putative Lipoprotein [Pseudomonas syringae pv. pisi]
Protein Classification
putative periplasmic lipoprotein( domain architecture ID 37384)
putative periplasmic lipoprotein such as the type IV secretion system putative lipoprotein virB7 is a DUF1425 domain-containing protein similar to Escherichia coli protein YcfL; its globular domain adopts an immunoglobulin-like fold; virB7 is part of the outer membrane core complex of a conjugative type IV secretion system
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| DUF1425 super family | cl12345 | Putative periplasmic lipoprotein; This bacterial family of proteins contains members described ... |
7-66 | 9.32e-03 | ||
Putative periplasmic lipoprotein; This bacterial family of proteins contains members described as putative lipoproteins, some are also known as YcfL. The function of this family is unknown. Family members have also been annotated as predicted periplasmic lipoproteins (COG5633), and appear to contain an N-terminal membrane lipoprotein lipid attachment side (pfam08139), which is not included in this alignment model. The actual alignment was detected with superfamily member COG5633: Pssm-ID: 472303 Cd Length: 128 Bit Score: 32.65 E-value: 9.32e-03
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| Name | Accession | Description | Interval | E-value | ||
| YcfL | COG5633 | Uncharacterized conserved protein YcfL [Function unknown]; |
7-66 | 9.32e-03 | ||
Uncharacterized conserved protein YcfL [Function unknown]; Pssm-ID: 444360 Cd Length: 128 Bit Score: 32.65 E-value: 9.32e-03
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| Name | Accession | Description | Interval | E-value | ||
| YcfL | COG5633 | Uncharacterized conserved protein YcfL [Function unknown]; |
7-66 | 9.32e-03 | ||
Uncharacterized conserved protein YcfL [Function unknown]; Pssm-ID: 444360 Cd Length: 128 Bit Score: 32.65 E-value: 9.32e-03
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| Blast search parameters | ||||
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