|
Name |
Accession |
Description |
Interval |
E-value |
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
1-746 |
0e+00 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 1465.25 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 1 MNKKIHSLALLVNLGIYGVAQAQEPT-----DTPVSHDDTIVVTAAEQNLQAPGVSTITADEIRKNPVARDVSEIIRTMP 75
Cdd:PRK13524 1 MNKKIHSLALLVNLGIYGVAQAAEAEdaktdDTPASHEDTIVVTAAEQNLQAPGVSTITAEDIRKRPPANDVSEIIRTMP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 76 GVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVSSRNSVRQGWRGERDTRGDTSWVPPEMIERIEVLRGPAAARY 155
Cdd:PRK13524 81 GVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVSSRNSVRYGWRGERDTRGDTNWVPPEMIERIEVLRGPAAARY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 156 GNGAAGGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPLGDEFSFRLYGNLDKTQADAWDINQGHQSAR 235
Cdd:PRK13524 161 GNGAAGGVVNIITKKPTGEWHGSWNTYFNAPEHKAEGATKRTNFSLSGPLGDELSFRLYGNLNKTQADAWDINQGHQSAR 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 236 AGTYATTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNSDSYTRSKYGDETNRLYRQNYSLTW 315
Cdd:PRK13524 241 TGSYAGTLPAGREGVINKDINGLLRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNSDALVKSLYGKETNRMYRQNYALTH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 316 NGGWDNGVTTSNWVQYEHTRNSRIPEGLAGGTEGKFNEKATQdFVDIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWNQQR 395
Cdd:PRK13524 321 RGGWDNGVSTSNYAQYEHTRNSRLPEGLAGGTEGIFNEKATQ-FSTIDLDDVMLHSEVNLPFDLLVNQTLTLGTEWNQQR 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 396 MKDLSSNTQALTgtnTGGAIDGVSATDRSPYSKAEIFSLFAENNMELTDSTIVTPGLRFDHHSIVGNNWSPALNISQGLG 475
Cdd:PRK13524 400 MKDPSSNTQALT---SGGAIPGVSATGRSPYSKAEIFSLFAEDNMELTDSTMLTPGLRFDHHSIVGNNWSPSLNLSQGLG 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 476 DDFTLKMGIARAYKAPSLYQTNPNYILYSKGQGCYASA-GGCYLQGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDY 554
Cdd:PRK13524 477 DDFTLKMGIARAYKAPNLYQTNPNYILYSKGQGCYASAgNGCYLQGNDDLKAETSVNKEIGLEFKRDGWLAGLTWFRNDY 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 555 RNKIEAGYVAVGQNAVG-TDLYQWDNVPKAVVEGLEGSLNVPVSETVMWTNNITYMLKSENKTTGDRLSIIPEYTLNSTL 633
Cdd:PRK13524 557 RNKIEAGYVPVGTNSVGkTDIYQWENVPKAVVEGLEGTLNVPVSETVNWTNNLTYMLQSKNKTTGDPLSIIPEYTLNSTL 636
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 634 SWQAREDLSMQTTFTWYGKQQPKKYNYKGQPAVGPETKEISPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWRAGNAQT 713
Cdd:PRK13524 637 SWQATEDLSLQSTFTWYGKQKPKKYNYKGQPVTGSATKEVSPYSIVGLSATYDVTKNVSLTGGVDNLFDKRLWREGNAQT 716
|
730 740 750
....*....|....*....|....*....|...
gi 1425613064 714 TGdlagaNYIAGAGAYTYNEPGRTWYMSINTHF 746
Cdd:PRK13524 717 TG-----DLIAGAGAYTYNEPGRTYYMSLNTHF 744
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
2-746 |
0e+00 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 991.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 2 NKKIHSLALLVNLGIYGVAQAQEPTDTPVshDDTIVVTAAEQNL-QAPGVSTITADEIRKNPVARDVSEIIRTMPGVNLT 80
Cdd:PRK13528 6 NKILWLLTVLLVGLNSPVSAAESSDDDNG--ETMVVEATAEQELkQQPGVSIITAEDIKKRPPVNDLSDIIRKMPGVNLT 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 81 GNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVSSRNSVRQGWRGERDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAA 160
Cdd:PRK13528 84 GNSASGTRGNNRQIDIRGMGPENTLILIDGVPVTSRNSVRYSWRGERDTRGDTNWVPPEMVERIEVIRGPAAARYGSGAA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 161 GGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPL-GDEFSFRLYGNLDKTQADAWDINQGHqsaragty 239
Cdd:PRK13528 164 GGVVNIITKRPTNDWHGSLSLYTNQPESSKEGATRRANFSLSGPLaGDALTMRLYGNLNKTDADSWDINSSA-------- 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 240 ATTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNSDSYTRS--KYGDETNRLYRQNYSLTWNG 317
Cdd:PRK13528 236 GTKNAAGREGVRNKDINGVLSWKMTPQQILDFEAGYSRQGNIYAGDTQNSNSSAVTESlaKSGKETNRLYRQNYGLTHNG 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 318 GWDNGvTTSNWVQYEHTRNSRIPEGLAGGTEGKFNekATQDFVDIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWNQQRMK 397
Cdd:PRK13528 316 IWDWG-QSRLGFYYEKTNNTRMNEGLAGGGEGRIT--ADQTFTTSRLESYRTSGELNVPLNWLFEQTLTVGAEWNRDELN 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 398 DLSSNTQaltgTNTGGAIDGVS--ATDRSPYSKAEIFSLFAENNMELTDSTIVTPGLRFDHHSIVGNNWSPALNISQGLG 475
Cdd:PRK13528 393 DPSSTSL----TVKDGDIGGISgsAADRSSKNKSEISALYVEDNIEPVPGTNLIPGLRFDYHSEFGSNWSPSLNLSQELG 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 476 DDFTLKMGIARAYKAPSLYQTNPNYILYSKGQGCYAS--AGGCYLQGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRND 553
Cdd:PRK13528 469 DYFKVKAGIARAFKAPNLYQSSEGYLLYSRGNGCPKDitSGGCYLVGNKNLDPEISVNKEIGLEFTVDDYHASVTYFRND 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 554 YRNKIEAGYVAVGQNAVGTDLYQWDNVPKAVVEGLEGSLNVPV-SETVMWTNNITYMLKSENKTTGDRLSIIPEYTLNST 632
Cdd:PRK13528 549 YQNKIVAGDDVIGRTASGAYILQWQNGGKAVVEGLEGNLLVPLmKDRLNWNTNATYMITSEQKDTGNPLSVIPKYTINST 628
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 633 LSWQAREDLSMQTTFTWYGKQQPKKYN-YKGQPAVGPETKEISPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWRAGNa 711
Cdd:PRK13528 629 LDWQITQALSANVNWTLYGKQKPRTHAeSRSEETGGLSGKELGAYSLVGVNVNYDINKNLRLNVGVSNLFDKQIYREGE- 707
|
730 740 750
....*....|....*....|....*....|....*
gi 1425613064 712 qttgdlaganyiagaGAYTYNEPGRTWYMSINTHF 746
Cdd:PRK13528 708 ---------------GANTYNEPGRAYYAGVTASF 727
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
50-746 |
1.58e-145 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 440.70 E-value: 1.58e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 50 VSTITADEIRKNPvARDVSEIIRTMPGVNLTGNSTSGQRGNnrqIDIRGMGPEntlILIDGkpvSSRNSVRQGWRGerdt 129
Cdd:TIGR01783 6 VSVITRQELEDQQ-AGSLSEALQRVPGVVVGGSGGTTQFGN---ITIRGFGLE---VDIDN---VYLDGVPLLSRG---- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 130 rgDTSWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGSGEwhgswdAYFNAPEHKEEGATKRTNFSLTGPLGDEF 209
Cdd:TIGR01783 72 --NLAIVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDE------PKGSVTFGAGTRSGYRTAFDLGGPLGADG 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 210 SFRLYGNLDKTQADAWDINQGHQSaRAGTYATTLPAgrEGVINKDINGVVRWDFAPLQSLELEA-----GYSRQGNLYAG 284
Cdd:TIGR01783 144 TFRGRLNGARQDGDSFYDGAGEET-RLGATATDWQL--DDRTLLRLGAYYQKERDRGGYGGLPAsggtsGRDLSSDRYLG 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 285 DTQNTNSDSYTRSKYGDETNRLYRQNYSLTWNGGWDNGVTTSNWVQYEHTRNSripEGLAGGTEGKFNEKatQDFVDIDL 364
Cdd:TIGR01783 221 TSSNRNYDDREYLSYGLSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSD---GGLFGRSLTVVNVK--QDRVQIDA 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 365 DDVMLHSEVNLPIDFLVNQ-TLTLGTEWNQQrMKDLSSNTQALTGTNTGGAIDGVSATDRSPYSKAEIFSLFAENNMELT 443
Cdd:TIGR01783 296 GLDGEFETGPIEHDLLLGVsYGQRTTNRFNN-TGYPSDNIYSLTATSSARTDIGDSPKDRALSSTTKALNGVALQRILLA 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 444 DSTIVTPGLRFDHHSIVGNNwspALNISQGLGDDFTLKMGIARAYKAPSLYQTNPNYILYSKGQGCYAsagGCYLQGNDD 523
Cdd:TIGR01783 375 DKWTLTLGGRYDSVDVKSNN---GVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYP---KGAGNSGDI 448
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 524 LKAETSINKEIGLEFKR-DGWLAGVTWFRNDYRNKIEAGyVAVGQNAVGTDLYQWDNVPKAVVEGLegSLNVPVSETVMW 602
Cdd:TIGR01783 449 LEPEKGKNYELGVRYDLgDSLLATAALFRITKDNQLVQD-PVNGTFSVNAGKTRNRGVELEARGYL--TPGLSLSAGYTY 525
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 603 TNNITYMLKSENkTTGDRLSIIPEYTLNSTLSWQAREDlSMQTTFTWYGKQQPKKYnykgqpAVGPETKEISPYSIVGLS 682
Cdd:TIGR01783 526 TDAEFTEDTNGD-TQGNTVPFVPKHTASLWASYAPPVG-DNGLTLGGGVQYTGKAY------VDGGNTGKVPSYTVVDLS 597
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1425613064 683 ATWDVT--KNVSLTGGVDNLFDKRLWRAGNAQTTgdlaganyiagaGAYTYNEPGRTWYMSINTHF 746
Cdd:TIGR01783 598 VRYDLTkkKNLTLALNVNNLFDRDYYTSGYRWGP------------SAYIYPGAPRTVGLSVSYDF 651
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
49-746 |
3.49e-136 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 416.08 E-value: 3.49e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 49 GVSTITADEIRKNPvARDVSEIIRTMPGVNLTGNStsgqRGNNRQIDIRGMGPENTLILIDGKPVSSRNSVRQGwrgerd 128
Cdd:cd01347 1 SVSVITAEDIEKQP-ATSLADLLRRIPGVSVTRGG----GGGGSTISIRGFGPDRTLVLVDGLPLASSNYGRGV------ 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 129 trgDTSWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGSGEWHGSWDAYFNAPehkEEGATKRTNFSLTGPLGDE 208
Cdd:cd01347 70 ---DLNTIPPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSD---NSGSSGGGGFDVSGALADD 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 209 --FSFRLYGNLDKTQADAWDInqghqsaragtyattLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDT 286
Cdd:cd01347 144 gaFGARLYGAYRDGDGTIDGD---------------GQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGT 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 287 QNTNS---------DSYTRSKYGDETNRLYRQNYSLTWNGGWDNGVTTSNW-VQYEHTRNSRIPEGLAGGTEGKFNEKA- 355
Cdd:cd01347 209 LPANGtgsslgggpSSNTNGDRDWDYRDRYRKRASLGLEHDLNDTGWTLRAnLSYSYTDNDGDPLILNGGNNAAGGDLGr 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 356 TQDFVDIDLDDVMLHSEVNLPID-FLVNQTLTLGTEWNQQRmkdlssntqaltgtntggaidgvsatdrspySKAEIFSL 434
Cdd:cd01347 289 SGYSSERDTTQLGFDAGLNAPFGtGPVAHTLTLGVEYRREE-------------------------------LDEKQTAL 337
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 435 FAENNMELTDSTIVTPGLRFDHHSI--------------VGNNWSPALNISQGLGDDFTLKMGIARAYKAPSLYQTNPNY 500
Cdd:cd01347 338 YAQDTIELTDDLTLTLGLRYDHYDQdskdtiaggttakkSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGG 417
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 501 ilyskgqgcyaSAGGCYLQGNDDLKAETSINKEIGLEFKRD-GWLAGVTWFRNDYRNKIEAGYVAVGQNAVgtdlYQWDN 579
Cdd:cd01347 418 -----------SHGGTAAVGNPNLKPEKSKQYELGLKYDPGdGLTLSAALFRIDIKNEIVSTPTNTGLGLV----TVYVN 482
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 580 VPKAVVEGLEGSLNVPVSETVMWTNNITYM----LKSENKTTGDRLSIIPEYTLNSTLSWQA-REDLSMQTTFTWYGKQQ 654
Cdd:cd01347 483 GGKARIRGVELEASYDLTDGLGLTGSYTYTdtevKRTDGATTGNRLPGIPKHTANLGLDYELpDEGLTAGGGVRYRGKQY 562
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 655 PKKYNykgqpavGPETKEISPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWRagnaqttgdlagANYIAGAGAYTYNEP 734
Cdd:cd01347 563 ADTAN-------GNNTVKVPGYTLVDLSASYQFTKNLTLRLGVNNLFDKDYYT------------SLSVRGSGLYGYYGP 623
|
730
....*....|..
gi 1425613064 735 GRTWYMSINTHF 746
Cdd:cd01347 624 GRTYYLSVSYKF 635
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
8-694 |
5.24e-121 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 375.73 E-value: 5.24e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 8 LALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTA---AEQNLQAPG-VSTITADEIRKNPvARDVSEIIRTMPGVNLTgns 83
Cdd:COG4771 2 LLASLLLLLALAAQAADALAEDATELEEVVVTAtrtEQSLSDAPAsVSVITAEEIEKLG-ATDLADALRLLPGVSVT--- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 84 TSGQRGNNRQIDIRGMGPENTLILIDGKPVSSRNsvrqgwrgeRDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAAGGV 163
Cdd:COG4771 78 RSGGRGGSSGISIRGLGGDRVLVLIDGVPVNNPA---------LGGGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGV 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 164 VNIITKKGSGEWHGSWDAYFNAPEHkeegATKRTNFSLTGPlGDEFSFRLYGNLDKTQADAwdinqghqsaragTYATTL 243
Cdd:COG4771 149 INIITKKPTDELEGSVSLGYGSNGN----GTYSGSLSLGGP-GDKLSFLLSGSYRDRDGYL-------------DYRNGG 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 244 PAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNSDSYTRSKYGDETNRlyRQNYSLTWNGGWDNGV 323
Cdd:COG4771 211 FVGNSGYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNAGDRDTTTD--RGNYSLRYNGDLGDNL 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 324 TTSnwVQYEHTRNSRIPEGLAGGtegkfnekaTQDFVDIDLDDVMLHSEVNLPIDflVNQTLTLGTEWNQQRMKDLSSNT 403
Cdd:COG4771 289 DLS--LYYSRTDRDSTNGSLGGS---------TGSFSDSDDTTYGLELDLTYPLG--GNHTLTLGAEYRYDDLDSSSFLG 355
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 404 QALTGTNTggaidgvsatdrspyskaeiFSLFAENNMELTDSTIVTPGLRFDHHSIVG----NNWSPALNISQGLGDDFT 479
Cdd:COG4771 356 GADASRDT--------------------YGLFAQDEWKLTDKLTLTAGLRYDYYSTFGasnyTAFSPRLGLRYDLSDNLT 415
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 480 LKMGIARAYKAPSLYQTNPNYILYskgqgcyasaGGCYLQGNDDLKAETSINKEIGLEFK--RDGWLAGVTWFRNDYRNK 557
Cdd:COG4771 416 LRASYGRGFRAPSLAELYGSGTGT----------PGRYVLGNPDLKPETSDNYELGLEYRlgNGGLSLSLTGFYTDIKDL 485
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 558 IEAGYVAVGQNAVgtdlYQWDNVPKAVVEGLEGSLNVPVSETVMWTNNITYM-LKSENKTTGDRLSIIPEYTLNSTLSWQ 636
Cdd:COG4771 486 IVLVPVGPGPGDV----LQYENVGKARTYGLELELKYRLGKGLTLTASYTYLdSKIDDGDTGEPLPNVPPHKANLGLDYR 561
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*...
gi 1425613064 637 AREDLSMQTTFTWYGKQQPKKYNYkgqpavgPETKEISPYSIVGLSATWDVTKNVSLT 694
Cdd:COG4771 562 LPKWWLLLLLTRYYGGRYVTPPSG-------RLEGYTPGYTLLDLRASYKLTKNLTLS 612
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
7-746 |
2.27e-110 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 349.57 E-value: 2.27e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 7 SLALLVNLGIYGVA-QAQEPTDTPVSHDDTIVVTAA--EQNLQ-APG-VSTITADEIRKNPVaRDVSEIIRTMPGVNLTG 81
Cdd:PRK10064 3 RLNPFVRVGLCASAiSCAWPVLAVDDDGETMVVTASavEQNLKdAPAsISVITQEDLQRKPV-QNLKDVLKEVPGVQLTN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 82 NSTsgqrgNNRQIDIRGMGPENTLILIDGKPVSSRNSVRqgwrgeRDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAAG 161
Cdd:PRK10064 82 EGD-----NRKGVSIRGLDSSYTLILIDGKRVNSRNAVF------RHNDFDLNWIPVDAIERIEVVRGPMSSLYGSDALG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 162 GVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPLGDE-FSFRLYGNLDKTQADAwdinqghqSARAGTYA 240
Cdd:PRK10064 151 GVVNIITKKIGQKWHGTVTVDTTIQEHRDRGDTYNGQFFTSGPLIDGvLGMKAYGSLAKREKDD--------PQNSTTTD 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 241 TTLPAGREGVINKDINGVVRWdfAPLQSLELEAGysrqgnlYAGDTQNTNSDSYTRskygdetNRLYRQNYSLTWNGGWD 320
Cdd:PRK10064 223 TGETPRIEGFTSRDGNVEFAW--TPNQNHDFTAG-------YGFDRQDRDSDSLDK-------NRLERQNYSLSHNGRWD 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 321 NGVTTSNWVqyehtrNSRIPEGLAGGTEGKFNEKATQDfvdidlddvmlhSEVNLPIDfLVNQTLTLGTEWNQQRMKDLS 400
Cdd:PRK10064 287 YGNSELKYY------GEKVENKNPGNSSPITSESNSID------------GKYTLPLT-AINQFLTFGGEWRHDKLSDAV 347
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 401 SntqaLTGTNTggaidgvSATDRSPYskaeifSLFAENNMELTDSTIVTPGLRFDHHSIVGNNWSPALNISQGLGDDFTL 480
Cdd:PRK10064 348 N----LTGGTS-------SKTSASQY------ALFVEDEWRIFEPLALTTGVRMDDHETYGDHWSPRAYLVYNATDTVTV 410
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 481 KMGIARAYKAPSLYQTNPNYILYSKGqgcyasaGGCYLQGNDDLKAETSINKEIGLEFK-RDGWLAGV----TWFRNDYR 555
Cdd:PRK10064 411 KGGWATAFKAPSLLQLSPDWTSNSCR-------GACKIVGSPDLKPETSESWELGLYYMgEEGWLEGVessvTVFRNDVD 483
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 556 NKIE----------------AGYVAVGqNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETVMWTNNITYMLKSENKTTGD 619
Cdd:PRK10064 484 DRISisrtsdvnaapgyqnfVGFETNG-RGRRVPVFRYYNVNKARIQGVETELKIPFNDEWKLSLNYTYNDGRDVSNGEN 562
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 620 R-LSIIPEYTLNSTLSWQAREdlSMQTTFTWYGkqqpkkyNYKGQPAVGPET-KEISPYSIVGLSATWDVTKNVSLTGGV 697
Cdd:PRK10064 563 KpLSDLPFHTANGTLDWKPLA--LEDWSFYVSG-------NYTGQKRADSATaKTPGGYTIWNTGAAWQVTKDVKLRAGV 633
|
730 740 750 760
....*....|....*....|....*....|....*....|....*....
gi 1425613064 698 DNLFDKRLWRagnaqttgdlaganyiagaGAYTYNEPGRTWYMSINTHF 746
Cdd:PRK10064 634 LNLGDKDLSR-------------------DDYSYNEDGRRYFMAVDYRF 663
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
7-746 |
4.40e-102 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 327.89 E-value: 4.40e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 7 SLALLVNLGIYGVAQAQEpTDTPVSHDDTIVVTAA--EQNLQ-APG-VSTITADEIrKNPVARDVSEIIRTMPGVNLTGN 82
Cdd:PRK13483 8 VISALCLLPAVFVTHALA-QAAPDKTMETVVVTASgyEQQIRdAPAsISVITREDL-ENRFYRDLTDALLDVPGVVVTGG 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 83 stsgqrGNNRQIDIRGMGPENTLILIDGKPVSSRNSvrqgwRGERDTRG-DTSWVPP-EMIERIEVLRGPAAARYGNGAA 160
Cdd:PRK13483 86 ------GDRTDISLRGMGSQYTLILVDGKRQSSRET-----RPNSDGPGvEQAWTPPlAAIERIEVIRGPMSSLYGSDAI 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 161 GGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPLGDE-FSFRLYGNLDKTQADawDINQGHQSARagty 239
Cdd:PRK13483 155 GGVINIITRKVPNEWQGEVRLDTTLQENSDSGNVYQANFFVNGPLIKDlLGLQLYGQYTQREED--DIEGGYRDKD---- 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 240 ATTLPAGREGVINKDingvvrwdfaplQSLELEAGYSRQ---GNLYAGDTQNTNSDSYTRSKYGDETNRLYRQN-YSLTW 315
Cdd:PRK13483 229 ARSLTAKLALTPNED------------HDIMLEVGTSNQerdSTVGKTVAPLAPGESCGRRGCPESSTTEYERStVSLSH 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 316 NGGWDNGVTTSnWVQYEHTRN-SRipeglaggtegkfnekatqdfvDIDLDDVMLHSEVNLPIdfLVNQTLTLGTEWNQQ 394
Cdd:PRK13483 297 TGRWDFGTSDT-YIQHEEFDNkSR----------------------EMKIKNTDFQSSLVAPL--GQEHTLTFGAAYNHQ 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 395 RMKDLSSNTqaltgtntggaIDGVSATDRSPYskaeifSLFAENNMELTDSTIVTPGLRFDHHSIVGNNWSPALNISQGL 474
Cdd:PRK13483 352 DLTDETSNQ-----------ISDLTDISRTQW------AVFSEDEWRIADDFALTGGLRLDHDENFGGHVSPRVYGVWNL 414
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 475 GDDFTLKMGIARAYKAPSLYQTNPNYILYSKGQGCYasaggcylqGNDDLKAETSINKEIGLEF-KRDGWLAGVTWFRND 553
Cdd:PRK13483 415 APSWTVKGGVSTGFRAPSLRQTTPDWGQVSRGGNIY---------GNPDLKPETSLNKELGLYYdLGSGLTASLTVFYNE 485
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 554 YRNKIE-----AGYVAVGQNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETVMWTNNITYMlKSENKT---TGDRLSIIP 625
Cdd:PRK13483 486 FKDKITrvacpATQCTDGPNQFGADPTTYVNIDEAVTQGVEASLSYPITSTLSLSGNYTYT-DSEQKSgayKGSPLNQLP 564
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 626 EYTLNSTLSWQAREDLSmqttfTWygkqqpKKYNYKG---QPAVGPETKE-ISP-YSIVGLSATWDVTKNVSLTGGVDNL 700
Cdd:PRK13483 565 KHLFQASLNWEPTDRLN-----SW------ARVNYRGeesQPTTGPSSSSfIAPsYTFLDLGANYQLTDNLKLSAGIYNL 633
|
730 740 750 760
....*....|....*....|....*....|....*....|....*.
gi 1425613064 701 FDKRLwragnaqttgdlagaNYIagagAYTYNEPGRTWYMSINTHF 746
Cdd:PRK13483 634 FDKEI---------------NYE----EYGYVEDGRRYWLGMTYSF 660
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
1-705 |
2.67e-90 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 296.68 E-value: 2.67e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 1 MNKKIHSLALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTAA--EQNLQ-APG-VSTITADEIRKNPVaRDVSEIIRTMPG 76
Cdd:PRK13513 3 QRFRKTHKAALVIAAAISSQAYAAEKTNTATPTDTMVVTASgfQQRIQdAPAsISVVTREQLENKAY-RDVTDALKDVPG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 77 VNLTGNstsgqrGNNRQIDIRGMGPENTLILIDGKPVSSRNSvrqgwRGERDTRG-DTSWVPP-EMIERIEVLRGPAAAR 154
Cdd:PRK13513 82 VVVTGG------GSTSDISIRGMAAKYTLILVDGKRVDTRST-----RPNSDGSGiEQGWLPPlAAIERIEVVRGPMSSL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 155 YGNGAAGGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPLGDE-FSFRLYGNLDKTQADAWDINQGHQS 233
Cdd:PRK13513 151 YGSDAMGGVINIITRKVQKEWHGSLRADATLQEDSKSGDIFQTNAYASGPLIDGlLGLKVSGLLSHRSEDKIIDGYNEQR 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 234 ARAGTYATTLPAGREgvinkdingvvrwdfaplQSLELEAGYSRQG-NLYAGDTQNTNSdsytrskyGDETNRLYRQNYS 312
Cdd:PRK13513 231 MRNGTATFSLTPDDN------------------NEFDFEIGRYVQDrNSTPGRTLALNG--------TNSDTQYDRNNYA 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 313 LTWNGGWDNGVTTSnWVQYEHTRN-SRipeglaggtegkfnekatqdfvDIDLDDVMLHSEVNLPIDflvNQTLTLGTEW 391
Cdd:PRK13513 285 ITHNGYYDFGNSTS-YIQRDETRNpSR----------------------QMKSVDTIFNTQTSFLLD---DHTLSLGGQY 338
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 392 NQQRMKDlssntqaltGTNTGGAIDGVSATDRspYSKAeifsLFAENNMELTDSTIVTPGLRFDHHSIVGNNWSPALNIS 471
Cdd:PRK13513 339 RYEELYD---------KGNQLPSASDLNKLTR--WSWA----LFAEDEWQMTNDFALTGGIRMDQDQNYGTHWTPRLYGV 403
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 472 QGLGDDFTLKMGIARAYKAPSLYQTNPNYilyskGQgcyASAGGCY---LQGNDDLKAETSINKEIGLEF-KRDGWLAGV 547
Cdd:PRK13513 404 WHLADQWTLKGGVSTGYRSPDLRQATDNW-----GQ---LTGGGGLpalILGNSDLKPEKSISQEIGILWdNQENLNASV 475
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 548 TWFRNDYRNKIEAGYVAVGQNA-----VGTDLYQW----DNVPKAVVEGLEGSLNVPVSETVMWTNNITYMlKSENKT-- 616
Cdd:PRK13513 476 TLFNTDFKDKITEVRNCDTTNTdgqcvFNGINYDFisdrINVDKANMRGVEATFNWDINQAWSLATNYTFT-QSEQKSga 554
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 617 -TGDRLSIIPEYTLNSTLSWQAREDLSMQTTFTWYGKQQpkkyNYKGQPAVGpetKEISPYSIVGLSATWDVTKNVSLTG 695
Cdd:PRK13513 555 fAGQPLNQMPKHMANATLNWQTTEDFATWIRINYRGKTS----EYLNRTSMG---SGTPSYTFVDLGASYQLTKELRLMG 627
|
730
....*....|
gi 1425613064 696 GVDNLFDKRL 705
Cdd:PRK13513 628 GVYNLLDKRV 637
|
|
| OM_channels |
cd01345 |
Porin superfamily. These outer membrane channels share a beta-barrel structure that differ in ... |
464-743 |
1.08e-89 |
|
Porin superfamily. These outer membrane channels share a beta-barrel structure that differ in strand and shear number. Classical (gram-negative ) porins are non-specific channels for small hydrophillic molecules and form 16 beta-stranded barrels (16,20), which associate as trimers. Maltoporin-like channels have specificities for various sugars and form 18 beta-stranded barrels (18,22), which associate as trimers. Ligand-gated protein channels cooperate with a TonB associated inner membrane complex to actively transport ligands via the proton motive force and they form monomeric, (22,24) barrels. The 150-200 N-terminal residues form a plug that blocks the channel from the periplasmic end.
Pssm-ID: 238655 [Multi-domain] Cd Length: 253 Bit Score: 281.63 E-value: 1.08e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 464 WSPALNISQGLG----DDFTLKMGIARAYKAPSLYQTNPNyilyskgqgcyasaggcylqgNDDLKAETSINKEIGLEFK 539
Cdd:cd01345 7 FNPVLNIRQGLGqtpdDDLTLK*GYARANKAPSLYQTNPG---------------------NDDAKAETSDGKEIGLEFK 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 540 R-DGWLAGVTWFRNDYRNKIEAGYVAVGQNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETVMWTNNITYMLKSENKTTg 618
Cdd:cd01345 66 RdGGWLAGVTYARNDYTNKIEAGYVAVGQNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETV*WTNNYTY*LKSENKTT- 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 619 dRLSIIPEYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYnykgqpavgpetKEISPYSIVGLSATWDVTKNVSLTGGVD 698
Cdd:cd01345 145 -RLSIIPEYTLNVTLSWQAREDLS*QVTYTWYKKQQPKKY------------KEIDPYSIVGLSATWDVTKNVSLTGGYD 211
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1425613064 699 NLFDKRLWRAGNAQTTGDlagANYIAGAGAYTYNEPGRTWYMSIN 743
Cdd:cd01345 212 NLFDKRLWRAGNAQTTGD---ANYIAGAGAYTYNEPGDTWY*GVN 253
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
34-704 |
1.49e-77 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 263.02 E-value: 1.49e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 34 DTIVVTA---AEQNLQAPG-VSTITADEIRKNPVArDVSEIIRTMPGVNLTGNStsgqrgNNRQIDIRGMGPENTLILID 109
Cdd:PRK13484 31 DTLVVTAsgfTQQLRNAPAsVSVITSEQLQKKPVS-DLVDAVKDVEGISITGGN------EKPDISIRGLSGDYTLILVD 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 110 GKPVSSRNSVRQGWRGErdtrgDTSWVPP-EMIERIEVLRGPAAARYGNGAAGGVVNIITKKGSGE-WHGSWDAYFNAPE 187
Cdd:PRK13484 104 GRRQSGRESRPNGSGGF-----EAGFIPPvEAIERIEVIRGPMSSLYGSDAIGGVINIITKPVNNQtWDGVLGLGGIIQE 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 188 HKEEGATKRTNFSLTGPL-GDEFSFRLYGNLDKTQADAwdINQGHqsaragtyattlpaGREGviNKDINGVVRWDFAPL 266
Cdd:PRK13484 179 HGKFGNSTTNDFYLSGPLiKDKLGLQLYGGMNYRKEDS--ISQGT--------------PAKD--NKNITATLQFTPTES 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 267 QSLELEAGY-SRQGNLYAGDTQN--TNSDSYTRSKYGDETNRlYRQNYSLTWNGGWDngVTTSNWVQY-EHTRNSRIPEG 342
Cdd:PRK13484 241 QKFVFEYGKnNQVHTLTPGESLDawTMRGNLKQPNSKRETHN-SRSHWVAAWNAQGE--ILHPEIAVYqEKVIREVKSGK 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 343 LAGGTEGKFNEKATQDfvdiDLDDVMLHSEVNLpidFLVNQTLTLGTEWNQQRMKDLSSNTQALTGTNTggaidgVSATD 422
Cdd:PRK13484 318 KDKYNHWDLNYESRKP----EITNTIIDAKVTA---FLPENVLTIGGQFQHAELRDDSATGKKTTETQS------VSIKQ 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 423 RSpyskaeifsLFAENNMELTDSTIVTPGLRFDHHSIVGNNWSPALNISQGLGDDFTLKMGIARAYKAPSLYQTNPNYil 502
Cdd:PRK13484 385 KA---------VFIENEYAATDSLALTGGLRLDNHEIYGSYWNPRLYAVYNLTDNLTLKGGIAKAFRAPSIREVSPGF-- 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 503 yskgqGCYASAGGCYLQGNDDLKAETSINKEIGLEFKR-DGWLAGVTWFRNDYRNKIEAGYVAVGQNAVGTDLYQWDNVP 581
Cdd:PRK13484 454 -----GTLTQGGASIMYGNRDLKPETSVTEEIGIIYSNdSGFSASATLFNTDFKNKLTSYDIGTKDPVTGLNTFIYDNVG 528
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 582 KAVVEGLEGSLNVPVSETVMWTNNITYM---LKSENKT------TGDRLSIIPEYTLNSTLSWQAREDLSMQTTFTWYGK 652
Cdd:PRK13484 529 EANIRGVELATQIPVYDKWHVSANYTFTdsrRKSDDESlngkslKGEPLERTPRHAANAKLEWDYTQDITFYSSLNYTGK 608
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 1425613064 653 Q--QPKKYNYKgqpavGPETKeiSPYSIVGLSATWDVTKNVSLTGGVDNLFDKR 704
Cdd:PRK13484 609 QiwAAQRNGAK-----VPRVR--NGFTSMDIGLNYQILPDTLINFAVLNVTDRK 655
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
34-716 |
6.27e-77 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 260.53 E-value: 6.27e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 34 DTIVVTA---AEQNLQAPG-VSTITADEIRKNPvARDVSEIIRTMPGVNLTGNStsgqrGNNRQIDIRGMG--PENTLIL 107
Cdd:COG1629 2 EEVVVTAtrtDESLQDVPGsVSVISREQLEDQP-ATDLGDLLRRVPGVSVTSAG-----GGAGQISIRGFGggGNRVLVL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 108 IDGKPVSSRNSVRQGWrgerdtrgdtSWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGSGEWHGSWDAYFNApe 187
Cdd:COG1629 76 VDGVPLNDPSGGDGGL----------SYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYGS-- 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 188 hkeeGATKRTNFSLTGPLGDeFSFRLYGNldKTQADAWDINQGHQSaragtyattlpagregvinKDINGVVRWDFAPLQ 267
Cdd:COG1629 144 ----YGTYRASLSLSGGNGK-LAYRLSAS--YRDSDGYRDNSDSDR-------------------YNLRAKLGYQLGDDT 197
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 268 SLELEAGYSRQGNLYAGDTQNTN-------SDSYTRSKYGDETNRLYRQNYSLTWNGGWDNGVTTSNwVQYEHTRNSrip 340
Cdd:COG1629 198 RLTLSASYSDSDQDSPGYLTLAAlrprgamDDGTNPYSNDTDDNTRDRYSLSLEYEHLGDGLKLSAS-AYYRYDDTD--- 273
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 341 egLAGGTEGKFNEKATQDFVDIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWNQQRMKDLSSNtqaltgTNTGGAIDGVSA 420
Cdd:COG1629 274 --LDSDFTPTPADGGTLEQTDFDNRTYGLELRLTYDLGFGGKHTLLVGLDYQRQDLDGSGYP------LDLGSGSLPTLT 345
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 421 TDRSPYSKAEIFSLFAENNMELTDSTIVTPGLRFDHHSIVG----------------NNWSPALNISQGLGDDFTLKMGI 484
Cdd:COG1629 346 SGADDDGTTTSLALYAQDTYKLTDKLTLTAGLRYDYVSYDVddtvtgtdsasgsrsySAFSPSLGLTYQLSPNLSLYASY 425
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 485 ARAYKAPSLYQTNPNYILYskgqgcyasaggcYLQGNDDLKAETSINKEIGL--EFKRDGWLAGVTWFRNDYRNKIeagY 562
Cdd:COG1629 426 SRGFRAPTFGELYANGTDP-------------YSVGNPDLKPETSTNYELGLryRLLDGRLSLSLALFYSDVDNEI---L 489
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 563 VAVGQNAVGTDLYqWDNVPKAVVEGLEGSLNVPVSETVMWTNNITYMlKSENK--------TTGDRLSIIPEYTLNSTLS 634
Cdd:COG1629 490 SVPLPNDSGFSTY-YTNAGKARSYGVELELSYQLTPGLSLNASYSYT-DAKFDddtdgsadLDGNRLPGVPPLTANLGLT 567
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 635 WQAREDLSMQTTFTWYGKQQPKKYNYKGQPavgpetkeiSPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWRAGNAQTT 714
Cdd:COG1629 568 YEFPGGWSLGLGVRYVGDRYLDDANTQGAP---------GGYTLVDLGAGYRFGDNLTLSLGVDNLFDKKYATSLSVRAS 638
|
..
gi 1425613064 715 GD 716
Cdd:COG1629 639 NV 640
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
33-746 |
7.69e-67 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 234.15 E-value: 7.69e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 33 DDTIVVTAA--EQNLQ--APGVSTITADEIRKNPVaRDVSEIIRTMPGVNLtgNSTSGQRGNnRQIDIRGMGPENTLILI 108
Cdd:PRK13486 25 EDVMIVSASgyEKKLTnaAASVSVISQEELQSSQY-HDLAEALRSVEGVDV--ESGTGKTGG-LEISIRGMPASYTLILI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 109 DGkpvssrnsVRQGWRGERDTRG----DTSWVPP-EMIERIEVLRGPAAARYGNGAAGGVVNIITKKGSGEWHGSWDAYF 183
Cdd:PRK13486 101 DG--------VRQGGSSDVTPNGfsamNTGFMPPlAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKWLSSVNAGL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 184 NAPEHKEEGATKRTNFSLTGPL-GDEFSFRLYGNLDKTQADAwdinqghQSARAGTYATTLPAGREGViNKDINGVVRWD 262
Cdd:PRK13486 173 NLQESNKWGNSSQFNFWSSGPLvDDSVSLQVRGSTQQRQGSS-------VTSLSDTAATRIPYPTESQ-NYNLGARLDWK 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 263 FAPLQSLELEAGYSRQgnlyagdtQNTNSDSYTRSKYG--DETNRLYRQNYSLTWNGGWDNGVTTS--NWVQYEHTRNSR 338
Cdd:PRK13486 245 ASEQDVLWFDMDTTRQ--------RYDNRDGQLGSLTGgyDRTLRYERNKISAGYDHTFTFGTWKSylNWNETENKGREL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 339 IPEGLAGGTEGkfneKATQDfVDIDLDDVMLHSEVNLPIDflVNQTLTLGTEWNQQRMKdlssntqaltgtntggaiDGV 418
Cdd:PRK13486 317 VRSVLKRDKWG----LAGQP-RELKESNLILNSLLLTPLG--ESHLVTVGGEFQSSSMK------------------DGV 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 419 SATDRSPYSKAEIFSLFAENNMELTDSTIVTPGLRFDHHSIVGNNWSPALNISQGLGDDFTLKMGIARAYKAPSLYQTNp 498
Cdd:PRK13486 372 VLASTGETFRQKSWSVFAEDEWHLTDALALTAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQLH- 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 499 nyilysKGQGCYASAGGCYLQGNDDLKAETSINKEIGLEFKR-DGWLAGVTWFRNDYRNKIEAgyvavgqNAVGTDLYQW 577
Cdd:PRK13486 451 ------KGISGVSGQGKTNLLGNPDLKPEESVSYEAGVYYDNpAGLNANVTGFMTDFSNKIVS-------YSINDNTNSY 517
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 578 DNVPKAVVEGLEGSLNVPV-SETVMWTNNITYMlKSENK---TTGDRLSIIPEYTLNSTLSWQAREDLSMQTTFTWYGKQ 653
Cdd:PRK13486 518 VNSGKARLHGVEFAGTLPLwSEDVTLSLNYTWT-RSEQRdgdNKGAPLSYTPEHMVNAKLNWQITEEVASWLGARYRGKT 596
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 654 QPKKYNYKGQPAVGPETKE-----ISPYSIVGLSATWDVTKNVSLTGGVDNLFDK-----RLWRAGNAQTtgdLAGANYI 723
Cdd:PRK13486 597 PRFTQNYSSLSAVQKKVYDekgeyLKAWTVVDAGLSWKMTDALTLNAAVNNLLNKdysdvSLYSAGKSTL---YAGDYFQ 673
|
730 740
....*....|....*....|...
gi 1425613064 724 AGAGAYTYNEPGRTWYMSINTHF 746
Cdd:PRK13486 674 TGSSTTGYVIPERNYWMSLNYQF 696
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
1-746 |
1.84e-61 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 219.03 E-value: 1.84e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 1 MNKKIHSLALLvnlgiyGVAQAQEPTDTpvshDDTIVVTA---AEQNLQA-PG-VSTITADEIRKNPvARDVSEIIRTMP 75
Cdd:COG4772 1 MRRALAAALLL------AAAAAAEAATT----LETVVVTGsraAEARLKDvPGsVSVVDREELENQA-ATSLREVLRRVP 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 76 GVNLTGNSTSGQRGNnrqIDIRGMGPE---NTLILIDGKPVSSrnsvrqgwrgerDTRGDTSWV---PPEMIERIEVLRG 149
Cdd:COG4772 70 GVNVQEEDGFGLRPN---IGIRGLGPRrsrGITLLEDGIPIAP------------APYGDPAAYyfpDLERMERIEVLRG 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 150 PAAARYGNGAAGGVVNIITKKGSGEWHGSWDAYFNapehkeEGATKRTNFSLTGPLGDefsFRLYGNLDKTQADAWdinQ 229
Cdd:COG4772 135 AAALRYGPQTVGGAINFVTRTIPTAFGGELRVTGG------SFGYRRTHASVGGTVGN---FGYLVEYSRKRGDGF---R 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 230 GHQSARAgtyattlpagregvinKDINGVVRWDFAPLQSLELEAGYSRQ-GNLYAGDTQ---NTNSDSYTRSKYGDETNr 305
Cdd:COG4772 203 DNSGFDI----------------NDFNAKLGYRLSDRQELTLKFQYYDEdANTPGGLTDaqfDADPRQSYRPADQFDTR- 265
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 306 lyRQNYSLTWNGGWDNGvTTSNWVQY--EHTRNSRIPEGLAG-GTEGKFNEKATQDFVD--IDLDdvmLHSEVNLpidFL 380
Cdd:COG4772 266 --RTQLSLRYEHQLSDN-TTLTTTAYynDFSRNWYIRQNTADpNTPGLGLRGNPRGYRSygIEPR---LTHRFEL---GG 336
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 381 VNQTLTLGTEWNQQRMKDLSsntqaltGTNTGGAIDGVSATDRSPYSKAEIFSLFAENNMELTDSTIVTPGLRFDH---- 456
Cdd:COG4772 337 VPHTLEVGLRYHREEEDRKQ-------YVNTYGQGRSGAGLRRDRRFSADALAAYAQNRFELTGRLTLTPGLRYEHirrd 409
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 457 ---HSIVGNN-----------WSPALNISQGLGDDFTLKMGIARAYKAPSLYQtnpnyILYSKGqgcyasaggcylqGND 522
Cdd:COG4772 410 rtdRYSTRTGgddsgsnsyseFLPGLGLLYQLTDNLQLYANVSRGFEPPTFGD-----LAYGNG-------------GNP 471
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 523 DLKAETSINKEIGLEFKRDGWLAG-VTWFRNDYRNKIEAGYVAVGQNAVgtdlyqWDNVPKAVVEGLEGSLNVPVSET-- 599
Cdd:COG4772 472 DLKPEKSWNYELGTRGRIGNGLSAeVALFYIDYDNELGSCSAAGGDRST------FTNAGETRHQGLELALDYDLLKGgg 545
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 600 --VMWTNNITYmLKSENKTT------GDRLSIIPEYTLNSTLSWQaREDLSMQTTFTWYGKQqpkkYNYKGQPAVGPETK 671
Cdd:COG4772 546 lgLPLFAAYTY-TDAEFTSDfgpvfaGNRLPYVPRHQLTAGLGYE-HGGWTANLNGRYVSEQ----FTDAANTVADGSFG 619
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1425613064 672 EISPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLwragnAQTTGDLAGANYIAGagaytynePGRTWYMSINTHF 746
Cdd:COG4772 620 KIPSYTVLDLSASYDFGKNLSLFAGVNNLFDKRY-----IASRAPNYAAGIRPG--------PPRTVYAGLRLKF 681
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
34-746 |
6.66e-58 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 209.58 E-value: 6.66e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 34 DTIVVTAAEQNL--------QAPGVSTITADEIRKNPVaRDVSEIIRTMPGVNLTGnstsGQRGNNRQIDIRGMGPENTL 105
Cdd:TIGR01786 1 DTITVTATRTADpqrrdlsvTPASVSVISREQLKSQQV-RNLRDLLRYEPGVSVVE----GGRGGSQGINIRGLDKNRVA 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 106 ILIDGkpvssrnsVRQGWR--GERDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGSGEWHgswdayf 183
Cdd:TIGR01786 76 VLVDG--------IRQNTSygGQGSTFYAINSIDPELIKSIEIVKGASSSLYGSGALGGVVAFRTKDAADLLK------- 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 184 napEHKEEGATKRTNFSLTGPLGdEFSFRLYGNLDKTQAD-AWDINQGHqSARAGTYATTLPAGREGVINKDINGV---- 258
Cdd:TIGR01786 141 ---PGKDLGGLSKLGYSSANNRF-TQSVAAAGRNDDVDALvQATYRRGH-ELKNGNKANIGNESKRSKPNPSDYKSqsfl 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 259 --VRWDFAPLQSLEL------EAGYSRQGNL-YAGDTQNTNSDSYTRSKYGDETNRLYRQNYSLTWNG--GWDNGVTTSN 327
Cdd:TIGR01786 216 akLGWQLNDAHRLGLsleytqTDYDEPEMTNtSYLTKPLGAPLLSSTVVLGDSKTRDRRTGLDYELNPdnSWLDTVKLAL 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 328 WVQYEHTRN--SRIPEGLAGGTEGKFNEKATQDFVDIDLDdvmlhseVNLPIDFLV-NQTLTLGTEWNQQRMKDLSSNTQ 404
Cdd:TIGR01786 296 DKQYIQLYNylNATSASDYPGVDKNGRYKDKYDYYTLGFD-------TNNKIEFSVhSLSLTYGLDRFKDKVSTGDSRRN 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 405 ALTGTNTGGAIDGvsatDRSPYsKAEIFSLFAENNMELTDSTIVTPGLRFDHHSIVG---------------NNWSPALN 469
Cdd:TIGR01786 369 LPTAAYNLYGYEG----ENRPV-KGSNFGLFLQDNIKLGDWLSLSAGLRYDHYKTDPkadeskdygaisktySRWSPSLG 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 470 ISQGLGDDFTLKMGIARAYKAPSLYQtnpnyiLYskGQGCYASAGGCYLQGNDDLKAETSINKEIGLEFKRDgWLAG-VT 548
Cdd:TIGR01786 444 LTYKPTPWLTLYYSYSQGFRAPSFDE------LY--GTGAHPGGGPYTFLPNPNLKPETSKNWEIGINLHFD-QLDFkVS 514
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 549 WFRNDYRNKIEAGY---VAVGQNAVGT-DLYQWDNVPKAVVEGLE--GSLNV--PVSETVMWTNNITYM-LKSENKTTGD 619
Cdd:TIGR01786 515 YFRNDYKDFIDLGIgvtAKGNMAQVGSnTITNYVNIDNARIRGIElsGRYDLgsFFSGPDGWTTTLKYGyTKGKDSDTNP 594
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 620 RLSIIPEYTLNSTLSWQARED-LSMQTTFTWYGKQQPKK---YNYKGQPAVGPETKEISPYSIVGLSATWDVTKNVSLTG 695
Cdd:TIGR01786 595 WLNAITPLKVVLGLGYDHPDEkWGVGLTLTFSGAKDAVDayaTYYENGEAAKAGPLRTPSYTVVDLYGYYKPNKNLTLRF 674
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|.
gi 1425613064 696 GVDNLFDKRLWRAGNAqttgdlaganYIAGAGAYTYNEPGRTWYMSINTHF 746
Cdd:TIGR01786 675 GVYNLLDRKYTTWESA----------RQAGPLATGYTAPGRNYKASVEYKF 715
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
34-726 |
5.42e-56 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 203.39 E-value: 5.42e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 34 DTIVVTAA--EQNLQ--APGVSTITADEIRKNPvARDVSEIIRTMPGVNLTGnstsGQRGNNRQIDIRGMGPENTLILID 109
Cdd:TIGR01785 2 DTVTVTATrtRQVLSeaPASVSVISGEQIESKQ-ANNLADALNTVPGVDVTG----GGRPPGQSINIRGLQDNRVLVVVD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 110 GkpvssrnsVRQGWRGERDTRGDTSWvPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGSGEWHGSWDAYFNApehk 189
Cdd:TIGR01785 77 G--------ARQNYQRGGAHNGSLFV-DPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLLRPGQLFGGLA---- 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 190 eegATKRTNFSLTGPLGDEFSFRLYGNLDK-TQADAWDINQGHQSARAgtyattlPAGREGVINKDINGVVRWDFAPLQS 268
Cdd:TIGR01785 144 ---KLSYGSNNNSFGGSVAVAGRLDDNLDAlVAATYRDGGNYRNGNKE-------EATNSAYVQKNLLAKLGWQLDDAQR 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 269 LELEAGYSR-QGNLYAGDTQNTNSDSYTRSKYGDETNRLYRQNYSLTWNGGWDNGVTTSNWVQYEHTRNSRIPEGLAGGT 347
Cdd:TIGR01785 214 LEFSYFTTEgSLDEAQNSGPGTEYVLGSSSTLLASSTRDRSATLTYNWTPEDNPWLDATASLYYNRTENDNDRSARGVGR 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 348 EGKFNEKAtqdfvdidlddvmLHSEVNLPIDFLV--NQTLTLGTEWNQQRMKDLSSnTQALTGTNTGGAIDGVSATdrsp 425
Cdd:TIGR01785 294 EEGYQYTT-------------YGATLQNTSRFDVasWSTLTYGVDWMKDKRRTESF-DPNSVTTIVPNPPSAKEYF---- 355
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 426 yskaeiFSLFAENNMELTDSTI-VTPGLRFDHHSIVGNN-------------WSPALNISQGLGDDFTLKMGIARAYKAP 491
Cdd:TIGR01785 356 ------FGLFLQDNIPLLDDRLtLSAGLRYDHYKLSPKTtadteavdrsysrWSPSLGLSYKPVDWLTLYASYSQGFRAP 429
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 492 SLYQTnpnyilYSKGQGCYASAGGCYLqGNDDLKAETSINKEIGLEFKRDGWLAG-------VTWFRNDYRNKIEAGYVA 564
Cdd:TIGR01785 430 SIDEL------YGTGDHPGTPGGYTFA-PNPNLKPETSKTWELGANLSFDNLLLDndqlqfkVAYFYNDVKDFIDLTIGV 502
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 565 VGQ-NAVGTDLYQWDNVPKAVVEGLEGSLNVpvsETVMWTNNITYM-LKSENKTTGDRLSIIPEYTLNSTLSWQ-AREDL 641
Cdd:TIGR01785 503 TDNvTAGMNNITQYVNIDGARIRGIEASASY---DAGLWATGLSYGyTIGKDQNTNQWLSNIPPLKLVVTVGYRfPDRRL 579
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 642 SMQTTFTWYGKQQPKKYNYKGQPAVGPETkeiSPYSIVGLSATWDVT--KNVSLTGGVDNLFDKRLWRAGNAQTTGdlAG 719
Cdd:TIGR01785 580 DLGAKAAYYERQSESPTTEDVAANGLLTT---PGYTVVDLYATYQPNavKGLTVRFGVNNLTDRKYTPAQSVPGAG--PG 654
|
....*..
gi 1425613064 720 ANYIAGA 726
Cdd:TIGR01785 655 RNFKGSV 661
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
18-746 |
3.15e-52 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 193.19 E-value: 3.15e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 18 GVAQAQEPTDTPVSHDDTIVVTA---AEQNLQAPGVSTIT--ADEIRKNP--------------VARDVSEIIRTMPGVN 78
Cdd:COG4773 17 ALAQAAAAAAAEATTLPEVTVTGtaeGTGGYTAKSSSTATklDTPLRETPqsvsvvtrqliedqGATTLDDALRNVPGVT 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 79 LTGNSTSGQRgnnrQIDIRGMGPENtlILIDGKPVSSRNSVRqgwrgerdtrgdtswVPPEMIERIEVLRGPAAARYGNG 158
Cdd:COG4773 97 VSSYDGGGRD----SFSIRGFSIDN--YLRDGLPLGGFGGGQ---------------PDTANLERVEVLKGPAGLLYGAG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 159 AAGGVVNIITKKGSGEWH-------GSWDAYfnapehkeegatkRTNFSLTGPLGDEFSFRLYGNLDKTQADAWdinQGH 231
Cdd:COG4773 156 SPGGLVNLVTKRPTAEPQgevslsaGSWDTY-------------RATADVGGPLNEDGTLRYRLNAAYEDGDSF---RDG 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 232 QSARAGTyattlpagregvinkdINGVVRWDFAPLQSLELEAGY--SRQGNLYAGDTQNTNSDSYTRSK-YGDETNRLYR 308
Cdd:COG4773 220 VDNRRTL----------------IAPSLDWDLTDDTTLTLGAEYqdDDSTGDRGFLPLDGTLLDLPRSTnLGEPWDYYDT 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 309 QNYSLTWNGGW--DNGVTTSNWVQYEHTRNSR----------IPEGLAGGTEGKFNEKATQDFVDIDLddvmlhsevNLP 376
Cdd:COG4773 284 ETTTLFAELEHrfNDDWSLRANARYSDSDRDGrsayaygapdAATGTLTRYASARDGDSRSDSLDANL---------NGK 354
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 377 IDFL-VNQTLTLGTEWNQQRMKDLSSNTQALTGTN-TGGAIDGVSATDRSPYSKAEIFSLFAENNMELTDSTIVTPGLRF 454
Cdd:COG4773 355 FETGgLEHTLLVGADYSRYDSDSDSATAGTINIYNpVYGNLPEPDFDASDTDTTTRQTGLYAQDQISLTDRLSLLLGGRY 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 455 DHHSIVGNNWSPALNISQGlGDDFTLKMGIaraykapsLYQTNPN---YILYSKG--QGCYASAGGcylqgnDDLKAETS 529
Cdd:COG4773 435 DWYETDSTNRLGGSTTSYD-DSAFTPRAGL--------VYDLTPGlslYASYSESfePQSGADNNG------NPLDPETG 499
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 530 INKEIGL--EFKRDGWLAGVTWFRndyrnkIEAGYVAVgQNAVGTDLYQwdNVPKAVVEGLEGSLNVPVSETVMWTNNIT 607
Cdd:COG4773 500 KQYEAGVkgELFDGRLNATLAVFD------ITQKNVAT-TDPDNPNFYV--QVGEVRSRGVELELSGELTPGLNLIAGYT 570
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 608 YM----LKSENKTTGDRLSIIPEYTLNSTLSWQ----AREDLSMQTTFTWYGKQQPKKYNYKGQPAvgpetkeispYSIV 679
Cdd:COG4773 571 YTdakiTKDADALEGKRLTNVPRHTASLWTTYRfpsgALKGLGLGGGVRYVGERYGDAANTFTLPS----------YTLV 640
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1425613064 680 GLSATWDVTKNVSLTGGVDNLFDKRlwragnaqttgdlaganYIAGAGAYTYNEPG--RTWYMSINTHF 746
Cdd:COG4773 641 DAGARYDLGKNWTLQLNVNNLFDKK-----------------YYASSGSRGYVYYGapRNVRLSLSYKF 692
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
50-746 |
1.21e-50 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 187.78 E-value: 1.21e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 50 VSTITADEIRkNPVARDVSEIIRTMPGVnltgnSTSGQRGNNR-QIDIRGMGPENTlILIDGKPVSSRNSVrqgwrgerd 128
Cdd:COG4774 13 VTVVTRELIE-DQGATSLADALRNVPGV-----TFGAGEGGNGdSFSIRGFSASGD-IYVDGLRDPGQYRR--------- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 129 trgdtswvPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGSGEWHGSWDAYFNapehkeEGATKRTNFSLTGPLGDE 208
Cdd:COG4774 77 --------DTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPFTEVTLTYG------SDGQRRATLDVNGPLGDD 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 209 FSFRLygNLDKTQADAWdinqghqsaragtyattlpagREGVINKD--INGVVRWDFAPLQSLELEAGYSRQGNLY---- 282
Cdd:COG4774 143 LAYRL--NGMYRDSDSY---------------------RDGVDNDRwgIAPSLTWRLGDRTRLTLDYEYQDDDRTPdygv 199
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 283 ----AGDTQNTNSDSYtrskYGDETNRLYRQNYSLTWNGGWD--NGVTTSNWVQYEHT----RNSRIPEGLAGGTegkfn 352
Cdd:COG4774 200 pavaNGRPVDVDRSTF----YGQPDDYSDSETDSATLRLEHDfnDNWTLRNALRYSDYdrdyRNTYPTGGNATGT----- 270
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 353 ekATQDFVDIDLDDVMLHSEVNLPIDFL---VNQTLTLGTEWNQQRMKDLSSNTQALTGT------NTGGAIDGVSATDR 423
Cdd:COG4774 271 --VTRSAYRRDQDNDTLSNQTDLTGKFDtggVKHTLLAGVEYSREDSDNARYSGGGTAPTvnlynpVYGAPVTGPTLGGA 348
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 424 SPYSKAEIFSLFAENNMELTDSTIVTPGLRFDHHSIVGNNWSPALNISQGLGDDFTLKMGIaraykapsLYQTNPN---Y 500
Cdd:COG4774 349 DNDSRTDTTGLYLQDTISLTDRWSLLAGLRYDRFDTDYTDRTTGATTSSYDDSAFSPRAGL--------VYKPTPNlslY 420
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 501 ILYSKGQGCYASAGGcYLQGNDDLKAETSINKEIGL--EFKRDGWLAGVTWFRNDYRNkieagyvAVGQNAVGTDLYQwd 578
Cdd:COG4774 421 ASYSTSFNPGGGAPS-LSNAGQALDPEKSRQYEVGVkwDLLDGRLSLTAALFRIEKTN-------VRTTDPANPGVYV-- 490
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 579 NVPKAVVEGLEGSLNVPVSETVMWTNNITYM----LKSENKTT-GDRLSIIPEYTLNSTLSWQ-AREDLSMQTTFTWYGK 652
Cdd:COG4774 491 QTGEQRSRGVELEATGELTPGWSVLAGYTYLdaeiTKSANAANvGNRLPNVPRHSASLWTTYDlPLPGLTLGGGVRYVGS 570
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 653 QQpkkynykgqpAVGPETKEISPYSIVGLSATWDVTKNVSLTGGVDNLFDKRlwragnaqttgdlaganYIAGAGAYTYN 732
Cdd:COG4774 571 RY----------ADAANTVKLPSYTRFDAGASYRLNKNLTLRLNVNNLTDKR-----------------YYASAYGSGYV 623
|
730
....*....|....*.
gi 1425613064 733 EPG--RTWYMSINTHF 746
Cdd:COG4774 624 TPGapRTVLLSASYRF 639
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
279-743 |
8.43e-47 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 173.42 E-value: 8.43e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 279 GNLYAGDTQNTNSDSYTRSKYGDETNRLYRQNYSLTWNGGWDNGVTTSNWVQYEHTRNSRIPEGLAGGTEGKFNEkaTQD 358
Cdd:pfam00593 35 DGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLRYSSLDGDYTSNSSGLSGAGDYLS--DDR 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 359 FVDIDLDDVMLHSEVNLPIDFLV-NQTLTLGTEWNQQRMKDLSSNTQAltgtntggaidgVSATDRSPYSKAEIFSLFAE 437
Cdd:pfam00593 113 LYGLYGLDGDLELSLDLSHDLLLgVELRTAGLDYRRLDDDAYDPYDPA------------NPSSSSYSDTTTDSYGLYLQ 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 438 NNMELTDSTIVTPGLRFDHHSIVGNN--------------WSPALNISQGLGDDFTLKMGIARAYKAPSLYQTNPNYily 503
Cdd:pfam00593 181 DNIKLTDRLTLTLGLRYDHYSTDGDDgngggdnfsrsysaFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSG--- 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 504 skgqgcYASAGGCYLQGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRNKIeagYVAVGQNAVGTDLYQWDNVPKA 583
Cdd:pfam00593 258 ------SGGGGGAVAGGNPDLKPETSDNYELGLKYDDGRLSLSLALFYIDIKNLI---TSDPDGPGLGGTVYTYTNVGKA 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 584 VVEGLEGSLNVPVSETVMWTNNITYMLKSENK---TTGDRLSIIPEYTLNSTLSWQ-AREDLSMQTTFTWYGKQQPKKYN 659
Cdd:pfam00593 329 RIRGVELELSGRLWGLGLSGGGYTYTDADDDAdadDTGNPLPNVPRHTANLGLTYDfPLGGWGARLGARYVGSGERRYGD 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 660 YKGqpavgpeTKEISPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWRagnaqttgdlagANYIAGAGAYTYNEPGRTWY 739
Cdd:pfam00593 409 AAN-------TFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKR------------YYSSGGGNLGGYPGPGRTFY 469
|
....
gi 1425613064 740 MSIN 743
Cdd:pfam00593 470 LGLS 473
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
36-339 |
5.10e-37 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 140.01 E-value: 5.10e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 36 IVVTA--AEQNLQAPG--VSTITADEIRKNPvARDVSEIIRTMPGVNLtgnSTSGQRGNNRQIDIRGMGPENTLILIDGK 111
Cdd:COG4206 1 VVVTAtrLEQSKSDLTgsVTVIDAEELERSG-ATSLADALRRVPGVQV---SSSGGPGSAASISIRGLGSNQTLVLIDGV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 112 PVssrNSVRQGWRgerdtrgDTSWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGSGEWHGSWDAYFNapehkeE 191
Cdd:COG4206 77 PL---NDPSLGGV-------DLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASYG------S 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 192 GATKRTNFSLTGPLGDefsFRLYGNLDKTQADAWDINQGHQSARAGTYATTLpagregvinkdiNGVVRWDFAPLQSLEL 271
Cdd:COG4206 141 FGTRRLSASLSGGAGK---FSYSLSASYRRSDGYRYNDPDLRNNDGYENTSL------------NARLGYKLGDNGSLSL 205
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1425613064 272 EAGYS-RQGNLYAGDTQNTNSDSYTRSKYGDETNRLYRQNYSLTWNGGWDNGVTTSNWVQYEHTRNSRI 339
Cdd:COG4206 206 SGGYSdSERGYPGAVGSDRNLRLSLSLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGL 274
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
1-741 |
4.17e-36 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 144.75 E-value: 4.17e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 1 MNKKIHSLALLVNLGIYGVAQAQEPtdtpvshdDTIVVTAaeQNLQAPgVSTI-------TADEIRKNPvARDVSEIIRT 73
Cdd:PRK10641 1 MIKKASLLTALSVTAFSGWAQDTSP--------DTLVVTA--NRFQQP-VSTVlapttvvTRDDIDRWQ-SKSVNDVLRR 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 74 MPGVNLTGNSTSGQRGNnrqIDIRGMGPENTLILIDGKPVSsrnsvRQGWRGErdtrGDTSWVPPEMIERIEVLRGPAAA 153
Cdd:PRK10641 69 LPGVDIAQNGGLGQLSS---LFIRGTNSSHVLVLIDGVRLN-----QAGISGS----ADLSQIPISLVQRIEYIRGPRSA 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 154 RYGNGAAGGVVNIIT---KKGS----GEWHGSWDAYfnapehkeEGATKRTnfsltgpLGDEFSFRLYGNLDKT-----Q 221
Cdd:PRK10641 137 VYGSDAIGGVVNIITtrdKPGTtlsaGWGSNGYQNY--------DGSTQQQ-------LGDNTRVTLAGDYTYTkgfdvV 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 222 ADAwDINQGHQSARAGTYATTLPAGREGVINKDINGVVRwdfaplqsleleaGYsrqgnlyaGDTQNTNSDSYTRSKY-- 299
Cdd:PRK10641 202 AYG-NTGTQAQPDRDGFMSKTLWGGLEHQFNDQWSGFVR-------------GY--------GYDNRTDYDAYYSPGSpl 259
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 300 GDEtnrlyRQNYSLTWNGG--WDNGVTTSNWV-QYEHTRNSRIpeglaGGTEGKFNEKATQDfvDIDLDDVMLHSEVNLP 376
Cdd:PRK10641 260 IDT-----RQLYSQSWDAGlrYNGGIYSSQLIaSYSHSKDYNY-----DPHYGRYDSSATLD--DMKQYNVQWGNTVQVG 327
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 377 idflvNQTLTLGTEWNQQRmkdLSSNTQALTGT----NTGgaidgvsatdrspyskaeifsLFAENNMELTDSTIVTPGl 452
Cdd:PRK10641 328 -----HGNISAGVDWQKQT---TTPGTGYVPDGydqrNTG---------------------IYLTGQQQIGDVTLEGAA- 377
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 453 RFDHHSIVGNN--WSPALniSQGLGDDFTLKMGIARAYKAPSLYQtnpnyiLYSKGqgcyasaggcylqGNDDLKAETSI 530
Cdd:PRK10641 378 RSDDNSQFGWHgtWQTSA--GWEFIDGYRFIASYGTAFKAPNLGQ------LYGFY-------------GNPNLKPEESK 436
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 531 NKEIGLEfkrdGWLAGVTWFRNDYRNKIEagyvavgqNAVGTD--LYQWDNVPKAVVEGLEGSLNVpvsETVMWTNNITY 608
Cdd:PRK10641 437 QWEGGFE----GLTGPVNWRLSGYRNDID--------NLIDYDdhTLKYYNVGKATIKGVEWTGNF---DTGPLTHQVTL 501
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 609 -MLKSENKTTGDRLSIIPEYTLNSTLSWQArEDLSMQTTFTWYGKQQPKKYNykgqpAVGPETKEISPYSIVGLSATWDV 687
Cdd:PRK10641 502 dYVDPRNAITDEPLARRAKQQVKYQLDWQL-YDFDWGVTYQYLGTRYDKDYS-----TYPYQTVKLGGVSLWDLAVSYPV 575
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 1425613064 688 TKNVSLTGGVDNLFDKrlwragNAQTtgdlaganyiagagAYTYNEPGRTWYMS 741
Cdd:PRK10641 576 TSHLTVRGKIANLFDK------DYET--------------VYGYQTAGREYTLS 609
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
7-746 |
4.99e-36 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 144.24 E-value: 4.99e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 7 SLALLVNLGIYGVAQAQEPTDTpvshddtIVVTA------AEQNLQApgVSTITADEIRKNPvARDVSEIIRTMPGVNLT 80
Cdd:TIGR01779 9 ALASLLTLCSALHANEAQPLDT-------VVVTAnrfaqtASQTLAP--VTIITRQDIERTQ-AKSLPELLRRLPGVSIA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 81 GNstsGQRGNNRQIDIRGMGPENTLILIDGkpvssrnsVRQGwrgeRDTRG--DTSWVPPEMIERIEVLRGPAAARYGNG 158
Cdd:TIGR01779 79 QN---GGRGQNTSLFLRGTESDHVLVLIDG--------IRFG----SAAAGaaDFQQLPVELVERIEYVRGPRSSLYGSE 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 159 AAGGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGAtkrtnfSLTGPLGDEFSFRLYGNLDKTQAdawdINqghqsARAGT 238
Cdd:TIGR01779 144 AIGGVINIITRRRSGGQGTTLSAGLGSLDYQEYSI------ASGVAIGENGWYSVALGTESTKG----IN-----VRPGG 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 239 YATTLPaGREGVINKDINGVVRWDFaplqslelEAGYSRQGNLYAGDTQNtnsdSYTRSKYGdetNRLYRQN--YSLTWN 316
Cdd:TIGR01779 209 PGVYDP-DRDGFRSDSLLLGGGHRF--------DESWSLFVNALRYENRN----DYDNYSFG---TRLYKEAekGDQSFT 272
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 317 GGwdngvttsnwvqyEHTRNSRIPEGLAGGT-EGKFNEKATQDFVDIDLDDVMLHSEVNLPIDFLVNQ--TLTLGTEWNQ 393
Cdd:TIGR01779 273 GG-------------RQRQSERDVSELTLSTgKSKDWDYAYSKGRYSSTSDTREQRNIQWQNDLLVGDgwVLAGGVDWQK 339
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 394 QRMKDlssntqaltgtntGGAIDGVSATDRSPYskAEIFSLFAENNMELTdstivtpgLRFDHHSIVGNNWSPALNISQG 473
Cdd:TIGR01779 340 DSIIS-------------STADKEDDRSNTAAF--AQVLQQWGQQLLEAS--------LRRDDNQQFGSHTTGSIAWGYQ 396
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 474 LGDDFTLKMGIARAYKAPSLYQT-NPNYilyskgqgcyasaggcylqGNDDLKAETSINKEIGLEfkrdGWLAGVTWFRN 552
Cdd:TIGR01779 397 FIEELRFTASYGTAFKAPNLNQLyYPSY-------------------GNPNLQPETSKSAELGFY----GLFSGGKWSIS 453
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 553 DYRNKIE--AGYVAVGQNavgtdlyQWDNVPKAVVEGLEGSLNvpvSETVMWTNNITYMLK-SENKTTGDRLSIIPEYTL 629
Cdd:TIGR01779 454 GYRTKINdlIDYDSHPKG-------YPNNIGEARIKGVEATAE---FATGGWTHQLSVDLLdAQNVNTGNTLPRRARQMY 523
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 630 NSTLSWqAREDLSMQTTFTWYGKQQPKKYNykgqpAVGPETKEISPYSIVGLSATWDVTKNVSLTGGVDNLFDKrlwrag 709
Cdd:TIGR01779 524 KWNADR-AFEQFDWGASYQYVGKRYDDDYN-----TYPTQNVRLGGYSLLDLRVSYYVTDSWTVQGRIANLFDK------ 591
|
730 740 750
....*....|....*....|....*....|....*..
gi 1425613064 710 NAQTtgdlaganyiagagAYTYNEPGRTWYMSINTHF 746
Cdd:TIGR01779 592 DYET--------------AYGYPQAGRAYYLSIRYQF 614
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
50-163 |
8.44e-29 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 110.82 E-value: 8.44e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 50 VSTITADEIRKNPvARDVSEIIRTMPGVNltgnSTSGQRGNNRQIDIRGMGPENTLILIDGKPVSSRNsvrqgwrgerDT 129
Cdd:pfam07715 9 VSVVTAEDIEDQG-ATNLADALRGVPGVS----VSSGGGGGGSSISIRGFGSNRVLVLVDGVPLNSGG----------GG 73
|
90 100 110
....*....|....*....|....*....|....
gi 1425613064 130 RGDTSWVPPEMIERIEVLRGPAAARYGNGAAGGV 163
Cdd:pfam07715 74 SVDLNSIDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
3-746 |
4.24e-15 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 79.47 E-value: 4.24e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 3 KKIHSLALLVNL--GIYGVAQAQePTDTPVSHDDTIVVTAAEQNLQAPGVS----------------TITADEIRKNPVA 64
Cdd:PRK09840 10 RQFHSLAFFAGLciGITPVAQAL-AAEGQTNADDTLVVEASTPSLYAPDQSadpkfsqpladttqtiTVISEQVIKDQGA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 65 RDVSEIIRTMPGVNL-----TGNSTSGQrgnnrQIDIRGMGPENTlILIDGkpvssrnsVRQGWRGERDTRGdtswvppe 139
Cdd:PRK09840 89 TNLTEALRNVPGVGTffageNGNTTTGD-----AIYMRGFDTSNS-IYVDG--------IRDIGSISRDTFN-------- 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 140 mIERIEVLRGPAAARYGNGAAGGVVNIITKKGSgewhgsWDAYFNAPEHKEEGATKRTNFSLTGPLGDEFSFRLygNLDK 219
Cdd:PRK09840 147 -TEQVEVIKGPSGTDYGRSAPTGSINMISKQPR------NDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRL--NVMG 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 220 TQADAwdinqghqsaragtyattlpAGREGVINKdingvvRWDFAP-----LQS---LELEAGYSRQGNLYAGDTQNTNS 291
Cdd:PRK09840 218 EKTHD--------------------AGRDKVKNE------RYGVAPsvafgLGTanrLYLNYLHVTQNNTPDGGIPTIGL 271
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 292 DSYT----RSKYGDETNRLYRQNYSLTwNGGWDNGVTTSNWVQYEH-----------TRNSRIPEG-LAGGTEGKFNEKA 355
Cdd:PRK09840 272 PGYSapsaGRAALNHAGKVDTHNFYGT-DSDYDDSTTDTATMRFEHdindnttlrntTRWSRVKQDyLLTAIMGGASNIT 350
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 356 TQDFVDI------------DLDDVMLHSEVNLPIDFL---VNQTLTLGTEWNQQRMKDLSSNTQALTGTN--------TG 412
Cdd:PRK09840 351 TPTPSDVntwtwsrtantkDVSNKILTNQTNLTSTFYtgsIGHDVSTGVEFTRETQTNYGVNPVTLPAVNlyhpdssiHP 430
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 413 GAID--GVSATDRSpyskaEIFSLFAENNMELTDSTIVTPGLRFDHHSIVGNNWS---------PALNISQGLG----DD 477
Cdd:PRK09840 431 GGLTrnGANANGQT-----DTFAIYAFDTLQLTRDWELNGGIRLDNYHTEYDSATacggsgrgaITCPAGVAKGspvtTV 505
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 478 FTLKMGIARAYKAPSLYQTNPN---YILYSKGQgcyASAGGCYLQ----------GNDDLKAETSINKEIGLEF----KR 540
Cdd:PRK09840 506 DTAKSGNLVNWKAGALYKLTENgnvYINYAVSQ---QPPGGSNFAlaqsgsgnsaNRTDFKPQKANTSEIGTKWqvldKR 582
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 541 DGWLAGVtwFRNDYRNKIEagyvavgQNAVGTdlyqWDNVPKAVVEGLEgsLNVPVSETVMWTNNITYMLKSENKTTG-- 618
Cdd:PRK09840 583 LLLTAAL--FRTDIENEVE-------QNDDGT----YSQYGKKRVEGYE--LSVAGNITPAWQVIAGYTQQKATVKNGkd 647
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 619 ------DRLSIIPEYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYNYKGQPAVgpetkeISPYSIVGLSATWDVTKNVS 692
Cdd:PRK09840 648 vaqdgsSSLPYTPEHAFTLWSQYQATDDLSVGGGARYIGSMHRGSDGAVGTPAF------TEGYWVADAKLGYRVNRNLD 721
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*...
gi 1425613064 693 LTGGVDNLFDKrlwragnaqttgdlagaNYIAG--AGAYTYNePG--RTWYMSINTHF 746
Cdd:PRK09840 722 LQLNVYNLFDT-----------------DYVASinKSGYRYH-PGepRTFLLTANMHF 761
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
34-746 |
2.92e-13 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 73.52 E-value: 2.92e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 34 DTIVVT----AAEQNLQ----APGV-STITADEIRKNPvARDVSEIIRTMPGVnltgnSTSGQRGNNRQIDIRGMGPENT 104
Cdd:TIGR01782 2 DAVQVTgqraSLEKAIDakrdADSVvDVISAEDIGKLP-DVNVAEALQRVPGV-----SIERDQGEGRYVSVRGLGPSYN 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 105 LILIDGKPVSSrnsvrqgwrGERDTRG-DTSWVPPEMIERIEVLRGPAAARYGnGAAGGVVNIITKKG--SGEWHGSWDA 181
Cdd:TIGR01782 76 RTTLNGRTIAS---------TDSGGRAfSLDLLPSELVSGVEVYKTPTADMDE-GGIGGTVDLRTRSPfdYDGRTLSGSA 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 182 yfnAPEHKEEGATKRTNFSLTGPLGDEF---SFRLYGNLDKTQADawDINQGHQSARAGTYATTlPAGREGVIN------ 252
Cdd:TIGR01782 146 ---QGGYNDLAGKDKPGPRGAASYSWTFgdgQFGVLLSASYQKRD--FAEDNVETENWGTYTSA-DGGAQGLYFprgvry 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 253 -------KDINGVVRWDFAPLQSLEL------------------------------------EAGYSRQGNLYAGDTQNT 289
Cdd:TIGR01782 220 rsyrndrERKGVNGSLQWRPSDALELyldtlyskydddetrqqiefrtlnggstvitsnqtaTSGALVQGTVANLQILVE 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 290 NSD---------------------------SYTRSKYG-DETNRLYRQNYSLTWNGGWDNGVTTSNWVQYEHTRNSRI-- 339
Cdd:TIGR01782 300 ARYneeketttsltlggewtgdrwtldgdlGYSKATRDrPDRVTRFFTAPTPGYDFDYRGGPTLTLGTPADGDDASNYtn 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 340 PEGL-----------AGGTEGKFNEKATQDFVDIDL-------------DDVMLHSEVNLPIDFLVNQTLTLGTE----- 390
Cdd:TIGR01782 380 PANGelrrtqisyqkAEDSEDAAQLDATFDGPFTSLkfgvryrrrdktnRGSRYRRSIIGATGASGLAGVPSDLAgagld 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 391 -WNQQRMKDLSSNT------QALTGTNTGGAIDGVSATDRSPYSKAEIFSLFAENNMELTDSTIVTPGLRFDH--HSIVG 461
Cdd:TIGR01782 460 gGLGGPLTGWDPADldaflnAARGDAAGGGTYTYASTAPNTYTVTEDTTAAYAMANFDTGLRLRGNVGVRYERtdQTSDG 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 462 -----------------------NNWSPALNISQGLGDDFTLKMGIARAYKAPSLYQTNPNY--ILYSKGQGCYASaggc 516
Cdd:TIGR01782 540 wqsqpaangtgsvlvpvsadrdyTDVLPSLNLAYDLTDDLVLRFAASKTITRPDFGDLAANTslSDDGTGGTVTVS---- 615
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 517 ylQGNDDLKAETSINKEIGLEFK-RDGWLAGVTWFRNDYRNKI-EAGYVAVGQNAVGTDLYQWD-----NVPKA-VVEGL 588
Cdd:TIGR01782 616 --GGNPDLKPYESDNLDLSLEWYfGPGGLLSAAVFYKDIKNFIvTTTSTETNDGGGGLVVAGVLvsrpvNGGKAgKIRGV 693
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 589 E-------GSLNVPVSETVMWTnNITYmLKSENK-------TTGDRLSIIPEYTLNSTLSWQaREDLSMQTTFTWYGKQq 654
Cdd:TIGR01782 694 ElgyqqtfDFLPGPLSGFGVQA-NYTY-VDSEADpsvdgvqRRKLPLPGLSKNTANATLYYE-KGGFSARLSYNYRSDY- 769
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 655 pkkYNYKGQPAVGPETKEISPYSIVGLSATWDVTKNVSLTGGVDNLFDKRL-WRAGNAQTTGDlaganyiagagaytYNE 733
Cdd:TIGR01782 770 ---LLDVGGSNINRLDRYVDPRGQLDLSASYQVSDHLSLGLQASNLTNEPSrWYTGGKQRPRE--------------YVE 832
|
890
....*....|...
gi 1425613064 734 PGRTWYMSINTHF 746
Cdd:TIGR01782 833 TGRTYMLGLRYKF 845
|
|
| OMP_RagA_SusC |
TIGR04056 |
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade ... |
50-171 |
8.48e-11 |
|
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 274948 [Multi-domain] Cd Length: 981 Bit Score: 65.69 E-value: 8.48e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 50 VSTITADEIRKNPVARDVSEIIRTMPGVNLTgnSTSGQRGNNRQIDIRGM----GPENTLILIDGKPVSSrnsvrqgwrg 125
Cdd:TIGR04056 98 VSTVKAKELKKVPVSNLSNALQGKVAGVIIT--QSSGEPGGDAEIWIRGIssfgGNNSPLYVIDGVPRDN---------- 165
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1425613064 126 erdtrgDTSWVPPEMIERIEVLRGPAA-ARYGNGAAGGVVNIITKKG 171
Cdd:TIGR04056 166 ------GLSDLNPEDIESISVLKDASAtAIYGSRGANGVILITTKRG 206
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
2-240 |
3.74e-10 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 63.24 E-value: 3.74e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 2 NKKIHSLALLVNLGIYGVAQAQEPTDTPvsHDDTIVVTAA---EQNLQAPgVSTITADE----------IRKNP-----V 63
Cdd:PRK10044 10 NHSLRKIAVVVATAVSGMSVYAQAAVEP--KEETITVTAApapQESAWGP-AATIAAKRsatgtktdtpIEKTPqsisvV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 64 ARD---------VSEIIRTMPGVnltgnsTSGQRGNNRQID---IRGMGPENTlilidgkpvsSRNSVRQGWRGERDTRG 131
Cdd:PRK10044 87 TAEemalhqpksVKEALSYTPGV------SVGTRGASNTYDhliIRGFAASGQ----------SQNNYLDGLKLQGNFYN 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 132 DTSwVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGSGE------WHGSWDAYFnapehkeegatkRTNFSLTGPL 205
Cdd:PRK10044 151 DAV-IDPYMLERAELMRGPVSVLYGKSNPGGLLNMVSKRPTTEplkevqFKMGTDNLF------------QTGFDFSDAL 217
|
250 260 270
....*....|....*....|....*....|....*..
gi 1425613064 206 GD--EFSFRLYGNldktqadAWDINQGHQSARAGTYA 240
Cdd:PRK10044 218 DDdgVYSYRLTGL-------ARSANAQQKGSEEQRYA 247
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
50-174 |
4.18e-08 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 56.73 E-value: 4.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 50 VSTITADEIRKNPVARDVSEIIRTMPGVnltgnsTSGQRGNNRQID---IRGMGPENTLILIDGKPVSSrnsvrQGWRGE 126
Cdd:PRK14050 83 VSVVGRQEMDDRGVTNKVDEALRYTPGV------LSQPFGTDGDTDwfyIRGFDATQTGVFLDGLNLFS-----YGFGGF 151
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1425613064 127 RdtrgdtswVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGSGE 174
Cdd:PRK14050 152 Q--------IDPFMLERVEVLKGPASVLYGGSNPGGIVNMVSKRPLDE 191
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
7-215 |
1.91e-04 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 44.89 E-value: 1.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 7 SLALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTAAEQN---------------------------LQAP-GVSTITADEI 58
Cdd:PRK14049 12 ALAGTSALALVATAQAQDAGQESVSNEASTALETLVVNggsggvitadgyvatssatgakvdtpfLETPqSISSVTEQQL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 59 R-KNPvaRDVSEIIRTMPGVNltgnstsgqrgnnrqIDIRGMGPENTLILIDGKPVSSRNSVRQGWRgerDTRGDTSW-- 135
Cdd:PRK14049 92 KdRNP--QTLLETLAYTPGAR---------------VGAFGFDPRFDAFFVRGFDVTYTGVFRDNLR---QPGASSSIfk 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425613064 136 VPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGSGE-------WHGSWDAYfnapehkeegatkRTNFSLTGPL--G 206
Cdd:PRK14049 152 TEPYGLEGVSILRGPSSALYGASGAGGLFNLITKRPTEEplrevqvQYGTNNRY-------------QGQFDFSGPVneT 218
|
....*....
gi 1425613064 207 DEFSFRLYG 215
Cdd:PRK14049 219 DPVYYRLTG 227
|
|
| |
