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Conserved domains on  [gi|1433911394|gb|RCZ27856|]
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amino acid permease [Escherichia coli]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
2A0302 super family cl30120
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
12-482 1.06e-143

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00905:

Pssm-ID: 129983  Cd Length: 473  Bit Score: 420.62  E-value: 1.06e-143
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  12 QKLGLLALTSIVVSSMIGSGVDGLPQNMAENSAVGPVAIAWIVCGIGMFFISRTFIVLSNIRPDLQSGVYMYAREGFGRF 91
Cdd:TIGR00905   7 KKLGLFALTALVIGSMIGSGIFSLPQNLASVAGPGAVIIGWIITGVGMLALAFVFAILATKKPELDGGIYAYAREGFGPY 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  92 TAFNVAWGYWLMTIFSNVAFAIMVMDTLNYFLPGdFKGGNNIPSVIGASLLIWGFNFLVLSGTRIAGSINIVGTLAKLIP 171
Cdd:TIGR00905  87 IGFMSGWGYWLSAWIGNVAYAVLLFSALGYFFPL-FGSGNPVPSILGASVLLWVFTFLVLRGVRQAAFINTITTIAKLIP 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 172 LVAFIIILMLFMKYTTFADNVWGHSASkasqDLGSIFSQVTSPLSVALWSFIGVEGAVALSGRAKNKRDVGKATFIGFVV 251
Cdd:TIGR00905 166 LFLFIIIGWFWFKLDLFTADFWGHDVP----SLGSVFSQVKNTMLVTLWVFIGIEGAVVSSGRAKNKSDVGKATVLGTLG 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 252 SLIICLLVSILPFGVLTQHELSAIPTPSTAGILKIVVGEWGKIMIILGVLISVLTSWLAWTIICAELPMVAAQNGTFPKP 331
Cdd:TIGR00905 242 ALVIYILITLLSLGVLPQQELANLPNPSMAAVLEMIVGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPKI 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 332 FSKKNVKGSASVSLYISSAFMQIVVLLVYFSNDAWLAMLAISTLTVLPAYLMTTAYLFKLCISGEYasytTNHSRSAALV 411
Cdd:TIGR00905 322 FGRVNKNGAPSVALLLTNILIQLFLLLTLLTSSAYNVLVSLAVVMILVPYLLSAAYLLKLAKVGTY----PKIKNRKALI 397
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1433911394 412 SSIIGFVFCLFMFYASEIKYLAMVPVLLTLGVPLFIWARKKddRADKIFTLRELAFFILLLVLDIIVFILL 482
Cdd:TIGR00905 398 VGVIACVYSIWLLYAAGLKYLLLGFILYAPGIIFYGRARKE--RGKHVFNKKEILIATIIVIAAIIAIWLL 466
 
Name Accession Description Interval E-value
2A0302 TIGR00905
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
12-482 1.06e-143

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129983  Cd Length: 473  Bit Score: 420.62  E-value: 1.06e-143
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  12 QKLGLLALTSIVVSSMIGSGVDGLPQNMAENSAVGPVAIAWIVCGIGMFFISRTFIVLSNIRPDLQSGVYMYAREGFGRF 91
Cdd:TIGR00905   7 KKLGLFALTALVIGSMIGSGIFSLPQNLASVAGPGAVIIGWIITGVGMLALAFVFAILATKKPELDGGIYAYAREGFGPY 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  92 TAFNVAWGYWLMTIFSNVAFAIMVMDTLNYFLPGdFKGGNNIPSVIGASLLIWGFNFLVLSGTRIAGSINIVGTLAKLIP 171
Cdd:TIGR00905  87 IGFMSGWGYWLSAWIGNVAYAVLLFSALGYFFPL-FGSGNPVPSILGASVLLWVFTFLVLRGVRQAAFINTITTIAKLIP 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 172 LVAFIIILMLFMKYTTFADNVWGHSASkasqDLGSIFSQVTSPLSVALWSFIGVEGAVALSGRAKNKRDVGKATFIGFVV 251
Cdd:TIGR00905 166 LFLFIIIGWFWFKLDLFTADFWGHDVP----SLGSVFSQVKNTMLVTLWVFIGIEGAVVSSGRAKNKSDVGKATVLGTLG 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 252 SLIICLLVSILPFGVLTQHELSAIPTPSTAGILKIVVGEWGKIMIILGVLISVLTSWLAWTIICAELPMVAAQNGTFPKP 331
Cdd:TIGR00905 242 ALVIYILITLLSLGVLPQQELANLPNPSMAAVLEMIVGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPKI 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 332 FSKKNVKGSASVSLYISSAFMQIVVLLVYFSNDAWLAMLAISTLTVLPAYLMTTAYLFKLCISGEYasytTNHSRSAALV 411
Cdd:TIGR00905 322 FGRVNKNGAPSVALLLTNILIQLFLLLTLLTSSAYNVLVSLAVVMILVPYLLSAAYLLKLAKVGTY----PKIKNRKALI 397
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1433911394 412 SSIIGFVFCLFMFYASEIKYLAMVPVLLTLGVPLFIWARKKddRADKIFTLRELAFFILLLVLDIIVFILL 482
Cdd:TIGR00905 398 VGVIACVYSIWLLYAAGLKYLLLGFILYAPGIIFYGRARKE--RGKHVFNKKEILIATIIVIAAIIAIWLL 466
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
4-458 2.66e-58

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 198.97  E-value: 2.66e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394   4 DSTEKNNKQKLGLLALTSIVVSSMIGSGVDGLPQNMAENsAVGPVAIAWIVCGIGMFFISRTFIVLSNIRPDlQSGVYMY 83
Cdd:COG0531     3 RGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGL-AGPAAILAWLIAGLLALLVALSYAELASAFPR-AGGAYTY 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  84 AREGFGRFTAFNVAWGYWLMTIFSNVAFAIMVMDTLNYFLPGDFkggnnipSVIGASLLIWGFNFLVLSGTRIAGSINIV 163
Cdd:COG0531    81 ARRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGG-------SVLIALVLILLLTLLNLRGVKESAKVNNI 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 164 GTLAKLIPLVAFIIILMLFMKYTTFADNVWGHSAskasqdlgsiFSQVTSPLSVALWSFIGVEGAVALSGRAKN-KRDVG 242
Cdd:COG0531   154 LTVLKLLVLLLFIVVGLFAFDPANFTPFLPAGGG----------LSGVLAALALAFFAFTGFEAIANLAEEAKNpKRNIP 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 243 KATFIGFVVSLIICLLVSILPFGVLTQHELSAIPTPsTAGILKIVVGEWGKIMIILGVLISVLTSWLAWTIICAELPMVA 322
Cdd:COG0531   224 RAIILSLLIVGVLYILVSLALTGVVPYDELAASGAP-LADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAM 302
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 323 AQNGTFPKPFSKKNVK-GSASVSLYISSAfmqIVVLLVYFSNDAWLAMLAISTLTVLPAYLMTTAYLFKLCISGEyasYT 401
Cdd:COG0531   303 ARDGLLPKVFAKVHPRfGTPVNAILLTGV---IALLLLLLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRP---DL 376
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1433911394 402 TNHSRSAALVSSIIGFVFCLFMFYASEIKYLAMVPVLLTLGVPLFIWARKKDDRADK 458
Cdd:COG0531   377 PRPFRVPLPLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKLLK 433
PRK10644 PRK10644
arginine/agmatine antiporter;
12-427 2.83e-35

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 136.46  E-value: 2.83e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  12 QKLGLLALTSIVVSSMIGSGVDGLPQNMAensAVGPVAI-AWIVCGIGMFFISRTFIVLSNIRPDlQSGVYMYAREGFGR 90
Cdd:PRK10644    8 HKVGLIPVTLMVAGNIMGSGVFLLPANLA---STGGIAIyGWLVTIIGALGLSMVYAKMSSLDPS-PGGSYAYARRCFGP 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  91 FTAFNVAWGYWLMTIFSNVAFAIMVMDTLNYFLPgdfKGGNNIPSVIGASLLIWGFNFLVLSGTRIAGSINIVGTLAKLI 170
Cdd:PRK10644   84 FLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFP---ILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALI 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 171 PLVAFIIILMLFMKYTTFAD--NVWGHSAskasqdlgsiFSQVTSPLSVALWSFIGVEGAVALSGRAKN-KRDVGKATFI 247
Cdd:PRK10644  161 PIVGIAVFGWFWFRGETYMAawNVSGLGT----------FGAIQSTLNVTLWSFIGVESASVAAGVVKNpKRNVPIATIG 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 248 GFVVSLIICLLVSILPFGVLTQHELSAIPTPsTAGILKIVVGEWGKIMIILGVLISVLTSWLAWTIICAELPMVAAQNGT 327
Cdd:PRK10644  231 GVLIAAVCYVLSSTAIMGMIPNAALRVSASP-FGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGL 309
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 328 FPKPFSKKNVKGSASVSLYISSAFMQIVVLLVYFSNDA--WLAMLAISTLTVLPAYLMTTAYLfKLCISGEYAsyttnHS 405
Cdd:PRK10644  310 FPPIFARVNKAGTPVAGLLIVGVLMTIFQLSSISPNASkeFGLVSSVSVIFTLVPYLYTCAAL-LLLGHGHFG-----KA 383
                         410       420
                  ....*....|....*....|..
gi 1433911394 406 RSAALVSSIIGFVFCLFMFYAS 427
Cdd:PRK10644  384 RPAYLAVTLIAFVYCIWAVVGS 405
AA_permease_2 pfam13520
Amino acid permease;
14-426 8.45e-30

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 120.88  E-value: 8.45e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  14 LGLLALTSIVVSSMIGSGvdGLPQNMAENSAVGPVAIAWIVCGIGMFFISRTFIVLSNIRPDlQSGVYMYAREGFGRFTA 93
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSG--IFVAPLVASGGPALIVWGWIAAIIFSLAVGLVYAELSSALPR-SGGIYVYLENAFGKFVA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  94 FNVAWGYWLMTIFSNVAFAIMVMDTLNYFLPGDFkGGNNIPSVIGASLLIWGFNFLVLSGTRIAGSINIVGTLAKLIPLV 173
Cdd:pfam13520  78 FLAGWSNWFAYVLGLASSASVAASYLLSALGPDL-VPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLLPL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 174 AFIIILMLFMKYTTFADNVWGHsaskASQDLGSIFSQVTSPLSVALWSFIGVEGAVALSGRAKNkRDVGKATFIGFVVSL 253
Cdd:pfam13520 157 ILIIILGLVTADGGGFNLLSGE----WHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKK-RNVPKAIFIGVIIVG 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 254 IICLLVSILPFGVLTQHELSAI-PTPSTAGIL-KIVVGEWGKIMIILGVLISVLTSWLAWTIICAELPMVAAQNGTFPKP 331
Cdd:pfam13520 232 VLYILVNIAFFGVVPDDEIALSsGLGQVAALLfQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPFS 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 332 --FSKKNVKGSASVSLYISSAFMQIVVLLVYFSNDAWLAMLAISTLTVLPAYLMTTAYLFKLcisgeYASYTTNHSRSAA 409
Cdd:pfam13520 312 rfFAKVNKFGSPIRAIILTAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLIL-----RKKRPDLGRIPGR 386
                         410
                  ....*....|....*..
gi 1433911394 410 LVSSIIGFVFCLFMFYA 426
Cdd:pfam13520 387 WPVAIFGILFSLFLIVA 403
 
Name Accession Description Interval E-value
2A0302 TIGR00905
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
12-482 1.06e-143

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129983  Cd Length: 473  Bit Score: 420.62  E-value: 1.06e-143
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  12 QKLGLLALTSIVVSSMIGSGVDGLPQNMAENSAVGPVAIAWIVCGIGMFFISRTFIVLSNIRPDLQSGVYMYAREGFGRF 91
Cdd:TIGR00905   7 KKLGLFALTALVIGSMIGSGIFSLPQNLASVAGPGAVIIGWIITGVGMLALAFVFAILATKKPELDGGIYAYAREGFGPY 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  92 TAFNVAWGYWLMTIFSNVAFAIMVMDTLNYFLPGdFKGGNNIPSVIGASLLIWGFNFLVLSGTRIAGSINIVGTLAKLIP 171
Cdd:TIGR00905  87 IGFMSGWGYWLSAWIGNVAYAVLLFSALGYFFPL-FGSGNPVPSILGASVLLWVFTFLVLRGVRQAAFINTITTIAKLIP 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 172 LVAFIIILMLFMKYTTFADNVWGHSASkasqDLGSIFSQVTSPLSVALWSFIGVEGAVALSGRAKNKRDVGKATFIGFVV 251
Cdd:TIGR00905 166 LFLFIIIGWFWFKLDLFTADFWGHDVP----SLGSVFSQVKNTMLVTLWVFIGIEGAVVSSGRAKNKSDVGKATVLGTLG 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 252 SLIICLLVSILPFGVLTQHELSAIPTPSTAGILKIVVGEWGKIMIILGVLISVLTSWLAWTIICAELPMVAAQNGTFPKP 331
Cdd:TIGR00905 242 ALVIYILITLLSLGVLPQQELANLPNPSMAAVLEMIVGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPKI 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 332 FSKKNVKGSASVSLYISSAFMQIVVLLVYFSNDAWLAMLAISTLTVLPAYLMTTAYLFKLCISGEYasytTNHSRSAALV 411
Cdd:TIGR00905 322 FGRVNKNGAPSVALLLTNILIQLFLLLTLLTSSAYNVLVSLAVVMILVPYLLSAAYLLKLAKVGTY----PKIKNRKALI 397
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1433911394 412 SSIIGFVFCLFMFYASEIKYLAMVPVLLTLGVPLFIWARKKddRADKIFTLRELAFFILLLVLDIIVFILL 482
Cdd:TIGR00905 398 VGVIACVYSIWLLYAAGLKYLLLGFILYAPGIIFYGRARKE--RGKHVFNKKEILIATIIVIAAIIAIWLL 466
arg_ornith_anti TIGR03810
arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine ...
12-483 6.25e-131

arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 163522  Cd Length: 468  Bit Score: 387.48  E-value: 6.25e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  12 QKLGLLALTSIVVSSMIGSGVDGLPQNMAENSAVGPVAIAWIVCGIGMFFISRTFIVLSNIRPDLQSGVYMYAREGFGRF 91
Cdd:TIGR03810   1 KKLGLGALTALVVGSMIGSGIFSLPSDMAAGAAAGAVLIGWVITGVGMLALAFSFQNLANKKPELDGGVYSYAKAGFGPF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  92 TAFNVAWGYWLMTIFSNVAFAIMVMDTLNYFLPGdFKGGNNIPSVIGASLLIWGFNFLVLSGTRIAGSINIVGTLAKLIP 171
Cdd:TIGR03810  81 MGFISAWGYWLSAWLGNVAYATLLFSTLGYFFPI-FGGGNNPPSIIGASVLLWCVHFLVLRGVEGAAFINTITTIAKLVP 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 172 LVAFIIILMLFMKYTTFADNVWGHSASKASqdLGSIFSQVTSPLSVALWSFIGVEGAVALSGRAKNKRDVGKATFIGFVV 251
Cdd:TIGR03810 160 LFVFIVIGIFAFKGDTFTNDFWGNANGGFS--LGSVMTQVKNMMLVTVWVFIGIEGASMLSARAEKRSDVGKATVIGLIG 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 252 SLIICLLVSILPFGVLTQHELSAIPTPSTAGILKIVVGEWGKIMIILGVLISVLTSWLAWTIICAELPMVAAQNGTFPKP 331
Cdd:TIGR03810 238 VLAIYVLVSVLSYGIMTQAQLAGLKNPSMAYVLEHMVGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 332 FSKKNVKGSASVSLYISSAFMQIVVLLVYFSNDAWLAMLAISTLTVLPAYLMTTAYLFKLCISGEYAsyttnHSRSAALV 411
Cdd:TIGR03810 318 FGKENANGAPTNALWLTNGLIQIFLLTTLFSEQAYNFAISLATSAILVPYLWSAAYQVKLSWRGGQE-----RGRRKQLL 392
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1433911394 412 SSIIGFVFCLFMFYASEIKYLAMVPVLLTLGVPLFIWARKkdDRADKIFTLRELAFFILLLVLDIIVFILLH 483
Cdd:TIGR03810 393 IGLVALLYAVWLIYAAGLKYLLLSAILYAPGIYFYARARK--EKGGPVFTKGELLIFAAIVAGAVIAIYLLA 462
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
4-458 2.66e-58

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 198.97  E-value: 2.66e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394   4 DSTEKNNKQKLGLLALTSIVVSSMIGSGVDGLPQNMAENsAVGPVAIAWIVCGIGMFFISRTFIVLSNIRPDlQSGVYMY 83
Cdd:COG0531     3 RGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGL-AGPAAILAWLIAGLLALLVALSYAELASAFPR-AGGAYTY 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  84 AREGFGRFTAFNVAWGYWLMTIFSNVAFAIMVMDTLNYFLPGDFkggnnipSVIGASLLIWGFNFLVLSGTRIAGSINIV 163
Cdd:COG0531    81 ARRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGG-------SVLIALVLILLLTLLNLRGVKESAKVNNI 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 164 GTLAKLIPLVAFIIILMLFMKYTTFADNVWGHSAskasqdlgsiFSQVTSPLSVALWSFIGVEGAVALSGRAKN-KRDVG 242
Cdd:COG0531   154 LTVLKLLVLLLFIVVGLFAFDPANFTPFLPAGGG----------LSGVLAALALAFFAFTGFEAIANLAEEAKNpKRNIP 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 243 KATFIGFVVSLIICLLVSILPFGVLTQHELSAIPTPsTAGILKIVVGEWGKIMIILGVLISVLTSWLAWTIICAELPMVA 322
Cdd:COG0531   224 RAIILSLLIVGVLYILVSLALTGVVPYDELAASGAP-LADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAM 302
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 323 AQNGTFPKPFSKKNVK-GSASVSLYISSAfmqIVVLLVYFSNDAWLAMLAISTLTVLPAYLMTTAYLFKLCISGEyasYT 401
Cdd:COG0531   303 ARDGLLPKVFAKVHPRfGTPVNAILLTGV---IALLLLLLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRP---DL 376
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1433911394 402 TNHSRSAALVSSIIGFVFCLFMFYASEIKYLAMVPVLLTLGVPLFIWARKKDDRADK 458
Cdd:COG0531   377 PRPFRVPLPLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKLLK 433
PRK10644 PRK10644
arginine/agmatine antiporter;
12-427 2.83e-35

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 136.46  E-value: 2.83e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  12 QKLGLLALTSIVVSSMIGSGVDGLPQNMAensAVGPVAI-AWIVCGIGMFFISRTFIVLSNIRPDlQSGVYMYAREGFGR 90
Cdd:PRK10644    8 HKVGLIPVTLMVAGNIMGSGVFLLPANLA---STGGIAIyGWLVTIIGALGLSMVYAKMSSLDPS-PGGSYAYARRCFGP 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  91 FTAFNVAWGYWLMTIFSNVAFAIMVMDTLNYFLPgdfKGGNNIPSVIGASLLIWGFNFLVLSGTRIAGSINIVGTLAKLI 170
Cdd:PRK10644   84 FLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFP---ILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALI 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 171 PLVAFIIILMLFMKYTTFAD--NVWGHSAskasqdlgsiFSQVTSPLSVALWSFIGVEGAVALSGRAKN-KRDVGKATFI 247
Cdd:PRK10644  161 PIVGIAVFGWFWFRGETYMAawNVSGLGT----------FGAIQSTLNVTLWSFIGVESASVAAGVVKNpKRNVPIATIG 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 248 GFVVSLIICLLVSILPFGVLTQHELSAIPTPsTAGILKIVVGEWGKIMIILGVLISVLTSWLAWTIICAELPMVAAQNGT 327
Cdd:PRK10644  231 GVLIAAVCYVLSSTAIMGMIPNAALRVSASP-FGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGL 309
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 328 FPKPFSKKNVKGSASVSLYISSAFMQIVVLLVYFSNDA--WLAMLAISTLTVLPAYLMTTAYLfKLCISGEYAsyttnHS 405
Cdd:PRK10644  310 FPPIFARVNKAGTPVAGLLIVGVLMTIFQLSSISPNASkeFGLVSSVSVIFTLVPYLYTCAAL-LLLGHGHFG-----KA 383
                         410       420
                  ....*....|....*....|..
gi 1433911394 406 RSAALVSSIIGFVFCLFMFYAS 427
Cdd:PRK10644  384 RPAYLAVTLIAFVYCIWAVVGS 405
AA_permease_2 pfam13520
Amino acid permease;
14-426 8.45e-30

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 120.88  E-value: 8.45e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  14 LGLLALTSIVVSSMIGSGvdGLPQNMAENSAVGPVAIAWIVCGIGMFFISRTFIVLSNIRPDlQSGVYMYAREGFGRFTA 93
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSG--IFVAPLVASGGPALIVWGWIAAIIFSLAVGLVYAELSSALPR-SGGIYVYLENAFGKFVA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  94 FNVAWGYWLMTIFSNVAFAIMVMDTLNYFLPGDFkGGNNIPSVIGASLLIWGFNFLVLSGTRIAGSINIVGTLAKLIPLV 173
Cdd:pfam13520  78 FLAGWSNWFAYVLGLASSASVAASYLLSALGPDL-VPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLLPL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 174 AFIIILMLFMKYTTFADNVWGHsaskASQDLGSIFSQVTSPLSVALWSFIGVEGAVALSGRAKNkRDVGKATFIGFVVSL 253
Cdd:pfam13520 157 ILIIILGLVTADGGGFNLLSGE----WHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKK-RNVPKAIFIGVIIVG 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 254 IICLLVSILPFGVLTQHELSAI-PTPSTAGIL-KIVVGEWGKIMIILGVLISVLTSWLAWTIICAELPMVAAQNGTFPKP 331
Cdd:pfam13520 232 VLYILVNIAFFGVVPDDEIALSsGLGQVAALLfQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPFS 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 332 --FSKKNVKGSASVSLYISSAFMQIVVLLVYFSNDAWLAMLAISTLTVLPAYLMTTAYLFKLcisgeYASYTTNHSRSAA 409
Cdd:pfam13520 312 rfFAKVNKFGSPIRAIILTAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLIL-----RKKRPDLGRIPGR 386
                         410
                  ....*....|....*..
gi 1433911394 410 LVSSIIGFVFCLFMFYA 426
Cdd:pfam13520 387 WPVAIFGILFSLFLIVA 403
cadB PRK10435
cadaverine/lysine antiporter;
10-421 2.49e-23

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 102.14  E-value: 2.49e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  10 NKQKLGLLALTSIVVSSMIGSGVDGLPQNMAensAVGPVAI-AWIVCGIGMFFISRTFIVLSNIRPDlQSGVYMYAREGF 88
Cdd:PRK10435    3 SAKKIGLFACTGVVAGNMMGSGIALLPANLA---SIGSIAIwGWIISIIGAMSLAYVYARLATKNPQ-QGGPIAYAGEIS 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  89 GRFtAFNVAWGYWLMTIFSNVAFAIMVMDTLNYFLPgdfKGGNNIPSVIGASLLIWGFNFLVLSGTRIAGSINIVGTLAK 168
Cdd:PRK10435   79 PAF-GFQTGVLYYHANWIGNLAIGITAVSYLSTFFP---VLNDPIPAGIACIAIVWVFTFVNMLGGTWVSRLTTIGLVLV 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 169 LIPLVAFIIILMLFMKYTTFADNvWGHSAskasqdlGSIFSQVTSPLSVALWSFIGVEGAVALSGRAKN-KRDVGKATFI 247
Cdd:PRK10435  155 LIPVVGTAIVGWHWFDAATYAAN-WNTSD-------TTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNpKRTVPLATML 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 248 GFVVSLIICLLVSILPFGVLTQHELSAIPTPSTAGILKIvVGEWGKIMIILGVLISVLTSWLAWTIICAELPMVAAQNGT 327
Cdd:PRK10435  227 GTGLAGIIYIAATQVISGMFPASVMAASGAPFAISASTI-LGNWAAPLVSAFTAFACLTSLGSWMMLVGQAGVRAANDGN 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 328 FPKPFSKKNVKGSASVSLYISSAFMQIV-VLLVYFSNDAWLAMLAISTLTVLpAYLMTTAYLFKLCISG-EYASYTTNHS 405
Cdd:PRK10435  306 FPKVYGEVDKNGIPKKGLLLAAVKMTALmILITLMNSSGGKASDLFGELTGI-AVLLTMLPYFYSCVDLiRFEGVNIRNF 384
                         410
                  ....*....|....*.
gi 1433911394 406 RSaaLVSSIIGFVFCL 421
Cdd:PRK10435  385 VS--LICSVLGCVFCF 398
potE PRK10655
putrescine transporter; Provisional
11-426 3.14e-20

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 92.79  E-value: 3.14e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  11 KQKLGLLALTSIVVSSMIGSGVDGLPQNMAE----------NSAVGPVAIAWIVCGIGMFfiSRTfivlsnirpdlQSGV 80
Cdd:PRK10655    5 SNKMGVVQLTILTAVNMMGSGIIMLPTKLAQvgtisilswlVTAVGSMALAYAFAKCGMF--SRK-----------SGGM 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  81 YMYAREGFGRFTAFNVAWGYWLMTIFSNVAFAIMVMDTLNYFLPGDFkggNNIPSVIGASLLIWGFNFLVLSGTRIAGSI 160
Cdd:PRK10655   72 GGYAEYAFGKSGNFMANYTYGVSLLIANVAIAISAVGYGTELFGATL---SPVQICLATIGVLWLCTVANFGGARITGQI 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 161 NIVGTLAKLIPLVAFIIILMLFMKYTTFADNVWGHSAskasqdlgSIFSQVTSPLSVALWSFIGVEGAVALSGRAKN-KR 239
Cdd:PRK10655  149 SSVTVWGVIIPVVGLSIIGWFWFSPSLYVAAWNPHHL--------PFFSAVGSSIAMTLWAFLGLESACANSDAVENpER 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 240 DVGKATFIGFVVSLIICLLVSILPFGVLTQHELSAIPTPSTAGILKIVVGEWGKIMIILGVlISVLTSWLAWTIICAELP 319
Cdd:PRK10655  221 NVPIAVLGGTLGAAVIYIVSTNVIAGIVPNMELANSTAPFGLAFAQMFNPTVGKIVMALMV-MSCCGSLLGWQFTIAQVF 299
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 320 MVAAQNGTFPKPFSKKNVKGsASVSLYISSAFMQIVVLLVYFS---NDAWLAMLAISTLTVLPAYLMTTAYLFKLcisge 396
Cdd:PRK10655  300 KSSADEGYFPKIFSRVTKVD-APVQGMLIIVVIQSLLSLMTISpslNSQFNVLVNLAVVTNIIPYILSMAALVII----- 373
                         410       420       430
                  ....*....|....*....|....*....|
gi 1433911394 397 yaSYTTNHSRSAALVSSIIGFVFCLFMFYA 426
Cdd:PRK10655  374 --QKVANVPPSKAKVANFIAFVGALYSFYA 401
AA_permease pfam00324
Amino acid permease;
50-384 1.08e-12

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 70.04  E-value: 1.08e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  50 IAWIVCGIGMFFISRTFIVLSNIRPdLQSGVYMYAREGFGRFTAFNVAWGYWLMTIFSNVAFAIMVMDTLNYFLPGDfkg 129
Cdd:pfam00324  33 LGYLISGVVIFLVMLSLGEISTNGP-VSGGFYTYASRFLGPSLGFATGWNYWLSWITVLALELTAASILIQFWELVP--- 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 130 gnNIPSVIGASLLIWG-FNFLVLSGTRIAGSINIVGTLAKLIPLVAFIIILMLFM--KYTTFADNVWGHSASKASQDLGS 206
Cdd:pfam00324 109 --DIPYLWVWGAVFLVlLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIILLsgGNPNDGAIFRYLGDNGGKNNFPP 186
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 207 IF-SQVTSPLSVALWSFIGVEGAVALSGRAKN-KRDVGKAT-----FIGFVVSLIICLLVSILPFGVLTQHELSAIPTPS 279
Cdd:pfam00324 187 GFgKGFISVFVIAFFAFTGIELVGIAAGEVKNpEKSIPKAIlqviwRITIFYILSLLAIGLLVPWNDPGLLNDSASAASP 266
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 280 TAGILKIVVGEWGKIMIILGVLISVLTSWLAWTIICAELPMVAAQNGTFPKPFSKKNVKGSASVSLYISSAFMQIVVLLV 359
Cdd:pfam00324 267 FVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFLKKVDKRGVPLRAILVSMVISLLALLLA 346
                         330       340
                  ....*....|....*....|....*.
gi 1433911394 360 YFS-NDAWLAMLAISTLTVLPAYLMT 384
Cdd:pfam00324 347 SLNpAIVFNFLLAISGLSGLIVWGLI 372
frlA PRK11357
amino acid permease;
11-376 1.87e-11

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 66.03  E-value: 1.87e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  11 KQKLGLLALTSIVVSSMIGSGVDGLPQNMAENSAVGPVAIAWIVCGiGMFFISRTFIV--LSNIRPDlQSGVYMYAREGF 88
Cdd:PRK11357    7 QRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIG-GLIVIPQMCVYaeLSTAYPE-NGADYVYLKNAG 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  89 GRFTAFNVAWGYWLMTifSNVAFAIMVMDTLNYFlpGDFKGGNNIPSVIGASLLIWGFNFLVLSGTRIAGSINIVGTLAK 168
Cdd:PRK11357   85 SRPLAFLSGWASFWAN--DAPSLSIMALAIVSNL--GFLTPIDPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAK 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 169 LIPLVAFIIILMLFMKYTTFAdnvwghSASKASQDLGSIFSQVTSPLSVALWSFIGVEGAVALSGRAKN-KRDVGKATFI 247
Cdd:PRK11357  161 IIPFTIVIGLGIFWFKAENFA------APTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNpGKTMPRALIG 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 248 GFVVSLIICLLVSILPFGVLTQHELSAIPTPSTAGILKI-VVGEWGKIMIILGVLISVLTSWLAWTIICAELPMVAAQNG 326
Cdd:PRK11357  235 SCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIpALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDN 314
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1433911394 327 TFPKPFSKKNVK-GSASVSLYISSAFMQIVV-------LLVYFSndawLAMLAISTLT 376
Cdd:PRK11357  315 LFFKCFGHVHPKyNTPDVSIILQGALGIFFIfvsdltsLLGYFT----LVMCFKNTLT 368
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
43-383 6.38e-10

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 61.29  E-value: 6.38e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  43 SAVGP-VAIAWIVCGIGMFFISRTFIVLSNIRPDLQSGVYmYAREGFGRFTAFNVAWGYWLMTIFSNVAFAIMVMDTLNY 121
Cdd:COG1113    44 ALAGPaVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSD-YAREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQF 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 122 FLPGdfkggnnIPSVIGASLLIWGFNFLVLSGTRIAGSINIVGTLAKLIPLVAFII--ILMLFMKYTTFA------DNVW 193
Cdd:COG1113   123 WFPD-------VPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIVAFIVvgLLLIFFGFGLPGgppaglSNLW 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 194 GHsaskasqdlGSIF----SQVTSPLSVALWSFIGVEGAVALSGRAKN-KRDVGKAT-------FIGFVVSLIIclLVSI 261
Cdd:COG1113   196 DH---------GGFFpngiGGVLAALQIVVFAFGGIELVGIAAAEAKDpEKTIPKAInsviwriLLFYVGSLFV--ILAL 264
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 262 LPFGVLTQHE------LSAIPTPSTAGILKIVvgewgkimiilgVLISVLTSWLAWTIICAELPMVAAQNGTFPKPFSKK 335
Cdd:COG1113   265 VPWNQIGAGGspfvtvFSLLGIPAAAGIMNFV------------VLTAALSSLNSGLYSTSRMLYSLAERGDAPKFFGKL 332
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 1433911394 336 NVKGSASVSLYISSAFMQIVVLLVYFS-NDAWLAMLAISTLTVLPAYLM 383
Cdd:COG1113   333 SKRGVPVRAILLSAVVLLIGVVLNYLLpEKAFTFLLSISGFGALFVWLM 381
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
11-367 1.85e-08

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 56.68  E-value: 1.85e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  11 KQKLGLLALTSIVVSSMIGSGVDGLPQNMAENS-AVGPVAIAWIVCGIGMFFISRTFIVLSNIRPDlQSGVYMYAREGFG 89
Cdd:TIGR00911  41 KKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAgSVGLALIMWAVCGIFSIVGALVYAELGTTIPK-SGGEYNYILEVFG 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  90 RFTAFNVAWgYWLMTIFSNVAfAIMVMDTLNYFLPGDF------KGGNNIPSVIGASLLIWGFNFLVLSGTRIAgsinIV 163
Cdd:TIGR00911 120 PLLAFLRLW-IELLVIRPGSQ-AVNALNFAIYILTPVFpdcevpEWAIRLVAVLCVLLLTLVNCLSVKWATRVQ----DI 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 164 GTLAKLIPLvAFIIILMLfmkYTTFADNVWGHSASKASQDLGSIFSQVTSPLSVALWSFIGVEGAVALSGRAKNK-RDVG 242
Cdd:TIGR00911 194 FTACKLLAL-LLIIITGW---VQLGKGGVESLNPKNAFEGTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPyRTLP 269
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 243 KATFIGFVVSLIICLLVSILPFGVLTQHELSAiPTPSTAGILKIVVGEWGKIMIILgVLISVLTSWLAWTIICAELPMVA 322
Cdd:TIGR00911 270 IAIIISMPIVTFIYVLTNIAYFTVLSPEELLA-SLAVAVDFGERLLGVMSWAMPAL-VGLSCFGSVNGSLFSSSRLFFVG 347
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1433911394 323 AQNGTFPKPFSKKNVKGSASVSLYIssaFMQIVVLLVYFSNDAWL 367
Cdd:TIGR00911 348 GREGHLPSLLSMIHVKRLTPLPSLL---IVCTLTLLMLFSGDIYS 389
PRK10238 PRK10238
aromatic amino acid transporter AroP;
83-378 1.20e-06

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 50.72  E-value: 1.20e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  83 YAREGFGRFTAFNVAWGYWLMTIFSNVAFAIMVMDTLNYFLPgdfkggnNIPSVIGASLLIWGFNFLVLSGTRIAGSINI 162
Cdd:PRK10238   81 FAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYP-------EIPTWVSAAVFFVVINAINLTNVKVFGEMEF 153
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 163 VGTLAKLIPLVAFIiilmLFMKYTTFADNVWGHSASKASQDLGSI----FSQVTSPLSVALWSFIGVEGAVALSGRAKN- 237
Cdd:PRK10238  154 WFAIIKVIAVVAMI----IFGGWLLFSGNGGPQATVSNLWDQGGFlphgFTGLVMMMAIIMFSFGGLELVGITAAEADNp 229
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 238 KRDVGKAT-------FIGFVVSLIIclLVSILPFGVLTqhelsAIPTPstagiLKIVVGEWGKIMIILGVLISVLTSWLA 310
Cdd:PRK10238  230 EQSIPKATnqviyriLIFYIGSLAV--LLSLMPWTRVT-----ADTSP-----FVLIFHELGDTFVANALNIVVLTAALS 297
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1433911394 311 WTIIC----AELPMVAAQNGTFPKPFSKKNVKGSASVSLYISSAFMQIVVLLVYFSNDAWLAMLAISTLTVL 378
Cdd:PRK10238  298 VYNSCvycnSRMLFGLAQQGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSAL 369
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
11-375 2.95e-05

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 46.35  E-value: 2.95e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  11 KQKLGLLALTSIVVSSMIGSGVDGLPQNMAENSAVGPVAIAWIVCGIGMFFISRTFIVLSnIRPDLQSGVYMYAREGFGR 90
Cdd:TIGR00906  27 KRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDSGPAIVLSFLISGLAAVLSGFCYAEFG-ARVPKAGSAYLYSYVTVGE 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  91 FTAFNVAWGYWLMTIFSNVAFA---IMVMDTLNYFLPGDFK---------GGNNIPSVIgASLLIWGFNFLVLSGTRIAG 158
Cdd:TIGR00906 106 LWAFITGWNLILEYVIGTAAVArswSAYFDELLNKQIGQFRrtyfklnydGLAEYPDFF-AVCLILLLAVLLSFGVKESA 184
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 159 SINIVGTLAKLIPLvAFIIILMLfmkytTFAD-NVWGHSASKASQDLGSI-FSQVTSPLSVALWSFIGVEgavALSGRAK 236
Cdd:TIGR00906 185 WVNKIFTAINILVL-LFVIIAGF-----TKADvANWSITEEKGAGGFMPYgFTGVLSGAATCFFAFIGFD---AIATTGE 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 237 NKRDVGKATFIGFVVSLIICLLVSILPFGVLT--QHELSAIPTPSTAGILKIVVGEWGKIMIILGVLISVLTSWLAWTII 314
Cdd:TIGR00906 256 EVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTlmMPYYLLDPDAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFP 335
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1433911394 315 CAELPMVAAQNGTFPKPFSKKNVKGSASVSLYISSAFMQIVVLLVyFSNDAWLAMLAISTL 375
Cdd:TIGR00906 336 LPRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFL-FDLKALVDLLSIGTL 395
PRK11021 PRK11021
putative transporter; Provisional
149-451 2.41e-04

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 43.36  E-value: 2.41e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 149 LVLSGTRIAGSiniVGTLAKLIPLVAFIIILMLFMKyttfADNVWGHSASKASQDLGsiFSQVTSPLSVALWSFIGVEGA 228
Cdd:PRK11021  126 LWLLNLRGASS---SANLQTVIALLIVALVVAIWWA----GDIKPADIPFPAPGSIE--WSGLFAALGVMFWCFVGIEAF 196
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 229 VALSGRAKN-KRDVGKATFIGFVVSLII---CLLVsILPFGVLTQHELSAiptPSTAGILKIVVGEWGKIMI-ILGVLiS 303
Cdd:PRK11021  197 AHLASEFKNpERDFPRALMIGLLLAGLVywaCTVV-VLHFPAYGDKQAAA---ASLPGIFVQLFGGYALWVIcVIGYL-A 271
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 304 VLTSWLAWTIICAELPMVAAQNGTFPKPFSKKNVKGSASVSLYISSAFMQIVVLLVYFSNDAWLAMLAISTLTVLPAYLM 383
Cdd:PRK11021  272 CFASVNIYTQSFARLVWSQAREGRPPSYLARLSARGVPVNALNAVLGCCAVSILLIYALGLNLEALIAYANGIFVLIYLL 351
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1433911394 384 TTAYLFKLCisgeyasyttnHSRSAALVssIIGFVFCLFMFYASEIKYLAMVPVLLTLGvpLFIWARK 451
Cdd:PRK11021  352 CMLAACKLL-----------KGRYRPLA--VLGCLLCLLLLVMLGWKMLYALIMLALLW--LFLPKRK 404
Spore_permease pfam03845
Spore germination protein;
19-286 1.86e-03

Spore germination protein;


Pssm-ID: 281794  Cd Length: 321  Bit Score: 40.31  E-value: 1.86e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  19 LTSIVVSSMIGSGVDGLPQNMAEnSAVGPVAIAWIVCGIGMFFISRTFIVLSNIRPDlqSGVYMYAREGFGRFTA--FNV 96
Cdd:pfam03845   7 TFFLIVSFQLGSGILTLPRSVAE-QAGPDGWISVLLAGIIGLILVYLYYYLLKKFPE--KTLIEYMKKILGKWLGslLSI 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394  97 AW-GYWLMTIFSNVAFAIMVMDTlnYFLPgdfkggnNIPSVIGASLLIWGFNFLVLSGtriagsINIVGTLAKLIPLVAF 175
Cdd:pfam03845  84 LFmLYFLYIAGRVLRIFSEVIQF--FLLP-------DTPTWIIILTLLLVSLYLISKG------IEVLAREFCFIIPILL 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1433911394 176 IIILMLFMKYTTFAD-----NVWGHSaskasqdlgsiFSQVTSPLSVALWSFIGVEGAVALSGRAKNKRDVGKATFIGFV 250
Cdd:pfam03845 149 IILLLILLFSLKIAHidnlrPVLGNG-----------ISPVLKGLKVTSLPFGGFEILLMLYPFMKDKKKSKKAALLGVG 217
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1433911394 251 VSLIICLLVSILPFGVLTQHEL--SAIPTPSTAGILKI 286
Cdd:pfam03845 218 ISGLLYTLTTIIVIGVLGVEQTktTTWPTLSLLRVIEV 255
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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