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Conserved domains on  [gi|1532241082|gb|RRQ14878|]
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hypothetical protein CXF47_02980 [Corynebacterium bovis]

Protein Classification

DUF5319 domain-containing protein( domain architecture ID 13879251)

DUF5319 domain-containing protein similar to Mycobacterium tuberculosis protein Rv3412

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF5319 pfam17252
Family of unknown function (DUF5319); This is a family of unknown function mostly found in ...
 1-118 2.38e-54

Family of unknown function (DUF5319); This is a family of unknown function mostly found in Actinobacteria.


:

Pssm-ID: 465393  Cd Length: 121  Bit Score: 166.26  E-value: 2.38e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1532241082   1 MPPDPFADDPNDPASFMDPDPDGdyEELSAEEVFALQEDLENVRLFRSLLEPRGILGIATLCDDCDEVHYYDWAIIVGRI 80
Cdd:pfam17252   5 MPRDPFADDPNDPASFLEDDEEL--PPLSDEERAEVLQDLADVRVFQALLEPRGIRGIVFLCEDCDEPHYYDWDILRANL 82

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1532241082  81 TTMLSREPAPVHEPGAAPDPNMYVTWDYCAGYADAADH 118
Cdd:pfam17252  83 RALLAGGLSPVHEPSADPDPDAYVPWDYCRGYLDGLEG 120
 
Name Accession Description Interval E-value
DUF5319 pfam17252
Family of unknown function (DUF5319); This is a family of unknown function mostly found in ...
 1-118 2.38e-54

Family of unknown function (DUF5319); This is a family of unknown function mostly found in Actinobacteria.


Pssm-ID: 465393  Cd Length: 121  Bit Score: 166.26  E-value: 2.38e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1532241082   1 MPPDPFADDPNDPASFMDPDPDGdyEELSAEEVFALQEDLENVRLFRSLLEPRGILGIATLCDDCDEVHYYDWAIIVGRI 80
Cdd:pfam17252   5 MPRDPFADDPNDPASFLEDDEEL--PPLSDEERAEVLQDLADVRVFQALLEPRGIRGIVFLCEDCDEPHYYDWDILRANL 82

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1532241082  81 TTMLSREPAPVHEPGAAPDPNMYVTWDYCAGYADAADH 118
Cdd:pfam17252  83 RALLAGGLSPVHEPSADPDPDAYVPWDYCRGYLDGLEG 120
 
Name Accession Description Interval E-value
DUF5319 pfam17252
Family of unknown function (DUF5319); This is a family of unknown function mostly found in ...
 1-118 2.38e-54

Family of unknown function (DUF5319); This is a family of unknown function mostly found in Actinobacteria.


Pssm-ID: 465393  Cd Length: 121  Bit Score: 166.26  E-value: 2.38e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1532241082   1 MPPDPFADDPNDPASFMDPDPDGdyEELSAEEVFALQEDLENVRLFRSLLEPRGILGIATLCDDCDEVHYYDWAIIVGRI 80
Cdd:pfam17252   5 MPRDPFADDPNDPASFLEDDEEL--PPLSDEERAEVLQDLADVRVFQALLEPRGIRGIVFLCEDCDEPHYYDWDILRANL 82

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1532241082  81 TTMLSREPAPVHEPGAAPDPNMYVTWDYCAGYADAADH 118
Cdd:pfam17252  83 RALLAGGLSPVHEPSADPDPDAYVPWDYCRGYLDGLEG 120
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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