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EscV/YscV/HrcV family type III secretion system export apparatus protein [Escherichia coli]
Protein Classification
EscV/YscV/HrcV family type III secretion system export apparatus protein ( domain architecture ID 10015070 )
EscV/YscV/HrcV family type III secretion system export apparatus protein similar to Salmonella enterica invasion protein InvA involved in the invasion of the cells of the intestinal epithelium
List of domain hits
Name
Accession
Description
Interval
E-value
PRK15337
PRK15337 EscV/YscV/HrcV family type III secretion system export apparatus protein;
1-686
0e+00
EscV/YscV/HrcV family type III secretion system export apparatus protein;
Pssm-ID: 237946 [Multi-domain]
Cd Length: 686
Bit Score: 1112.75
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 1 M F N KV L IGL RS H PELIIL G LMVMIIAMLIIPLPTYL I DFLIGLN LT LAILVF L GSFY V DRILSFS S FPSILLITTLFRLA 80
Cdd:PRK15337 1 M L N SL L NQA RS R PELIIL V LMVMIIAMLIIPLPTYL V DFLIGLN IV LAILVF M GSFY I DRILSFS T FPSILLITTLFRLA 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 81 L A ISTSRLILL E ADAGEIIT S FG E FVIGDSLVVGFVIFSIVT I VQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADL R 160
Cdd:PRK15337 81 L S ISTSRLILL D ADAGEIIT T FG Q FVIGDSLVVGFVIFSIVT V VQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADL K 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 161 AGIIDAD LA KERRSVLERESQLYGSFDGAMKFIKGDAIA N IIIIFVN I IGG L SVG VG Q N GMD F S T AL TV YTILT V GDGLV 240
Cdd:PRK15337 161 AGIIDAD GV KERRSVLERESQLYGSFDGAMKFIKGDAIA G IIIIFVN L IGG I SVG MT Q H GMD L S S AL ST YTILT I GDGLV 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 241 S QIPALLI A ISAGFIVTRVNGDSDN M G Q NIMSQLLSN S FV II VT CV LALSIGLLPGFPL L VFL C LAV I LG IY FYFK F --- 317
Cdd:PRK15337 241 A QIPALLI S ISAGFIVTRVNGDSDN L G R NIMSQLLSN P FV LV VT AI LALSIGLLPGFPL P VFL L LAV V LG VL FYFK K frk 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 318 - KK KGVQETVVE G DITVGLEPYN qdd DI SLG I I NK LD Q VI T ETVPL V L IMNSVQAKKYTEI NLA D R I RSQFFI E YG I R I P 396
Cdd:PRK15337 321 k KK SAAEPDTSG G EAPLDIDEKA --- GS SLG L I GD LD K VI P ETVPL I L LVPEARRPDLEKE NLA E R L RSQFFI D YG V R L P 397
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 397 G I VI R EG EGL N D EDVILML N AV RA S QF K IY H DL VLL V E YSDE V VS TL I k K P V I VN S N GEQYYWV TKS D AQ KL T K I G CYT R 476
Cdd:PRK15337 398 D I LL R YS EGL D D NSIVVLI N EI RA A QF T IY F DL HRV V N YSDE L VS LG I - N P T I ID S G GEQYYWV PHE D TE KL A K L G YVL R 476
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 477 T A M DE M Y NH LSV C L A HNINE Y FGIQETK YI LDQLE M KYPDLLKE IL R YI TVQRISEV I QRL IQ ERIS V RNM R L V MEALAL 556
Cdd:PRK15337 477 S A I DE L Y HC LSV L L L HNINE F FGIQETK HL LDQLE K KYPDLLKE VY R HA TVQRISEV L QRL LS ERIS I RNM K L I MEALAL 556
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 557 W S PREKD I I T LVEHVRGAL G RYICHKF SYS GE IK A I V I S P E I ED R IR D G V R P T A GGTFLNLD AS E A E MIL D NFK LAL SGI 636
Cdd:PRK15337 557 W A PREKD V I M LVEHVRGAL A RYICHKF AAG GE LR A V V L S A E V ED A IR K G I R Q T S GGTFLNLD PA E S E NLM D LLT LAL DDL 636
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 1425738720 637 N I PIK DI I LL G SVDIRRF I KKLIE SSYRD LEVLS Y GE LTEN V P VN IL KTI 686
Cdd:PRK15337 637 G I AHR DI V LL V SVDIRRF V KKLIE GRFPE LEVLS F GE IADS V E VN VI KTI 686
Name
Accession
Description
Interval
E-value
PRK15337
PRK15337 EscV/YscV/HrcV family type III secretion system export apparatus protein;
1-686
0e+00
EscV/YscV/HrcV family type III secretion system export apparatus protein;
Pssm-ID: 237946 [Multi-domain]
Cd Length: 686
Bit Score: 1112.75
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 1 M F N KV L IGL RS H PELIIL G LMVMIIAMLIIPLPTYL I DFLIGLN LT LAILVF L GSFY V DRILSFS S FPSILLITTLFRLA 80
Cdd:PRK15337 1 M L N SL L NQA RS R PELIIL V LMVMIIAMLIIPLPTYL V DFLIGLN IV LAILVF M GSFY I DRILSFS T FPSILLITTLFRLA 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 81 L A ISTSRLILL E ADAGEIIT S FG E FVIGDSLVVGFVIFSIVT I VQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADL R 160
Cdd:PRK15337 81 L S ISTSRLILL D ADAGEIIT T FG Q FVIGDSLVVGFVIFSIVT V VQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADL K 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 161 AGIIDAD LA KERRSVLERESQLYGSFDGAMKFIKGDAIA N IIIIFVN I IGG L SVG VG Q N GMD F S T AL TV YTILT V GDGLV 240
Cdd:PRK15337 161 AGIIDAD GV KERRSVLERESQLYGSFDGAMKFIKGDAIA G IIIIFVN L IGG I SVG MT Q H GMD L S S AL ST YTILT I GDGLV 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 241 S QIPALLI A ISAGFIVTRVNGDSDN M G Q NIMSQLLSN S FV II VT CV LALSIGLLPGFPL L VFL C LAV I LG IY FYFK F --- 317
Cdd:PRK15337 241 A QIPALLI S ISAGFIVTRVNGDSDN L G R NIMSQLLSN P FV LV VT AI LALSIGLLPGFPL P VFL L LAV V LG VL FYFK K frk 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 318 - KK KGVQETVVE G DITVGLEPYN qdd DI SLG I I NK LD Q VI T ETVPL V L IMNSVQAKKYTEI NLA D R I RSQFFI E YG I R I P 396
Cdd:PRK15337 321 k KK SAAEPDTSG G EAPLDIDEKA --- GS SLG L I GD LD K VI P ETVPL I L LVPEARRPDLEKE NLA E R L RSQFFI D YG V R L P 397
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 397 G I VI R EG EGL N D EDVILML N AV RA S QF K IY H DL VLL V E YSDE V VS TL I k K P V I VN S N GEQYYWV TKS D AQ KL T K I G CYT R 476
Cdd:PRK15337 398 D I LL R YS EGL D D NSIVVLI N EI RA A QF T IY F DL HRV V N YSDE L VS LG I - N P T I ID S G GEQYYWV PHE D TE KL A K L G YVL R 476
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 477 T A M DE M Y NH LSV C L A HNINE Y FGIQETK YI LDQLE M KYPDLLKE IL R YI TVQRISEV I QRL IQ ERIS V RNM R L V MEALAL 556
Cdd:PRK15337 477 S A I DE L Y HC LSV L L L HNINE F FGIQETK HL LDQLE K KYPDLLKE VY R HA TVQRISEV L QRL LS ERIS I RNM K L I MEALAL 556
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 557 W S PREKD I I T LVEHVRGAL G RYICHKF SYS GE IK A I V I S P E I ED R IR D G V R P T A GGTFLNLD AS E A E MIL D NFK LAL SGI 636
Cdd:PRK15337 557 W A PREKD V I M LVEHVRGAL A RYICHKF AAG GE LR A V V L S A E V ED A IR K G I R Q T S GGTFLNLD PA E S E NLM D LLT LAL DDL 636
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 1425738720 637 N I PIK DI I LL G SVDIRRF I KKLIE SSYRD LEVLS Y GE LTEN V P VN IL KTI 686
Cdd:PRK15337 637 G I AHR DI V LL V SVDIRRF V KKLIE GRFPE LEVLS F GE IADS V E VN VI KTI 686
EscV
COG4789 Type III secretory pathway, component EscV [Intracellular trafficking, secretion, and ...
6-686
0e+00
Type III secretory pathway, component EscV [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 443818 [Multi-domain]
Cd Length: 688
Bit Score: 956.17
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 6 L IGLRSHPE L IILG L M V M II A M L I I PLPTYL I D F LI G LN L T LAI L VFLGSF Y VDRI L S FS S FPS I LLITTLFRLAL A IST 85
Cdd:COG4789 2 L NAASGRSD L VLAA L L V A II F M M I L PLPTYL V D I LI A LN I T ISV L LLMVAM Y IPSP L A FS T FPS V LLITTLFRLAL S IST 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 86 S RLILL E ADAG E II TS FG E FV I G DS LVVG F VIF S I V T I VQFIVITKGSERVAEVAARFSLD G MPGKQMSIDADLRAG I ID 165
Cdd:COG4789 82 T RLILL Q ADAG H II ET FG N FV V G GN LVVG L VIF L I I T V VQFIVITKGSERVAEVAARFSLD A MPGKQMSIDADLRAG V ID 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 166 AD L A KE RR SV LE R ESQLYG SF DGAMKF I KGDAIA N IIII F VNIIGG LSV GV G Q N GM DF S T AL TV Y T ILT V GDGLV S QIPA 245
Cdd:COG4789 162 AD E A RR RR AL LE K ESQLYG AM DGAMKF V KGDAIA G IIII L VNIIGG IAI GV L Q H GM SA S E AL HT Y S ILT I GDGLV A QIPA 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 246 LLI A I S AG F IVTRV N GD - SD N M G QN I M SQLL SNSFVIIVTC VL A L SIG L L PGFP L LVFL C LA VI LG IYFYFKFKK K GVQE 324
Cdd:COG4789 242 LLI S I T AG I IVTRV S GD e DS N L G RE I V SQLL AQPKALLIAA VL L L LFA L I PGFP T LVFL L LA AL LG GLGFKLLRR K RRAA 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 325 TVV E GDITVG L EPYNQDDD i SL G I I NKL D qv ITE TVPL V L IMNSVQ A KKYTEIN L A --- D R I R SQF F IEY G IRI PGI V IR 401
Cdd:COG4789 322 AAA E SEPLPA L QAAGAKGS - EA G L I DGD D -- FPP TVPL I L RLSPSL A PALEAEA L N qei R R L R NRL F EDL G VPL PGI H IR 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 402 EGE GL N D EDVILM LN A V RASQFKIYHDLV L LVEYS DE VVSTL I KKPVIVNSN GE Q - YY WV TKSD A QK L T K I G CYT R T A M D 480
Cdd:COG4789 399 FNP GL P D DEYSIL LN E V PVARGTLPPGHL L VRDDV DE LEALG I PAEEGELPL GE G p SL WV PAEH A EL L E K A G IKV R D A E D 478
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 481 EMYN HLS VC L AHNIN E YF GIQET K Y I LDQ L E M KYP D L L KE IL R YITV QRI S EV I QRL IQ E R IS V RN M RL VM EAL AL W S P R 560
Cdd:COG4789 479 VLAL HLS LV L RRHAA E FI GIQET R Y L LDQ M E K KYP E L V KE VQ R VLPL QRI A EV L QRL VE E G IS I RN L RL IL EAL IE W G P K 558
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 561 EKD IIT L V E H VR G AL G RYICH KF S YS - G EIK A IVIS PEIE DR IR DGV R P T AG G T FL N LD ASEAEM IL DNFKL AL SGINIP 639
Cdd:COG4789 559 EKD VVM L T E Y VR I AL K RYICH RY S GG q G TLP A LLLD PEIE EM IR GAI R Q T SA G S FL A LD PEQSQA IL EQLRQ AL GPLPPG 638
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 1425738720 640 IK D II LL G S V DIRRF IK KLIE SSYR DL E VLSY G ELT ENVP V NI L KT I 686
Cdd:COG4789 639 GQ D PV LL T S M DIRRF VR KLIE REFP DL P VLSY Q ELT PEIR V QP L GR I 685
hrcV
TIGR01399 type III secretion protein, HrcV family; Members of this family are closely homologous to the ...
11-686
0e+00
type III secretion protein, HrcV family; Members of this family are closely homologous to the flagellar biosynthesis protein FlhA (TIGR01398) and should all participate in type III secretion systems. Examples include InvA (Salmonella enterica), LcrD (Yersinia enterocolitica), HrcV (Xanthomonas), etc. Type III secretion systems resemble flagellar biogenesis systems, and may share the property of translocating special classes of peptides through the membrane. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Pssm-ID: 273600 [Multi-domain]
Cd Length: 677
Bit Score: 791.93
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 11 SHPE L IILG L MVM II A M L I I PLPT Y L I D F LI GL N L T LAI L VFLGSF Y VD R I L SF S S FPS I LLITTLFRLAL A IST S RLIL 90
Cdd:TIGR01399 1 ARSD L VLAL L LLA II S M M I L PLPT L L V D I LI AI N I T ISV L LLMIAI Y IP R P L AL S T FPS V LLITTLFRLAL S IST T RLIL 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 91 L E ADAG E II TS FG E FV I G DS L V VG F VIF S I V TIVQFIVITKGSERVAEV A ARFSLD G MPGKQMSIDADLRAG I IDAD L A K 170
Cdd:TIGR01399 81 L H ADAG N II EA FG Q FV V G GN L A VG L VIF L I I TIVQFIVITKGSERVAEV S ARFSLD A MPGKQMSIDADLRAG V IDAD E A R 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 171 E RRS V LE R ESQLYG SF DGAMKF I KGDAIA N III IFV NIIGG L S V GV G Q N GM DF S T AL TV YT I LT V GDGLVSQIPALLI AI 250
Cdd:TIGR01399 161 R RRS T LE K ESQLYG AM DGAMKF V KGDAIA G III VLI NIIGG I S I GV T Q H GM SA S E AL HL YT V LT I GDGLVSQIPALLI SV 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 251 S AG F IVTRV N G DSD - N M G QN I MS QL L S NSFVIIVTC VL A L SIG L L PGFPLLVF LC LAV I L GIYF Y FKFKK K GVQETVVEG 329
Cdd:TIGR01399 241 T AG I IVTRV P G EAE r N L G RE I GH QL T S QPRALLLAA VL L L GFA L I PGFPLLVF AL LAV L L AAAG Y LLSRR K RSRAKANKA 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 330 DITVGLEP ynqd DDISLGI I NK LD QV i T E TV PL V L IMNSVQAK --- K Y T EINLAD R I R SQF F IEY GI RI PGI V IR E G EG L 406
Cdd:TIGR01399 321 QASGAVAS ---- APGAAAP I KN LD PF - A E AC PL I L RLSPDLQS sad K D T LDQEIE R M R WAL F EDL GI PL PGI I IR V G DS L 395
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 407 N D EDVILM L NA V RASQFK I YHDL V L L VEYS D EVVSTL I KKPVIVNSN GE - Q YY WVT KSD A Q KL TKI G CYTRTAMDEMYNH 485
Cdd:TIGR01399 396 P D NEFRIL L YE V PVLRDT I PPGH V A L NDGV D NIEVAG I PAISGKRWP GE s Q RV WVT EEG A E KL QGA G LGYFSDSQVITHR 475
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 486 L SVC L AH N IN E YF GIQET K Y I LDQ L E MK YP D L L KE IL R YITV QRI S EV I QRL IQ E RI S V RN M RL VM E A L AL W SP REKD II 565
Cdd:TIGR01399 476 L KAT L LR N AQ E FI GIQET R Y L LDQ M E RE YP E L V KE VQ R VLPL QRI A EV L QRL VS E QV S I RN L RL IL E T L IE W AQ REKD VV 555
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 566 T L V E H VR G AL G RYICH KFSYS G E - IK A IV I S PEIE DR IR DGV R P T AG GT F L N LD ASEA E MI LD NFKL A LSGINIPIKDII 644
Cdd:TIGR01399 556 M L T E Y VR I AL K RYICH RYANG G R q LS A VL I D PEIE EL IR GAI R Q T ST GT Y L A LD PDDS E QL LD QIRQ A VGDLPRAPSQPV 635
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 1425738720 645 LL G S V DIRR FIK K L IES SYR DL E VLSY G EL T E NVP V NI L KT I 686
Cdd:TIGR01399 636 LL T S M DIRR YVR K M IES EFP DL P VLSY Q EL G E EIE V QV L GR I 677
FHIPEP
pfam00771 FHIPEP family;
24-677
0e+00
FHIPEP family;
Pssm-ID: 459933
Cd Length: 645
Bit Score: 696.45
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 24 I I AM L I I PLP TY L I D F L IGL N LT L AI L VF L GSF Y VD R I L S FS S FP SI LLITTLFRLAL AISTS RLILL EAD -- AG EI I TS 101
Cdd:pfam00771 1 I L AM M I L PLP PF L L D L L LAF N IA L SL L IL L VAL Y IK R P L D FS V FP TL LLITTLFRLAL NVAST RLILL HGH ea AG KV I EA 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 102 FG E FV I G DSL VVG F V I F S I VT IVQFIVITKG S ERVAEVAARF S LD G MPGKQM S IDADL R AG I ID ADL A KE RR SV L E RE SQ 181
Cdd:pfam00771 81 FG Q FV V G GNY VVG L V V F L I LV IVQFIVITKG A ERVAEVAARF T LD A MPGKQM A IDADL N AG L ID EEE A RR RR EE L Q RE AD 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 182 L YG SF DGA M KF I KGDAIA N III IFV NIIGGL SV GV G Q N GM D F ST A LTV YT I LT V GDGLVSQIPALLI AIS AG F IVTRV NG 261
Cdd:pfam00771 161 F YG AM DGA S KF V KGDAIA G III TLI NIIGGL II GV L Q H GM S F GE A AQT YT L LT I GDGLVSQIPALLI STA AG I IVTRV AS 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 262 D s D N M G QN I MS QL LS N SFVIIVTCVLA L SI GL L PG F P L L V FL C LA VI LG IYF Y FKFKK K GVQETVVEGDITVGLEPYNQD 341
Cdd:pfam00771 241 E - G N L G EE I VG QL FA N PKALYIAAGVL L LL GL I PG L P T L P FL L LA AL LG FLA Y RLRRR K KKAAAEEAEAEEAAAAAVLPV 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 342 D DIS L GIINK L dqvitet V PL vlimns V QAKKYTE in L A DRI --- R S Q FFI E Y G IRI P G I V IR EGEG L NDEDVILMLNA V 418
Cdd:pfam00771 320 D PLE L ELGYG L ------- I PL ------ V DESQGGD -- L L DRI kgi R R Q LAL E L G FVV P P I R IR DNLQ L KPNEYRIKIKG V 384
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 419 RASQFKIYH D LV L LVE y SDE V VSTLIKK P VIVNSN G EQYY W VTKSDAQKLTKI G CYTRTAMDEMYN HL SVCLAHNIN E YF 498
Cdd:pfam00771 385 EVARGELLP D HL L AMN - PGG V LGEIPGI P TKEPAF G LPAV W IDEEQREEAELA G YTVVDPPTVIAT HL TEVIKRHAA E LL 463
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 499 G I QE TKYI LD Q L EMK YP D L LK E IL - RYITVQR I SE V I Q R L IQ ER I S V R NM R LVM E A LA LWS P RE KD IIT L V E H VR G ALGR 577
Cdd:pfam00771 464 G R QE VQAL LD N L KKE YP K L VE E LV p KLLSLGE I QK V L Q N L LR ER V S I R DL R TIL E T LA DYA P KT KD PDL L T E Y VR Q ALGR 543
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 578 Y IC HKFSYS - G EIKA I VIS PE I E DRI R DGVRPTA G - G TF L N LD ASE A EMI L DNFKL A LSGINIPIKDII LL G S V DIRR FI 655
Cdd:pfam00771 544 Q IC QQYAGE d G TLPV I TLD PE L E QLL R ESLQQSE G q G SY L A LD PDL A QRL L EALSE A VEKLEQQGEPPV LL T S P DIRR YL 623
650 660
....*....|....*....|..
gi 1425738720 656 KK L I E SSYR DL E VLSY G E LTEN 677
Cdd:pfam00771 624 RR L L E RFLP DL P VLSY N E IPPD 645
Name
Accession
Description
Interval
E-value
PRK15337
PRK15337 EscV/YscV/HrcV family type III secretion system export apparatus protein;
1-686
0e+00
EscV/YscV/HrcV family type III secretion system export apparatus protein;
Pssm-ID: 237946 [Multi-domain]
Cd Length: 686
Bit Score: 1112.75
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 1 M F N KV L IGL RS H PELIIL G LMVMIIAMLIIPLPTYL I DFLIGLN LT LAILVF L GSFY V DRILSFS S FPSILLITTLFRLA 80
Cdd:PRK15337 1 M L N SL L NQA RS R PELIIL V LMVMIIAMLIIPLPTYL V DFLIGLN IV LAILVF M GSFY I DRILSFS T FPSILLITTLFRLA 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 81 L A ISTSRLILL E ADAGEIIT S FG E FVIGDSLVVGFVIFSIVT I VQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADL R 160
Cdd:PRK15337 81 L S ISTSRLILL D ADAGEIIT T FG Q FVIGDSLVVGFVIFSIVT V VQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADL K 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 161 AGIIDAD LA KERRSVLERESQLYGSFDGAMKFIKGDAIA N IIIIFVN I IGG L SVG VG Q N GMD F S T AL TV YTILT V GDGLV 240
Cdd:PRK15337 161 AGIIDAD GV KERRSVLERESQLYGSFDGAMKFIKGDAIA G IIIIFVN L IGG I SVG MT Q H GMD L S S AL ST YTILT I GDGLV 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 241 S QIPALLI A ISAGFIVTRVNGDSDN M G Q NIMSQLLSN S FV II VT CV LALSIGLLPGFPL L VFL C LAV I LG IY FYFK F --- 317
Cdd:PRK15337 241 A QIPALLI S ISAGFIVTRVNGDSDN L G R NIMSQLLSN P FV LV VT AI LALSIGLLPGFPL P VFL L LAV V LG VL FYFK K frk 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 318 - KK KGVQETVVE G DITVGLEPYN qdd DI SLG I I NK LD Q VI T ETVPL V L IMNSVQAKKYTEI NLA D R I RSQFFI E YG I R I P 396
Cdd:PRK15337 321 k KK SAAEPDTSG G EAPLDIDEKA --- GS SLG L I GD LD K VI P ETVPL I L LVPEARRPDLEKE NLA E R L RSQFFI D YG V R L P 397
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 397 G I VI R EG EGL N D EDVILML N AV RA S QF K IY H DL VLL V E YSDE V VS TL I k K P V I VN S N GEQYYWV TKS D AQ KL T K I G CYT R 476
Cdd:PRK15337 398 D I LL R YS EGL D D NSIVVLI N EI RA A QF T IY F DL HRV V N YSDE L VS LG I - N P T I ID S G GEQYYWV PHE D TE KL A K L G YVL R 476
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 477 T A M DE M Y NH LSV C L A HNINE Y FGIQETK YI LDQLE M KYPDLLKE IL R YI TVQRISEV I QRL IQ ERIS V RNM R L V MEALAL 556
Cdd:PRK15337 477 S A I DE L Y HC LSV L L L HNINE F FGIQETK HL LDQLE K KYPDLLKE VY R HA TVQRISEV L QRL LS ERIS I RNM K L I MEALAL 556
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 557 W S PREKD I I T LVEHVRGAL G RYICHKF SYS GE IK A I V I S P E I ED R IR D G V R P T A GGTFLNLD AS E A E MIL D NFK LAL SGI 636
Cdd:PRK15337 557 W A PREKD V I M LVEHVRGAL A RYICHKF AAG GE LR A V V L S A E V ED A IR K G I R Q T S GGTFLNLD PA E S E NLM D LLT LAL DDL 636
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 1425738720 637 N I PIK DI I LL G SVDIRRF I KKLIE SSYRD LEVLS Y GE LTEN V P VN IL KTI 686
Cdd:PRK15337 637 G I AHR DI V LL V SVDIRRF V KKLIE GRFPE LEVLS F GE IADS V E VN VI KTI 686
EscV
COG4789 Type III secretory pathway, component EscV [Intracellular trafficking, secretion, and ...
6-686
0e+00
Type III secretory pathway, component EscV [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 443818 [Multi-domain]
Cd Length: 688
Bit Score: 956.17
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 6 L IGLRSHPE L IILG L M V M II A M L I I PLPTYL I D F LI G LN L T LAI L VFLGSF Y VDRI L S FS S FPS I LLITTLFRLAL A IST 85
Cdd:COG4789 2 L NAASGRSD L VLAA L L V A II F M M I L PLPTYL V D I LI A LN I T ISV L LLMVAM Y IPSP L A FS T FPS V LLITTLFRLAL S IST 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 86 S RLILL E ADAG E II TS FG E FV I G DS LVVG F VIF S I V T I VQFIVITKGSERVAEVAARFSLD G MPGKQMSIDADLRAG I ID 165
Cdd:COG4789 82 T RLILL Q ADAG H II ET FG N FV V G GN LVVG L VIF L I I T V VQFIVITKGSERVAEVAARFSLD A MPGKQMSIDADLRAG V ID 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 166 AD L A KE RR SV LE R ESQLYG SF DGAMKF I KGDAIA N IIII F VNIIGG LSV GV G Q N GM DF S T AL TV Y T ILT V GDGLV S QIPA 245
Cdd:COG4789 162 AD E A RR RR AL LE K ESQLYG AM DGAMKF V KGDAIA G IIII L VNIIGG IAI GV L Q H GM SA S E AL HT Y S ILT I GDGLV A QIPA 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 246 LLI A I S AG F IVTRV N GD - SD N M G QN I M SQLL SNSFVIIVTC VL A L SIG L L PGFP L LVFL C LA VI LG IYFYFKFKK K GVQE 324
Cdd:COG4789 242 LLI S I T AG I IVTRV S GD e DS N L G RE I V SQLL AQPKALLIAA VL L L LFA L I PGFP T LVFL L LA AL LG GLGFKLLRR K RRAA 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 325 TVV E GDITVG L EPYNQDDD i SL G I I NKL D qv ITE TVPL V L IMNSVQ A KKYTEIN L A --- D R I R SQF F IEY G IRI PGI V IR 401
Cdd:COG4789 322 AAA E SEPLPA L QAAGAKGS - EA G L I DGD D -- FPP TVPL I L RLSPSL A PALEAEA L N qei R R L R NRL F EDL G VPL PGI H IR 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 402 EGE GL N D EDVILM LN A V RASQFKIYHDLV L LVEYS DE VVSTL I KKPVIVNSN GE Q - YY WV TKSD A QK L T K I G CYT R T A M D 480
Cdd:COG4789 399 FNP GL P D DEYSIL LN E V PVARGTLPPGHL L VRDDV DE LEALG I PAEEGELPL GE G p SL WV PAEH A EL L E K A G IKV R D A E D 478
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 481 EMYN HLS VC L AHNIN E YF GIQET K Y I LDQ L E M KYP D L L KE IL R YITV QRI S EV I QRL IQ E R IS V RN M RL VM EAL AL W S P R 560
Cdd:COG4789 479 VLAL HLS LV L RRHAA E FI GIQET R Y L LDQ M E K KYP E L V KE VQ R VLPL QRI A EV L QRL VE E G IS I RN L RL IL EAL IE W G P K 558
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 561 EKD IIT L V E H VR G AL G RYICH KF S YS - G EIK A IVIS PEIE DR IR DGV R P T AG G T FL N LD ASEAEM IL DNFKL AL SGINIP 639
Cdd:COG4789 559 EKD VVM L T E Y VR I AL K RYICH RY S GG q G TLP A LLLD PEIE EM IR GAI R Q T SA G S FL A LD PEQSQA IL EQLRQ AL GPLPPG 638
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 1425738720 640 IK D II LL G S V DIRRF IK KLIE SSYR DL E VLSY G ELT ENVP V NI L KT I 686
Cdd:COG4789 639 GQ D PV LL T S M DIRRF VR KLIE REFP DL P VLSY Q ELT PEIR V QP L GR I 685
hrcV
TIGR01399 type III secretion protein, HrcV family; Members of this family are closely homologous to the ...
11-686
0e+00
type III secretion protein, HrcV family; Members of this family are closely homologous to the flagellar biosynthesis protein FlhA (TIGR01398) and should all participate in type III secretion systems. Examples include InvA (Salmonella enterica), LcrD (Yersinia enterocolitica), HrcV (Xanthomonas), etc. Type III secretion systems resemble flagellar biogenesis systems, and may share the property of translocating special classes of peptides through the membrane. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Pssm-ID: 273600 [Multi-domain]
Cd Length: 677
Bit Score: 791.93
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 11 SHPE L IILG L MVM II A M L I I PLPT Y L I D F LI GL N L T LAI L VFLGSF Y VD R I L SF S S FPS I LLITTLFRLAL A IST S RLIL 90
Cdd:TIGR01399 1 ARSD L VLAL L LLA II S M M I L PLPT L L V D I LI AI N I T ISV L LLMIAI Y IP R P L AL S T FPS V LLITTLFRLAL S IST T RLIL 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 91 L E ADAG E II TS FG E FV I G DS L V VG F VIF S I V TIVQFIVITKGSERVAEV A ARFSLD G MPGKQMSIDADLRAG I IDAD L A K 170
Cdd:TIGR01399 81 L H ADAG N II EA FG Q FV V G GN L A VG L VIF L I I TIVQFIVITKGSERVAEV S ARFSLD A MPGKQMSIDADLRAG V IDAD E A R 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 171 E RRS V LE R ESQLYG SF DGAMKF I KGDAIA N III IFV NIIGG L S V GV G Q N GM DF S T AL TV YT I LT V GDGLVSQIPALLI AI 250
Cdd:TIGR01399 161 R RRS T LE K ESQLYG AM DGAMKF V KGDAIA G III VLI NIIGG I S I GV T Q H GM SA S E AL HL YT V LT I GDGLVSQIPALLI SV 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 251 S AG F IVTRV N G DSD - N M G QN I MS QL L S NSFVIIVTC VL A L SIG L L PGFPLLVF LC LAV I L GIYF Y FKFKK K GVQETVVEG 329
Cdd:TIGR01399 241 T AG I IVTRV P G EAE r N L G RE I GH QL T S QPRALLLAA VL L L GFA L I PGFPLLVF AL LAV L L AAAG Y LLSRR K RSRAKANKA 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 330 DITVGLEP ynqd DDISLGI I NK LD QV i T E TV PL V L IMNSVQAK --- K Y T EINLAD R I R SQF F IEY GI RI PGI V IR E G EG L 406
Cdd:TIGR01399 321 QASGAVAS ---- APGAAAP I KN LD PF - A E AC PL I L RLSPDLQS sad K D T LDQEIE R M R WAL F EDL GI PL PGI I IR V G DS L 395
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 407 N D EDVILM L NA V RASQFK I YHDL V L L VEYS D EVVSTL I KKPVIVNSN GE - Q YY WVT KSD A Q KL TKI G CYTRTAMDEMYNH 485
Cdd:TIGR01399 396 P D NEFRIL L YE V PVLRDT I PPGH V A L NDGV D NIEVAG I PAISGKRWP GE s Q RV WVT EEG A E KL QGA G LGYFSDSQVITHR 475
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 486 L SVC L AH N IN E YF GIQET K Y I LDQ L E MK YP D L L KE IL R YITV QRI S EV I QRL IQ E RI S V RN M RL VM E A L AL W SP REKD II 565
Cdd:TIGR01399 476 L KAT L LR N AQ E FI GIQET R Y L LDQ M E RE YP E L V KE VQ R VLPL QRI A EV L QRL VS E QV S I RN L RL IL E T L IE W AQ REKD VV 555
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 566 T L V E H VR G AL G RYICH KFSYS G E - IK A IV I S PEIE DR IR DGV R P T AG GT F L N LD ASEA E MI LD NFKL A LSGINIPIKDII 644
Cdd:TIGR01399 556 M L T E Y VR I AL K RYICH RYANG G R q LS A VL I D PEIE EL IR GAI R Q T ST GT Y L A LD PDDS E QL LD QIRQ A VGDLPRAPSQPV 635
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 1425738720 645 LL G S V DIRR FIK K L IES SYR DL E VLSY G EL T E NVP V NI L KT I 686
Cdd:TIGR01399 636 LL T S M DIRR YVR K M IES EFP DL P VLSY Q EL G E EIE V QV L GR I 677
FHIPEP
pfam00771 FHIPEP family;
24-677
0e+00
FHIPEP family;
Pssm-ID: 459933
Cd Length: 645
Bit Score: 696.45
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 24 I I AM L I I PLP TY L I D F L IGL N LT L AI L VF L GSF Y VD R I L S FS S FP SI LLITTLFRLAL AISTS RLILL EAD -- AG EI I TS 101
Cdd:pfam00771 1 I L AM M I L PLP PF L L D L L LAF N IA L SL L IL L VAL Y IK R P L D FS V FP TL LLITTLFRLAL NVAST RLILL HGH ea AG KV I EA 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 102 FG E FV I G DSL VVG F V I F S I VT IVQFIVITKG S ERVAEVAARF S LD G MPGKQM S IDADL R AG I ID ADL A KE RR SV L E RE SQ 181
Cdd:pfam00771 81 FG Q FV V G GNY VVG L V V F L I LV IVQFIVITKG A ERVAEVAARF T LD A MPGKQM A IDADL N AG L ID EEE A RR RR EE L Q RE AD 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 182 L YG SF DGA M KF I KGDAIA N III IFV NIIGGL SV GV G Q N GM D F ST A LTV YT I LT V GDGLVSQIPALLI AIS AG F IVTRV NG 261
Cdd:pfam00771 161 F YG AM DGA S KF V KGDAIA G III TLI NIIGGL II GV L Q H GM S F GE A AQT YT L LT I GDGLVSQIPALLI STA AG I IVTRV AS 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 262 D s D N M G QN I MS QL LS N SFVIIVTCVLA L SI GL L PG F P L L V FL C LA VI LG IYF Y FKFKK K GVQETVVEGDITVGLEPYNQD 341
Cdd:pfam00771 241 E - G N L G EE I VG QL FA N PKALYIAAGVL L LL GL I PG L P T L P FL L LA AL LG FLA Y RLRRR K KKAAAEEAEAEEAAAAAVLPV 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 342 D DIS L GIINK L dqvitet V PL vlimns V QAKKYTE in L A DRI --- R S Q FFI E Y G IRI P G I V IR EGEG L NDEDVILMLNA V 418
Cdd:pfam00771 320 D PLE L ELGYG L ------- I PL ------ V DESQGGD -- L L DRI kgi R R Q LAL E L G FVV P P I R IR DNLQ L KPNEYRIKIKG V 384
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 419 RASQFKIYH D LV L LVE y SDE V VSTLIKK P VIVNSN G EQYY W VTKSDAQKLTKI G CYTRTAMDEMYN HL SVCLAHNIN E YF 498
Cdd:pfam00771 385 EVARGELLP D HL L AMN - PGG V LGEIPGI P TKEPAF G LPAV W IDEEQREEAELA G YTVVDPPTVIAT HL TEVIKRHAA E LL 463
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 499 G I QE TKYI LD Q L EMK YP D L LK E IL - RYITVQR I SE V I Q R L IQ ER I S V R NM R LVM E A LA LWS P RE KD IIT L V E H VR G ALGR 577
Cdd:pfam00771 464 G R QE VQAL LD N L KKE YP K L VE E LV p KLLSLGE I QK V L Q N L LR ER V S I R DL R TIL E T LA DYA P KT KD PDL L T E Y VR Q ALGR 543
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 578 Y IC HKFSYS - G EIKA I VIS PE I E DRI R DGVRPTA G - G TF L N LD ASE A EMI L DNFKL A LSGINIPIKDII LL G S V DIRR FI 655
Cdd:pfam00771 544 Q IC QQYAGE d G TLPV I TLD PE L E QLL R ESLQQSE G q G SY L A LD PDL A QRL L EALSE A VEKLEQQGEPPV LL T S P DIRR YL 623
650 660
....*....|....*....|..
gi 1425738720 656 KK L I E SSYR DL E VLSY G E LTEN 677
Cdd:pfam00771 624 RR L L E RFLP DL P VLSY N E IPPD 645
FlhA
COG1298 Flagellar biosynthesis protein FlhA [Cell motility];
15-686
0e+00
Flagellar biosynthesis protein FlhA [Cell motility];
Pssm-ID: 440909 [Multi-domain]
Cd Length: 676
Bit Score: 570.45
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 15 L IILGLMVM I I AM L I I PLP TY L I D F L IGL N LT L AI L VF L GSF Y VD R I L S FS S FP SI LLITTLFRL A L AISTS RLILLE -- 92
Cdd:COG1298 1 L AVPLGVIA I L AM M I L PLP PF L L D L L LAF N IA L SL L IL L VAL Y IK R P L D FS V FP TL LLITTLFRL S L NVAST RLILLE gh 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 93 --- AD AG EI I TS FGEFV I G DSL VVG F V I F S I VT I VQ F I VITKG SE R V AEVAARF S LD G MPGKQM S IDADL R AG I ID ADL A 169
Cdd:COG1298 81 egt DA AG KV I EA FGEFV V G GNY VVG L V V F L I LV I IN F V VITKG AG R I AEVAARF T LD A MPGKQM A IDADL N AG L ID EEE A 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 170 KE RR SVLE RE SQL YG SF DGA M KF IK GDAIA N I I I IFV NIIGGL SV GV G Q N GM D F ST A LTV YT I LT V GDGLVSQIPALLI A 249
Cdd:COG1298 161 RR RR EEIQ RE ADF YG AM DGA S KF VR GDAIA G I L I TLI NIIGGL II GV L Q H GM S F GE A AQT YT L LT I GDGLVSQIPALLI S 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 250 IS AG F IVTR V n G DSDNM G QNIMS QL LS N SFVIIVTCVLALSI GL L PG F P L L V FL C LA VI LG IYF Y FKF K KKGVQ E TVVEG 329
Cdd:COG1298 241 TA AG I IVTR A - G SEGDL G EQLSG QL FA N PKALYIAAGVLGLL GL I PG M P H L P FL L LA AL LG GLA Y RLK K RQKEE E AEEAA 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 330 DITVGLEP y NQDDDI S LGIINKL D QVIT E T ---- V PLV L imnsvq AKKYTE in L A DRI RS --- Q FFI E Y G IRI P GIV IR E 402
Cdd:COG1298 320 AAAEAEAA - AEPAEE S VDDLLPV D PLEL E L gygl I PLV D ------ ESQGGD -- L L DRI KG irr Q LAQ E L G FVV P PVR IR D 390
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 403 GEG L NDEDVILMLNA V RASQFKIYH D LV L LVE y SDE V VST L IKK P VIVNSN G EQYY W VTKSDAQKLTKI G CYTRTAMDEM 482
Cdd:COG1298 391 NLQ L KPNEYRIKIKG V EVARGELRP D RL L AIN - PGG V TGE L PGI P TKEPAF G LPAV W IDPEQREEAELL G YTVVDPSTVI 469
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 483 YN HLS VCLAHNIN E YF G I QE TKYI LD Q L EMK YP ---- D L LKEI L RYITV Q R ise V I Q R L IQ ER I S V R NM R LVM E A LA LWS 558
Cdd:COG1298 470 AT HLS EVIKRHAA E LL G R QE VQQL LD R L KKE YP klve E L VPKL L SLGEL Q K --- V L Q N L LR ER V S I R DL R TIL E T LA DYA 546
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 559 PR E KD IIT L V EHVR G ALGR Y I CHKF - SYS GE IKA I VIS PE I E DRIRDGVRP T AG G TF L N LD ASE A EMI L DNF ----- KL A 632
Cdd:COG1298 547 PR T KD PDL L T EHVR Q ALGR Q I VQQY a GPD GE LPV I TLD PE L E QLLLESLQQ T EQ G SY L A LD PGL A QRL L QSL aeave KL E 626
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 1425738720 633 LS G IN ipikd II LL G S VDI R RFIKK L I E SSYR DL E VLSY G E LTEN V PVNILK T I 686
Cdd:COG1298 627 AQ G EP ----- PV LL V S PQL R PYLRR L L E RFLP DL P VLSY N E IPPD V EIESVG T V 675
PRK12720
PRK12720 EscV/YscV/HrcV family type III secretion system export apparatus protein;
16-686
0e+00
EscV/YscV/HrcV family type III secretion system export apparatus protein;
Pssm-ID: 183699 [Multi-domain]
Cd Length: 675
Bit Score: 561.26
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 16 I I L GL M VMI - IA M L I I PLPT YLI D F LI GL NL TLAILVFLGSF Y VDRI L S FS S FPS I LLITTL F RLAL A ISTSRL I LL EA D 94
Cdd:PRK12720 17 I V L AV M LLV a VF M M I L PLPT WMV D I LI AI NL MFSVILLMIAI Y LRDP L E FS V FPS L LLITTL Y RLAL T ISTSRL V LL QH D 96
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 95 AGEI ITS FG E FV I G DS L V VG FVI F S I V TIVQFIVITKGSERVAEV A ARFSLDGMPGKQMSID A D L RAG I IDAD L A KER R S 174
Cdd:PRK12720 97 AGEI VDA FG K FV V G GN L A VG LIV F T I I TIVQFIVITKGSERVAEV S ARFSLDGMPGKQMSID G D M RAG V IDAD E A RRL R Q 176
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 175 VLER ES Q L Y G SF DGAMKF I KGDAIA N II I I F VNIIGG LSV GV G Q NG M DF S T A LTV Y TI L TV GDGL VS QIP A LLI A I S AG F 254
Cdd:PRK12720 177 HVQK ES R L L G AM DGAMKF V KGDAIA G II V I L VNIIGG III GV M Q HD M SA S E A VNT Y AV L SI GDGL CG QIP S LLI S I T AG I 256
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 255 IVTRV N G DS - D N MGQNIM SQ LLSNSFVIIVTC V LALSIG L L PGFP LLV F LC LA VIL - GIYFYFKF KK KG V QETV VE GD it 332
Cdd:PRK12720 257 IVTRV P G EK r Q N LANELS SQ IGRQPQALWLAA V VLMLFA L I PGFP FIT F AF LA ALV a APAILLRR KK SV V SANG VE AG -- 334
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 333 v G L E PYNQD D DISL G iinkldqvite TV PL V L - IMNSVQAKKYTE in LA D RI R SQF F IEY G IRI P GIV I REGEG L NDEDV 411
Cdd:PRK12720 335 - G S E EGPEG D SMVP G ----------- AC PL M L r LAPTLHSADLIR -- DI D AL R WFL F EDL G VPL P EVN I EVDPE L TEKTL 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 412 ILM L NAVRASQFKIYHDLV LL VE ysd EVVST L IKKPVIVNSNGE Q YY W V TK SD A QKLTKI G CYTRTAMDEMYNH L SVC L A 491
Cdd:PRK12720 401 TVL L YQEPVLSLSLPPQAL LL LI --- GPDAS L VGDSQTLPNGMG Q IC W L TK DQ A EQAQGF G LDVFAGSQRISAL L KCV L L 477
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 492 HNIN E YF G I QET K Y IL D QL E MK Y PD L L KE IL R YIT V QR I S E VI QRL IQ ER I S V R NM R LVMEA L AL W S PREKD IIT L V E H V 571
Cdd:PRK12720 478 RYMG E FI G V QET R Y LM D AM E KR Y GE L V KE LQ R QLP V GK I A E IL QRL VS ER V S I R DL R TIFGT L VE W A PREKD VVM L T E Y V 557
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 572 R G AL G R Y I CHK F SYS G E - IKAIV I SPE IE DR IR DGV R P T AG GT FLN L DASEAEM IL DNFKL AL S gini PIKDII L LG SVD 650
Cdd:PRK12720 558 R I AL R R H I LRR F NHE G K w LPVLR I GEG IE NL IR ESI R Q T SA GT YSA L SSRHSTQ IL QLIEQ AL K ---- QSQKLV L VT SVD 633
650 660 670
....*....|....*....|....*....|....*.
gi 1425738720 651 I RRF IK K L IE SSYR DL E VLS YG EL TENVPVNILKT I 686
Cdd:PRK12720 634 V RRF LR K I IE RTLF DL P VLS WQ EL GDEAEIKVVGS I 669
flhA
PRK06012 flagellar type III secretion system protein FlhA;
6-686
0e+00
flagellar type III secretion system protein FlhA;
Pssm-ID: 235672 [Multi-domain]
Cd Length: 697
Bit Score: 544.72
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 6 LIG L RSHPE L IILG L MVM I I AM L I I PLP TY L I D F L IGL N LT L AI L VF L GSFYVD R I L S FS S FP SI LLITTL F RLAL AIST 85
Cdd:PRK06012 12 NLK L LKWRD L AVAI L VLA I L AM M I L PLP PF L L D L L LTF N IA L SV L IL L VALFIQ R P L D FS A FP TL LLITTL L RLAL NVAS 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 86 S RLILLE ----- AD AG EI I TS FG E FV I G DSL VVG F V I F S I VT I VQ F I VITKG SE R V AEVAARF S LD G MPGKQM S IDADL R 160
Cdd:PRK06012 92 T RLILLE ghegt DA AG KV I EA FG H FV V G GNF VVG I V V F I I LV I IN F V VITKG AG R I AEVAARF T LD A MPGKQM A IDADL N 171
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 161 AG I ID ADL AK E RR SV L ER E SQL YG SF DGA M KF I KGDAIA N I I I IFV NIIGGL SV GV G Q N GM D F ST A LTV YT I LT V GDGLV 240
Cdd:PRK06012 172 AG L ID EEE AK K RR KE L QQ E ADF YG AM DGA S KF V KGDAIA G I L I TVI NIIGGL II GV V Q H GM S F GE A AET YT L LT I GDGLV 251
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 241 SQIPALLI AIS AG F IVTRV n GDSDNM G QN I MS QL LS N SFVIIVTCVLALSI GL L PG F P L L V FL C LA VI LG IYF Y FKF K KK 320
Cdd:PRK06012 252 SQIPALLI STA AG I IVTRV - SSDGDV G EQ I VG QL FA N PKALYIAAGVLFLL GL V PG M P H L P FL L LA GL LG FLA Y RLR K RE 330
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 321 gv QETVVEGDITVGL E PYNQDDDI S LGIINKL D QVIT E T ---- V PLV L imnsvq AKKYT E in L A DRIRS --- QFFI E Y G I 393
Cdd:PRK06012 331 -- KKAAELAAEEAEE E EAAEPEEE S WDDVLPV D PLEL E V gygl I PLV D ------ ENQGG E -- L L DRIRS irk KIAQ E L G F 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 394 RI P GIV IR EGEG L NDEDVILMLNA V RASQFKIYHDLV L LV --- EYSD E VVSTLI K K P VI vnsn G EQYY W VTKSDAQKLTK 470
Cdd:PRK06012 401 LV P PVR IR DNLQ L PPNEYRIKIKG V EVGSGELRPGRL L AM npg GVDG E LPGIPT K E P AF ---- G LPAV W IDEALREQAQL 476
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 471 I G CYTRTAMDEMYN HL SVCLAHNIN E YF G I QE TKYI LD Q L EMK YP D L LK E I ---- L RYI T V Q R ise V I Q R L IQ ER I S V R N 546
Cdd:PRK06012 477 L G YTVVDPSTVVAT HL TEVIKNHAA E LL G R QE VQQL LD R L AKE YP K L VE E L vpkv L SLG T L Q K --- V L Q N L LK ER V S I R D 553
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 547 M R LVM E A LA LWS P RE KD IIT L V EHVR GA LGR Y I CHK - FSYS GE IKA I VIS PE I E DRIRDGVRP T A GG TF L N L DASE AE MI 625
Cdd:PRK06012 554 L R TIL E T LA DYA P IT KD PDE L T EHVR QR LGR Q I VQQ y KGED GE LPV I TLD PE L E QLLLQSLQG T G GG SY L A L EPGL AE RL 633
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1425738720 626 L DNFKL AL SGINIPIKDII LL G S VDI R RFIKK L I E SSYRD L E VLSY G E LTE N VPVN I LK T I 686
Cdd:PRK06012 634 L QSLQE AL ERQEMKGEPPV LL V S PAL R PYLRR L L E RFLPQ L P VLSY N E IPD N IEIR I VG T V 694
FlhA
TIGR01398 flagellar biosynthesis protein FlhA; This model describes flagellar biosynthesis protein FlhA, ...
13-686
3.11e-165
flagellar biosynthesis protein FlhA; This model describes flagellar biosynthesis protein FlhA, one of a large number of genes associated with the biosynthesis of functional bacterial flagella. Homologs of many such proteins, including FlhA, function in type III protein secretion systems. A separate model describes InvA (Salmonella enterica), LcrD (Yersinia enterocolitica), HrcV (Xanthomonas), etc., all of which score below the noise cutoff for this model. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 273599 [Multi-domain]
Cd Length: 678
Bit Score: 490.24
E-value: 3.11e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 13 PE L IILGLM V M I I A ML I I PLP TY L I D F L IG LN LT L AI L VF L GSFYVDRI L S FSSFP SI LLI T TLFRL A L AISTS RLIL LE 92
Cdd:TIGR01398 2 RD L LLAIGV V A I L A VM I L PLP AF L L D I L LA LN IA L SL L IL L VTLFIQKP L D FSSFP TL LLI A TLFRL S L NVAST RLIL TH 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 93 AD ----- AG EI I TS FG E FV I G DSL V V G FVI F S I VT IV Q FIVITKG SE R V AEVAARF S LD G MPGKQM S IDADL R AG I I DAD 167
Cdd:TIGR01398 82 GH egpna AG KV I EA FG Q FV V G GNY V I G LIV F I I LI IV N FIVITKG AT R I AEVAARF T LD A MPGKQM A IDADL N AG L I TEE 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 168 L AK E RR SV LE R E SQL YG SF DGA M KF I KGDAIA N III IFV NIIGGL SV GV G Q N GM DF S T A LTV YTILT V GDGLV S QIPAL L 247
Cdd:TIGR01398 162 E AK K RR EE LE Q E ADF YG AM DGA S KF V KGDAIA G III TLI NIIGGL II GV V Q H GM SL S D A AST YTILT I GDGLV A QIPAL I 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 248 I AISA G F IVTR V n GDSDNM G QN I MS QL LS N SFVIIVTCVLALSIG L L PG F P LLV FL C LA VI L GIYFYFKFKKKGVQ E TVV 327
Cdd:TIGR01398 242 I STAT G L IVTR A - SSEGSF G KA I VT QL GA N PRALLIVAAVLGLLA L V PG L P TFP FL F LA GA L AFLAWYLRRRSKQE E EAA 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 328 E g DITVGL E PYNQDDDI S LGI I NK LD QVIT E T ---- V PLV L imnsvq AKKYTE in L A DRIRS --- Q FFI EYG IRI P G I V I 400
Cdd:TIGR01398 321 A - EAAKAQ E EAAEEEEE S IND I LA LD DLEL E L gygl I PLV D ------ DSQGGD -- L L DRIRS irk Q LAQ EYG FVM P V I R I 391
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 401 R EGEG L - ND E DV I LMLNAVR A S q FKIYHDLV L LVE y SDEVVSTLIKKPVIVNSN G EQY YW VTKSDAQKLTKI G CYTRTAM 479
Cdd:TIGR01398 392 R DNLR L p PN E YR I KIKGVEV A R - GELRPGKY L AMN - PGNADGEIPGEETREPAF G LPA YW ISEKNKEEAERL G YTVVDPA 469
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 480 DEMYN HLS VCLAH N IN E YFGI QE TKYI LD Q L EMK YP D L LK E IL - RYITVQR I SE V I Q R L IQ ER I S V RN MRLVM E A LA LWS 558
Cdd:TIGR01398 470 TVLAT HLS EVIKN N AA E LLTR QE VQNL LD R L KEE YP K L VE E LI p DKVPLGT I QK V L Q L L LR ER V S I RN LPTIL E T LA DYA 549
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 559 P RE KD IIT LVEHVR GA LGR Y I CHKF - SYS G EIKA I VIS P EI E DRIRDGVRPTAG G TF L N L DASEA E MILDNFKL A LSGIN 637
Cdd:TIGR01398 550 P IT KD PDL LVEHVR QR LGR Q I TQQY l DED G VLPV I TLD P DL E AALAEALKRDGE G EL L D L EPALL E ELVRAVRK A VEKLA 629
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 1425738720 638 IPIKDII LL G S VDI R RFIKKLI E SSYRD L E VLSY G E LTE NV P V NILKTI 686
Cdd:TIGR01398 630 NNGERPV LL T S PRV R PYVRRIL E RFFPE L P VLSY N E IPD NV R V ETVGVV 678
flhA
PRK12792 flagellar biosynthesis protein FlhA; Reviewed
21-686
5.10e-103
flagellar biosynthesis protein FlhA; Reviewed
Pssm-ID: 237205
Cd Length: 694
Bit Score: 329.38
E-value: 5.10e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 21 M V M I I A M L II P L P TY LID FLIGLNLT L AI L VFLGSFYVD R I L S FS S FP SI LLI T TL F RLAL A I S T S RLIL L ----- EAD A 95
Cdd:PRK12792 24 I V A I L A V L FL P V P AV LID IGLAFSIA L SV L ILMVALWIQ R P L E FS A FP TV LLI A TL L RLAL N I A T T RLIL S ngqeg VDA A 103
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 96 G EI I TS F GE FV IGDSL V V G F V I F S I VTI V Q F I VITKG SE R V AEV A ARF S LD GM PGKQM S IDADL R AG I ID ADL A KE RR SV 175
Cdd:PRK12792 104 G HV I AG F SQ FV MSGDF V I G L V V F A I LIT V N F L VITKG AT R I AEV G ARF T LD AI PGKQM A IDADL S AG L ID DKE A QR RR RE 183
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 176 LE R ES QLY GS F DGA M KF IK GDAIA NI III F VNI I GG LSV GV GQN GM DFST A LT V Y T I L T VGDGLVSQIPAL LIAIS AG FI 255
Cdd:PRK12792 184 LE E ES AFF GS M DGA S KF VR GDAIA SL III A VNI F GG III GV TRH GM PLGQ A AD V F T K L S VGDGLVSQIPAL IVSLA AG LL 263
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 256 V TR v N G DSDNMG Q NIMS QL LSNSFVII V TCV L ALSIGLL PG F P L L V F LC L AVILGIYF Y FKFKKKGVQETVVEGDITVGL 335
Cdd:PRK12792 264 V SK - G G TRGSAE Q AVLG QL GAYPRALS V AAL L MFVLAIV PG L P F L P F AL L GGVMAFVA Y TIPRRRAARAAAEAAKVKREE 342
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 336 E PYNQDDDI S LG iinkl D Q VI T ETVP L V L IMNSVQAKKYTEIN LA D R --- I R SQ F FIE YG IRI P G I VIREGEG L ndedvi 412
Cdd:PRK12792 343 E SAQAEAKD S VK ----- E Q LR T AEIE L C L GKQLAAQLQGAHAE LA H R vak M R RK F AKQ YG FVV P E I KLTDSLS L ------ 411
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 413 lmln AVRAS Q F KI YHDL V --------- LLV EYS D EVVSTLIKKP V IVNSN G EQYY WV TKSD A QKLTKI G CYTRTAMDEMY 483
Cdd:PRK12792 412 ---- PPKTY Q I KI HGTV V atqelrpge LLV VVG D GPRPDVPGEE V REPAF G MKAL WV PDAF A NEVRRD G FEPVDNASVLL 487
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 484 N HLS VCLAH N INEYFGIQETKYI LD Q L EMK Y PD L LKE I L - RY I TVQRISE V IQR L IQ ER I S V RN MR L VM EA L A LWS P REK 562
Cdd:PRK12792 488 T HLS EVIRN N LPQLLSYKDMRAL LD R L DPE Y KR L IDD I C p SQ I SYSGLQA V LKL L LA ER V S I RN LH L IL EA V A EIA P HAR 567
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 563 DIITLV EHVR GALGRY IC HKF S YS G EI K AIVISPEIEDRIRDGVRPT A G G TFLNL D ASEA em ILDN F KLAL S GINIPIK D 642
Cdd:PRK12792 568 RAEQIA EHVR MRIAQQ IC GDL S DN G VL K VLRLGNRWDLAFHQSLKRD A K G EVVEF D IDPR -- LVEQ F GTEA S EAIRERM D 645
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 1425738720 643 ---- II L LGSVDI R RFIKKL IE SSYRD L E VLS YG E LTEN V PVNI L K TI 686
Cdd:PRK12792 646 qghq FV L VTAPEA R PYVRMI IE RLFPT L P VLS HL E IARG V EIKS L G TI 693
PRK05910
PRK05910 type III secretion system protein; Validated
24-683
1.47e-45
type III secretion system protein; Validated
Pssm-ID: 168293
Cd Length: 584
Bit Score: 171.51
E-value: 1.47e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 24 I IAM LI I PLP TY L I DF LIGL N LT L AILVFLGS F YVDRIL S FSS FPS IL L ITT L F RL A L AISTS R L IL LEAD A GEI I T S F G 103
Cdd:PRK05910 19 I LFT LI F PLP QW L L DF GLCI N FA L SLSIVFWV F SLRSSA S ARL FPS LF L YLC L L RL G L NLAST R W IL SSGW A SPL I F S L G 98
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 104 E F VIGD SL VVGFVIFSIVTI V Q F I VITKGSER V AEV A ARFSL DGM PGKQMS I DADL RA G IIDADLAKERRSV L ER ES QLY 183
Cdd:PRK05910 99 N F FSLG SL PAALTACLLLFL V N F L VITKGSER I AEV R ARFSL EAL PGKQMS L DADL VS G RASYSRVSKQKNS L LE ES DFF 178
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 184 GSFD G AMK F I KGDAI ANI I IIF VNI IGGLSV G VGQNGMDFSTA LTV ytilt V GD G LVSQ I PALL IAIS A GFIVTR V n G DS 263
Cdd:PRK05910 179 SAME G VFR F V KGDAI MSC I LLG VNI LAATFL G RATGYAVGDLW LTV ----- L GD A LVSQ V PALL TSCA A ATLISK V - G EK 252
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 264 DNMG Q NIMS -- QLLSNS F VI I V tc V L AL S IGLL PG F P LLVF L CLA V I L GIYFY fkf KKKGVQE tvvegditvglepynqd 341
Cdd:PRK05910 253 ESLL Q HLLD yy EQSRQH F RF I A -- L L LC S LACI PG A P KAPI L GFS V L L FLAYK --- NPSSGET ----------------- 310
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 342 ddis L GIINKLDQVITETV P lvlimnsvqa KKYTE -- I NL ADRI R SQF F I E Y G IRI P - G IV I R EG E glndedvilmlnav 418
Cdd:PRK05910 311 ---- L LFQKERFEFVELAL P ---------- DEGVG np A NL YRAA R EEI F Q E L G VVF P e E IV V R HV E -------------- 362
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 419 rasqfkiyhdlvllveysdevvstli KK P VIVN S n G EQY Y wvtksdaqk L TKIG C ytr T A MDEMYNH L svc LAHN I N E Y F 498
Cdd:PRK05910 363 -------------------------- SS P RLIF S - G QEV Y --------- L RELS C --- P A ILPSLRN L --- APEA I S E R F 400
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 499 giqe T K YILDQLEMKYPDLLK EI LR yitv QR ISE ----- VIQR L IQ ER I S VRNMRLVM EA L A LWSPRE K DIIT LVE H VR G 573
Cdd:PRK05910 401 ---- V K RLVEEFQEVAGISIE EI IP ---- KK ISE nslvf LLRA L VR ER V S LHLFPKIL EA I A VYGSQG K SSEE LVE K VR K 472
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425738720 574 A LG RY I CHK - FSYSGEIKA I V I SPEI E DR IRD GVRPT aggtfl N L D AS E AEMILDNFK L AL SG i NIPIKD I IL lg SVDI R 652
Cdd:PRK05910 473 Y LG KQ I GRS l WNRQDTLEV I T I DSHV E QF IRD SYSKS ------ N P D MN E KVVAQVKSL L ER SG - EGNFRA I VT -- GCET R 543
650 660 670
....*....|....*....|....*....|.
gi 1425738720 653 RFI KK LIESSYR DL E VLS YG EL T E NV P VNI L 683
Cdd:PRK05910 544 FEL KK MVDPYFP DL L VLS HS EL P E EI P ISL L 574
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
