|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-380 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 639.64 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 1 MTHQLRKSHPLLKLMNHSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLI 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 81 RSLHANGASLFFLCIFLHIGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNS 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 161 IVAWIWGGPSVSSATLTRFTTLHFLLPFILMAAVITHLIFLHERGSFNPLGLTPNADKIPFHPYFSTKDAMGMILATTLL 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 241 LTLALYLPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAMFMSILVLLLLPALHTSKRQSMSLRP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 321 LSQLLFWTLIADFSILTWIGGQPVQDPYILIGQMASSLYFSTILILLPLAGMIENLMIKP 380
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
10-382 |
4.61e-116 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 343.70 E-value: 4.61e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 10 PLLKLMNHSLvDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLIRSLHANGAS 89
Cdd:COG1290 19 PLASLVREHL-EYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 90 LFFLCIFLHIGRGLYYGSYL--HENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNSIVAWIWG 167
Cdd:COG1290 98 LFFAAVYLHMFRGFFYGAYKkpRELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 168 GPSVSSATLTRFTTLH-FLLPFILMAAVITHLIFLHERGSFNPLG----LTPNADKIPFHPYFSTKDAMGMILATTLLLT 242
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 243 LALYLPNllGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIP--NKLTGVIAMFMSILVLLLLPALHTSKRQSMSLRP 320
Cdd:COG1290 258 LAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2072688013 321 LSQLLFWTLIADFSILTWIGGQPvqDPYILIGQMASSLYFSTILILLPLAGMIENLmiKPLQ 382
Cdd:COG1290 336 VRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLIVLPILAFIEKT--KPLP 393
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-206 |
2.51e-82 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 250.36 E-value: 2.51e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 10 PLLKLMNHSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLIRSLHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 90 LFFLCIFLHIGRGLYYGSY--LHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNSIVAWIWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190
....*....|....*....|....*....|....*....
gi 2072688013 168 GPSVSSATLTRFTTLHFLLPFILMAAVITHLIFLHERGS 206
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGS 199
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
3.92e-74 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 229.19 E-value: 3.92e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 19 LVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLIRSLHANGASLFFLCIFLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 99 IGRGLYYG--SYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNSIVAWIWGGPSVSSATL 176
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2072688013 177 TRFTTLHFLLPFILMAAVITHLIFLHERG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
259-295 |
2.72e-07 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 49.80 E-value: 2.72e-07
10 20 30
....*....|....*....|....*....|....*..
gi 2072688013 259 PADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAM 295
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLM 101
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-380 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 639.64 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 1 MTHQLRKSHPLLKLMNHSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLI 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 81 RSLHANGASLFFLCIFLHIGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNS 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 161 IVAWIWGGPSVSSATLTRFTTLHFLLPFILMAAVITHLIFLHERGSFNPLGLTPNADKIPFHPYFSTKDAMGMILATTLL 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 241 LTLALYLPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAMFMSILVLLLLPALHTSKRQSMSLRP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 321 LSQLLFWTLIADFSILTWIGGQPVQDPYILIGQMASSLYFSTILILLPLAGMIENLMIKP 380
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 582.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 1 MTHqLRKSHPLLKLMNHSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLI 80
Cdd:MTH00100 1 MTN-IRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWII 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 81 RSLHANGASLFFLCIFLHIGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNS 160
Cdd:MTH00100 80 RYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 161 IVAWIWGGPSVSSATLTRFTTLHFLLPFILMAAVITHLIFLHERGSFNPLGLTPNADKIPFHPYFSTKDAMGMILATTLL 240
Cdd:MTH00100 160 LVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 241 LTLALYLPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAMFMSILVLLLLPALHTSKRQSMSLRP 320
Cdd:MTH00100 240 MLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRP 319
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2072688013 321 LSQLLFWTLIADFSILTWIGGQPVQDPYILIGQMASSLYFSTILILLPLAGMIENLMIK 379
Cdd:MTH00100 320 LSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLK 378
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 573.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 5 LRKSHPLLKLMNHSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLIRSLH 84
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 85 ANGASLFFLCIFLHIGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNSIVAW 164
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 165 IWGGPSVSSATLTRFTTLHFLLPFILMAAVITHLIFLHERGSFNPLGLTPNADKIPFHPYFSTKDAMGMILATTLLLTLA 244
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 245 LYLPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAMFMSILVLLLLPALHTSKRQSMSLRPLSQL 324
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2072688013 325 LFWTLIADFSILTWIGGQPVQDPYILIGQMASSLYFSTILILLPLAGMIENLMIK 379
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALE 378
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 564.69 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 1 MTHQLRKSHPLLKLMNHSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLI 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 81 RSLHANGASLFFLCIFLHIGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNS 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 161 IVAWIWGGPSVSSATLTRFTTLHFLLPFILMAAVITHLIFLHERGSFNPLGLTPNADKIPFHPYFSTKDAMGMILATTLL 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 241 LTLALYLPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAMFMSILVLLLLPALHTSKRQSMSLRP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2072688013 321 LSQLLFWTLIADFSILTWIGGQPVQDPYILIGQMASSLYFSTILILLPLAGMIENLMIK 379
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLK 379
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-369 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 549.90 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 5 LRKSHPLLKLMNHSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLIRSLH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 85 ANGASLFFLCIFLHIGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNSIVAW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 165 IWGGPSVSSATLTRFTTLHFLLPFILMAAVITHLIFLHERGSFNPLGLTPNADKIPFHPYFSTKDAMGMILATTLLLTLA 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 245 LYLPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAMFMSILVLLLLPALHTSKRQSMSLRPLSQL 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2072688013 325 LFWTLIADFSILTWIGGQPVQDPYILIGQMASSLYFSTILILLPL 369
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 537.06 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 12 LKLMNHSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLIRSLHANGASLF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 92 FLCIFLHIGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNSIVAWIWGGPSV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 172 SSATLTRFTTLHFLLPFILMAAVITHLIFLHERGSFNPLGLTPNADKIPFHPYFSTKDAMGMILATTLLLTLALYLPNLL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 252 GDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAMFMSILVLLLLPALHTSKRQSMSLRPLSQLLFWTLIA 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 2072688013 332 DFSILTWIGGQPVQDPYILIGQMASSLYFSTILIL 366
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 534.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 1 MTHQLRKSHPLLKLMNHSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLI 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 81 RSLHANGASLFFLCIFLHIGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNS 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 161 IVAWIWGGPSVSSATLTRFTTLHFLLPFILMAAVITHLIFLHERGSFNPLGLTPNADKIPFHPYFSTKDAMGMILATTLL 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 241 LTLALYLPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAMFMSILVLLLLPALHTSKRQSMSLRP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2072688013 321 LSQLLFWTLIADFSILTWIGGQPVQDPYILIGQMASSLYFStILILLPLAGMIENLMI 378
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFL-FFLILPLVQKLWDNIL 377
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
5-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 524.66 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 5 LRKSHPLLKLMNHSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLIRSLH 84
Cdd:MTH00034 4 LRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 85 ANGASLFFLCIFLHIGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNSIVAW 164
Cdd:MTH00034 84 ANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 165 IWGGPSVSSATLTRFTTLHFLLPFILMAAVITHLIFLHERGSFNPLGLTPNADKIPFHPYFSTKDAMGMILATTLLLTLA 244
Cdd:MTH00034 164 IWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 245 LYLPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAMFMSILVLLLLPALHTSKRQSMSLRPLSQL 324
Cdd:MTH00034 244 LLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQI 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2072688013 325 LFWTLIADFSILTWIGGQPVQDPYILIGQMASSLYFSTILILLPLAGMIENLMI 378
Cdd:MTH00034 324 AFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLI 377
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-379 |
1.95e-176 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 496.51 E-value: 1.95e-176
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 1 MTHQLRKSHPLLKLMNHSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLI 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 81 RSLHANGASLFFLCIFLHIGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNS 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 161 IVAWIWGGPSVSSATLTRFTTLHFLLPFILMAAVITHLIFLHERGSFNPLGLTPNADKIPFHPYFSTKDAMGMILATTLL 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 241 LTLALYLPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAMFMSILVLLLLPALHTSKRQSMSLRP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2072688013 321 LSQLLFWTLIADFSILTWIGGQPVQDPYILIGQMASSLYFStILILLPLAGMIENLMIK 379
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFF-YFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-379 |
1.73e-171 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 483.82 E-value: 1.73e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 1 MTHQLRKSHPLLKLMNHSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLI 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 81 RSLHANGASLFFLCIFLHIGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNS 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 161 IVAWIWGGPSVSSATLTRFTTLHFLLPFILMAAVITHLIFLHERGSFNPLGLTPNADKIPFHPYFSTKDAMGMILATTLL 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 241 LTLALYLPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAMFMSILVLLLLPALHTSKRQSMSLRP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2072688013 321 LSQLLFWTLIADFSILTWIGGQPVQDPYILIGQMASSLYFSTILILLPLAGMIENLMIK 379
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLK 379
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-380 |
3.20e-169 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 478.04 E-value: 3.20e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 4 QLRKSHPLLKLMNHSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLIRSL 83
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 84 HANGASLFFLCIFLHIGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNSIVA 163
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 164 WIWGGPSVSSATLTRFTTLHFLLPFILMAAVITHLIFLHERGSFNPLGLTPNADKIPFHPYFSTKDAMGMILATTLLLTL 243
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 244 ALYLPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAMFMSILVLLLLPALHTSKRQSMSLRPLSQ 323
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2072688013 324 LLFWTLIADFSILTWIGGQPVQDPYILIGQMASSLYFSTILILLPLAGMIENLMIKP 380
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLFK 378
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-379 |
5.88e-155 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 442.05 E-value: 5.88e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 1 MTHQLRKSHPLLKLMNHSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLI 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 81 RSLHANGASLFFLCIFLHIGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNS 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 161 IVAWIWGGPSVSSATLTRFTTLHFLLPFILMAAVITHLIFLHERGSFNPLGLTPNADKIPFHPYFSTKDAMGMILATTLL 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 241 LTLALYLPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAMFMSILVLLLLPALHTSKRQSMSLRP 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2072688013 321 LSQLLFWTLIADFSILTWIGGQPVQDPYILIGQMASSLYFsTILILLPLAGMIENLMIK 379
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYF-SYFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
17-376 |
2.87e-126 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 369.27 E-value: 2.87e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 17 HSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLIRSLHANGASLFFLCIF 96
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 97 LHIGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNSIVAWIWGGPSVSSATL 176
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 177 TRFTTLHFLLPFILMAAVITHLIFLHERGSFNPLGLTPNADKIPFHPYFSTKDAMGMILATTLLLTLALY--LPNLLGDP 254
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEprIETLLQDP 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 255 ENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAMFMSILVLLLLPALHTSKRQSMSLRPLSQLLFWTLIADFS 334
Cdd:MTH00033 253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2072688013 335 ILTWIGGQPV-QDPYILIGQMASSLYFSTILILLPLAGMIENL 376
Cdd:MTH00033 333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSNL 375
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
10-382 |
4.61e-116 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 343.70 E-value: 4.61e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 10 PLLKLMNHSLvDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLIRSLHANGAS 89
Cdd:COG1290 19 PLASLVREHL-EYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 90 LFFLCIFLHIGRGLYYGSYL--HENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNSIVAWIWG 167
Cdd:COG1290 98 LFFAAVYLHMFRGFFYGAYKkpRELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 168 GPSVSSATLTRFTTLH-FLLPFILMAAVITHLIFLHERGSFNPLG----LTPNADKIPFHPYFSTKDAMGMILATTLLLT 242
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 243 LALYLPNllGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIP--NKLTGVIAMFMSILVLLLLPALHTSKRQSMSLRP 320
Cdd:COG1290 258 LAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2072688013 321 LSQLLFWTLIADFSILTWIGGQPvqDPYILIGQMASSLYFSTILILLPLAGMIENLmiKPLQ 382
Cdd:COG1290 336 VRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLIVLPILAFIEKT--KPLP 393
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
15-367 |
7.90e-113 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 333.83 E-value: 7.90e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 15 MNHSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLIRSLHANGASLFFLC 94
Cdd:MTH00086 3 VNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 95 IFLHIGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNSIVAWIWGGPSVSSA 174
Cdd:MTH00086 83 LYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 175 TLTRFTTLHFLLPFILMAAVITHLIFLHERGSFNPLGLTPNADKIPFHPYFSTKDAMGMIlATTLLLTLALYLPNLLGDP 254
Cdd:MTH00086 163 TLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNII-FWLVFIIFSLFYPFNLGDP 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 255 ENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAMFMSILVLLLLPALHTSkrqSMSLRPLSQLLFWTLIADFS 334
Cdd:MTH00086 242 EMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNV 318
|
330 340 350
....*....|....*....|....*....|...
gi 2072688013 335 ILTWIGGQPVQDPYILIGQMASSLYFSTILILL 367
Cdd:MTH00086 319 ILSWLGQCLVEYPFLFLSQIFSFIYFFLILLML 351
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-206 |
2.51e-82 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 250.36 E-value: 2.51e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 10 PLLKLMNHSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLIRSLHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 90 LFFLCIFLHIGRGLYYGSY--LHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNSIVAWIWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190
....*....|....*....|....*....|....*....
gi 2072688013 168 GPSVSSATLTRFTTLHFLLPFILMAAVITHLIFLHERGS 206
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGS 199
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
11-356 |
5.43e-79 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 247.20 E-value: 5.43e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 11 LLKLMNHSLVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLIRSLHANGASL 90
Cdd:MTH00046 1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 91 FFLCIFLHIGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNSIVAWIWGGPS 170
Cdd:MTH00046 81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 171 VSSATLTRFTTLHFLLPFILMAAVITHLIFLHERGSFNPLGLTPN-ADKIPFHPYFSTKDAMGMILATTLLLTLALYLPN 249
Cdd:MTH00046 161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 250 LLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIaMFMSILVLLLLPALHTSKRQSMSlrplSQLLFWTL 329
Cdd:MTH00046 241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVPTFNGSSVYSVW----RQVNFWLI 315
|
330 340
....*....|....*....|....*..
gi 2072688013 330 IADFSILTWIGGQPVQDPYILIGQMAS 356
Cdd:MTH00046 316 VSLFFSLSYLGGCHPEYPYLLISQLFS 342
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
3.92e-74 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 229.19 E-value: 3.92e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 19 LVDLPTPSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLIRSLHANGASLFFLCIFLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 99 IGRGLYYG--SYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNSIVAWIWGGPSVSSATL 176
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2072688013 177 TRFTTLHFLLPFILMAAVITHLIFLHERG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-355 |
1.61e-43 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 148.56 E-value: 1.61e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 208 NPLGLTPNADKIPFHPYFSTKDAMGMILATTLLLTLALYLPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072688013 288 KLTGVIAMFMSILVLLLLPALHTSKRQSMSlRPLSQLLFWTLIADFSILTWIGGQPVQDPYILIGQMA 355
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRSQF-RPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
259-359 |
5.25e-38 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 132.60 E-value: 5.25e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 259 PADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAMFMSILVLLLLPALHTSKRQSMSLRPLSQLLFWTLIADFSILTW 338
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 2072688013 339 IGGQPVQDPYILIGQMASSLY 359
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
89-254 |
7.68e-38 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 134.29 E-value: 7.68e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 89 SLFFLCIFLHIGRGLYYGSYL--HENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNSIVAWIW 166
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRkpRELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 167 GGPSVSSATLTRFTTLHF-LLPFILMAAVITHLIFLHERGSFNPLGLTPNADKIPFHPYFSTKDAMGMILATTLLLTLAL 245
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 2072688013 246 YLPNLLGDP 254
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
34-210 |
1.94e-34 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 127.14 E-value: 1.94e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 34 FGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLIRSLHANGASLFFLCIFLHIGRGLYYGSYL--HE 111
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKkpRE 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 112 NTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNSIVAWIWGGPSVSSATLTRFTTLH-FLLPFIL 190
Cdd:PRK03735 124 LNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 2072688013 191 MAAVITHLIFLHERGSFNPL 210
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
25-210 |
5.67e-29 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 112.12 E-value: 5.67e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 25 PSNISYWWNFGSLLGFTLLIQLTSGILLMMHFLADDTLAFTSVAYTSREVWYGWLIRSLHANGASLFFLCIFLHIGRGLY 104
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072688013 105 YGSYL--HENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGNSIVAWIWGGPSVSSATLTRFTTL 182
Cdd:CHL00070 107 TGGFKkpRELTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 2072688013 183 H-FLLPFILMAAVITHLIFLHERGSFNPL 210
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
259-295 |
7.68e-09 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 54.41 E-value: 7.68e-09
10 20 30
....*....|....*....|....*....|....*..
gi 2072688013 259 PADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAM 295
Cdd:COG5679 66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMM 102
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
259-295 |
1.31e-08 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 53.85 E-value: 1.31e-08
10 20 30
....*....|....*....|....*....|....*..
gi 2072688013 259 PADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAM 295
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLM 101
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
259-295 |
2.72e-07 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 49.80 E-value: 2.72e-07
10 20 30
....*....|....*....|....*....|....*..
gi 2072688013 259 PADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVIAM 295
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLM 101
|
|
| |
