNNRNVLQHSDYMSDELCHALLDYQEFYASKKDQAGELSKQYSAILKEHSQEDF----RLNQL 325
Cdd:PRK05771 33 IEDLKEELSNERlrklRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKeleeEISEL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 326 SATLQRLNERVELVKPkseyidlgtkVKNFKITVpksSYYLimirnDGSFTRIKFnnkqYDIPSGEWLYIKLKTGKFNDA 405
Cdd:PRK05771 113 ENEIKELEQEIERLEP----------WGNFDLDL---SLLL-----GFKYVSVFV----GTVPEDKLEELKLESDVENVE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 406 TKFEKQLEYPLeilsananlrVVYTrssEGDYEEEDTKTIeEKYNLEKYKILVKDQ-EKVVASIERRLKAFEDQKASVIR 484
Cdd:PRK05771 171 YISTDKGYVYV----------VVVV---LKELSDEVEEEL-KKLGFERLELEEEGTpSELIREIKEELEEIEKERESLLE 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 485 SMNAKN--------FLSEKLYNERELYVFESVWTEENHTDAQELYDDaVKQMKEQKKINRTITVDLVnFIQSLDHKDDWD 556
Cdd:PRK05771 237 ELKELAkkyleellALYEYLEIELERAEALSKFLKTDKTFAIEGWVP-EDRVKKLKELIDKATGGSA-YVEFVEPDEEEE 314
|
.
gi 2071643350 557 K 557
Cdd:PRK05771 315 E 315
|
|
| Prophage_tail |
pfam06605 |
Prophage endopeptidase tail; This family is of prophage tail proteins that are probably acting ... |
507-596 |
2.36e-03 |
|
Prophage endopeptidase tail; This family is of prophage tail proteins that are probably acting as endopeptidases.
Pssm-ID: 429028 Cd Length: 253 Bit Score: 42.31 E-value: 2.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 507 SVWTEENHTDAQELYDDAVKQMKEQKKINRTITVDLVNFIQSLDHKDDWdklNVGDKVVFQNKIFNTKIKAYITEMQLD- 585
Cdd:pfam06605 153 DPITDDRFTDPDSLKEYAKEQLQEYSKPDVSLTVTAADLSKLTGEIEDF---ELGDYVRVIDEELGLDVKVRIVGITRYp 229
|
90
....*....|.
gi 2071643350 586 FQTNQVKITIS 596
Cdd:pfam06605 230 FEPWNTELTLG 240
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
762-1260 |
2.81e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 43.50 E-value: 2.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 762 EMSENAKQQTDRML-EEYKKEVSQTISEATDVRNIVDNAADILQAAFADGVITDVEKRLiSETLAQLEKENREfedkINL 840
Cdd:TIGR01612 1269 EMDIKAEMETFNIShDDDKDHHIISKKHDENISDIREKSLKIIEDFSEESDINDIKKEL-QKNLLDAQKHNSD----INL 1343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 841 ALNhpyiteedtielnnsivEYSSMYETLVISINESVSDKMitpqesEEINQNIINFREEIKDILSLVEEIIERTKNaql 920
Cdd:TIGR01612 1344 YLN-----------------EIANIYNILKLNKIKKIIDEV------KEYTKEIEENNKNIKDELDKSEKLIKKIKD--- 1397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 921 QATLEEAKDYTTRVRDDikdelKDLNNSFKSLNST-----VEESLQDNIFDAAElEAIKTVVLVTKSeyqditnrySSMS 995
Cdd:TIGR01612 1398 DINLEECKSKIESTLDD-----KDIDECIKKIKELknhilSEESNIDTYFKNAD-ENNENVLLLFKN---------IEMA 1462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 996 ANtdlKSESKLDLTKSYKTLDTSFNdfvkyIDEMTMDRIADETEKVNYKKKYDTLQKNlSDYMKKYDNCILEISKKYSnd 1075
Cdd:TIGR01612 1463 DN---KSQHILKIKKDNATNDHDFN-----INELKEHIDKSKGCKDEADKNAKAIEKN-KELFEQYKKDVTELLNKYS-- 1531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 1076 aadkvlgdftaiATELQNDFQDVKDNwAEFKQTTLESFKDGIVTEAEKARLRVQldMLDRESMDIEERYKSLLANQYTNT 1155
Cdd:TIGR01612 1532 ------------ALAIKNKFAKTKKD-SEIIIKEIKDAHKKFILEAEKSEQKIK--EIKKEKFRIEDDAAKNDKSNKAAI 1596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 1156 DIKNRLTASRSPYLSVhASLRKVIEQIIADgkVDESEKTLANNSLNTYNTTLTAYS---KTIQEALNTL-SQIISSDVAS 1231
Cdd:TIGR01612 1597 DIQLSLENFENKFLKI-SDIKKKINDCLKE--TESIEKKISSFSIDSQDTELKENGdnlNSLQEFLESLkDQKKNIEDKK 1673
|
490 500
....*....|....*....|....*....
gi 2071643350 1232 KKVEEFNGVITTISSDVDTIKKQRDGAVI 1260
Cdd:TIGR01612 1674 KELDELDSEIEKIEIDVDQHKKNYEIGII 1702
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
690-1143 |
3.35e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 42.64 E-value: 3.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 690 NRDNGETFKTGITPEGINAEMLIGKMIVGETLTFE-NESGTVKFDKDGLYvNSKNFHLVSNDGEEdyFDKLKREMSENAK 768
Cdd:COG5185 155 EVETGIIKDIFGKLTQELNQNLKKLEIFGLTLGLLkGISELKKAEPSGTV-NSIKESETGNLGSE--STLLEKAKEIINI 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 769 QQTDRMLEEYKKEVSQTISEATDVRNIVDNAADILQAAFADGviTDVEKRLiSETLAQLEKENREFEDKINLAlnhpyit 848
Cdd:COG5185 232 EEALKGFQDPESELEDLAQTSDKLEKLVEQNTDLRLEKLGEN--AESSKRL-NENANNLIKQFENTKEKIAEY------- 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 849 eEDTIELNNSIVEYS----SMYETLVISINESVSDKMITPQEsEEINQNIINFREEIKDILSLVEEIIERTKNAQLQATL 924
Cdd:COG5185 302 -TKSIDIKKATESLEeqlaAAEAEQELEESKRETETGIQNLT-AEIEQGQESLTENLEAIKEEIENIVGEVELSKSSEEL 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 925 EEAKDYTTRVRDDIKDELKDLNNSFKSLNSTVEESLQDNIFDAAELEaiktvvlvtkseyQDITNRYSSMSANTDLKSES 1004
Cdd:COG5185 380 DSFKDTIESTKESLDEIPQNQRGYAQEILATLEDTLKAADRQIEELQ-------------RQIEQATSSNEEVSKLLNEL 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 1005 KLDLTKSYKTLDTSFNDFVKYIDEMTMDRIADETEKVNykKKYDTLQKNLSDYMKKYDNCILEISKKYSN-----DAADK 1079
Cdd:COG5185 447 ISELNKVMREADEESQSRLEEAYDEINRSVRSKKEDLN--EELTQIESRVSTLKATLEKLRAKLERQLEGvrsklDQVAE 524
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2071643350 1080 VLGDFTAIATELQNDFQDVKDNWAEFKQTTLESFKDGIVTEAEKARLRVQLDMLDRESMDIEER 1143
Cdd:COG5185 525 SLKDFMRARGYAHILALENLIPASELIQASNAKTDGQAANLRTAVIDELTQYLSTIESQQARED 588
|
|
| DUF3535 |
pfam12054 |
Domain of unknown function (DUF3535); This presumed domain is functionally uncharacterized. ... |
754-812 |
4.08e-03 |
|
Domain of unknown function (DUF3535); This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is typically between 439 to 459 amino acids in length. This domain is found associated with pfam00271, pfam02985, pfam00176. This domain has two completely conserved residues (P and K) that may be functionally important.
Pssm-ID: 463447 Cd Length: 445 Bit Score: 42.23 E-value: 4.08e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 2071643350 754 DYFDKLKREMSENAKQQTDRMLEEYKKEVSQTISEATDVRNIVDNAAdilQAAFADGVI 812
Cdd:pfam12054 250 EDYDKLKKSLSPKQKLLALQQLEDRRRRVQAAIEEAKEAKEQRDVRV---LAAAAGALV 305
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
757-953 |
4.69e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.59 E-value: 4.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 757 DKLKREMSENAKQQTDrmLEEYKKEVSQTISEATDVRNIVDNAAdiLQAAFADGVITDVEKRL---ISETLAQLEKENRE 833
Cdd:COG4913 709 DELKGEIGRLEKELEQ--AEEELDELQDRLEAAEDLARLELRAL--LEERFAAALGDAVERELrenLEERIDALRARLNR 784
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 834 FEDKINLALNH-----PYITEEDTIELNnSIVEYSSMYETLVisinesvsdkmitpqeseeiNQNIINFREEIKDILSlv 908
Cdd:COG4913 785 AEEELERAMRAfnrewPAETADLDADLE-SLPEYLALLDRLE--------------------EDGLPEYEERFKELLN-- 841
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2071643350 909 eeiiERTKN--AQLQATLEEAkdyttrvRDDIKDELKDLNNSFKSLN 953
Cdd:COG4913 842 ----ENSIEfvADLLSKLRRA-------IREIKERIDPLNDSLKRIP 877
|
|
| Prophage_tail |
pfam06605 |
Prophage endopeptidase tail; This family is of prophage tail proteins that are probably acting ... |
148-261 |
5.23e-03 |
|
Prophage endopeptidase tail; This family is of prophage tail proteins that are probably acting as endopeptidases.
Pssm-ID: 429028 Cd Length: 253 Bit Score: 41.15 E-value: 5.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 148 WKLGHVDG-KIIDVKRElTGSNTTvnALIDNICSLFDAVAIYNNiNRTISFYHKdnVGTNRGLRVRENSYLKSFEDQFVS 226
Cdd:pfam06605 37 WEIGTVDSfPSRTVENF-GNNNAL--ELLQQILEDFGGELRFDS-NRHVDIYKL--VGKDTGATFRYGYNLKDIEIETDT 110
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2071643350 227 KDIVTRLYPFGQSGLTIQSVNPAG-----SSYIEDFSYFM 261
Cdd:pfam06605 111 TSLATRIYGYGKDDLTIETINDGKeyledSPAVDKYGISR 150
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
756-1256 |
5.89e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 42.35 E-value: 5.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 756 FDKLKREMSENAKQQTDRMLEEYkkevsQTISEATDVRNIVDNAA-DILQAAFAD--GVITDVEKRLISETLAQLEKENR 832
Cdd:TIGR01612 658 YSTIKSELSKIYEDDIDALYNEL-----SSIVKENAIDNTEDKAKlDDLKSKIDKeyDKIQNMETATVELHLSNIENKKN 732
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 833 EFEDKInlALNHPYITEEDTIELNNSIVEYSSMYETLVISINEsvsdkmiTPQESEEINQniinFREEIKDILSLVEE-- 910
Cdd:TIGR01612 733 ELLDII--VEIKKHIHGEINKDLNKILEDFKNKEKELSNKIND-------YAKEKDELNK----YKSKISEIKNHYNDqi 799
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 911 IIERTKNAQLQATLEEAKDY--TTRVRDD-----------IKDELKDLNNSFKSLNSTVEESLQDNIFDAAEL-EAIKTV 976
Cdd:TIGR01612 800 NIDNIKDEDAKQNYDKSKEYikTISIKEDeifkiinemkfMKDDFLNKVDKFINFENNCKEKIDSEHEQFAELtNKIKAE 879
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 977 VLVTK-SEYQDITNRYSSmsantdLKSESKLDLTKSYKTLDT--SFNDFVKYIDEMT--MDRIADETEKVNYK--KKYDT 1049
Cdd:TIGR01612 880 ISDDKlNDYEKKFNDSKS------LINEINKSIEEEYQNINTlkKVDEYIKICENTKesIEKFHNKQNILKEIlnKNIDT 953
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 1050 LQKNLS---DYMKKYDNCILEISKKYSNDAADKVLGDFTAIATELQNDFQDVKDNWAEFKQTTLESfkdgivteaekarl 1126
Cdd:TIGR01612 954 IKESNLiekSYKDKFDNTLIDKINELDKAFKDASLNDYEAKNNELIKYFNDLKANLGKNKENMLYH-------------- 1019
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2071643350 1127 rvQLDMLDRESMDIEERYKSLlanqytNTDIKNrltasrsPYLSVHASLRKVIEQIiaDGKVDESEKTLANNSLNTYNTT 1206
Cdd:TIGR01612 1020 --QFDEKEKATNDIEQKIEDA------NKNIPN-------IEIAIHTSIYNIIDEI--EKEIGKNIELLNKEILEEAEIN 1082
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 2071643350 1207 LTAYSKtIQEALNTLSqiiSSDVASKKVEEFNGVITTISSDVDTIKKQRD 1256
Cdd:TIGR01612 1083 ITNFNE-IKEKLKHYN---FDDFGKEENIKYADEINKIKDDIKNLDQKID 1128
|
|
| |
