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Conserved domains on  [gi|1431960718|gb|RCL49743|]
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MAG: DUF2973 domain-containing protein [Prochlorococcus sp. MED-G73]

Protein Classification

DUF2973 domain-containing protein( domain architecture ID 10567802)

DUF2973 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2973 pfam11189
Protein of unknown function (DUF2973); Some members in this family of proteins are annotated ...
 5-76 1.14e-24

Protein of unknown function (DUF2973); Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently they have no known function.


:

Pssm-ID: 431712  Cd Length: 68  Bit Score: 87.61  E-value: 1.14e-24
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1431960718  5 FLPFVYGLSVFVLLFLAARIMLNGFFSGQASFKIQNSfskkKGDDRTGLVTVHPELLDKDGSITDEDLLTVR 76
Cdd:pfam11189  1 MLHLLYILAFTVLAFLAVRNLIRSLITLSMDSQRGNN----SYKDRTGQVTPHPELLDEDGNLIDEPLLVMR 68
 
Name Accession Description Interval E-value
DUF2973 pfam11189
Protein of unknown function (DUF2973); Some members in this family of proteins are annotated ...
 5-76 1.14e-24

Protein of unknown function (DUF2973); Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently they have no known function.


Pssm-ID: 431712  Cd Length: 68  Bit Score: 87.61  E-value: 1.14e-24
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1431960718  5 FLPFVYGLSVFVLLFLAARIMLNGFFSGQASFKIQNSfskkKGDDRTGLVTVHPELLDKDGSITDEDLLTVR 76
Cdd:pfam11189  1 MLHLLYILAFTVLAFLAVRNLIRSLITLSMDSQRGNN----SYKDRTGQVTPHPELLDEDGNLIDEPLLVMR 68
 
Name Accession Description Interval E-value
DUF2973 pfam11189
Protein of unknown function (DUF2973); Some members in this family of proteins are annotated ...
 5-76 1.14e-24

Protein of unknown function (DUF2973); Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently they have no known function.


Pssm-ID: 431712  Cd Length: 68  Bit Score: 87.61  E-value: 1.14e-24
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1431960718  5 FLPFVYGLSVFVLLFLAARIMLNGFFSGQASFKIQNSfskkKGDDRTGLVTVHPELLDKDGSITDEDLLTVR 76
Cdd:pfam11189  1 MLHLLYILAFTVLAFLAVRNLIRSLITLSMDSQRGNN----SYKDRTGQVTPHPELLDEDGNLIDEPLLVMR 68
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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