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Conserved domains on  [gi|1490518948|gb|RLB38475|]
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FAD-binding protein [Deltaproteobacteria bacterium]

Protein Classification

FAD-dependent oxidoreductase( domain architecture ID 11482601)

FAD-dependent oxidoreductase similar to Comamonas testosteroni 3-oxo-5-alpha-steroid 4-dehydrogenase that catalyzes the elimination of hydrogens located at positions 4 and 5 and the introduction of double bonds into ring A

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK07121 PRK07121
FAD-binding protein;
12-539 0e+00

FAD-binding protein;


:

Pssm-ID: 180854 [Multi-domain]  Cd Length: 492  Bit Score: 569.52  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  12 PAEPPLVITKTDREAWDDEADAVVVGFGGAGACAALEASANGARVLVLDRFHG-GGATAISGGVFYAGGGTHIQSEAGAT 90
Cdd:PRK07121    2 STDIPRPVSAEDVTSWDDEADVVVVGFGAAGACAAIEAAAAGARVLVLERAAGaGGATALSGGVIYLGGGTAVQKAAGFE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  91 DDADEMFRYLSLEVKGVVAEETLRDFCDTSVDNLTWLEEHGVPFEASLCPYKTSYPTDDYYLYYSGNEGFSPYKEAAKPA 170
Cdd:PRK07121   82 DSPENMYAYLRVAVGPGVDEEKLRRYCEGSVEHFDWLEGLGVPFERSFFPEKTSYPPNDEGLYYSGNEKAWPFAEIAKPA 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 171 PRGHRAKGAGLPGES--FYEPLRASAHRAGIEVEYEARVTRLVIDSRNRVLGVEYRQikkgfwsslyrrlnqagvaivky 248
Cdd:PRK07121  162 PRGHRVQGPGDSGGGamLMDPLAKRAAALGVQIRYDTRATRLIVDDDGRVVGVEARR----------------------- 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 249 npkvaaklrkhcfqieadHSVLKRVRAINGVVLAAGGFIYNRDMVKEIAPKYRSGMPLGTASDNGSGILLGQSVGGKTDL 328
Cdd:PRK07121  219 ------------------YGETVAIRARKGVVLAAGGFAMNREMVARYAPAYAGGLPLGTTGDDGSGIRLGQSAGGATAH 280
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 329 MDRISAWRFINPPEAFAKGMIINQNGERYINEFMYGAAVGEAMVEHNDGVAILIINGELKKLAREQCKPGKAQWFqrapa 408
Cdd:PRK07121  281 MDQVFAWRFIYPPSALLRGILVNARGQRFVNEDTYGARIGQFILEQPGGTAYLIVDEALFEEARAQLRPQIDGRT----- 355
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 409 llnlwFNSKEAKTVDELAKVAKVPLETLRKTLDEYNDAADGKMADRFNKGSDRMHAMRNGPYFAINagIKSKRFPCPTLT 488
Cdd:PRK07121  356 -----PGAWKAETVEELARKLGIPPGGLQATVDAYNRAAAGGEDPPFHKQPEWLRPLDTGPFAAID--LSLGKAPTPGFT 428
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1490518948 489 LGGLVVDERTGQVKSEDGGVIPGLYAAGRNAVGVCSRQYVSGLSIADCVYS 539
Cdd:PRK07121  429 LGGLRVDEDTGEVLRADGAPIPGLYAAGRCASGIASNGYVSGLSLADCSFF 479
 
Name Accession Description Interval E-value
PRK07121 PRK07121
FAD-binding protein;
12-539 0e+00

FAD-binding protein;


Pssm-ID: 180854 [Multi-domain]  Cd Length: 492  Bit Score: 569.52  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  12 PAEPPLVITKTDREAWDDEADAVVVGFGGAGACAALEASANGARVLVLDRFHG-GGATAISGGVFYAGGGTHIQSEAGAT 90
Cdd:PRK07121    2 STDIPRPVSAEDVTSWDDEADVVVVGFGAAGACAAIEAAAAGARVLVLERAAGaGGATALSGGVIYLGGGTAVQKAAGFE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  91 DDADEMFRYLSLEVKGVVAEETLRDFCDTSVDNLTWLEEHGVPFEASLCPYKTSYPTDDYYLYYSGNEGFSPYKEAAKPA 170
Cdd:PRK07121   82 DSPENMYAYLRVAVGPGVDEEKLRRYCEGSVEHFDWLEGLGVPFERSFFPEKTSYPPNDEGLYYSGNEKAWPFAEIAKPA 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 171 PRGHRAKGAGLPGES--FYEPLRASAHRAGIEVEYEARVTRLVIDSRNRVLGVEYRQikkgfwsslyrrlnqagvaivky 248
Cdd:PRK07121  162 PRGHRVQGPGDSGGGamLMDPLAKRAAALGVQIRYDTRATRLIVDDDGRVVGVEARR----------------------- 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 249 npkvaaklrkhcfqieadHSVLKRVRAINGVVLAAGGFIYNRDMVKEIAPKYRSGMPLGTASDNGSGILLGQSVGGKTDL 328
Cdd:PRK07121  219 ------------------YGETVAIRARKGVVLAAGGFAMNREMVARYAPAYAGGLPLGTTGDDGSGIRLGQSAGGATAH 280
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 329 MDRISAWRFINPPEAFAKGMIINQNGERYINEFMYGAAVGEAMVEHNDGVAILIINGELKKLAREQCKPGKAQWFqrapa 408
Cdd:PRK07121  281 MDQVFAWRFIYPPSALLRGILVNARGQRFVNEDTYGARIGQFILEQPGGTAYLIVDEALFEEARAQLRPQIDGRT----- 355
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 409 llnlwFNSKEAKTVDELAKVAKVPLETLRKTLDEYNDAADGKMADRFNKGSDRMHAMRNGPYFAINagIKSKRFPCPTLT 488
Cdd:PRK07121  356 -----PGAWKAETVEELARKLGIPPGGLQATVDAYNRAAAGGEDPPFHKQPEWLRPLDTGPFAAID--LSLGKAPTPGFT 428
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1490518948 489 LGGLVVDERTGQVKSEDGGVIPGLYAAGRNAVGVCSRQYVSGLSIADCVYS 539
Cdd:PRK07121  429 LGGLRVDEDTGEVLRADGAPIPGLYAAGRCASGIASNGYVSGLSLADCSFF 479
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
47-539 5.20e-71

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 236.27  E-value: 5.20e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  47 LEASANGARVLVLDR-FHGGGATAISGGVFYAGGgTHIQSEAGaTDDADEMFRYLSLEVKGVVAEETLRDFCDTSVDNLT 125
Cdd:COG1053    20 LEAAEAGLKVLVLEKvPPRGGHTAAAQGGINAAG-TNVQKAAG-EDSPEEHFYDTVKGGDGLADQDLVEALAEEAPEAID 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 126 WLEEHGVPFEaslcpyktsyPTDDYYLYYSGnegfspykeaAKPAPRGHRAKGAGlpGESFYEPLRASAHRAGIEVEYEA 205
Cdd:COG1053    98 WLEAQGVPFS----------RTPDGRLPQFG----------GHSVGRTCYAGDGT--GHALLATLYQAALRLGVEIFTET 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 206 RVTRLVIDSrNRVLGVEYRQIKKGfwsslyrrlnqagvaivkynpkvaaklrkhcfqieadhsvLKRVRAiNGVVLAAGG 285
Cdd:COG1053   156 EVLDLIVDD-GRVVGVVARDRTGE----------------------------------------IVRIRA-KAVVLATGG 193
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 286 FIYNRDMVKEIAPKYRSGMPLGTASDNGSGILLGQSVGGKTDLMDRISAWRFINPPE---------AFAKGMIINQNGER 356
Cdd:COG1053   194 FGRNYEMRAEYLPEAEGALSTNAPGNTGDGIAMALRAGAALADMEFVQFHPTGLPGDgglisegarGKPGGILVNKEGER 273
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 357 YINEFMYGAAVGEAMVEHNDGVAILIINgelkklareqckpgkaqwfQRAPALLNLWFNS---KEAKTVDELAKVAKVPL 433
Cdd:COG1053   274 FMNEYAPRDVVSRAILEEIDEPAYLVLD-------------------LRHRRRLEEYLEAgylVKADTIEELAAKLGIDA 334
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 434 ETLRKTLDEYNDAADGKMADRfnkgSDRMHAMRNGPYFAInagiksKRFPCPTLTLGGLVVDERtGQVKSEDGGVIPGLY 513
Cdd:COG1053   335 AELAATVARYNAAAKAGVDPR----GTCLGPIKEGPFYAI------PVRPGVHYTMGGLRVDAD-ARVLDADGTPIPGLY 403
                         490       500
                  ....*....|....*....|....*.
gi 1490518948 514 AAGRNAVGVCSRQYVSGLSIADCVYS 539
Cdd:COG1053   404 AAGEAAGSVHGANRLGGNSLGDALVF 429
flavo_cyto_c TIGR01813
flavocytochrome c; This model describes a family of redox proteins related to the succinate ...
32-537 1.71e-33

flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]


Pssm-ID: 273816 [Multi-domain]  Cd Length: 439  Bit Score: 133.24  E-value: 1.71e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  32 DAVVVGFGGAGACAALEASANGAR-VLVLDRFHG-GGATAISGGVFyAGGGTHIQSEAGATDDADEMFRYLSLEVKGVVA 109
Cdd:TIGR01813   1 DVVVVGSGFAGLSAALSAKKAGAAnVVLLEKMPViGGNSAIAAGGM-NAAGTDQQKALGIEDSPELFIKDTLKGGRGIND 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 110 EETLRDFCDTSVDNLTWLEEhGVPFeaslcpyktsYPTDdyyLYYSGneGFSpykeaakpAPRGHRAKGAGLPGESFYEP 189
Cdd:TIGR01813  80 PELVRILAEESKDAVDWLQD-GVGA----------RLDD---LIQLG--GHS--------VPRAHRPTGGAASGAEIVQT 135
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 190 LRASAHRAGIEVEYEARVTRLVIDSRNRVLGVEYRQIKKGFwsslyrrlnqagvaivKYnpkVAAKlrkhcfqieadhsv 269
Cdd:TIGR01813 136 LYKKAKKEGIDTRLNSKVEDLIQDDQGSVVGVVVKGKGKGI----------------YI---KAAK-------------- 182
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 270 lkrvrainGVVLAAGGFIYNRDMVKEIAPKYRSGMPLGTASDNGSGILLGQSVGGKTDLMDRISA--WRFINPP-----E 342
Cdd:TIGR01813 183 --------AVVLATGGFGSNKEMIAKYDPTLKHLGSTNQPGATGDGLLMAEKIGAALVDMDYIQAhpTASPDEGgflisE 254
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 343 AFA--KGMIINQNGERYINEFMYGAAVGEAMVEHNDGVAILIINGELKKlareqckpgKAQWFQRAPALLNLWfnskEAK 420
Cdd:TIGR01813 255 AVRgyGAILVNKTGERFMNELATRDKVSDAILAQPGKDAYLIFDDDVYK---------KAKMVDNYYRLGVAY----KGD 321
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 421 TVDELAKVAKVPLETLRKTLDEYNDAADGKMADRFNKGSDRMHAMRNGPYFAInagiksKRFPCPTLTLGGLVVDERTgQ 500
Cdd:TIGR01813 322 SLEELAKQFGIPAAALKQTIKDYNGYVASGKDTPFGRPMDMPTDLSKAPYYAI------KVTPGVHHTMGGVKINTKA-E 394
                         490       500       510
                  ....*....|....*....|....*....|....*..
gi 1490518948 501 VKSEDGGVIPGLYAAGRNAVGVCSRQYVSGLSIADCV 537
Cdd:TIGR01813 395 VLDANGKPIPGLFAAGEVTGGVHGANRLGGNAIADCI 431
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
47-516 1.24e-19

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 91.58  E-value: 1.24e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  47 LEASANGARVLVLDR-FHGGGATAISGGVFYAGGgthiQSEAGATDDADEMFRYLSLEVKGVVAEETLRDFCDTSVDNLT 125
Cdd:pfam00890  16 LAAAEAGLKVAVVEKgQPFGGATAWSSGGIDALG----NPPQGGIDSPELHPTDTLKGLDELADHPYVEAFVEAAPEAVD 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 126 WLEEHGVPFEaslcpyktsyPTDDYYLYYSGNEGFSPYKEAAKPAPRGHRAKGaglPGESFYEPLRASAHRAGIEVEYEA 205
Cdd:pfam00890  92 WLEALGVPFS----------RTEDGHLDLRPLGGLSATWRTPHDAADRRRGLG---TGHALLARLLEGLRKAGVDFQPRT 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 206 RVTRLVIDSrNRVLGVEYRQIKKGfwsslyrrlnqagvaivkynpkvaaklrkhcfqieadhsVLKRVRAINGVVLAAGG 285
Cdd:pfam00890 159 AADDLIVED-GRVTGAVVENRRNG---------------------------------------REVRIRAIAAVLLATGG 198
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 286 FiyNRDmVKEIAPKYRSGMPLGTASDNGSGILLGQSVGGK--TDLMDRI----SAWRFINPP-----EAFAK--GMIINQ 352
Cdd:pfam00890 199 F--GRL-AELLLPAAGYADTTNPPANTGDGLALALRAGAAltDDLMEFVqfhpTSLVGIRLGsglliEALRGegGILVNK 275
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 353 NGERYINEFMYGAAVGEAMVEHndgvailiingelkklarEQCKPGKAqwfqrapallNLWFNSKeaktvdelakvAKVP 432
Cdd:pfam00890 276 DGRRFMNELASRDVVSRAITRN------------------EIDEGRGA----------NVYLDAS-----------GSLD 316
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 433 LETLRKTLDEYNDAA----DGKMADRFNkgsdrmhamrngPYFAinagikskrfPCPtLTLGGLVVDErTGQVKSEDGGV 508
Cdd:pfam00890 317 AEGLEATLPAINEEAifglDVDPYDRPI------------PVFP----------AQH-YTMGGVRTDE-NGRVLDADGQP 372

                  ....*...
gi 1490518948 509 IPGLYAAG 516
Cdd:pfam00890 373 IPGLYAAG 380
 
Name Accession Description Interval E-value
PRK07121 PRK07121
FAD-binding protein;
12-539 0e+00

FAD-binding protein;


Pssm-ID: 180854 [Multi-domain]  Cd Length: 492  Bit Score: 569.52  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  12 PAEPPLVITKTDREAWDDEADAVVVGFGGAGACAALEASANGARVLVLDRFHG-GGATAISGGVFYAGGGTHIQSEAGAT 90
Cdd:PRK07121    2 STDIPRPVSAEDVTSWDDEADVVVVGFGAAGACAAIEAAAAGARVLVLERAAGaGGATALSGGVIYLGGGTAVQKAAGFE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  91 DDADEMFRYLSLEVKGVVAEETLRDFCDTSVDNLTWLEEHGVPFEASLCPYKTSYPTDDYYLYYSGNEGFSPYKEAAKPA 170
Cdd:PRK07121   82 DSPENMYAYLRVAVGPGVDEEKLRRYCEGSVEHFDWLEGLGVPFERSFFPEKTSYPPNDEGLYYSGNEKAWPFAEIAKPA 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 171 PRGHRAKGAGLPGES--FYEPLRASAHRAGIEVEYEARVTRLVIDSRNRVLGVEYRQikkgfwsslyrrlnqagvaivky 248
Cdd:PRK07121  162 PRGHRVQGPGDSGGGamLMDPLAKRAAALGVQIRYDTRATRLIVDDDGRVVGVEARR----------------------- 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 249 npkvaaklrkhcfqieadHSVLKRVRAINGVVLAAGGFIYNRDMVKEIAPKYRSGMPLGTASDNGSGILLGQSVGGKTDL 328
Cdd:PRK07121  219 ------------------YGETVAIRARKGVVLAAGGFAMNREMVARYAPAYAGGLPLGTTGDDGSGIRLGQSAGGATAH 280
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 329 MDRISAWRFINPPEAFAKGMIINQNGERYINEFMYGAAVGEAMVEHNDGVAILIINGELKKLAREQCKPGKAQWFqrapa 408
Cdd:PRK07121  281 MDQVFAWRFIYPPSALLRGILVNARGQRFVNEDTYGARIGQFILEQPGGTAYLIVDEALFEEARAQLRPQIDGRT----- 355
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 409 llnlwFNSKEAKTVDELAKVAKVPLETLRKTLDEYNDAADGKMADRFNKGSDRMHAMRNGPYFAINagIKSKRFPCPTLT 488
Cdd:PRK07121  356 -----PGAWKAETVEELARKLGIPPGGLQATVDAYNRAAAGGEDPPFHKQPEWLRPLDTGPFAAID--LSLGKAPTPGFT 428
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1490518948 489 LGGLVVDERTGQVKSEDGGVIPGLYAAGRNAVGVCSRQYVSGLSIADCVYS 539
Cdd:PRK07121  429 LGGLRVDEDTGEVLRADGAPIPGLYAAGRCASGIASNGYVSGLSLADCSFF 479
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
47-539 5.20e-71

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 236.27  E-value: 5.20e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  47 LEASANGARVLVLDR-FHGGGATAISGGVFYAGGgTHIQSEAGaTDDADEMFRYLSLEVKGVVAEETLRDFCDTSVDNLT 125
Cdd:COG1053    20 LEAAEAGLKVLVLEKvPPRGGHTAAAQGGINAAG-TNVQKAAG-EDSPEEHFYDTVKGGDGLADQDLVEALAEEAPEAID 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 126 WLEEHGVPFEaslcpyktsyPTDDYYLYYSGnegfspykeaAKPAPRGHRAKGAGlpGESFYEPLRASAHRAGIEVEYEA 205
Cdd:COG1053    98 WLEAQGVPFS----------RTPDGRLPQFG----------GHSVGRTCYAGDGT--GHALLATLYQAALRLGVEIFTET 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 206 RVTRLVIDSrNRVLGVEYRQIKKGfwsslyrrlnqagvaivkynpkvaaklrkhcfqieadhsvLKRVRAiNGVVLAAGG 285
Cdd:COG1053   156 EVLDLIVDD-GRVVGVVARDRTGE----------------------------------------IVRIRA-KAVVLATGG 193
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 286 FIYNRDMVKEIAPKYRSGMPLGTASDNGSGILLGQSVGGKTDLMDRISAWRFINPPE---------AFAKGMIINQNGER 356
Cdd:COG1053   194 FGRNYEMRAEYLPEAEGALSTNAPGNTGDGIAMALRAGAALADMEFVQFHPTGLPGDgglisegarGKPGGILVNKEGER 273
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 357 YINEFMYGAAVGEAMVEHNDGVAILIINgelkklareqckpgkaqwfQRAPALLNLWFNS---KEAKTVDELAKVAKVPL 433
Cdd:COG1053   274 FMNEYAPRDVVSRAILEEIDEPAYLVLD-------------------LRHRRRLEEYLEAgylVKADTIEELAAKLGIDA 334
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 434 ETLRKTLDEYNDAADGKMADRfnkgSDRMHAMRNGPYFAInagiksKRFPCPTLTLGGLVVDERtGQVKSEDGGVIPGLY 513
Cdd:COG1053   335 AELAATVARYNAAAKAGVDPR----GTCLGPIKEGPFYAI------PVRPGVHYTMGGLRVDAD-ARVLDADGTPIPGLY 403
                         490       500
                  ....*....|....*....|....*.
gi 1490518948 514 AAGRNAVGVCSRQYVSGLSIADCVYS 539
Cdd:COG1053   404 AAGEAAGSVHGANRLGGNSLGDALVF 429
PRK12835 PRK12835
3-ketosteroid-delta-1-dehydrogenase; Reviewed
20-527 2.57e-39

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 237221 [Multi-domain]  Cd Length: 584  Bit Score: 152.65  E-value: 2.57e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  20 TKTDREAWDDEADAVVVGFGGAGACAALEASANGARVLVLDRF-HGGGATAISGGVFYAGGGThIQSEAGATDDADEMFR 98
Cdd:PRK12835    1 MSVDEQNFDREVDVLVVGSGGGGMTAALTAAARGLDTLVVEKSaHFGGSTALSGGGIWVPGAP-AQRREGYVPDPEDVRR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  99 YLSLEVKGVVAEETLRDFCDTSVDNLTWLEEhgvpfeasLCPYKTSYPTDDYYLYYSGNEGFSPYKEAAKPAPRGHRAKG 178
Cdd:PRK12835   80 YLKQITGGLVSAARLRAYVDAAPQMMEFLEN--------LSPWLEFVWKPGYADYYPELPGGSPLGSTINVPPIDLRKLG 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 179 aglPGESFYEPLRASA------------HRAGIEVEYEARVTRLVID---SRNRVLGVEYRQIKKGFWSSLYRRLNQAGV 243
Cdd:PRK12835  152 ---EDEQHLLPPLALApkgiwftpkdlrLFYMVRQTWAGKAVLLKLIwrmVRARVFGRRMAAIGQSLVARLRLALKDAGV 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 244 A----------IVKYNPKVAAKLrkhcfqIEADHSVLkRVRAINGVVLAAGGFIYNRDMVKEIAPKY-RSGMPLGTASDN 312
Cdd:PRK12835  229 PlwldspmtelITDPDGAVVGAV------VEREGRTL-RIGARRGVILATGGFDHDMDWRKEYLPELeRKDWSFGNPANT 301
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 313 GSGILLGQSVGGKTDLMDriSAWRF--INPPEAFAKGM----------IINQNGERYINEFMYGAAVGEAMVE-HNDGV- 378
Cdd:PRK12835  302 GDGIRAGEKVGAATDLLD--EAWWFpaICWPDGRMQFMlnermmpaqfIVNGAGKRFINEAAPYMDFVHAMIAgQRSGVg 379
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 379 ---AILIINGELK-KLAREQCKPGKAQWFQRAPALLNL---WFNS---KEAKTVDELAKVAKVPLETLRKTLDEYNDAAD 448
Cdd:PRK12835  380 hipCWLVTDIRSFsRYVFGGHLPIPKIPFAPVPTGRKFpqaWLESgvvKKADTWDELAAKIGVPAENLRATAERFNGLAR 459
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 449 GKMADRFNKGS---DR-----------MHAMRNGPYFAInagikskRFPCPTL-TLGGLVVDERTgQVKSEDGGVIPGLY 513
Cdd:PRK12835  460 KGHDDDFNRGDsayDNyygdptlpnpnLDPLGKPPYYAF-------RIELGDLgTSGGLRTDEHA-RVLREDDSVIPGLY 531
                         570
                  ....*....|....
gi 1490518948 514 AAGRNAVGVCSRQY 527
Cdd:PRK12835  532 AVGNTSASVMGRSY 545
flavo_cyto_c TIGR01813
flavocytochrome c; This model describes a family of redox proteins related to the succinate ...
32-537 1.71e-33

flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]


Pssm-ID: 273816 [Multi-domain]  Cd Length: 439  Bit Score: 133.24  E-value: 1.71e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  32 DAVVVGFGGAGACAALEASANGAR-VLVLDRFHG-GGATAISGGVFyAGGGTHIQSEAGATDDADEMFRYLSLEVKGVVA 109
Cdd:TIGR01813   1 DVVVVGSGFAGLSAALSAKKAGAAnVVLLEKMPViGGNSAIAAGGM-NAAGTDQQKALGIEDSPELFIKDTLKGGRGIND 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 110 EETLRDFCDTSVDNLTWLEEhGVPFeaslcpyktsYPTDdyyLYYSGneGFSpykeaakpAPRGHRAKGAGLPGESFYEP 189
Cdd:TIGR01813  80 PELVRILAEESKDAVDWLQD-GVGA----------RLDD---LIQLG--GHS--------VPRAHRPTGGAASGAEIVQT 135
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 190 LRASAHRAGIEVEYEARVTRLVIDSRNRVLGVEYRQIKKGFwsslyrrlnqagvaivKYnpkVAAKlrkhcfqieadhsv 269
Cdd:TIGR01813 136 LYKKAKKEGIDTRLNSKVEDLIQDDQGSVVGVVVKGKGKGI----------------YI---KAAK-------------- 182
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 270 lkrvrainGVVLAAGGFIYNRDMVKEIAPKYRSGMPLGTASDNGSGILLGQSVGGKTDLMDRISA--WRFINPP-----E 342
Cdd:TIGR01813 183 --------AVVLATGGFGSNKEMIAKYDPTLKHLGSTNQPGATGDGLLMAEKIGAALVDMDYIQAhpTASPDEGgflisE 254
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 343 AFA--KGMIINQNGERYINEFMYGAAVGEAMVEHNDGVAILIINGELKKlareqckpgKAQWFQRAPALLNLWfnskEAK 420
Cdd:TIGR01813 255 AVRgyGAILVNKTGERFMNELATRDKVSDAILAQPGKDAYLIFDDDVYK---------KAKMVDNYYRLGVAY----KGD 321
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 421 TVDELAKVAKVPLETLRKTLDEYNDAADGKMADRFNKGSDRMHAMRNGPYFAInagiksKRFPCPTLTLGGLVVDERTgQ 500
Cdd:TIGR01813 322 SLEELAKQFGIPAAALKQTIKDYNGYVASGKDTPFGRPMDMPTDLSKAPYYAI------KVTPGVHHTMGGVKINTKA-E 394
                         490       500       510
                  ....*....|....*....|....*....|....*..
gi 1490518948 501 VKSEDGGVIPGLYAAGRNAVGVCSRQYVSGLSIADCV 537
Cdd:TIGR01813 395 VLDANGKPIPGLFAAGEVTGGVHGANRLGGNAIADCI 431
PRK06481 PRK06481
flavocytochrome c;
22-537 4.09e-30

flavocytochrome c;


Pssm-ID: 180584 [Multi-domain]  Cd Length: 506  Bit Score: 124.56  E-value: 4.09e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  22 TDREAWDDEADAVVVGFGGAGACAALEASANGARVLVLDRF--HGGGATAISGGVfyAGGGTHIQSEAGATDDADEMFRY 99
Cdd:PRK06481   53 TDPSELKDKYDIVIVGAGGAGMSAAIEAKDAGMNPVILEKMpvAGGNTMKASSGM--NASETKFQKAQGIADSNDKFYEE 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 100 LSLEVKGVVAEETLRDFCDTSVDNLTWLEEHGVPFEAslcpyktsyptddyyLYYSGneGFSpykeaakpAPRGHRAKGA 179
Cdd:PRK06481  131 TLKGGGGTNDKALLRYFVDNSASAIDWLDSMGIKLDN---------------LTITG--GMS--------EKRTHRPHDG 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 180 GLPGESFYEPLRASAHRAGIEVEYEARVTRLViDSRNRVLGVEYRqikkgfwsslyrrLNQagvaivKYNPKVAAKlrkh 259
Cdd:PRK06481  186 SAVGGYLVDGLLKNVQERKIPLFVNADVTKIT-EKDGKVTGVKVK-------------ING------KETKTISSK---- 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 260 cfqieadhsvlkrvrainGVVLAAGGFIYNRDMVKEIAPKYRSGMPLGTASDNGSGILLGQSVGGKTDLMDRISAWRFIN 339
Cdd:PRK06481  242 ------------------AVVVTTGGFGANKDMIAKYRPDLKGYVTTNQEGSTGDGIKMIEKLGGTTVDMDQIQIHPTVQ 303
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 340 PPEAFAKG--------MIINQNGERYINEFMYGAAVGEAMVEHNDGVAILIINGELKKLAReqckpGKAQWFQRAPAlln 411
Cdd:PRK06481  304 QSKSYLIGeavrgegaILVNQKGKRFGNELDTRDKVSAAINKLPEKYAYVVFDSGVKDRVK-----AIAQYEEKGFV--- 375
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 412 lwfnsKEAKTVDELAKVAKVPLETLRKTLDEYNDAADGKMADRFNKGSDRMHAMRNGPYFAINAGikskrfPCPTLTLGG 491
Cdd:PRK06481  376 -----EEGKTIDELAKKINVPAETLTKTLDTWNKAVKNKKDEAFGRTTGMDNDLSTGPYYAIKIA------PGIHYTMGG 444
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|....*.
gi 1490518948 492 LVVDERTgQVKSEDGGVIPGLYAAGRNAVGVCSRQYVSGLSIADCV 537
Cdd:PRK06481  445 VKINTNT-EVLKKDGSPITGLYAAGEVTGGLHGENRIGGNSVADII 489
PRK12844 PRK12844
3-ketosteroid-delta-1-dehydrogenase; Reviewed
27-534 5.81e-28

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 183787 [Multi-domain]  Cd Length: 557  Bit Score: 118.70  E-value: 5.81e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  27 WDDEADAVVVGFGGAGACAALEASANGARVLVLDRFHG-GGATAISGGVFYAGGgTHIQSEAGATDDADEMFRYLSLEVK 105
Cdd:PRK12844    3 WDETYDVVVVGSGGGGMCAALAAADSGLEPLIVEKQDKvGGSTAMSGGVLWLPN-NPLMKAAGVPDSHEDALAYLDAVVG 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 106 GV---VAEETLRDFCDTSVDNLTWLEEHGVPFEAslcpyktsypTDDYYLYYSGNEGFSPYKEAAKPAPRGHRAKGAGLP 182
Cdd:PRK12844   82 DQgpaSSPERREAYLRAGPAMVSFLEHQGMRFAR----------CEGWSDYYPDLPGGEARGRSLEAKPFDARKLGPWFD 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 183 --GESFYEPLRASAHragiEVEYE--------ARVTRLVIDSRNRVLGVEYR-QIKKGFWSSLYRRLNQ----AGVAIVK 247
Cdd:PRK12844  152 rlNPPMATPPGTVVM----TDEYKwlqlikrtPRGMRTAARVGARTLAARIRgQKLLTNGAALIGRMLEaalaAGVPLWT 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 248 YNPK---VAAKLRKHCFQIEAD-HSVlkRVRAINGVVLAAGGFIYNRDMVKEIAPKYRSG-MPLGTASDNGSGILLGQSV 322
Cdd:PRK12844  228 NTPLtelIVEDGRVVGVVVVRDgREV--LIRARRGVLLASGGFGHNAEMRKRYQPQPNSGdWTNANPGDTGEVIEAAMRL 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 323 GGKTDLMDriSAWRFinpPEAFAKG-----------------MIINQNGERYINEFMYGAAVGEAMVEHNDGVAILIING 385
Cdd:PRK12844  306 GAALDLMD--EAWWV---PGAPLPNggprpymhnserskpgsIIVDRAGRRFVNEAGSYMEVGRAMYAQDAVPAWMIMDS 380
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 386 ELKKlareqckpgKAQWFQRAPA-LLNLWFNS---KEAKTVDELAKVAKVPLETLRKTLDEYND-AADGKMADrFNKGS- 459
Cdd:PRK12844  381 RYRK---------RYLFGTIPPGpTPQEWLDSgymKRADTIEELAGKTGIDPAGLAATVERFNGfAATGTDPD-FHRGEs 450
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 460 --DRMHA------------MRNGPYFAINAgikskrFPCPTLTLGGLVVDERtGQVKSEDGGVIPGLYAAGRNAVGVCSR 525
Cdd:PRK12844  451 ayDRYYGdptnkpnpslgpLDKPPFYAVRM------VPGDVGTSGGLLTDEH-ARVLREDGSVIPGLYATGNCTASVMGR 523
                         570
                  ....*....|
gi 1490518948 526 QYV-SGLSIA 534
Cdd:PRK12844  524 TYPgAGASIG 533
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
29-527 1.12e-26

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 114.75  E-value: 1.12e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  29 DEADAVVVGFGGAGACAALEASANGARVLVLDRF-HGGGATAISGGVFYAGGgTHIQSEAGATDDADEMFRYLSLEVKGV 107
Cdd:PRK07843    6 QEYDVVVVGSGAAGMVAALTAAHRGLSTVVVEKApHYGGSTARSGGGVWIPN-NEVLKRAGVPDTPEAARTYLHSIVGDV 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 108 VAEETLRDFCDTSVDNLTWLEEHGvPFEASLCPyktSYPtdDYYLYYSGN--EGFS--------------------PYKE 165
Cdd:PRK07843   85 VPPERIDAYLDRGPEMLSFVLAHS-PLKLCWVP---GYS--DYYPEAPGGrpGGRSiepkpfdarklgadlaglepPYGK 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 166 ---------------------------AAKPAPRGHRAKGAGLP----GESFYEPLRASAHRAGIEVEYEARVTRLVIDs 214
Cdd:PRK07843  159 vplnmvvmqqdyvwlnllkrhprgvlrALKVGARTLWAKATGKNllgmGQALAAGLRIGLQRAGVPVLLNTPLTDLYVE- 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 215 RNRVLGVeyrqikkgfwsslyrRLNQAGVAIVkynpkvaaklrkhcfqieadhsvlkrVRAINGVVLAAGGFIYNRDMVK 294
Cdd:PRK07843  238 DGRVTGV---------------HAAESGEPQL--------------------------IRARRGVILASGGFEHNEQMRA 276
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 295 eiapKYRSGmPLGT------ASDNGSGILLGQSVGGKTDLMDriSAW--RFINPPEA--FA-------KGMIINQNGERY 357
Cdd:PRK07843  277 ----KYQRA-PIGTewtvgaKANTGDGILAGEKLGAALDLMD--DAWwgPTIPLPGGpwFAlsernlpGSIIVNMSGKRF 349
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 358 INE---------FMYGAAVGEAMVEHNDGVAILIINGELKK------LAREQCKPGKaqWFQRAPALlnlwfnskEAKTV 422
Cdd:PRK07843  350 MNEsapyveavhHMYGGEYGQGPGPGENIPAWLVFDQRYRDrylfagLQPRQPIPSR--WLESGVIV--------KADTL 419
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 423 DELAKVAKVPLETLRKTLDEYND-AADGKMADrFNKGS---DR------------MHAMRNGPYFAInagiksKRFPCPT 486
Cdd:PRK07843  420 AELAAKIGVPADALTATVQRFNGfARSGVDED-FHRGEsayDRyygdptnkpnpnLGELSHAPFYAA------KMVPGDL 492
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|.
gi 1490518948 487 LTLGGLVVDERtGQVKSEDGGVIPGLYAAGRNAVGVCSRQY 527
Cdd:PRK07843  493 GTKGGLRTDVR-GRVLRDDGSVIEGLYAAGNVSAPVMGHTY 532
PRK12845 PRK12845
3-ketosteroid-delta-1-dehydrogenase; Reviewed
47-519 9.58e-22

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 237226 [Multi-domain]  Cd Length: 564  Bit Score: 99.46  E-value: 9.58e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  47 LEASANGARVLVLDRF-HGGGATAISGGVFYAGGgTHIQSEAGATDDADEMFRYLSLEVKGVVAEETLRDFCD------- 118
Cdd:PRK12845   32 LAAHELGLSVLIVEKSsYVGGSTARSGGAFWLPA-SPVLDEAGAGDTLERARTYLDSVVGGSAPAERSAAFLDngsatvd 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 119 ----TSVDNLTWLEEHG------------------VPFEAS--------LCP--YKTSYPTD----DY-YLYYSGNEGFS 161
Cdd:PRK12845  111 mlrrTTPMRFFWARGYSdyhpeqpggsaagrtcecRPFDTAvlgeyrprLRPgvMEVSIPMPvtgaDYrWLNLMARVPRK 190
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 162 PYKEAAKPAPRG------HRAKGAGlpGESFYEPLRASAHRAGIEVEYEARVTRLVIDSrNRVLGVeyrqikkgfwssly 235
Cdd:PRK12845  191 ALPRIAKRLAQGvgglalGRRYAAG--GQALAAGLFAGVLRAGIPIWTETSLVRLTDDG-GRVTGA-------------- 253
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 236 rRLNQAGVAIVkynpkvaaklrkhcfqieadhsvlkrVRAINGVVLAAGGFIYNRDMVKeiapKYRS-----GMPLGTAS 310
Cdd:PRK12845  254 -VVDHRGREVT--------------------------VTARRGVVLAAGGFDHDMEMRW----KFQSeslgeHASLGAEG 302
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 311 DNGSGILLGQSVGGKTDLMDRisAWRFinPPEAFAKG---------------MIINQNGERYINEFMYGAAVGEAMVE-H 374
Cdd:PRK12845  303 NTGDAIRIAQDLGAAIGLMDQ--AWWF--PAVAPLPGgapavmlaerslpgsLIVDQTGRRFVNEATDYMSFGQRVLErE 378
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 375 NDGVAI----LIINGELKK---LAreqckpgkAQWFQRAPaLLNLWFNSKEAKTVDELAKVAK---VPLETLRKTLDEYN 444
Cdd:PRK12845  379 RAGDPVesmwIVFDQQYRNsyvFA--------AELFPRMP-IPQAWYDAGIAHRADSLADLARkigVPVDTFVATMRRFN 449
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 445 DAADGKMADRFNKGS---DR------------MHAMRNGPYFAInagiksKRFPCPTLTLGGLVVDERtGQVKSEDGGVI 509
Cdd:PRK12845  450 EMAAAGVDSDFGRGRsayDRyygdptvtpnpnLRPLDKGPFYAV------KMVLSDLGTCGGLRADER-ARVLREDGSVI 522
                         570
                  ....*....|
gi 1490518948 510 PGLYAAGRNA 519
Cdd:PRK12845  523 DGLYAIGNTA 532
PRK12843 PRK12843
FAD-dependent oxidoreductase;
25-519 1.90e-21

FAD-dependent oxidoreductase;


Pssm-ID: 237225 [Multi-domain]  Cd Length: 578  Bit Score: 98.66  E-value: 1.90e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  25 EAWDDEADAVVVGFGGAGACAALEASANGARVLVLDRF-HGGGATAISGGVFYAGGgTHIQSEAGATDDADEMFRYLsle 103
Cdd:PRK12843   11 ERWDAEFDVIVIGAGAAGMSAALFAAIAGLKVLLVERTeYVGGTTATSAGTTWIPG-TRHGLAVGPDDSLEAARTYL--- 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 104 vKGVVAEET---LRD-FCDTSVDNLTWLEEH-GVPFEASlcpykTSYPTddyylYYSGNEGFSPYKEAAKPAPRGHRAKG 178
Cdd:PRK12843   87 -DALVGDRSpeeLRDaFLASGPRAIAFLEANsEVKFRAY-----ASHPD-----YESDLPGATLRGRALEPLPFDGRKLG 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 179 AGL-----PGESF-------------------YEPLRASAHRAGIEVEY------EARVTRLVidSRNRVLGveyrqikk 228
Cdd:PRK12843  156 ADFalirpPIPEFtvlggmmvdrtdvghllalTKSWRAFRHAVRLLARYardrisYARGTRLV--MGNALIG-------- 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 229 gfwsSLYRRLNQAGVAIVkynpkVAAKLRKhcfqIEADH-----------SVLKRVRAINGVVLAAGGFIYNRDMVKEIA 297
Cdd:PRK12843  226 ----RLLYSLRARGVRIL-----TQTDVES----LETDHgrvigatvvqgGVRRRIRARGGVVLATGGFNRHPQLRRELL 292
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 298 PKYRSGMPLGTASDNGSGILLGQSVGGKTDLMDR-------ISAWRFINPPEAF--------AK-GMI-INQNGERYINE 360
Cdd:PRK12843  293 PAAVARYSPGAPGHTGAAIDLALDAGARYGRGLLsnafwapVSVRRRADGSTAVfphfyldrGKpGTIaVNQQGRRFVNE 372
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 361 FMYGAAVGEAMVEHNDGV----AILIINGE-LKKLAREQCKPGKAqwfQRAPALLNLWFNskEAKTVDELAKVAKVPLET 435
Cdd:PRK12843  373 STSYHLFGTAMFAAGKTSpgipAYLITDAEfLRKYGLGMVRPGGR---GLAPFLRDGYLT--VASTLDELAPKLGIDPAA 447
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 436 LRKTLDEYN-DAADGKMADrFNKGS---DRM--HAMR----------NGPYFAInagiksKRFPCPTLTLGGLVVDErTG 499
Cdd:PRK12843  448 LAATVQRHNqYARTGIDPD-FGRGAtayQRMngDAMIgpnpnlgpieTAPFYAV------RLYPGDIGAATGLVTDA-SA 519
                         570       580
                  ....*....|....*....|
gi 1490518948 500 QVKSEDGGVIPGLYAAGRNA 519
Cdd:PRK12843  520 RVLNADGQPISGLYACGNDM 539
PRK12842 PRK12842
putative succinate dehydrogenase; Reviewed
28-516 8.56e-21

putative succinate dehydrogenase; Reviewed


Pssm-ID: 237224 [Multi-domain]  Cd Length: 574  Bit Score: 96.69  E-value: 8.56e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  28 DDEADAVVVGFGGAGACAALEASANGARVLVLDR-FHGGGATAISGGVFYAGGGTHiQSEAGATDDADEMFRYLSLEVKG 106
Cdd:PRK12842    7 ELTCDVLVIGSGAGGLSAAITARKLGLDVVVLEKePVFGGTTAFSGGVLWIPGNPH-AREAGVADSREAARTYLKHETGA 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 107 VVAEETLRDFCDTSVDNLTWLEEHG-VPFEASLcpyktsYPTddyylYYSGNEGFSPYKEAAKPAPrgHRAKGAGLPGES 185
Cdd:PRK12842   86 FFDAAAVEAFLDNGPEMVEFFERETeVKFVPTL------YPD-----YHPDAPGGVDIGRSILAAP--YDIRGLGKDMAR 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 186 FYEPLRASA------HRAGIEVEYEARVTRlvidSRNRVLGVEYRQIKKGFWSSLYRRlnqaGVAIVKYNpKVAAKLRKH 259
Cdd:PRK12842  153 LRPPLKTITfigmmfNSSNADLKHFFNATR----SLTSFIYVAKRLATHLKDLALYRR----GTQVTSGN-ALAARLAKS 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 260 CFQI---------------EADHSV---------LKRVRAINGVVLAAGGFIYNRDMVKEIAPKYRSGMP---LGTASDN 312
Cdd:PRK12842  224 ALDLgipiltgtparelltEGGRVVgarvidaggERRITARRGVVLACGGFSHDLARIARAYPHLARGGEhlsPVPAGNT 303
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 313 GSGILLGQSVGGKTDL-MDRISAW-----------RFINPP---EAFAKGMI-INQNGERYINEFMYGAAVGEAMVEHND 376
Cdd:PRK12842  304 GDGIRLAEAVGGAVDIrFPDAAAWmpvskvplgggRTGVFPhllDRYKPGVIgVLRNGKRFTNESNSYHDVGAAMIRACE 383
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 377 GV----AILIINGE-LKKLAREQCKPgkaqwfqrAPALLNLWFNS---KEAKTVDELAKVAKVPLETLRKTLDEYN---- 444
Cdd:PRK12842  384 GQketaMWLICDRAtLRKYGLGYAKP--------APMPVGPLLRNgylIKGDTLAELAGKAGIDAAGLEATVRRYNegav 455
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 445 ---DAADGKMADRFNK-GSDRMHA-------MRNGPYFAInagiksKRFPCPTLTLGGLVVDeRTGQVKSEDGGVIPGLY 513
Cdd:PRK12842  456 kgiDPAFGRGSTSFNRyLGDPDHKpnpcvapIGSGPFYAV------KVIMGDLGTFDGLRTD-VTGEVLDADGTPIAGLY 528

                  ...
gi 1490518948 514 AAG 516
Cdd:PRK12842  529 AVG 531
PRK12837 PRK12837
FAD-binding protein;
26-530 3.60e-20

FAD-binding protein;


Pssm-ID: 237222 [Multi-domain]  Cd Length: 513  Bit Score: 94.12  E-value: 3.60e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  26 AWDDEADaVVVGFGGAGACAALEASANGARVLVL---DRFhgGGATAISGGvfyagGGT-----HIQSEAGATDDADEMF 97
Cdd:PRK12837    3 AWDEEVD-VLVAGSGGGVAGAYTAAREGLSVALVeatDKF--GGTTAYSGG-----GGMwfpcnPVLRRAGTDDTIEDAL 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  98 RYLslevKGVVAEETLRDFCDTSV----DNLTWLE--EHgvpFEASLCPYKtsyptdDYYLYYSGNEGFSPYKEAAKPAP 171
Cdd:PRK12837   75 EYY----HAVVGDRTPRDLQETYVrggaPLIEYLEqdEH---FEFAELPWP------DYFGKAPKARADGQRHIVPKPLP 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 172 rghrAKGAGLPGESFYEPLraSAHRAGieveyeARVTRLVIDSRNrVLGVEYRQIKKGFWSSLyrRLNQAGVAIVKYNPK 251
Cdd:PRK12837  142 ----AAALGELREQIRGPL--DTERLG------APPPDYLVGGRA-LIGRFLAALARFPNARL--RLNTPLVELVVEDGR 206
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 252 VAAKLrkhcfqIEADHSVLkRVRAINGVVLAAGGFIYNRDMVKEIAPKYRSGMPLGTASDNGSGILLGQSVGGKTDLMDR 331
Cdd:PRK12837  207 VVGAV------VERGGERR-RVRARRGVLLAAGGFEQNDDMRARYGVPGSARDTMGGPGNTGLAHQAAIAVGADTDLMDQ 279
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 332 isAW---RFINPP--EAFA----KGMIINQNGERYINEFMYGAAVGEAMVEHNDGVAI-----LIIN---GELKKLAREQ 394
Cdd:PRK12837  280 --AWwspGLTHPDgrSAFAlwftGGIFVDQHGERFVNESAPYDRLGRAVIAEMDSGGMtlpfwMIYDdreGEVPPVKATN 357
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 395 CKPGKAQWFQRApallNLWfnsKEAKTVDELAKVAKVPLETLRKTLDEYNDAADGKMADRFNKGS---DRMHAMRNGPYF 471
Cdd:PRK12837  358 VSMVETAQYVAA----GLW---RTADTLEELAAKIGVPADALTATVARFNGFAAAGVDEDFGRGDeayDRAFSGGASPLV 430
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1490518948 472 AINAG-IKSKRFPCPTL-TLGGLVVDERtGQVKSEDGGVIPGLYAAGRNAVGVCSRQYVSG 530
Cdd:PRK12837  431 PIDTPpFHAAAFGVSDLgTKGGLRTDTA-ARVLDTDGRPIPGLYAAGNTMAAVSGTTYPGG 490
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
47-516 1.24e-19

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 91.58  E-value: 1.24e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  47 LEASANGARVLVLDR-FHGGGATAISGGVFYAGGgthiQSEAGATDDADEMFRYLSLEVKGVVAEETLRDFCDTSVDNLT 125
Cdd:pfam00890  16 LAAAEAGLKVAVVEKgQPFGGATAWSSGGIDALG----NPPQGGIDSPELHPTDTLKGLDELADHPYVEAFVEAAPEAVD 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 126 WLEEHGVPFEaslcpyktsyPTDDYYLYYSGNEGFSPYKEAAKPAPRGHRAKGaglPGESFYEPLRASAHRAGIEVEYEA 205
Cdd:pfam00890  92 WLEALGVPFS----------RTEDGHLDLRPLGGLSATWRTPHDAADRRRGLG---TGHALLARLLEGLRKAGVDFQPRT 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 206 RVTRLVIDSrNRVLGVEYRQIKKGfwsslyrrlnqagvaivkynpkvaaklrkhcfqieadhsVLKRVRAINGVVLAAGG 285
Cdd:pfam00890 159 AADDLIVED-GRVTGAVVENRRNG---------------------------------------REVRIRAIAAVLLATGG 198
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 286 FiyNRDmVKEIAPKYRSGMPLGTASDNGSGILLGQSVGGK--TDLMDRI----SAWRFINPP-----EAFAK--GMIINQ 352
Cdd:pfam00890 199 F--GRL-AELLLPAAGYADTTNPPANTGDGLALALRAGAAltDDLMEFVqfhpTSLVGIRLGsglliEALRGegGILVNK 275
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 353 NGERYINEFMYGAAVGEAMVEHndgvailiingelkklarEQCKPGKAqwfqrapallNLWFNSKeaktvdelakvAKVP 432
Cdd:pfam00890 276 DGRRFMNELASRDVVSRAITRN------------------EIDEGRGA----------NVYLDAS-----------GSLD 316
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 433 LETLRKTLDEYNDAA----DGKMADRFNkgsdrmhamrngPYFAinagikskrfPCPtLTLGGLVVDErTGQVKSEDGGV 508
Cdd:pfam00890 317 AEGLEATLPAINEEAifglDVDPYDRPI------------PVFP----------AQH-YTMGGVRTDE-NGRVLDADGQP 372

                  ....*...
gi 1490518948 509 IPGLYAAG 516
Cdd:pfam00890 373 IPGLYAAG 380
PRK08274 PRK08274
FAD-dependent tricarballylate dehydrogenase TcuA;
47-533 4.29e-17

FAD-dependent tricarballylate dehydrogenase TcuA;


Pssm-ID: 236214 [Multi-domain]  Cd Length: 466  Bit Score: 84.16  E-value: 4.29e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  47 LEASANGARVLVLD---RFHGGGATAISGGVFYAgggtHiqseAGATD------DADEMFRYLsLEVKGVVAEETL-RDF 116
Cdd:PRK08274   21 LAAREAGASVLLLEaapREWRGGNSRHTRNLRCM----H----DAPQDvlvgayPEEEFWQDL-LRVTGGRTDEALaRLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 117 CDTSVDNLTWLEEHGVPFEASLcpyktsyptdDYYLYYSGNEGFspykeaakpaPRGhraKGAGLpgesfYEPLRASAHR 196
Cdd:PRK08274   92 IRESSDCRDWMRKHGVRFQPPL----------SGALHVARTNAF----------FWG---GGKAL-----VNALYRSAER 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 197 AGIEVEYEARVTRLVIDSrNRVLGVEYRQIKKGfwsslyrrlnqagvaivkynpkvaaklrkhcfqieadhsvLKRVRAi 276
Cdd:PRK08274  144 LGVEIRYDAPVTALELDD-GRFVGARAGSAAGG----------------------------------------AERIRA- 181
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 277 NGVVLAAGGFIYNRDMVKE-IAPKYRSGMPLGTASDNGSGILLGQSVGGktdlmDRISAW-----------------RFI 338
Cdd:PRK08274  182 KAVVLAAGGFESNREWLREaWGQPADNFLVRGTPYNQGDLLKALLDAGA-----DRIGDPsqchavaidaraplydgGIC 256
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 339 NPPEAFAKGMIINQNGERYINE------FMYgAAVGEAMVEHNDGVAILIINGELKKLAREQCKPGKaqwfqrapallnl 412
Cdd:PRK08274  257 TRIDCVPLGIVVNRDGERFYDEgedfwpKRY-AIWGRLVAQQPGQIAYQIFDAKAIGRFMPPVFPPI------------- 322
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 413 wfnskEAKTVDELAKVAKVPLETLRKTLDEYNDAA------DGKMADRFNKG--SDRMHAMR---NGPYFA--INAGIks 479
Cdd:PRK08274  323 -----QADTLEELAEKLGLDPAAFLRTVAAFNAAVrpgpfdPTVLDDCGTEGltPPKSHWARpidTPPFYAypVRPGI-- 395
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1490518948 480 krfpcpTLTLGGLVVDErTGQVKSEDGGVIPGLYAAGRNAVG-VCSRQYV--SGLSI 533
Cdd:PRK08274  396 ------TFTYLGLKVDE-DARVRFADGRPSPNLFAAGEMMAGnVLGKGYPagVGLTI 445
PRK12839 PRK12839
FAD-dependent oxidoreductase;
190-530 5.61e-17

FAD-dependent oxidoreductase;


Pssm-ID: 237223 [Multi-domain]  Cd Length: 572  Bit Score: 84.50  E-value: 5.61e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 190 LRASAHRAGIEVEYEARVTRLVIDSRNRVLGVeyrqikkgfwsslyrRLNQAGVAIvkynpkvaaklrkhcfqieadhsv 269
Cdd:PRK12839  220 LLRSADDLGVDLRVSTSATSLTTDKNGRVTGV---------------RVQGPDGAV------------------------ 260
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 270 lkRVRAINGVVLAAGGFIYNRDMVKEIAPKYRSGM---PLGTASDNGSGILLGQSVGGKTDL-MDRISAW------RFIN 339
Cdd:PRK12839  261 --TVEATRGVVLATGGFPNDVDRRKELFPRTPTGRehwTLAPAETTGDGISLAESVGARLDRdLASPAAWcpvslvPYRN 338
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 340 PPEAF-------AK-GMI-INQNGERYINE----FMYGAAVGEAMVEHNDGVAILIINGE-LKKLAREQCKPGKAQWFqr 405
Cdd:PRK12839  339 GKVGTfphimdrGKpGSIgVLATGKRFVNEangyYDYTLAMVKAAPEGEPVCSWLIADSRfVRKYPLGMAKPLPVPLT-- 416
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 406 aPALLNLWFnsKEAKTVDELAKVAKVPLETLRKTLDEYN----DAAD---GKMADRFNKGS-DRMHA-------MRNGPY 470
Cdd:PRK12839  417 -PYLRSGYL--TRGRTIEELAEKCGIDPAGLEATVAEFNenarDGEDpefGRGTTPFNRGSgDPDNGpnpslapLEKGPF 493
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 471 FAInagiksKRFPCPTLTLGGLVVDERTgQVKSEDGGVIPGLYAAGRNAVGVCSRQYVSG 530
Cdd:PRK12839  494 YAV------KVVPGSFGTFAGLVADGKS-RVLRDDDTPIDGLYAAGNDQASVMGGHYPSG 546
PRK06134 PRK06134
putative FAD-binding dehydrogenase; Reviewed
270-530 5.47e-16

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 180419 [Multi-domain]  Cd Length: 581  Bit Score: 81.31  E-value: 5.47e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 270 LKRVRAINGVVLAAGGFIYNRDMVKEIAPKYRSG---MPLGTASDNGSGILLGQSVGG--KTDLMDRIsAWRFINP-PEA 343
Cdd:PRK06134  261 LQEIRARKGVVLAAGGFPHDPARRAALFPRAPTGhehLSLPPPGNSGDGLRLGESAGGvvATDLASPV-AWAPVSLvPHA 339
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 344 FAK-------------GMI-INQNGERYINE----FMYGAAVGEAMVEHNDGVAILIINGE-LKKLAREQCKPgkaqwfq 404
Cdd:PRK06134  340 DGSvghfphiiergkpGLIgVLANGKRFVNEadsyHDYVAAMFAATPPGQPVRSWLICDHRfLRRYGLGHIRP------- 412
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 405 rAPALLNLWFNS---KEAKTVDELAKVAKVPLETLRKTLDEYNDAADGKMADRFNKGS---DRMH-------------AM 465
Cdd:PRK06134  413 -APLPLGPYVRSgylKRGASLEELARACGIDPDGLEATVARYNRHARNGQDPDFGRGStpyNRKQgdpahggpnpcvaPI 491
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1490518948 466 RNGPYFAInagiksKRFPCPTLTLGGLVVDERtGQVKSEDGGVIPGLYAAGRNAVGVCSRQYVSG 530
Cdd:PRK06134  492 EHGPFYAV------KVLPGCLGTFAGLKTDAD-ARVLDQAGQPIPGLYAAGNDMASVMGGFYPSG 549
PTZ00306 PTZ00306
NADH-dependent fumarate reductase; Provisional
31-537 1.29e-11

NADH-dependent fumarate reductase; Provisional


Pssm-ID: 140327 [Multi-domain]  Cd Length: 1167  Bit Score: 67.88  E-value: 1.29e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948   31 ADAVVVGFGGAGACAALEASANGARVLVLD---RFHGGGATAISGgvfYAGGGTHIQSEAGATDDADEMFRYLSLEVKGV 107
Cdd:PTZ00306   410 ARVIVVGGGLAGCSAAIEAASCGAQVILLEkeaKLGGNSAKATSG---INGWGTRAQAKQDVLDGGKFFERDTHLSGKGG 486
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  108 VAEETL-RDFCDTSVDNLTWLEEHGVPFEAslcpyktsyptddyyLYYSGNEGFspykeaakpaPRGHRA--KGAGLP-- 182
Cdd:PTZ00306   487 HCDPGLvKTLSVKSADAISWLSSLGVPLTV---------------LSQLGGASR----------KRCHRApdKKDGTPvp 541
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  183 -GESFYEPLRASAH---RAGIEVEYEARVTRLVIDSRN--------RVLGVEYRQIKKGfwSSLYRRLNqagvaivkynp 250
Cdd:PTZ00306   542 iGFTIMRTLEDHIRtklSGRVTIMTETTVTSLLSESSArpdgvreiRVTGVRYKQASDA--SGQVMDLL----------- 608
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  251 kvaaklrkhcfqieADhsvlkrvrainGVVLAAGGFIYNR---DMVKEIAPKYrSGMPLGTAS-DNGSGILLGQSVGGKT 326
Cdd:PTZ00306   609 --------------AD-----------AVILATGGFSNDHtpnSLLREYAPQL-SGFPTTNGPwATGDGVKLARKLGATL 662
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  327 DLMDRIS--AWRFINP-----------PEAF--AKGMIINQNGERYINEFMYGAAVGEAMVEHND--------GVAILII 383
Cdd:PTZ00306   663 VDMDKVQlhPTGLIDPkdpsnrtkylgPEALrgSGGVLLNKNGERFVNELDLRSVVSQAIIAQGNeypgsggsKFAYCVL 742
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  384 NGELKKLAreqckpGKaqwfqrapALLNLWFNS----KEAKTVDELAKVAKVPLETLRKTLDEYNDAADGKMADRF-NKG 458
Cdd:PTZ00306   743 NEAAAKLF------GK--------NSLGFYWKRlglfQRVDDVKGLAKLIGCPVENLHRTLETYERLSTKKVACPLtGKV 808
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948  459 SDRMHAMRNGPYFAInagikskrFPCPTL--TLGGLVVDErTGQVKSEDGGV--------IPGLYAAGRNAVGVCSRQYV 528
Cdd:PTZ00306   809 VFPCVVGTQGPYYVA--------FVTPSIhyTMGGCLISP-SAEMQMEDNSVnifedrrpILGLFGAGEVTGGVHGGNRL 879

                   ....*....
gi 1490518948  529 SGLSIADCV 537
Cdd:PTZ00306   880 GGNSLLECV 888
COG3573 COG3573
Predicted oxidoreductase [General function prediction only];
419-516 2.44e-04

Predicted oxidoreductase [General function prediction only];


Pssm-ID: 442794 [Multi-domain]  Cd Length: 551  Bit Score: 44.01  E-value: 2.44e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490518948 419 AKTVDELAK-------VAKVPLETLRKTLDEYndaaDGKMADRFNK-------------GSDRM------HAM---RNGP 469
Cdd:COG3573   397 ADTLEELVAgmnaltgEPLLDAATLRRQIEAR----DRQIDNPFSKdaqirairnarryRGDRLirtakpHRLldpKAGP 472
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1490518948 470 YFAINAGIKSKRfpcptlTLGGLVVDeRTGQVKSEDGGVIPGLYAAG 516
Cdd:COG3573   473 LIAVRLNILTRK------TLGGLQTD-LDSRVLDADGQPIPGLYAAG 512
PRK12834 PRK12834
putative FAD-binding dehydrogenase; Reviewed
466-516 8.65e-03

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 183782 [Multi-domain]  Cd Length: 549  Bit Score: 39.11  E-value: 8.65e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1490518948 466 RNGPYFAINAGIKSKRfpcptlTLGGLVVDeRTGQVKSEDGGVIPGLYAAG 516
Cdd:PRK12834  468 AAGPLIAVRLHILTRK------TLGGLETD-LDSRVLGADGTPLPGLYAAG 511
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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