|
Name |
Accession |
Description |
Interval |
E-value |
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
107-774 |
0e+00 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 655.08 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 107 APAPKEDALTVVGDwlgDARENDVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGshdLAMNFGIRGLN 186
Cdd:COG4772 18 EAATTLETVVVTGS---RAAEARLKDVPGSVSVVDREELENQAATSLREVLRRVPGVNVQEEDGFG---LRPNIGIRGLG 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 187 PRLASRSTVLMDGIPVPFAPYGQPQLSLAPvSLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGVEGQl 266
Cdd:COG4772 92 PRRSRGITLLEDGIPIAPAPYGDPAAYYFP-DLERMERIEVLRGAAALRYGPQTVGGAINFVTRTIPTAFGGELRVTGG- 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 267 sptssqNNPKETHNLMVGGTADNgFGTALLYSGTRGSDWREHSATRIDDLMLKSKYAPNKVHTFNSLLQYYDGEADMPGG 346
Cdd:COG4772 170 ------SFGYRRTHASVGGTVGN-FGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKFQYYDEDANTPGG 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 347 LSRADYDADRWQSTRPYDRFWGRRKLASLGYQFQPDSQHKFNILGFYTQTLRSGYLEQ--------GKRITLSPRNYWVR 418
Cdd:COG4772 243 LTDAQFDADPRQSYRPADQFDTRRTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWYIRQntadpntpGLGLRGNPRGYRSY 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 419 GIEPRYSQSFMIGPYAHEVGVGYRYVNESTHEMRYytATSSGQLPSGsSPYDRDTRSGTEAHAWYLDDKIDI-GNWTITP 497
Cdd:COG4772 323 GIEPRLTHRFELGGVPHTLEVGLRYHREEEDRKQY--VNTYGQGRSG-AGLRRDRRFSADALAAYAQNRFELtGRLTLTP 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 498 GMRFEHIESYQNNAIK-----GTHEEVSYNAPLPALNVLYHLTDSWNLYANTEGSFGTVQYSQIGKAV-QSGNVEPEKAR 571
Cdd:COG4772 400 GLRYEHIRRDRTDRYStrtggDDSGSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEPPTFGDLAYGNgGNPDLKPEKSW 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 572 TWELGTRYD-DGALTAEMGLFLINFNNQYDSNQT----NDTVTARGKTRHTGLETQARYDLGtlTPTLDNVSVYASYAYV 646
Cdd:COG4772 480 NYELGTRGRiGNGLSAEVALFYIDYDNELGSCSAaggdRSTFTNAGETRHQGLELALDYDLL--KGGGLGLPLFAAYTYT 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 647 NAEIREKGD--TYGNQVPFSPKHKGTLGVDYKPGNWTFNLNSDFQSSQFADNANTVkesADGSTGRIPGFMLWGARVAYD 724
Cdd:COG4772 558 DAEFTSDFGpvFAGNRLPYVPRHQLTAGLGYEHGGWTANLNGRYVSEQFTDAANTV---ADGSFGKIPSYTVLDLSASYD 634
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 1465504975 725 FGPqmaDLNLAFGVKNIFDQDYFIRSYDDNNKGIYAGQPRTLYMQGSLKF 774
Cdd:COG4772 635 FGK---NLSLFAGVNNLFDKRYIASRAPNYAAGIRPGPPRTVYAGLRLKF 681
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
132-774 |
0e+00 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 533.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 132 EHAGARDVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGSHDlamNFGIRGLNPRlASRSTVLMDGIPVPFAPygqpq 211
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFG---NITIRGFGLE-VDIDNVYLDGVPLLSRG----- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 212 lSLAPVSLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFgieAGVEGQLSPTSSQNNPKETHNLMVGgtADNGF 291
Cdd:TIGR01783 72 -NLAIVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEP---KGSVTFGAGTRSGYRTAFDLGGPLG--ADGTF 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 292 GTALLYSGTRGSDWREHSATRIDDLMLKSKYAPNkVHTFNSLLQYYDGEADMP--------GGLSRADYDADRWQST--- 360
Cdd:TIGR01783 146 RGRLNGARQDGDSFYDGAGEETRLGATATDWQLD-DRTLLRLGAYYQKERDRGgygglpasGGTSGRDLSSDRYLGTssn 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 361 RPYDRFWGRRKLASLGYQFQPDSQHKFNILGFYTQTLR-----SGYLEQGKRITLSPRNYWVR----GIEPRYSQSFMIG 431
Cdd:TIGR01783 225 RNYDDREYLSYGLSLEYQFNDVWTGKQNLRYSYFDTDSnqvqaSGYSSDGGLFGRSLTVVNVKqdrvQIDAGLDGEFETG 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 432 PYAHEVGVGYRY----------VNESTHEMRYYTATSSGQLPSGSSPYDRDTRSGTEAH-AWYLDDKIDIGNWTITPGMR 500
Cdd:TIGR01783 305 PIEHDLLLGVSYgqrttnrfnnTGYPSDNIYSLTATSSARTDIGDSPKDRALSSTTKALnGVALQRILLADKWTLTLGGR 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 501 FEHIESYQNNAIKGTHEEVSYNAPLPALNVLYHLTDSWNLYANTEGSFGTVQYSQIGKAVQSGNVEPEKARTWELGTRYD 580
Cdd:TIGR01783 385 YDSVDVKSNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGDILEPEKGKNYELGVRYD 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 581 DGA-LTAEMGLFLINFNNQYDSNQTNDTVTAR-GKTRHTGLETQARYDLgtltptLDNVSVYASYAYVNAEIREK--GDT 656
Cdd:TIGR01783 465 LGDsLLATAALFRITKDNQLVQDPVNGTFSVNaGKTRNRGVELEARGYL------TPGLSLSAGYTYTDAEFTEDtnGDT 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 657 YGNQVPFSPKHKGTLGVDYKPGNWTFNLnSDFQSSQFADNANtvkeSADGSTGRIPGFMLWGARVAYDFGPqMADLNLAF 736
Cdd:TIGR01783 539 QGNTVPFVPKHTASLWASYAPPVGDNGL-TLGGGVQYTGKAY----VDGGNTGKVPSYTVVDLSVRYDLTK-KKNLTLAL 612
|
650 660 670
....*....|....*....|....*....|....*....
gi 1465504975 737 GVKNIFDQDYFIRSYD-DNNKGIYAGQPRTLYMQGSLKF 774
Cdd:TIGR01783 613 NVNNLFDRDYYTSGYRwGPSAYIYPGAPRTVGLSVSYDF 651
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
138-774 |
7.22e-99 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 319.40 E-value: 7.22e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 138 DVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGshdlAMNFGIRGLNPrlaSRSTVLMDGIPVPFAPYGQpQLSLAPV 217
Cdd:cd01347 3 SVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGG----GSTISIRGFGP---DRTLVLVDGLPLASSNYGR-GVDLNTI 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 218 SLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGVEGQLSPTSSQNNpketHNLMVGGT-ADNGFGTALL 296
Cdd:cd01347 75 PPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGG----GGFDVSGAlADDGAFGARL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 297 YSGTRGSDW-------REHSATRIDDLMLKSKYAPNKVHTFNSLLQYYDGEADMPGGLSRADYDA--------DRWQSTR 361
Cdd:cd01347 151 YGAYRDGDGtidgdgqADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGsslgggpsSNTNGDR 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 362 PYDRFWGRRKLASLGYQFQP-DSQHKFNILGFYTQTLRSGYLEQGK------------RITLSPRNYWVRGIEPRYSQSF 428
Cdd:cd01347 231 DWDYRDRYRKRASLGLEHDLnDTGWTLRANLSYSYTDNDGDPLILNggnnaaggdlgrSGYSSERDTTQLGFDAGLNAPF 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 429 MIGPYAHEVGVGYRYVNESTHEMRYytatssgqlpsgsspydrdtrsgteahAWYLDDKIDIG-NWTITPGMRFEHIESY 507
Cdd:cd01347 311 GTGPVAHTLTLGVEYRREELDEKQT---------------------------ALYAQDTIELTdDLTLTLGLRYDHYDQD 363
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 508 QNNAIKG-THEEVSYNAPLPALNVLYHLTDSWNLYANTEGSFGTVQYSQI--------GKAVQSGNVEPEKARTWELGTR 578
Cdd:cd01347 364 SKDTIAGgTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELygggshggTAAVGNPNLKPEKSKQYELGLK 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 579 YD-DGALTAEMGLFLINFNNQYDSNQTNDTV------TARGKTRHTGLETQARYDLGtltptlDNVSVYASYAYVNAEIR 651
Cdd:cd01347 444 YDpGDGLTLSAALFRIDIKNEIVSTPTNTGLglvtvyVNGGKARIRGVELEASYDLT------DGLGLTGSYTYTDTEVK 517
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 652 E-KGDTYGNQVPFSPKHKGTLGVDYKPGN--WTFNLNSDFQSSQFADNANTVkesadgSTGRIPGFMLWGARVAYDFGPq 728
Cdd:cd01347 518 RtDGATTGNRLPGIPKHTANLGLDYELPDegLTAGGGVRYRGKQYADTANGN------NTVKVPGYTLVDLSASYQFTK- 590
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 1465504975 729 maDLNLAFGVKNIFDQDYFIRSYDD-NNKGIYAGQPRTLYMQGSLKF 774
Cdd:cd01347 591 --NLTLRLGVNNLFDKDYYTSLSVRgSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
328-773 |
2.52e-41 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 158.01 E-value: 2.52e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 328 HTFNSLLQYYDGEADMPGGLSRADYDADRWQSTRPyDRFWGRRKLASLGYQFQPDSQHKFNILGFYTQTLRSGYLEQGKR 407
Cdd:pfam00593 13 TLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDR-PLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLRYSSLD 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 408 ITLSPRNYWVRGIEPRYSQSFMIGPYAHEVGVGYRY---------VNESTHEMRYYTATSSGQLPSGSSPYDRDTRSGTE 478
Cdd:pfam00593 92 GDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLdlshdlllgVELRTAGLDYRRLDDDAYDPYDPANPSSSSYSDTT 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 479 AHAW--YLDDKIDI-GNWTITPGMRFEHIE-SYQNNAIKGTHEEVSYNAPLPALNVLYHLTDSWNLYANTEGSFGTVQYS 554
Cdd:pfam00593 172 TDSYglYLQDNIKLtDRLTLTLGLRYDHYStDGDDGNGGGDNFSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLG 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 555 QI--------GKAVQSGNV--EPEKARTWELGTRYDDGALTAEMGLFLINFNNQYDSNQTNDTVTAR-------GKTRHT 617
Cdd:pfam00593 252 ELygsgsgggGGAVAGGNPdlKPETSDNYELGLKYDDGRLSLSLALFYIDIKNLITSDPDGPGLGGTvytytnvGKARIR 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 618 GLETQARYDLgtltptLDNVSVYASYAYVNAEIREKGDTYGNQVPFSPKHKGTLGVDYKP--GNWTFNLNSDFQSSQFAD 695
Cdd:pfam00593 332 GVELELSGRL------WGLGLSGGGYTYTDADDDADADDTGNPLPNVPRHTANLGLTYDFplGGWGARLGARYVGSGERR 405
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1465504975 696 NANtvkesaDGSTGRIPGFMLWGARVAYDFGPqmaDLNLAFGVKNIFDQDYF-IRSYDDNNKGIYAGQPRTLYMQGSLK 773
Cdd:pfam00593 406 YGD------AANTFKTPGYTLVDLSAGYRLNK---NLTLRLGVNNLFDKYYKrYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
109-761 |
9.36e-20 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 94.32 E-value: 9.36e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 109 APKEDALTVVGDwlgdARENDVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSAPENNG-TGshdlAMNFGIRGLNp 187
Cdd:PRK13486 22 AAAEDVMIVSAS----GYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDVESGTGkTG----GLEISIRGMP- 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 188 rlASRSTVLMDGI------PVPFAPYGQPQLSLAPvSLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDF--GIE 259
Cdd:PRK13486 93 --ASYTLILIDGVrqggssDVTPNGFSAMNTGFMP-PLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKWlsSVN 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 260 AGVEGQLSP---TSSQNNPKETHNLMVGGTADNGFGTALLYSGTRGSDWREHSATRIDdlmlkskyAPNKVHTFN--SLL 334
Cdd:PRK13486 170 AGLNLQESNkwgNSSQFNFWSSGPLVDDSVSLQVRGSTQQRQGSSVTSLSDTAATRIP--------YPTESQNYNlgARL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 335 QYYDGEAD---MPGGLSRADYDADRWQ---STRPYDRF--WGRRKLaSLGYqfqpdsQHKFNiLGFYTQTLRSGYLE--- 403
Cdd:PRK13486 242 DWKASEQDvlwFDMDTTRQRYDNRDGQlgsLTGGYDRTlrYERNKI-SAGY------DHTFT-FGTWKSYLNWNETEnkg 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 404 -QGKRITLSPRNYWVRGiEPRYSQ-------SFMIGPY--AHEVGVGYRYVNESTHEmryytatsSGQLPSGSSPYDRDT 473
Cdd:PRK13486 314 rELVRSVLKRDKWGLAG-QPRELKesnlilnSLLLTPLgeSHLVTVGGEFQSSSMKD--------GVVLASTGETFRQKS 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 474 RSGTEAHAWYLDDKIdignwTITPGMRFEHIESYqnnaikGTHEEvsynaplPALNVLYHLTDSWNLYANTEGSFGTVQY 553
Cdd:PRK13486 385 WSVFAEDEWHLTDAL-----ALTAGSRYEHHEQF------GGHFS-------PRAYLVWDVADAWTLKGGVTTGYKAPRM 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 554 SQIGKAVQS----------GN--VEPEKARTWELGTRYDDGA-LTAEMGLFLINFNNQ---YDSNQTNDTVTARGKTRHT 617
Cdd:PRK13486 447 GQLHKGISGvsgqgktnllGNpdLKPEESVSYEAGVYYDNPAgLNANVTGFMTDFSNKivsYSINDNTNSYVNSGKARLH 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 618 GLETQarydlGTLTPTLDNVSVYASYAYVNAEIREkGDTYGNQVPFSPKHKGTLGVdykpgNW--TFNLNSDF------Q 689
Cdd:PRK13486 527 GVEFA-----GTLPLWSEDVTLSLNYTWTRSEQRD-GDNKGAPLSYTPEHMVNAKL-----NWqiTEEVASWLgaryrgK 595
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1465504975 690 SSQFADNANTV----KESADGSTGRIPGFMLWGARVAYDFgpqMADLNLAFGVKNIFDQDYF-IRSYDDNNKGIYAG 761
Cdd:PRK13486 596 TPRFTQNYSSLsavqKKVYDEKGEYLKAWTVVDAGLSWKM---TDALTLNAAVNNLLNKDYSdVSLYSAGKSTLYAG 669
|
|
| STN |
smart00965 |
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ... |
56-107 |
3.06e-12 |
|
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.
Pssm-ID: 198033 [Multi-domain] Cd Length: 52 Bit Score: 61.75 E-value: 3.06e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 1465504975 56 ITLSVDASLTRGKQSNGLHGDYDVESGLQQLLDGSGLQVKPLGNNSWTLEPA 107
Cdd:smart00965 1 LNFVYDPALVAGRRVSLLLGNVTVEQALDRLLAGTGLTYRRIGGNTIVLSPA 52
|
|
| STN |
pfam07660 |
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ... |
57-107 |
1.73e-05 |
|
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.
Pssm-ID: 429580 [Multi-domain] Cd Length: 51 Bit Score: 42.50 E-value: 1.73e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 1465504975 57 TLSVDASLTRGKQSNGLH-GDYDVESGLQQLLDGSGLQVKpLGNNSWTLEPA 107
Cdd:pfam07660 1 SILYDSDLVDGKQSVSLNvGNVTLEEALDQLLAGTGLSYE-IGGNTIVLRPK 51
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
107-774 |
0e+00 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 655.08 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 107 APAPKEDALTVVGDwlgDARENDVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGshdLAMNFGIRGLN 186
Cdd:COG4772 18 EAATTLETVVVTGS---RAAEARLKDVPGSVSVVDREELENQAATSLREVLRRVPGVNVQEEDGFG---LRPNIGIRGLG 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 187 PRLASRSTVLMDGIPVPFAPYGQPQLSLAPvSLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGVEGQl 266
Cdd:COG4772 92 PRRSRGITLLEDGIPIAPAPYGDPAAYYFP-DLERMERIEVLRGAAALRYGPQTVGGAINFVTRTIPTAFGGELRVTGG- 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 267 sptssqNNPKETHNLMVGGTADNgFGTALLYSGTRGSDWREHSATRIDDLMLKSKYAPNKVHTFNSLLQYYDGEADMPGG 346
Cdd:COG4772 170 ------SFGYRRTHASVGGTVGN-FGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKFQYYDEDANTPGG 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 347 LSRADYDADRWQSTRPYDRFWGRRKLASLGYQFQPDSQHKFNILGFYTQTLRSGYLEQ--------GKRITLSPRNYWVR 418
Cdd:COG4772 243 LTDAQFDADPRQSYRPADQFDTRRTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWYIRQntadpntpGLGLRGNPRGYRSY 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 419 GIEPRYSQSFMIGPYAHEVGVGYRYVNESTHEMRYytATSSGQLPSGsSPYDRDTRSGTEAHAWYLDDKIDI-GNWTITP 497
Cdd:COG4772 323 GIEPRLTHRFELGGVPHTLEVGLRYHREEEDRKQY--VNTYGQGRSG-AGLRRDRRFSADALAAYAQNRFELtGRLTLTP 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 498 GMRFEHIESYQNNAIK-----GTHEEVSYNAPLPALNVLYHLTDSWNLYANTEGSFGTVQYSQIGKAV-QSGNVEPEKAR 571
Cdd:COG4772 400 GLRYEHIRRDRTDRYStrtggDDSGSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEPPTFGDLAYGNgGNPDLKPEKSW 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 572 TWELGTRYD-DGALTAEMGLFLINFNNQYDSNQT----NDTVTARGKTRHTGLETQARYDLGtlTPTLDNVSVYASYAYV 646
Cdd:COG4772 480 NYELGTRGRiGNGLSAEVALFYIDYDNELGSCSAaggdRSTFTNAGETRHQGLELALDYDLL--KGGGLGLPLFAAYTYT 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 647 NAEIREKGD--TYGNQVPFSPKHKGTLGVDYKPGNWTFNLNSDFQSSQFADNANTVkesADGSTGRIPGFMLWGARVAYD 724
Cdd:COG4772 558 DAEFTSDFGpvFAGNRLPYVPRHQLTAGLGYEHGGWTANLNGRYVSEQFTDAANTV---ADGSFGKIPSYTVLDLSASYD 634
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 1465504975 725 FGPqmaDLNLAFGVKNIFDQDYFIRSYDDNNKGIYAGQPRTLYMQGSLKF 774
Cdd:COG4772 635 FGK---NLSLFAGVNNLFDKRYIASRAPNYAAGIRPGPPRTVYAGLRLKF 681
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
132-774 |
0e+00 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 533.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 132 EHAGARDVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGSHDlamNFGIRGLNPRlASRSTVLMDGIPVPFAPygqpq 211
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFG---NITIRGFGLE-VDIDNVYLDGVPLLSRG----- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 212 lSLAPVSLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFgieAGVEGQLSPTSSQNNPKETHNLMVGgtADNGF 291
Cdd:TIGR01783 72 -NLAIVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEP---KGSVTFGAGTRSGYRTAFDLGGPLG--ADGTF 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 292 GTALLYSGTRGSDWREHSATRIDDLMLKSKYAPNkVHTFNSLLQYYDGEADMP--------GGLSRADYDADRWQST--- 360
Cdd:TIGR01783 146 RGRLNGARQDGDSFYDGAGEETRLGATATDWQLD-DRTLLRLGAYYQKERDRGgygglpasGGTSGRDLSSDRYLGTssn 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 361 RPYDRFWGRRKLASLGYQFQPDSQHKFNILGFYTQTLR-----SGYLEQGKRITLSPRNYWVR----GIEPRYSQSFMIG 431
Cdd:TIGR01783 225 RNYDDREYLSYGLSLEYQFNDVWTGKQNLRYSYFDTDSnqvqaSGYSSDGGLFGRSLTVVNVKqdrvQIDAGLDGEFETG 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 432 PYAHEVGVGYRY----------VNESTHEMRYYTATSSGQLPSGSSPYDRDTRSGTEAH-AWYLDDKIDIGNWTITPGMR 500
Cdd:TIGR01783 305 PIEHDLLLGVSYgqrttnrfnnTGYPSDNIYSLTATSSARTDIGDSPKDRALSSTTKALnGVALQRILLADKWTLTLGGR 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 501 FEHIESYQNNAIKGTHEEVSYNAPLPALNVLYHLTDSWNLYANTEGSFGTVQYSQIGKAVQSGNVEPEKARTWELGTRYD 580
Cdd:TIGR01783 385 YDSVDVKSNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGDILEPEKGKNYELGVRYD 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 581 DGA-LTAEMGLFLINFNNQYDSNQTNDTVTAR-GKTRHTGLETQARYDLgtltptLDNVSVYASYAYVNAEIREK--GDT 656
Cdd:TIGR01783 465 LGDsLLATAALFRITKDNQLVQDPVNGTFSVNaGKTRNRGVELEARGYL------TPGLSLSAGYTYTDAEFTEDtnGDT 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 657 YGNQVPFSPKHKGTLGVDYKPGNWTFNLnSDFQSSQFADNANtvkeSADGSTGRIPGFMLWGARVAYDFGPqMADLNLAF 736
Cdd:TIGR01783 539 QGNTVPFVPKHTASLWASYAPPVGDNGL-TLGGGVQYTGKAY----VDGGNTGKVPSYTVVDLSVRYDLTK-KKNLTLAL 612
|
650 660 670
....*....|....*....|....*....|....*....
gi 1465504975 737 GVKNIFDQDYFIRSYD-DNNKGIYAGQPRTLYMQGSLKF 774
Cdd:TIGR01783 613 NVNNLFDRDYYTSGYRwGPSAYIYPGAPRTVGLSVSYDF 651
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
138-774 |
7.22e-99 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 319.40 E-value: 7.22e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 138 DVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGshdlAMNFGIRGLNPrlaSRSTVLMDGIPVPFAPYGQpQLSLAPV 217
Cdd:cd01347 3 SVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGG----GSTISIRGFGP---DRTLVLVDGLPLASSNYGR-GVDLNTI 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 218 SLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGVEGQLSPTSSQNNpketHNLMVGGT-ADNGFGTALL 296
Cdd:cd01347 75 PPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGG----GGFDVSGAlADDGAFGARL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 297 YSGTRGSDW-------REHSATRIDDLMLKSKYAPNKVHTFNSLLQYYDGEADMPGGLSRADYDA--------DRWQSTR 361
Cdd:cd01347 151 YGAYRDGDGtidgdgqADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGsslgggpsSNTNGDR 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 362 PYDRFWGRRKLASLGYQFQP-DSQHKFNILGFYTQTLRSGYLEQGK------------RITLSPRNYWVRGIEPRYSQSF 428
Cdd:cd01347 231 DWDYRDRYRKRASLGLEHDLnDTGWTLRANLSYSYTDNDGDPLILNggnnaaggdlgrSGYSSERDTTQLGFDAGLNAPF 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 429 MIGPYAHEVGVGYRYVNESTHEMRYytatssgqlpsgsspydrdtrsgteahAWYLDDKIDIG-NWTITPGMRFEHIESY 507
Cdd:cd01347 311 GTGPVAHTLTLGVEYRREELDEKQT---------------------------ALYAQDTIELTdDLTLTLGLRYDHYDQD 363
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 508 QNNAIKG-THEEVSYNAPLPALNVLYHLTDSWNLYANTEGSFGTVQYSQI--------GKAVQSGNVEPEKARTWELGTR 578
Cdd:cd01347 364 SKDTIAGgTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELygggshggTAAVGNPNLKPEKSKQYELGLK 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 579 YD-DGALTAEMGLFLINFNNQYDSNQTNDTV------TARGKTRHTGLETQARYDLGtltptlDNVSVYASYAYVNAEIR 651
Cdd:cd01347 444 YDpGDGLTLSAALFRIDIKNEIVSTPTNTGLglvtvyVNGGKARIRGVELEASYDLT------DGLGLTGSYTYTDTEVK 517
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 652 E-KGDTYGNQVPFSPKHKGTLGVDYKPGN--WTFNLNSDFQSSQFADNANTVkesadgSTGRIPGFMLWGARVAYDFGPq 728
Cdd:cd01347 518 RtDGATTGNRLPGIPKHTANLGLDYELPDegLTAGGGVRYRGKQYADTANGN------NTVKVPGYTLVDLSASYQFTK- 590
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 1465504975 729 maDLNLAFGVKNIFDQDYFIRSYDD-NNKGIYAGQPRTLYMQGSLKF 774
Cdd:cd01347 591 --NLTLRLGVNNLFDKDYYTSLSVRgSGLYGYYGPGRTYYLSVSYKF 635
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
123-759 |
6.73e-86 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 285.18 E-value: 6.73e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 123 GDARENDVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGShdlamNFGIRGLNpRLASRSTVLMDGIPV 202
Cdd:COG1629 8 ATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAG-----QISIRGFG-GGGNRVLVLVDGVPL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 203 PFAPYGQPQLSLapVSLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGVEGqlsptSSQNNPKetHNLM 282
Cdd:COG1629 82 NDPSGGDGGLSY--IDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASY-----GSYGTYR--ASLS 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 283 VGGTADNgFGTALLYSGTRGSDWREHSATRIDDLMLKSKYAPNKVHTFNSLLQYYDGEADMPGGLSRADYDADRWQSTRP 362
Cdd:COG1629 153 LSGGNGK-LAYRLSASYRDSDGYRDNSDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDSPGYLTLAALRPRGAMDDGT 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 363 YDRFWG----RRKLASLGYQFQP-DSQHKFNILGFYTQTLR------SGYLEQGKRITLSPRNYWVRGIEPRYSQSFMIG 431
Cdd:COG1629 232 NPYSNDtddnTRDRYSLSLEYEHlGDGLKLSASAYYRYDDTdldsdfTPTPADGGTLEQTDFDNRTYGLELRLTYDLGFG 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 432 PyAHEVGVGYRYVNESTHEMRYYTATSSGQLPSGSSPYDRDTRsgTEAHAWYLDDKIDIG-NWTITPGMRFEHIESYQNN 510
Cdd:COG1629 312 G-KHTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTSGADDDGT--TTSLALYAQDTYKLTdKLTLTAGLRYDYVSYDVDD 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 511 AIKGT---HEEVSYNAPLPALNVLYHLTDSWNLYANTEGSFGTVQYSQIGKAVQSG------NVEPEKARTWELGTRYD- 580
Cdd:COG1629 389 TVTGTdsaSGSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYANGTDPysvgnpDLKPETSTNYELGLRYRl 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 581 -DGALTAEMGLFLINFNN----QYDSNQTNDTVTAR--GKTRHTGLETQARYDLGtltptlDNVSVYASYAYVNAEIREK 653
Cdd:COG1629 469 lDGRLSLSLALFYSDVDNeilsVPLPNDSGFSTYYTnaGKARSYGVELELSYQLT------PGLSLNASYSYTDAKFDDD 542
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 654 GDTY----GNQVPFSPKHKGTLGVDYK-PGNWTFNLNSDFQSSQFADNANTVKesadgstgRIPGFMLWGARVAYDFGPq 728
Cdd:COG1629 543 TDGSadldGNRLPGVPPLTANLGLTYEfPGGWSLGLGVRYVGDRYLDDANTQG--------APGGYTLVDLGAGYRFGD- 613
|
650 660 670
....*....|....*....|....*....|.
gi 1465504975 729 maDLNLAFGVKNIFDQDYFIRSYDDNNKGIY 759
Cdd:COG1629 614 --NLTLSLGVDNLFDKKYATSLSVRASNVRG 642
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
138-774 |
7.47e-70 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 241.71 E-value: 7.47e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 138 DVIRREDFAKTGATTMREVLNRIPGVSApENNGTGSHDlamNFGIRGLNprlaSRSTVLMDGIPVPfapygqpqlSLAPV 217
Cdd:COG4774 14 TVVTRELIEDQGATSLADALRNVPGVTF-GAGEGGNGD---SFSIRGFS----ASGDIYVDGLRDP---------GQYRR 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 218 SLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVT-RAIPQDFGiEAGVEGqlsptSSQNNpkethnlmVGGTAD-NG-FGTA 294
Cdd:COG4774 77 DTFNLERVEVLKGPASVLYGRGSPGGVINLVTkRPTDEPFT-EVTLTY-----GSDGQ--------RRATLDvNGpLGDD 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 295 LLY----SGTRGSDWREHSATRIDDLMLKSKYAPNKVHTFNSLLQYYDGEADMPGGL------SRADYDADRWQSTrPYD 364
Cdd:COG4774 143 LAYrlngMYRDSDSYRDGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQDDDRTPDYGVpavangRPVDVDRSTFYGQ-PDD 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 365 RFWGRRKLASLGYQFQPDSQHKFNiLGFYTQTLRSGYLEQGKRITLSPRNYWVRGIEPRYSQ-----------SFMIGPY 433
Cdd:COG4774 222 YSDSETDSATLRLEHDFNDNWTLR-NALRYSDYDRDYRNTYPTGGNATGTVTRSAYRRDQDNdtlsnqtdltgKFDTGGV 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 434 AHEVGVGYRYVNESTHEMRYYTATSSGQLP----------SGSSPYDRDTRSGTEAHAWYLDDKIDIG-NWTITPGMRFE 502
Cdd:COG4774 301 KHTLLAGVEYSREDSDNARYSGGGTAPTVNlynpvygapvTGPTLGGADNDSRTDTTGLYLQDTISLTdRWSLLAGLRYD 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 503 HIE-SYQNNAIKGTHEEVSYNAPLPALNVLYHLTDSWNLYANTEGSFgTVQYSQIGKAVQSGNVEPEKARTWELGTRYD- 580
Cdd:COG4774 381 RFDtDYTDRTTGATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSF-NPGGGAPSLSNAGQALDPEKSRQYEVGVKWDl 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 581 -DGALTAEMGLFLINFNNQY--DSNQTNDTVTArGKTRHTGLETQARydlGTLTPtldNVSVYASYAYVNAEIRE--KGD 655
Cdd:COG4774 460 lDGRLSLTAALFRIEKTNVRttDPANPGVYVQT-GEQRSRGVELEAT---GELTP---GWSVLAGYTYLDAEITKsaNAA 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 656 TYGNQVPFSPKHKGTLGVDYK--PGNWTFNLNSDFQSSQFADNANTVkesadgstgRIPGFMLWGARVAYDFGPqmaDLN 733
Cdd:COG4774 533 NVGNRLPNVPRHSASLWTTYDlpLPGLTLGGGVRYVGSRYADAANTV---------KLPSYTRFDAGASYRLNK---NLT 600
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 1465504975 734 LAFGVKNIFDQDYFIRSYDDNNkgIYAGQPRTLYMQGSLKF 774
Cdd:COG4774 601 LRLNVNNLTDKRYYASAYGSGY--VTPGAPRTVLLSASYRF 639
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
86-729 |
2.83e-62 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 220.11 E-value: 2.83e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 86 LLDGSGLQVKPLGNNSWTLEPAPAPKEDALTVVGDwlgdARENDVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSA 165
Cdd:COG4771 1 LLLASLLLLLALAAQAADALAEDATELEEVVVTAT----RTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 166 PENNGTGShdlAMNFGIRGLNPRlasRSTVLMDGIPVPFAPYGQPqLSLAPVSLGNMDAIDVVRGGGAVRYGPQSVGGVV 245
Cdd:COG4771 77 TRSGGRGG---SSGISIRGLGGD---RVLVLIDGVPVNNPALGGG-GDLSYIPPDDIERIEVIRGPASALYGSDAIGGVI 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 246 NFVTRAIPQDFGIEAGVEgqlspTSSQNNPKETHNLMVGGTADNGFGTALL-------YSGTRGSDWREHSATRIDDLML 318
Cdd:COG4771 150 NIITKKPTDELEGSVSLG-----YGSNGNGTYSGSLSLGGPGDKLSFLLSGsyrdrdgYLDYRNGGFVGNSGYERYNLNA 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 319 KSKYAPNKVHTFNSLLQYYDGEADMPGGLSRADYDADRWQSTRPYDRFWGRrklASLGYQFQPDSQHKFNILGFYTQTLR 398
Cdd:COG4771 225 KLGYRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNAGDRDTTTDRGN---YSLRYNGDLGDNLDLSLYYSRTDRDS 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 399 SGYLEQGKRITLSPRNYWVRGIEPRYSQSFmigPYAHEVGVGYRYVNESTHEMRYYTATSsgqlpsgsspYDRDTrsgte 478
Cdd:COG4771 302 TNGSLGGSTGSFSDSDDTTYGLELDLTYPL---GGNHTLTLGAEYRYDDLDSSSFLGGAD----------ASRDT----- 363
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 479 aHAWYLDDKIDIG-NWTITPGMRFEHIESYQNNaikgtheevSYNAPLPALNVLYHLTDSWNLYANTEGSFGTVQYSQIG 557
Cdd:COG4771 364 -YGLFAQDEWKLTdKLTLTAGLRYDYYSTFGAS---------NYTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELY 433
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 558 KAVQSG---------NVEPEKARTWELGTRYD--DGALTAEMGLFLINFNNQYDSNQTNDTVTA------RGKTRHTGLE 620
Cdd:COG4771 434 GSGTGTpgryvlgnpDLKPETSDNYELGLEYRlgNGGLSLSLTGFYTDIKDLIVLVPVGPGPGDvlqyenVGKARTYGLE 513
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 621 TQARYDLGtltptlDNVSVYASYAYVNAEIREkgDTYGNQVPFSPKHKGTLGVDYKPGNWTFNLNSDFQSSQFADNANTv 700
Cdd:COG4771 514 LELKYRLG------KGLTLTASYTYLDSKIDD--GDTGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTPPS- 584
|
650 660
....*....|....*....|....*....
gi 1465504975 701 kesaDGSTGRIPGFMLWGARVAYDFGPQM 729
Cdd:COG4771 585 ----GRLEGYTPGYTLLDLRASYKLTKNL 609
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
83-774 |
4.46e-60 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 215.91 E-value: 4.46e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 83 LQQLLDGSGLQVKPLGNNSWTLEPAP--APKEDALTVVGDWLGDARENDVFEHAGAR------------DVIRREDFAKT 148
Cdd:COG4773 1 AAALLAGSGLAAAAAGALAQAAAAAAaeATTLPEVTVTGTAEGTGGYTAKSSSTATKldtplretpqsvSVVTRQLIEDQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 149 GATTMREVLNRIPGVSApENNGTGSHDlamNFGIRGLNPrlasrSTVLMDGIPVPFAPYGQPQLSlapvslgNMDAIDVV 228
Cdd:COG4773 81 GATTLDDALRNVPGVTV-SSYDGGGRD---SFSIRGFSI-----DNYLRDGLPLGGFGGGQPDTA-------NLERVEVL 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 229 RGGGAVRYGPQSVGGVVNFVTRAiPQDfgiEAGVEGQLSpTSSQNNPKEThnLMVGG--TADNGFGTALLYSGTRGSDWR 306
Cdd:COG4773 145 KGPAGLLYGAGSPGGLVNLVTKR-PTA---EPQGEVSLS-AGSWDTYRAT--ADVGGplNEDGTLRYRLNAAYEDGDSFR 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 307 EHSATRIDDLMLKSKYAPNKVHTFNSLLQYYDGEADMPGGL-----SRADYDADRWQSTrPYDRFWGRRKLASLGYQFQP 381
Cdd:COG4773 218 DGVDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDDSTGDRGFlpldgTLLDLPRSTNLGE-PWDYYDTETTTLFAELEHRF 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 382 DSQHKFNILGFYTQT---LRSGYLEQGKRIT--LSPRNYWVRGIEPRYSQ-------SFMIGPYAHEVGVGYRYVNESTH 449
Cdd:COG4773 297 NDDWSLRANARYSDSdrdGRSAYAYGAPDAAtgTLTRYASARDGDSRSDSldanlngKFETGGLEHTLLVGADYSRYDSD 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 450 EMRYYTAT------SSGQLPsGSSPYDRDTRSGTEAHAWYLDDKIDIG-NWTITPGMRFEHIESYQNNAIKGTHEEVSYN 522
Cdd:COG4773 377 SDSATAGTiniynpVYGNLP-EPDFDASDTDTTTRQTGLYAQDQISLTdRLSLLLGGRYDWYETDSTNRLGGSTTSYDDS 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 523 APLPALNVLYHLTDSWNLYANTEGSFgtvqYSQIGKAVQSGNVEPEKARTWELGTRYD--DGALTAEMGLFLINFNNQYD 600
Cdd:COG4773 456 AFTPRAGLVYDLTPGLSLYASYSESF----EPQSGADNNGNPLDPETGKQYEAGVKGElfDGRLNATLAVFDITQKNVAT 531
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 601 SNQTNDTV-TARGKTRHTGLETQARYDLgtltptLDNVSVYASYAYVNAEIREKGDTY-GNQVPFSPKHKGTLGVDYKPG 678
Cdd:COG4773 532 TDPDNPNFyVQVGEVRSRGVELELSGEL------TPGLNLIAGYTYTDAKITKDADALeGKRLTNVPRHTASLWTTYRFP 605
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 679 N-----WTFNLNSDFQSSQFADNANTVKesadgstgrIPGFMLWGARVAYDFGPqmaDLNLAFGVKNIFDQDYFIRSYDD 753
Cdd:COG4773 606 SgalkgLGLGGGVRYVGERYGDAANTFT---------LPSYTLVDAGARYDLGK---NWTLQLNVNNLFDKKYYASSGSR 673
|
730 740
....*....|....*....|.
gi 1465504975 754 NNkgIYAGQPRTLYMQGSLKF 774
Cdd:COG4773 674 GY--VYYGAPRNVRLSLSYKF 692
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
328-773 |
2.52e-41 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 158.01 E-value: 2.52e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 328 HTFNSLLQYYDGEADMPGGLSRADYDADRWQSTRPyDRFWGRRKLASLGYQFQPDSQHKFNILGFYTQTLRSGYLEQGKR 407
Cdd:pfam00593 13 TLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDR-PLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLRYSSLD 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 408 ITLSPRNYWVRGIEPRYSQSFMIGPYAHEVGVGYRY---------VNESTHEMRYYTATSSGQLPSGSSPYDRDTRSGTE 478
Cdd:pfam00593 92 GDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLdlshdlllgVELRTAGLDYRRLDDDAYDPYDPANPSSSSYSDTT 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 479 AHAW--YLDDKIDI-GNWTITPGMRFEHIE-SYQNNAIKGTHEEVSYNAPLPALNVLYHLTDSWNLYANTEGSFGTVQYS 554
Cdd:pfam00593 172 TDSYglYLQDNIKLtDRLTLTLGLRYDHYStDGDDGNGGGDNFSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLG 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 555 QI--------GKAVQSGNV--EPEKARTWELGTRYDDGALTAEMGLFLINFNNQYDSNQTNDTVTAR-------GKTRHT 617
Cdd:pfam00593 252 ELygsgsgggGGAVAGGNPdlKPETSDNYELGLKYDDGRLSLSLALFYIDIKNLITSDPDGPGLGGTvytytnvGKARIR 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 618 GLETQARYDLgtltptLDNVSVYASYAYVNAEIREKGDTYGNQVPFSPKHKGTLGVDYKP--GNWTFNLNSDFQSSQFAD 695
Cdd:pfam00593 332 GVELELSGRL------WGLGLSGGGYTYTDADDDADADDTGNPLPNVPRHTANLGLTYDFplGGWGARLGARYVGSGERR 405
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1465504975 696 NANtvkesaDGSTGRIPGFMLWGARVAYDFGPqmaDLNLAFGVKNIFDQDYF-IRSYDDNNKGIYAGQPRTLYMQGSLK 773
Cdd:pfam00593 406 YGD------AANTFKTPGYTLVDLSAGYRLNK---NLTLRLGVNNLFDKYYKrYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
113-746 |
3.04e-41 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 161.43 E-value: 3.04e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 113 DALTVVGDWLGDARENDVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSAPEnngtGSHDLAMNFGIRGLNPrlaSR 192
Cdd:TIGR01786 1 DTITVTATRTADPQRRDLSVTPASVSVISREQLKSQQVRNLRDLLRYEPGVSVVE----GGRGGSQGINIRGLDK---NR 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 193 STVLMDGIPVPFAPYGQPQLSLAPVSLG--NMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIP------QDFGieagveG 264
Cdd:TIGR01786 74 VAVLVDGIRQNTSYGGQGSTFYAINSIDpeLIKSIEIVKGASSSLYGSGALGGVVAFRTKDAAdllkpgKDLG------G 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 265 QLSPTSSQNNPKETHNLMVGGTADNGFGtALLYSGTRGSDWREHSATRIDD----------------LMLKSKYAPNKVH 328
Cdd:TIGR01786 148 LSKLGYSSANNRFTQSVAAAGRNDDVDA-LVQATYRRGHELKNGNKANIGNeskrskpnpsdyksqsFLAKLGWQLNDAH 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 329 TFNSLLQYYDGEADMPGGLSRAdYDADRWQSTRPYDRF-------WGRRklASLGYQFQPD-SQHKFNILGFYTQTLR-- 398
Cdd:TIGR01786 227 RLGLSLEYTQTDYDEPEMTNTS-YLTKPLGAPLLSSTVvlgdsktRDRR--TGLDYELNPDnSWLDTVKLALDKQYIQly 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 399 ----------SGYLEQGKRITLSpRNYWVRGIEPRYSQSFmiGPYAHEVGVG-YRYVNESTHEMRYYTATSSGQLPSGSS 467
Cdd:TIGR01786 304 nylnatsasdYPGVDKNGRYKDK-YDYYTLGFDTNNKIEF--SVHSLSLTYGlDRFKDKVSTGDSRRNLPTAAYNLYGYE 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 468 PYDRDTRsGTEAHAWYLDDKIDIGNWTITPGMRFEH-------IESYQNNAIKGTHEEVSYNAPLPalnvlYHLTDSWNL 540
Cdd:TIGR01786 381 GENRPVK-GSNFGLFLQDNIKLGDWLSLSAGLRYDHyktdpkaDESKDYGAISKTYSRWSPSLGLT-----YKPTPWLTL 454
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 541 YAN-TEG----SFGTVQYSQIGKAVQSG------NVEPEKARTWELGTRYDDGALTAEMGLF----------------LI 593
Cdd:TIGR01786 455 YYSySQGfrapSFDELYGTGAHPGGGPYtflpnpNLKPETSKNWEIGINLHFDQLDFKVSYFrndykdfidlgigvtaKG 534
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 594 NFNNQYDSNQTNDTVTARGKTRhtGLETQARYDLGTLTPTLDNVSVYASYAYVnaeirEKGDTYGNQVPFS-PKHKGTLG 672
Cdd:TIGR01786 535 NMAQVGSNTITNYVNIDNARIR--GIELSGRYDLGSFFSGPDGWTTTLKYGYT-----KGKDSDTNPWLNAiTPLKVVLG 607
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 673 VDY--KPGNWTFNLNSDFQSSQFADNA----NTVKESADGSTGRIPGFMLWGARVAYDFgpqMADLNLAFGVKNIFDQDY 746
Cdd:TIGR01786 608 LGYdhPDEKWGVGLTLTFSGAKDAVDAyatyYENGEAAKAGPLRTPSYTVVDLYGYYKP---NKNLTLRFGVYNLLDRKY 684
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
127-746 |
4.02e-38 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 151.39 E-value: 4.02e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 127 ENDVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSApenNGTGShDLAMNFGIRGLNPrlaSRSTVLMDGIPVPFAp 206
Cdd:TIGR01785 12 RQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDV---TGGGR-PPGQSINIRGLQD---NRVLVVVDGARQNYQ- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 207 YGQPQLSLAPVSLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAiPQDF---GIEAGVEGQLSpTSSQNNPKETHNLMV 283
Cdd:TIGR01785 84 RGGAHNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKD-AADLlrpGQLFGGLAKLS-YGSNNNSFGGSVAVA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 284 GGTADNGfgTALLYSGTRGS-DWR-------EHSATRIDDLMLKSKYAPNKVHTFNSLLQYYDGEADMPGglSRADYDAD 355
Cdd:TIGR01785 162 GRLDDNL--DALVAATYRDGgNYRngnkeeaTNSAYVQKNLLAKLGWQLDDAQRLEFSYFTTEGSLDEAQ--NSGPGTEY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 356 RWQSTRPYDRFWGRRKLASLGYQFQPDSQ--HKFNILGFYTQTLRSGYLEQGKRITLSPRNYWVRGIEPRYSQSFMIGPY 433
Cdd:TIGR01785 238 VLGSSSTLLASSTRDRSATLTYNWTPEDNpwLDATASLYYNRTENDNDRSARGVGREEGYQYTTYGATLQNTSRFDVASW 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 434 AH-EVGVGYRYvnestHEMRYYTATSSGQLPSGSSPYDRDTRSgteaHAWYLDDKIDIGN--WTITPGMRFEHIESYQNN 510
Cdd:TIGR01785 318 STlTYGVDWMK-----DKRRTESFDPNSVTTIVPNPPSAKEYF----FGLFLQDNIPLLDdrLTLSAGLRYDHYKLSPKT 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 511 AIKGTHEEVSYNAPLPALNVLYHLTDSWNLYAN-TEG----SFGTVQYSQIGKAVQSG-------NVEPEKARTWELG-- 576
Cdd:TIGR01785 389 TADTEAVDRSYSRWSPSLGLSYKPVDWLTLYASySQGfrapSIDELYGTGDHPGTPGGytfapnpNLKPETSKTWELGan 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 577 -----TRYDDGALTAEMGLFLINFNNQYDSNQTNDTVTARG-----------KTRHTGLETQARYDLGtltptldNVSVY 640
Cdd:TIGR01785 469 lsfdnLLLDNDQLQFKVAYFYNDVKDFIDLTIGVTDNVTAGmnnitqyvnidGARIRGIEASASYDAG-------LWATG 541
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 641 ASYAYVNAEIREKGDTYGNqvpfSPKHKGTLGVDYKPGNWTFNLNSDFQSSQFADNANTVKESADGSTGRIPGFMLWGAR 720
Cdd:TIGR01785 542 LSYGYTIGKDQNTNQWLSN----IPPLKLVVTVGYRFPDRRLDLGAKAAYYERQSESPTTEDVAANGLLTTPGYTVVDLY 617
|
650 660
....*....|....*....|....*.
gi 1465504975 721 VAYDFGpQMADLNLAFGVKNIFDQDY 746
Cdd:TIGR01785 618 ATYQPN-AVKGLTVRFGVNNLTDRKY 642
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
134-401 |
6.84e-26 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 108.04 E-value: 6.84e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 134 AGARDVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGShdlAMNFGIRGLNprlASRSTVLMDGIPVPFAPYGQPQLS 213
Cdd:COG4206 16 TGSVTVIDAEELERSGATSLADALRRVPGVQVSSSGGPGS---AASISIRGLG---SNQTLVLIDGVPLNDPSLGGVDLS 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 214 LapVSLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGVEGqlsptSSQNNPKETHNLMvGGTADNGFGT 293
Cdd:COG4206 90 L--IPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASY-----GSFGTRRLSASLS-GGAGKFSYSL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 294 ALLYSGTRG-----SDWREHSATRIDDLMLKSKYAPNKVHTFNSLLQYYDGEADMPGGLSRADYDADRWQSTRPYDRFWG 368
Cdd:COG4206 162 SASYRRSDGyryndPDLRNNDGYENTSLNARLGYKLGDNGSLSLSGGYSDSERGYPGAVGSDRNLRLSLSLEYKLSDGWS 241
|
250 260 270
....*....|....*....|....*....|...
gi 1465504975 369 RRKLASLGYQFQPDSQHKFNILGFYTQTLRSGY 401
Cdd:COG4206 242 LLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGL 274
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
129-244 |
1.27e-21 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 90.41 E-value: 1.27e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 129 DVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGshdlAMNFGIRGLNPrlaSRSTVLMDGIPVPFAPYG 208
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGGGGG----GSSISIRGFGS---NRVLVLVDGVPLNSGGGG 73
|
90 100 110
....*....|....*....|....*....|....*.
gi 1465504975 209 QPQLSLAPVSlgNMDAIDVVRGGGAVRYGPQSVGGV 244
Cdd:pfam07715 74 SVDLNSIDPE--DIERVEVLKGPASALYGSGAIGGV 107
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
109-761 |
9.36e-20 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 94.32 E-value: 9.36e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 109 APKEDALTVVGDwlgdARENDVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSAPENNG-TGshdlAMNFGIRGLNp 187
Cdd:PRK13486 22 AAAEDVMIVSAS----GYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDVESGTGkTG----GLEISIRGMP- 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 188 rlASRSTVLMDGI------PVPFAPYGQPQLSLAPvSLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDF--GIE 259
Cdd:PRK13486 93 --ASYTLILIDGVrqggssDVTPNGFSAMNTGFMP-PLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKWlsSVN 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 260 AGVEGQLSP---TSSQNNPKETHNLMVGGTADNGFGTALLYSGTRGSDWREHSATRIDdlmlkskyAPNKVHTFN--SLL 334
Cdd:PRK13486 170 AGLNLQESNkwgNSSQFNFWSSGPLVDDSVSLQVRGSTQQRQGSSVTSLSDTAATRIP--------YPTESQNYNlgARL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 335 QYYDGEAD---MPGGLSRADYDADRWQ---STRPYDRF--WGRRKLaSLGYqfqpdsQHKFNiLGFYTQTLRSGYLE--- 403
Cdd:PRK13486 242 DWKASEQDvlwFDMDTTRQRYDNRDGQlgsLTGGYDRTlrYERNKI-SAGY------DHTFT-FGTWKSYLNWNETEnkg 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 404 -QGKRITLSPRNYWVRGiEPRYSQ-------SFMIGPY--AHEVGVGYRYVNESTHEmryytatsSGQLPSGSSPYDRDT 473
Cdd:PRK13486 314 rELVRSVLKRDKWGLAG-QPRELKesnlilnSLLLTPLgeSHLVTVGGEFQSSSMKD--------GVVLASTGETFRQKS 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 474 RSGTEAHAWYLDDKIdignwTITPGMRFEHIESYqnnaikGTHEEvsynaplPALNVLYHLTDSWNLYANTEGSFGTVQY 553
Cdd:PRK13486 385 WSVFAEDEWHLTDAL-----ALTAGSRYEHHEQF------GGHFS-------PRAYLVWDVADAWTLKGGVTTGYKAPRM 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 554 SQIGKAVQS----------GN--VEPEKARTWELGTRYDDGA-LTAEMGLFLINFNNQ---YDSNQTNDTVTARGKTRHT 617
Cdd:PRK13486 447 GQLHKGISGvsgqgktnllGNpdLKPEESVSYEAGVYYDNPAgLNANVTGFMTDFSNKivsYSINDNTNSYVNSGKARLH 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 618 GLETQarydlGTLTPTLDNVSVYASYAYVNAEIREkGDTYGNQVPFSPKHKGTLGVdykpgNW--TFNLNSDF------Q 689
Cdd:PRK13486 527 GVEFA-----GTLPLWSEDVTLSLNYTWTRSEQRD-GDNKGAPLSYTPEHMVNAKL-----NWqiTEEVASWLgaryrgK 595
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1465504975 690 SSQFADNANTV----KESADGSTGRIPGFMLWGARVAYDFgpqMADLNLAFGVKNIFDQDYF-IRSYDDNNKGIYAG 761
Cdd:PRK13486 596 TPRFTQNYSSLsavqKKVYDEKGEYLKAWTVVDAGLSWKM---TDALTLNAAVNNLLNKDYSdVSLYSAGKSTLYAG 669
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
139-746 |
2.45e-19 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 92.94 E-value: 2.45e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 139 VIRREDFAKTGATT-MREVLNRIPGVSAPENNGTGSHDLamnFGIRGLNprlASRSTVLMDGIPVpFApYGQPQLSLAPV 217
Cdd:PRK14050 85 VVGRQEMDDRGVTNkVDEALRYTPGVLSQPFGTDGDTDW---FYIRGFD---ATQTGVFLDGLNL-FS-YGFGGFQIDPF 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 218 SLgnmDAIDVVRGGGAVRYGPQSVGGVVNFVTRAiPQD---FGIEAGVEGQLSP-----TSSQNNPKETHNLMVGGTADN 289
Cdd:PRK14050 157 ML---ERVEVLKGPASVLYGGSNPGGIVNMVSKR-PLDeplYYTEIGINSYGNAftgfdVGDKLSDDGTVRYRVTGKVAG 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 290 GFGTALLYSGTRGS-----DWREHSATRIDDLMLKSkyAPNKVHTFNSLLQYYDGEADMPGGlsraDYDADRWQSTRPYD 364
Cdd:PRK14050 233 GDNYSDYSEDLRGFimpqiTYAPDDATSLTVYGYLS--GLDQVHVGNGFLPYVGTVVDAPFG----KIDRDAFYGEPDID 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 365 RfwGRRKLASLGYQFQpdsqHKFNILGFYTQTLRSGYLEQgKRITLSPRNYW---VRGIEP------------------- 422
Cdd:PRK14050 307 N--GSYAQQMLGYEFS----HEFDNGWTFSQNARYGHLHK-HEKGPYTYGYVggaTGLPDPtgpdymlnrigfehrskvd 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 423 ------RYSQSFMIGPYAHE--VGVGYRYvnestHEMRYYTATSSGQLPSGSSPYDRDTRSGTEAHA----------WYL 484
Cdd:PRK14050 380 sfsidnRLEGEFDTGALTHNllFGLDYKY-----YRLDQVQACCGATPISATNPVYGTTQGANFVYLdqiltqqqigIYA 454
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 485 DDKIDIGN-WTITPGMRFEHIESYQNNAIkGTHEEVSYNAPLPALNVLYHLTDSWNLYAntegSFGTVQYSQIGKAVQSG 563
Cdd:PRK14050 455 QDQIRFGDgWLVTLNGRYDYVDTDSDARI-GTSYESNDGALSGRAGLAYEFDNGLTPYV----SAATFFNPLVGTLASGP 529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 564 NVEPEKARTWELGTRYD----DGALTAEmgLFLINFNNQYDSNQTNDTVTARGKTRHTGLETQARYDLGtltptlDNVSV 639
Cdd:PRK14050 530 PLKPEEGEQYEAGIKYEpsfiDGLITAS--VFQITKKNVTVTDPLTFASTQLGEVRSRGFELEGKVNLD------DNWKA 601
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 640 YASYAYVNAEIREKGDT--YGNQVPFSPKHKGTLGVDYKPGNWTFNLNS-----DFQSSQFADNANTVKesadgstgrIP 712
Cdd:PRK14050 602 LASFTYTDLEITEDANPslIGNSPYLVPETQASLWLDYAVTDGAFEGVSlgagvRYQGESWADEANTLK---------VP 672
|
650 660 670
....*....|....*....|....*....|....
gi 1465504975 713 GFMLWGARVAYDFGPQMADLNLAfgvkNIFDQDY 746
Cdd:PRK14050 673 AATLFDAAIRYEKNDWGASLNVA----NLFDKEY 702
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
105-757 |
3.71e-15 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 79.54 E-value: 3.71e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 105 EPAPAPKEDALTVVgdWLGDARENDVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSApenngTGSHDLAMNFGIRG 184
Cdd:PRK10064 21 WPVLAVDDDGETMV--VTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQL-----TNEGDNRKGVSIRG 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 185 LNprlASRSTVLMDGIPVPF--APYGQPQLSLAPVSLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGV 262
Cdd:PRK10064 94 LD---SSYTLILIDGKRVNSrnAVFRHNDFDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWHGTVTV 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 263 EGQLSPTSSQNNPKETHNLMVGGTADNGFGTALLYS-GTRGSDWREHSAT-------RID-----DLMLKSKYAPNKVHT 329
Cdd:PRK10064 171 DTTIQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSlAKREKDDPQNSTTtdtgetpRIEgftsrDGNVEFAWTPNQNHD 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 330 FNSLLqyydgeadmpgGLSRADYDADRWQSTRpydrfwgrrkLASLGYQFQPDSQHKF--NILGFYTQTLRSGYLEQGKR 407
Cdd:PRK10064 251 FTAGY-----------GFDRQDRDSDSLDKNR----------LERQNYSLSHNGRWDYgnSELKYYGEKVENKNPGNSSP 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 408 ITlSPRNywvrGIEPRYSqsFMIGPYAHEVGVGyryvnestHEMRYYTATSSGQLPSGSSpydrdTRSGTEAHAWYLDDK 487
Cdd:PRK10064 310 IT-SESN----SIDGKYT--LPLTAINQFLTFG--------GEWRHDKLSDAVNLTGGTS-----SKTSASQYALFVEDE 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 488 IDI-GNWTITPGMRFEHIESYqnnaikGTHeevsyNAPLPALnvLYHLTDSWNLYANTEGSFGTVQYSQIG--------- 557
Cdd:PRK10064 370 WRIfEPLALTTGVRMDDHETY------GDH-----WSPRAYL--VYNATDTVTVKGGWATAFKAPSLLQLSpdwtsnscr 436
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 558 ---KAVQSGNVEPEKARTWELGTRYD--DGAL---TAEMGLFLINFNNQYDSNQTNDTVTARG----------------- 612
Cdd:PRK10064 437 gacKIVGSPDLKPETSESWELGLYYMgeEGWLegvESSVTVFRNDVDDRISISRTSDVNAAPGyqnfvgfetngrgrrvp 516
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 613 --------KTRHTGLETQARYDLGtltptlDNVSVYASYAYVNA-EIREKGDTYGNQVPFspkHKGTLGVDYKPG---NW 680
Cdd:PRK10064 517 vfryynvnKARIQGVETELKIPFN------DEWKLSLNYTYNDGrDVSNGENKPLSDLPF---HTANGTLDWKPLaleDW 587
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1465504975 681 TFNLNSDFQSSQFADNAntvkesadgsTGRIPG-FMLWGARVAYDFGpqmADLNLAFGVKNIFDQDYFIRSYDDNNKG 757
Cdd:PRK10064 588 SFYVSGNYTGQKRADSA----------TAKTPGgYTIWNTGAAWQVT---KDVKLRAGVLNLGDKDLSRDDYSYNEDG 652
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
139-774 |
4.55e-14 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 75.97 E-value: 4.55e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 139 VIRREDFAKTGATTMREVLNRIPGVsapenNGTGSHDLAmNFGIRGLNprlASRSTVLMDGI--------PVPFAPyGQP 210
Cdd:PRK13483 56 VITREDLENRFYRDLTDALLDVPGV-----VVTGGGDRT-DISLRGMG---SQYTLILVDGKrqssretrPNSDGP-GVE 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 211 QLSLAPvsLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGVEGQLSPTSSQNNPKETHNLMVGGTADNG 290
Cdd:PRK13483 126 QAWTPP--LAAIERIEVIRGPMSSLYGSDAIGGVINIITRKVPNEWQGEVRLDTTLQENSDSGNVYQANFFVNGPLIKDL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 291 FGTAL-----------LYSGTRGSDwrehsatrIDDLMLKSKYAPNKVHtfnsllqyydgEADMPGGLSRADYDADRWQS 359
Cdd:PRK13483 204 LGLQLygqytqreeddIEGGYRDKD--------ARSLTAKLALTPNEDH-----------DIMLEVGTSNQERDSTVGKT 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 360 TRPYDRF--WGRRKLASLGY-QFQPDS---QHKfnilGFYTQTLRSGYLEQGKRITLSpRNYWVRGIEPRYSQSFMIGPy 433
Cdd:PRK13483 265 VAPLAPGesCGRRGCPESSTtEYERSTvslSHT----GRWDFGTSDTYIQHEEFDNKS-REMKIKNTDFQSSLVAPLGQ- 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 434 AHEVGVGYRYVNESthemryYTATSSGQLpSGSSPYDRDTRSGTEAHAWYLDDkidigNWTITPGMRFEHIESYqnnaik 513
Cdd:PRK13483 339 EHTLTFGAAYNHQD------LTDETSNQI-SDLTDISRTQWAVFSEDEWRIAD-----DFALTGGLRLDHDENF------ 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 514 GTHeeVSynaplPALNVLYHLTDSWNLYANTEGSFGTVQYSQI----GKAVQSGNV------EPEKARTWELGTRYDDGA 583
Cdd:PRK13483 401 GGH--VS-----PRVYGVWNLAPSWTVKGGVSTGFRAPSLRQTtpdwGQVSRGGNIygnpdlKPETSLNKELGLYYDLGS 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 584 -LTAEMGLFLINFN-----------------NQYDSNQTNDTVTARGKTRhtGLETQARYdlgtltPTLDNVSVYASYAY 645
Cdd:PRK13483 474 gLTASLTVFYNEFKdkitrvacpatqctdgpNQFGADPTTYVNIDEAVTQ--GVEASLSY------PITSTLSLSGNYTY 545
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 646 VNAEiREKGDTYGNQVPFSPKHKGTLGVDYKPGN----WTfNLNSDFQSSQfadnantVKESADGSTGRIPGFMLWGARV 721
Cdd:PRK13483 546 TDSE-QKSGAYKGSPLNQLPKHLFQASLNWEPTDrlnsWA-RVNYRGEESQ-------PTTGPSSSSFIAPSYTFLDLGA 616
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 1465504975 722 AYdfgpQMAD-LNLAFGVKNIFDQDYFIRSYDdnnkgiYAGQPRTLYMQGSLKF 774
Cdd:PRK13483 617 NY----QLTDnLKLSAGIYNLFDKEINYEEYG------YVEDGRRYWLGMTYSF 660
|
|
| STN |
smart00965 |
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ... |
56-107 |
3.06e-12 |
|
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.
Pssm-ID: 198033 [Multi-domain] Cd Length: 52 Bit Score: 61.75 E-value: 3.06e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 1465504975 56 ITLSVDASLTRGKQSNGLHGDYDVESGLQQLLDGSGLQVKPLGNNSWTLEPA 107
Cdd:smart00965 1 LNFVYDPALVAGRRVSLLLGNVTVEQALDRLLAGTGLTYRRIGGNTIVLSPA 52
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
86-744 |
6.00e-11 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 65.93 E-value: 6.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 86 LLDGSGLQVKplgnnswTLEPAPAPKEDALTVVGdwlgdARENDVFEHAGArDVIRREDFAKTGATT-MREVLNRIPGVS 164
Cdd:PRK13528 15 LLVGLNSPVS-------AAESSDDDNGETMVVEA-----TAEQELKQQPGV-SIITAEDIKKRPPVNdLSDIIRKMPGVN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 165 APENNGTGSHDLAMNFGIRGLNPRlasRSTVLMDGIPVP------FAPYGQPQL----SLAPVSLgnMDAIDVVRGGGAV 234
Cdd:PRK13528 82 LTGNSASGTRGNNRQIDIRGMGPE---NTLILIDGVPVTsrnsvrYSWRGERDTrgdtNWVPPEM--VERIEVIRGPAAA 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 235 RYGPQSVGGVVNFVTRAIPQDFgieagvEGQLS-----PTSSQNNPKETHNLMVGGT-ADNGFGTALL--YSGTRGSDW- 305
Cdd:PRK13528 157 RYGSGAAGGVVNIITKRPTNDW------HGSLSlytnqPESSKEGATRRANFSLSGPlAGDALTMRLYgnLNKTDADSWd 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 306 ------------REHSATRIDDLMLKSKYAPNKVhtfnsllqyydgeADMPGGLSRAD--YDADRWQST----------- 360
Cdd:PRK13528 231 inssagtknaagREGVRNKDINGVLSWKMTPQQI-------------LDFEAGYSRQGniYAGDTQNSNssavteslaks 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 361 -----RPYDRFWGrrkLASLGYQFQPDSQhkfniLGFYTQTLRSGYLEQG-------------KRITLSPRNYwvrgiep 422
Cdd:PRK13528 298 gketnRLYRQNYG---LTHNGIWDWGQSR-----LGFYYEKTNNTRMNEGlagggegritadqTFTTSRLESY------- 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 423 RYSQSFMIG---PYAHEVGVGYRYVNESTHE---MRYytATSSGQLPSGS-SPYDRDTRSGTEAHAWYLDDKIDIG-NWT 494
Cdd:PRK13528 363 RTSGELNVPlnwLFEQTLTVGAEWNRDELNDpssTSL--TVKDGDIGGISgSAADRSSKNKSEISALYVEDNIEPVpGTN 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 495 ITPGMRFEHIESYQNNAIkgtheevsynaplPALNVLYHLTDSW-------------NLYANTEGSFGTVQYSQIGKAVQ 561
Cdd:PRK13528 441 LIPGLRFDYHSEFGSNWS-------------PSLNLSQELGDYFkvkagiarafkapNLYQSSEGYLLYSRGNGCPKDIT 507
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 562 SG--------NVEPEKARTWELGTRYDDGALTAEMGLflinFNNQY-DSNQTNDTVTAR-------------GKTRHTGL 619
Cdd:PRK13528 508 SGgcylvgnkNLDPEISVNKEIGLEFTVDDYHASVTY----FRNDYqNKIVAGDDVIGRtasgayilqwqngGKAVVEGL 583
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 620 EtqarydlGTLTPTL--DNVSVYASYAYVnaeIREKGDTYGNQVPFSPKH--KGTLGVDYKPgNWTFNLNSDFQSSQFAD 695
Cdd:PRK13528 584 E-------GNLLVPLmkDRLNWNTNATYM---ITSEQKDTGNPLSVIPKYtiNSTLDWQITQ-ALSANVNWTLYGKQKPR 652
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|.
gi 1465504975 696 NANTVKESADGSTGR--IPGFMLWGARVAYDFGpqmADLNLAFGVKNIFDQ 744
Cdd:PRK13528 653 THAESRSEETGGLSGkeLGAYSLVGVNVNYDIN---KNLRLNVGVSNLFDK 700
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
425-774 |
1.35e-10 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 64.83 E-value: 1.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 425 SQSFMIGPYAHEVGVGYRYVNESTHEMRYYTAT---------SSGQLPSGSSPYDRDTRSGTEAHAWYLDDKIDIG-NWT 494
Cdd:PRK09840 383 TSTFYTGSIGHDVSTGVEFTRETQTNYGVNPVTlpavnlyhpDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQLTrDWE 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 495 ITPGMRFEHIE-SYQNNAIKGTHEEVSYNAPLPA---------------------LNVLYHLTDSWNLYANTE------- 545
Cdd:PRK09840 463 LNGGIRLDNYHtEYDSATACGGSGRGAITCPAGVakgspvttvdtaksgnlvnwkAGALYKLTENGNVYINYAvsqqppg 542
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 546 GSFGTVQYSQIGKAVQSGNVEPEKARTWELGTRYD--DGALTAEMGLFLINFNNQYDSNQTnDTVTARGKTRHTGLETQA 623
Cdd:PRK09840 543 GSNFALAQSGSGNSANRTDFKPQKANTSEIGTKWQvlDKRLLLTAALFRTDIENEVEQNDD-GTYSQYGKKRVEGYELSV 621
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 624 rydLGTLTPTLdnvSVYASYAYVNAEIREKGDTY---GNQVPFSPKHKGTLgvdykpgnW-TFNLNSDFQSSQFADNANT 699
Cdd:PRK09840 622 ---AGNITPAW---QVIAGYTQQKATVKNGKDVAqdgSSSLPYTPEHAFTL--------WsQYQATDDLSVGGGARYIGS 687
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1465504975 700 VKESADGSTGR---IPGFMLWGARVAYDFGpqmADLNLAFGVKNIFDQDYfIRSYDDNNKGIYAGQPRTLYMQGSLKF 774
Cdd:PRK09840 688 MHRGSDGAVGTpafTEGYWVADAKLGYRVN---RNLDLQLNVYNLFDTDY-VASINKSGYRYHPGEPRTFLLTANMHF 761
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
138-746 |
3.86e-10 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 63.09 E-value: 3.86e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 138 DVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGShdLAMNFgIRGLNprlASRSTVLMDGIPVPFAPY-GQPQLSLAP 216
Cdd:PRK10641 47 TVVTRDDIDRWQSKSVNDVLRRLPGVDIAQNGGLGQ--LSSLF-IRGTN---SSHVLVLIDGVRLNQAGIsGSADLSQIP 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 217 VSLgnMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGVegqlSPTSSQNNPKETHNLMvggtADNGFGTAL- 295
Cdd:PRK10641 121 ISL--VQRIEYIRGPRSAVYGSDAIGGVVNIITTRDKPGTTLSAGW----GSNGYQNYDGSTQQQL----GDNTRVTLAg 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 296 LYSGTRGSDWREHSATRI------DDLMLKSKYApNKVHTFNsllQYYDGEADMPGGLSRADYDAdrwqSTRPYDRFWGR 369
Cdd:PRK10641 191 DYTYTKGFDVVAYGNTGTqaqpdrDGFMSKTLWG-GLEHQFN---DQWSGFVRGYGYDNRTDYDA----YYSPGSPLIDT 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 370 RKLASLGYqfqpDSQHKFNiLGFYTQTLRSGYlEQGKRITLSPRN------YWVRGIEPRYSQ---SFMIGPYAHEVGVG 440
Cdd:PRK10641 263 RQLYSQSW----DAGLRYN-GGIYSSQLIASY-SHSKDYNYDPHYgrydssATLDDMKQYNVQwgnTVQVGHGNISAGVD 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 441 YRyvnesthemRYYTATSSGQLPSGsspYDRDTrSGTeahawYLDDKIDIGNWTITPGMR------------------FE 502
Cdd:PRK10641 337 WQ---------KQTTTPGTGYVPDG---YDQRN-TGI-----YLTGQQQIGDVTLEGAARsddnsqfgwhgtwqtsagWE 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 503 HIESYQNNAIKGTheevSYNAPlpalnvlyhltdswnlyantegSFGTvQYSQIGKAvqsgNVEPEKARTWELGTRYDDG 582
Cdd:PRK10641 399 FIDGYRFIASYGT----AFKAP----------------------NLGQ-LYGFYGNP----NLKPEESKQWEGGFEGLTG 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 583 ALTAEMGLFLINFNNQYDSNQTNDTVTARGKTRHTGLETQARYDLGTLTPTLdnvsvyaSYAYVNAeireKGDTYGNQVP 662
Cdd:PRK10641 448 PVNWRLSGYRNDIDNLIDYDDHTLKYYNVGKATIKGVEWTGNFDTGPLTHQV-------TLDYVDP----RNAITDEPLA 516
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 663 FSPKHKGTLGVDYKPGNWTFNLNSDFQSSQFADNANTvkesADGSTGRIPGFMLWGARVAYdfgPQMADLNLAFGVKNIF 742
Cdd:PRK10641 517 RRAKQQVKYQLDWQLYDFDWGVTYQYLGTRYDKDYST----YPYQTVKLGGVSLWDLAVSY---PVTSHLTVRGKIANLF 589
|
....
gi 1465504975 743 DQDY 746
Cdd:PRK10641 590 DKDY 593
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
427-744 |
6.05e-10 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 62.61 E-value: 6.05e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 427 SFMIGPYAHEV--GVGYRYVNESTHEMRYYTATSSGQLPSGSSP---YDRDTRSGTEAH--AWYLDDKIDIGNWTITPGM 499
Cdd:PRK14049 372 KFDTGAFEHTLlaGVDYTKLRFRALNGRGVSPPLDTKNPTQGRPvaaIDFSTRTVQDQWqlGTYLQDQIRYDAWTLTAGG 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 500 RFEHIESYQNNAIKGTHEEVSYNAPLPALnvlyhltdSWNLYANTEGSFGTVQYSQIGKAV---------QSGNVEPEKA 570
Cdd:PRK14049 452 RYDWVSTDTDTTDLATDSLTTVSQKDKEF--------SGRIGLTYETDFGLAPYISYSTAFspnagfnraTNQPFKPTES 523
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 571 RTWELGTRYD--DGALTAEMGLFLINFNN-------QYDSNQTNDTVTaRGKTRHTGLETQArydlgtlTPTLDN-VSVY 640
Cdd:PRK14049 524 EQQEVGVKYLlpNSNTLITAALFNIDQTNglyyevvFLAAGPTNIQVQ-RGKLRSRGFELEA-------NTSLDNgLSLI 595
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 641 ASYAYVNAEIRE-KGDTYGNQVPFSPKHKGTLGVDYK-PGN-----WTFNLNSDFQSSQFADNANTVKESADgstgripg 713
Cdd:PRK14049 596 ASYTYTDVKIIQgPEGTIGNEVSSVPNHMASAWAHYTlPEGgplygLGLGAGARFVGSSYGNDQNTFKNSSR-------- 667
|
330 340 350
....*....|....*....|....*....|....
gi 1465504975 714 fMLWGARVAYDFG---PQMADLNLAFGVKNIFDQ 744
Cdd:PRK14049 668 -VLFDASVGYDFAaidKKYEGLMLQVNATNLFDR 700
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
566-774 |
1.01e-09 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 62.08 E-value: 1.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 566 EPEKARTWELGTRY--DDGALTAEMGLFLINFNNQYDSNQTNDTVTAR-GKTRHTGLETQARYDLGTltptldNVSVYAS 642
Cdd:PRK10044 527 APSKGKQYEAGVKYvpKDRPIVVTGAVYQLTKTNNLTADPENSFFSVQgGEIRARGVELEAKAALSA------NVNVTGS 600
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 643 YAYVNAEIREkgDTY--GNQVPFSPKHKGTLGVDYkpgnwTFN----------LNSDFQSSQFADNANTVKesadgstgr 710
Cdd:PRK10044 601 YTYTDAEYTT--DTTykGNTPAQVPKHMASLWADY-----TFFdgplsgltlgTGGRYTGSSYGDPANSFK--------- 664
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1465504975 711 IPGFMLWGARVAYD---FGpqMADLNLAFGVKNIFDQDYFIRSYddNNKGIYAGQPRTLYMQGSLKF 774
Cdd:PRK10044 665 VGSYTVVDALVKYDlarFG--MAGSSVALNVNNLFDREYVASCF--NTYGCFWGAERQVVATATFRF 727
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
139-757 |
1.85e-09 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 61.18 E-value: 1.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 139 VIRREDFAKTGATTMREVLNRIPGVSApeNNGTGSHDLAmnfgIRGLNprlASRSTVLMDGI------PVPFAPYGQPQL 212
Cdd:PRK13484 53 VITSEQLQKKPVSDLVDAVKDVEGISI--TGGNEKPDIS----IRGLS---GDYTLILVDGRrqsgreSRPNGSGGFEAG 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 213 SLAPVSLgnMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAI-PQDFGIEAGVEGQLSPTSSQNNPKETHNLMVGGTADNGF 291
Cdd:PRK13484 124 FIPPVEA--IERIEVIRGPMSSLYGSDAIGGVINIITKPVnNQTWDGVLGLGGIIQEHGKFGNSTTNDFYLSGPLIKDKL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 292 GTALlYSGT--RGSDWREHSATRIDD--LMLKSKYAPNKVHTF------NSLLQYYDGEADMPGGLSRADY-DADRWQST 360
Cdd:PRK13484 202 GLQL-YGGMnyRKEDSISQGTPAKDNknITATLQFTPTESQKFvfeygkNNQVHTLTPGESLDAWTMRGNLkQPNSKRET 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 361 RPYDRFWgrrklaSLGYQFQPDSQHKfNILGFYTQTLRSGYLEQGKRITLSPRNYWVRgiEPRYSQSFMIGPYAH----- 435
Cdd:PRK13484 281 HNSRSHW------VAAWNAQGEILHP-EIAVYQEKVIREVKSGKKDKYNHWDLNYESR--KPEITNTIIDAKVTAflpen 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 436 --EVGVGYRYVnesthEMRYYTATSSGQLPSGSSPYDRDtrsgteahAWYLDDKIDI-GNWTITPGMRFEHIESYqnnai 512
Cdd:PRK13484 352 vlTIGGQFQHA-----ELRDDSATGKKTTETQSVSIKQK--------AVFIENEYAAtDSLALTGGLRLDNHEIY----- 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 513 kGTHeevsYNaplPALNVLYHLTDSWNLYANTEGSF------------GTVqySQIGKAVQSGN--VEPEKARTWELGTR 578
Cdd:PRK13484 414 -GSY----WN---PRLYAVYNLTDNLTLKGGIAKAFrapsirevspgfGTL--TQGGASIMYGNrdLKPETSVTEEIGII 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 579 YDDG-ALTAEMGLFLINFNNQ---YDSNqTNDTVTAR--------GKTRHTGLETqarydlGTLTPTLDNVSVYASYAYV 646
Cdd:PRK13484 484 YSNDsGFSASATLFNTDFKNKltsYDIG-TKDPVTGLntfiydnvGEANIRGVEL------ATQIPVYDKWHVSANYTFT 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 647 NAeiREKGDT--------YGNQVPFSPKHKGTLGVDykpgnWTFNLNSDFQSSQFADNANTVKESADGSTG-RI-PGFML 716
Cdd:PRK13484 557 DS--RRKSDDeslngkslKGEPLERTPRHAANAKLE-----WDYTQDITFYSSLNYTGKQIWAAQRNGAKVpRVrNGFTS 629
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 1465504975 717 WGARVAYDFGPqmaDLNLAFGVKNIFDQdyfiRSYDDNNKG 757
Cdd:PRK13484 630 MDIGLNYQILP---DTLINFAVLNVTDR----KSEDIDTID 663
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
456-774 |
1.68e-08 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 58.12 E-value: 1.68e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 456 ATSSGQLPSGSSPYDRDTRSGTEAHAWYLDDKIDIGN-WTITPGMRFEHiesyqnnaikgtHEEVSYNAPlPALNVLYHL 534
Cdd:PRK13524 409 ALTSGGAIPGVSATGRSPYSKAEIFSLFAEDNMELTDsTMLTPGLRFDH------------HSIVGNNWS-PSLNLSQGL 475
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 535 TDSW-------------NLYANTEG----SFGTVQYSQIGKAVQ---SGNVEPEKARTWELGTRYDDGALTAEmglfLIN 594
Cdd:PRK13524 476 GDDFtlkmgiaraykapNLYQTNPNyilySKGQGCYASAGNGCYlqgNDDLKAETSVNKEIGLEFKRDGWLAG----LTW 551
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 595 FNNQYDSN---------QTNDTVTA------RGKTRHTGLEtqarydlGTLT-PTLDNVSVYASYAYVnaeIREKGDTYG 658
Cdd:PRK13524 552 FRNDYRNKieagyvpvgTNSVGKTDiyqwenVPKAVVEGLE-------GTLNvPVSETVNWTNNLTYM---LQSKNKTTG 621
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 659 NQVPFSPKHKGTLGVDYKPGN-WTFNLNSDFQSSQFADNANTVKESADGS-TGRIPGFMLWGARVAYDFgpqMADLNLAF 736
Cdd:PRK13524 622 DPLSIIPEYTLNSTLSWQATEdLSLQSTFTWYGKQKPKKYNYKGQPVTGSaTKEVSPYSIVGLSATYDV---TKNVSLTG 698
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1465504975 737 GVKNIFDQDYFIR--SYDDNNKGIYAG-----QP-RTLYMqgSLKF 774
Cdd:PRK13524 699 GVDNLFDKRLWREgnAQTTGDLIAGAGaytynEPgRTYYM--SLNT 742
|
|
| OMP_b-brl_3 |
pfam14905 |
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ... |
436-755 |
8.71e-08 |
|
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.
Pssm-ID: 434300 [Multi-domain] Cd Length: 407 Bit Score: 55.36 E-value: 8.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 436 EVGVGYRYVNESTHEMRYYTATSSGQLPSGSSP---YDRDTrsgteaHAWYLDDKIDIGNWTITPGMRFEHIESYQNNAI 512
Cdd:pfam14905 74 EAGAKYSFRNNDNDYDYENLDNGEWVPDPSRSNdfdYKENI------YAAYASYSKKFGKWSYQAGLRAEYTDIDGDSVT 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 513 KGTHEEVSYNAPLPALNVLYHLTDSWNLYANtegsfgtVQYSQIGK-----------------AVQSGNVE--PEKARTW 573
Cdd:pfam14905 148 TNETFKRNYFNLFPSASLSYKLNDNNSLQLS-------LYYRRIINrpsywdlnpfrnysdpyNYSQGNPNlkPEYTNSF 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 574 ELGTRYDDGaLTAEMGLFLINFNNQYDSNQ-TNDTVTAR-----GKTRHTGLETQARYDLGTLTPTLDNVSVYASYAYVN 647
Cdd:pfam14905 221 ELGYTYKWK-LSLSLSYRYTNDVIQQTFITdDNDNVTYTtyenlGKSNSYGLELSASFNPTKWWSLNGNLNGYYNKYKID 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 648 AEIREKGDTYGNQvpFSPKHKGTLgvdykPGNWTFNLNSDFQSSQfaDNANtvkesadgstGRIPGFMLWGARVAYDFgp 727
Cdd:pfam14905 300 GSLNSDFSNFGFN--WNLNNTFTL-----PKGWSLQLNGNYRSPR--VTGQ----------GKIKPFYSLDLGLSKSF-- 358
|
330 340
....*....|....*....|....*....
gi 1465504975 728 qMAD-LNLAFGVKNIFDQDYFIRSYDDNN 755
Cdd:pfam14905 359 -LKKkLTLSLNVNDIFNTRKFRSTTNYDN 386
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
138-395 |
6.82e-07 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 53.11 E-value: 6.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 138 DVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGShdlamNFGIRGLNPRLasrSTVLMDGIPVPFAPYG--QPQLSLA 215
Cdd:TIGR01782 28 DVISAEDIGKLPDVNVAEALQRVPGVSIERDQGEGR-----YVSVRGLGPSY---NRTTLNGRTIASTDSGgrAFSLDLL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 216 PVSLgnMDAIDVVRGGGAvRYGPQSVGGVVNFVTRAiPQDF---GIEAGVEGQLSPTSSQNNPKETHNLMVGGT-ADNGF 291
Cdd:TIGR01782 100 PSEL--VSGVEVYKTPTA-DMDEGGIGGTVDLRTRS-PFDYdgrTLSGSAQGGYNDLAGKDKPGPRGAASYSWTfGDGQF 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 292 GTALLYSGTRGSDWREHSATriddlmlkskYAPnkvhtfnsllQYYDGEADMPGGLsradydadrWQSTRPYDRFW---G 368
Cdd:TIGR01782 176 GVLLSASYQKRDFAEDNVET----------ENW----------GTYTSADGGAQGL---------YFPRGVRYRSYrndR 226
|
250 260
....*....|....*....|....*..
gi 1465504975 369 RRKLASLGYQFQPDSQHKFNILGFYTQ 395
Cdd:TIGR01782 227 ERKGVNGSLQWRPSDALELYLDTLYSK 253
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
139-752 |
1.20e-05 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 48.61 E-value: 1.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 139 VIRREDFAKTGATTMREVLNRIPGVSApenNGTGSHDlamNFGIRGLNP----------RLASRSTVL-MDGipvpfapY 207
Cdd:PRK13513 58 VVTREQLENKAYRDVTDALKDVPGVVV---TGGGSTS---DISIRGMAAkytlilvdgkRVDTRSTRPnSDG-------S 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 208 GQPQLSLAPvsLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGVEGQLSPTSSQNNPKETHNLMVGGTA 287
Cdd:PRK13513 125 GIEQGWLPP--LAAIERIEVVRGPMSSLYGSDAMGGVINIITRKVQKEWHGSLRADATLQEDSKSGDIFQTNAYASGPLI 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 288 DNGFGTAL--LYSgTRGSDWRE--HSATRIDDLMLKSKYAPNKVHTFnsllqyydgeadmpgglsraDYDADRWQSTRpy 363
Cdd:PRK13513 203 DGLLGLKVsgLLS-HRSEDKIIdgYNEQRMRNGTATFSLTPDDNNEF--------------------DFEIGRYVQDR-- 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 364 DRFWGRRKLASLGYQFQPDSQHKFNIL--GFYTQTLRSGYLEQGKriTLSPrnywvrGIEPRY-------SQSFMIGPYA 434
Cdd:PRK13513 260 NSTPGRTLALNGTNSDTQYDRNNYAIThnGYYDFGNSTSYIQRDE--TRNP------SRQMKSvdtifntQTSFLLDDHT 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 435 HEVGVGYRYvnESTHEmryytatSSGQLPSGSSpYDRDTRSgteAHAWYLDDKIDIGN-WTITPGMRFEHIESYqnnaik 513
Cdd:PRK13513 332 LSLGGQYRY--EELYD-------KGNQLPSASD-LNKLTRW---SWALFAEDEWQMTNdFALTGGIRMDQDQNY------ 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 514 GTHEEvsynaplPALNVLYHLTDSWNL-------YANTEGSFGTVQYSQI-------GKAVQSGNVEPEKARTWELGTRY 579
Cdd:PRK13513 393 GTHWT-------PRLYGVWHLADQWTLkggvstgYRSPDLRQATDNWGQLtgggglpALILGNSDLKPEKSISQEIGILW 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 580 DDG-ALTAEMGLFLINFNNQ-------YDSNQTNDTVTAR------------GKTRHTGLETQARYDLgtltptLDNVSV 639
Cdd:PRK13513 466 DNQeNLNASVTLFNTDFKDKitevrncDTTNTDGQCVFNGinydfisdrinvDKANMRGVEATFNWDI------NQAWSL 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1465504975 640 YASYAYVNAEiREKGDTYGNQVPFSPKH--KGTLGVDYKP--GNWTfNLNSDFQSSQFADNANTVKesadgstgRIPGFM 715
Cdd:PRK13513 540 ATNYTFTQSE-QKSGAFAGQPLNQMPKHmaNATLNWQTTEdfATWI-RINYRGKTSEYLNRTSMGS--------GTPSYT 609
|
650 660 670
....*....|....*....|....*....|....*..
gi 1465504975 716 LWGARVAYDFgpqMADLNLAFGVKNIFDQDYFIRSYD 752
Cdd:PRK13513 610 FVDLGASYQL---TKELRLMGGVYNLLDKRVDIDVND 643
|
|
| STN |
pfam07660 |
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ... |
57-107 |
1.73e-05 |
|
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.
Pssm-ID: 429580 [Multi-domain] Cd Length: 51 Bit Score: 42.50 E-value: 1.73e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 1465504975 57 TLSVDASLTRGKQSNGLH-GDYDVESGLQQLLDGSGLQVKpLGNNSWTLEPA 107
Cdd:pfam07660 1 SILYDSDLVDGKQSVSLNvGNVTLEEALDQLLAGTGLSYE-IGGNTIVLRPK 51
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