|
Name |
Accession |
Description |
Interval |
E-value |
| RpiR |
COG1737 |
DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains ... |
14-289 |
3.13e-54 |
|
DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains [Transcription];
Pssm-ID: 441343 [Multi-domain] Cd Length: 286 Bit Score: 177.81 E-value: 3.13e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 14 DRFRARAHQLTPRLLQVARYIHDNREAVMEQTAMEIAAVLKTSDATVVRAIQALGFAGLRDLKQTLEQWFGPVVTSSEKM 93
Cdd:COG1737 9 ERIRARYPSLSPSERRIADYILDNPEEVAFMSIAELAEAAGVSEATVVRFCRKLGFSGFPELKLALAQELAEGLSSYERL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 94 STTvnTLASDVNASIDFVLEGHQHTCEVLSEPHNRYAMAQAVSLLAQARQVAIFGIGASGILAEYTARLFSRMGLPATPL 173
Cdd:COG1737 89 RRL--SPDDSLEDILAKVLEAEIANLEETLELLDEEALERAVDLLAKARRIYIFGVGASAPVAEDLAYKLLRLGKNVVLL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 174 NRTGIGLAEQLIALQRGDVLVMMAQKSAHREGQTTLREAKRLSIPTILLTNALDSRFSKEASVVIHVPRGGEK---GKIP 250
Cdd:COG1737 167 DGDGHLQAESAALLGPGDVVIAISFSGYTRETLEAARLAKERGAKVIAITDSPLSPLAKLADVVLYVPSEEPTlrsSAFS 246
|
250 260 270
....*....|....*....|....*....|....*....
gi 1542754317 251 LHGTVLLCLEMIILSVAATEPQRAIKSMKRINELHRGLK 289
Cdd:COG1737 247 SRVAQLALIDALAAAVAQRDGDKARERLERTEALLSELR 285
|
|
| SIS_RpiR |
cd05013 |
RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many ... |
130-241 |
4.15e-17 |
|
RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Pssm-ID: 240144 [Multi-domain] Cd Length: 139 Bit Score: 76.11 E-value: 4.15e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 130 AMAQAVSLLAQARQVAIFGIGASGILAEYTARLFSRMGLPATPLNRTGIGLAEQLIaLQRGDVLVMMAQKSAHREGQTTL 209
Cdd:cd05013 2 ALEKAVDLLAKARRIYIFGVGSSGLVAEYLAYKLLRLGKPVVLLSDPHLQLMSAAN-LTPGDVVIAISFSGETKETVEAA 80
|
90 100 110
....*....|....*....|....*....|..
gi 1542754317 210 REAKRLSIPTILLTNALDSRFSKEASVVIHVP 241
Cdd:cd05013 81 EIAKERGAKVIAITDSANSPLAKLADIVLLVS 112
|
|
| PRK11337 |
PRK11337 |
MurR/RpiR family transcriptional regulator; |
13-280 |
2.42e-13 |
|
MurR/RpiR family transcriptional regulator;
Pssm-ID: 183089 [Multi-domain] Cd Length: 292 Bit Score: 68.63 E-value: 2.42e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 13 GDRFRARAHQLTPRLLQVARYIHDnREAVMEQTAM-EIAAVLKTSDATVVRAIQALGFAGLRDLKQTLEQWFGPVVTSSE 91
Cdd:PRK11337 16 GPYIRMKQEGLTPLESRVVEWLLK-PGDLSEATALkDIAEALAVSEAMIVKVAKKLGFSGFRNLRSALEDYFSQSEQVLH 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 92 kmsttvNTLASDvNASIDFVLEGHQHTCEVLSEPH---NRYAMAQAVSLLAQARQVAIFGIGASGILAEYTARLFSRMGL 168
Cdd:PRK11337 95 ------SELSFD-DAPQDVVNKVFNTSLQAIEETQsilDVDEFHRAARFFYQARQRDLYGAGGSAAIARDVQHKFLRIGV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 169 PATPLNRTGIGLAEQLIaLQRGDVLVMMAQKSAHREGQTTLREAKRLSIPTILLTNALDSRFSKEASVVIHVPRGGEkgk 248
Cdd:PRK11337 168 RCQAYDDAHIMLMSAAL-LQEGDVVLVVSHSGRTSDVIEAVELAKKNGAKIICITNSYHSPIAKLADYVICSTAQGS--- 243
|
250 260 270
....*....|....*....|....*....|....*....
gi 1542754317 249 iPLHG-------TVLLCLEMIILSVAATEPQRAIKSMKR 280
Cdd:PRK11337 244 -PLLGenaaariAQLNILDAFFVSVAQLNIEQAEINLQK 281
|
|
| SIS |
pfam01380 |
SIS domain; SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and ... |
137-241 |
1.03e-08 |
|
SIS domain; SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars. Presumably the SIS domains bind to the end-product of the pathway.
Pssm-ID: 426230 [Multi-domain] Cd Length: 131 Bit Score: 52.69 E-value: 1.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 137 LLAQARQVAIFGIGASGILAEYTARLFSRMGLPATPLNRTGIGLAEQLIALQRGDVLVMMAQKSAHREGQTTLREAKRLS 216
Cdd:pfam01380 1 LLAKAKRIFVIGRGTSYAIALELALKFEEIGYKVVEVELASELRHGVLALVDEDDLVIAISYSGETKDLLAAAELAKARG 80
|
90 100
....*....|....*....|....*
gi 1542754317 217 IPTILLTNALDSRFSKEASVVIHVP 241
Cdd:pfam01380 81 AKIIAITDSPGSPLAREADHVLYIN 105
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| RpiR |
COG1737 |
DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains ... |
14-289 |
3.13e-54 |
|
DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains [Transcription];
Pssm-ID: 441343 [Multi-domain] Cd Length: 286 Bit Score: 177.81 E-value: 3.13e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 14 DRFRARAHQLTPRLLQVARYIHDNREAVMEQTAMEIAAVLKTSDATVVRAIQALGFAGLRDLKQTLEQWFGPVVTSSEKM 93
Cdd:COG1737 9 ERIRARYPSLSPSERRIADYILDNPEEVAFMSIAELAEAAGVSEATVVRFCRKLGFSGFPELKLALAQELAEGLSSYERL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 94 STTvnTLASDVNASIDFVLEGHQHTCEVLSEPHNRYAMAQAVSLLAQARQVAIFGIGASGILAEYTARLFSRMGLPATPL 173
Cdd:COG1737 89 RRL--SPDDSLEDILAKVLEAEIANLEETLELLDEEALERAVDLLAKARRIYIFGVGASAPVAEDLAYKLLRLGKNVVLL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 174 NRTGIGLAEQLIALQRGDVLVMMAQKSAHREGQTTLREAKRLSIPTILLTNALDSRFSKEASVVIHVPRGGEK---GKIP 250
Cdd:COG1737 167 DGDGHLQAESAALLGPGDVVIAISFSGYTRETLEAARLAKERGAKVIAITDSPLSPLAKLADVVLYVPSEEPTlrsSAFS 246
|
250 260 270
....*....|....*....|....*....|....*....
gi 1542754317 251 LHGTVLLCLEMIILSVAATEPQRAIKSMKRINELHRGLK 289
Cdd:COG1737 247 SRVAQLALIDALAAAVAQRDGDKARERLERTEALLSELR 285
|
|
| SIS_RpiR |
cd05013 |
RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many ... |
130-241 |
4.15e-17 |
|
RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Pssm-ID: 240144 [Multi-domain] Cd Length: 139 Bit Score: 76.11 E-value: 4.15e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 130 AMAQAVSLLAQARQVAIFGIGASGILAEYTARLFSRMGLPATPLNRTGIGLAEQLIaLQRGDVLVMMAQKSAHREGQTTL 209
Cdd:cd05013 2 ALEKAVDLLAKARRIYIFGVGSSGLVAEYLAYKLLRLGKPVVLLSDPHLQLMSAAN-LTPGDVVIAISFSGETKETVEAA 80
|
90 100 110
....*....|....*....|....*....|..
gi 1542754317 210 REAKRLSIPTILLTNALDSRFSKEASVVIHVP 241
Cdd:cd05013 81 EIAKERGAKVIAITDSANSPLAKLADIVLLVS 112
|
|
| SIS |
cd04795 |
SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and ... |
144-226 |
7.57e-17 |
|
SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Pssm-ID: 240112 [Multi-domain] Cd Length: 87 Bit Score: 73.95 E-value: 7.57e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 144 VAIFGIGASGILAEYTARLFSRM-GLPATPLNRTGIGLAEQLIALQRGDVLVMMAQKSAHREGQTTLREAKRLSIPTILL 222
Cdd:cd04795 1 IFVIGIGGSGAIAAYFALELLELtGIEVVALIATELEHASLLSLLRKGDVVIALSYSGRTEELLAALEIAKELGIPVIAI 80
|
....
gi 1542754317 223 TNAL 226
Cdd:cd04795 81 TDAL 84
|
|
| PRK11337 |
PRK11337 |
MurR/RpiR family transcriptional regulator; |
13-280 |
2.42e-13 |
|
MurR/RpiR family transcriptional regulator;
Pssm-ID: 183089 [Multi-domain] Cd Length: 292 Bit Score: 68.63 E-value: 2.42e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 13 GDRFRARAHQLTPRLLQVARYIHDnREAVMEQTAM-EIAAVLKTSDATVVRAIQALGFAGLRDLKQTLEQWFGPVVTSSE 91
Cdd:PRK11337 16 GPYIRMKQEGLTPLESRVVEWLLK-PGDLSEATALkDIAEALAVSEAMIVKVAKKLGFSGFRNLRSALEDYFSQSEQVLH 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 92 kmsttvNTLASDvNASIDFVLEGHQHTCEVLSEPH---NRYAMAQAVSLLAQARQVAIFGIGASGILAEYTARLFSRMGL 168
Cdd:PRK11337 95 ------SELSFD-DAPQDVVNKVFNTSLQAIEETQsilDVDEFHRAARFFYQARQRDLYGAGGSAAIARDVQHKFLRIGV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 169 PATPLNRTGIGLAEQLIaLQRGDVLVMMAQKSAHREGQTTLREAKRLSIPTILLTNALDSRFSKEASVVIHVPRGGEkgk 248
Cdd:PRK11337 168 RCQAYDDAHIMLMSAAL-LQEGDVVLVVSHSGRTSDVIEAVELAKKNGAKIICITNSYHSPIAKLADYVICSTAQGS--- 243
|
250 260 270
....*....|....*....|....*....|....*....
gi 1542754317 249 iPLHG-------TVLLCLEMIILSVAATEPQRAIKSMKR 280
Cdd:PRK11337 244 -PLLGenaaariAQLNILDAFFVSVAQLNIEQAEINLQK 281
|
|
| PRK14101 |
PRK14101 |
bifunctional transcriptional regulator/glucokinase; |
14-240 |
9.31e-13 |
|
bifunctional transcriptional regulator/glucokinase;
Pssm-ID: 184507 [Multi-domain] Cd Length: 638 Bit Score: 68.40 E-value: 9.31e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 14 DRFRARAHQLTPRLLQVARYIHDNREAVMEQTAMEIAAVLKTSDATVVRAIQALGFAGLRDLKQTLeqwfGPVVTSSEKM 93
Cdd:PRK14101 345 ERIRQMRDALTPAERRVADLALNHPRSIINDPIVDIARKADVSQPTVIRFCRSLGCQGLSDFKLKL----ATGLTGTIPM 420
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 94 S--------TTVNTLASDVNASIDFVLEghqhtcevLSEPHNRYAMAQAVSLLAQARQVAIFGIGASGILAEYTARLFSR 165
Cdd:PRK14101 421 ShsqvhlgdTATDFGAKVLDNTVSAILQ--------LREHLNFEHVEQAIDILNNARRIEFYGLGNSNIVAQDAHYKFFR 492
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1542754317 166 MGLPAtpLNRTGIGLAEQLIA-LQRGDVLVMMAQKSAHREGQTTLREAKRLSIPTILLTNAlDSRFSKEASVVIHV 240
Cdd:PRK14101 493 FGIPT--IAYGDLYMQAASAAlLGKGDVIVAVSKSGRAPELLRVLDVAMQAGAKVIAITSS-NTPLAKRATVALET 565
|
|
| SIS |
pfam01380 |
SIS domain; SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and ... |
137-241 |
1.03e-08 |
|
SIS domain; SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars. Presumably the SIS domains bind to the end-product of the pathway.
Pssm-ID: 426230 [Multi-domain] Cd Length: 131 Bit Score: 52.69 E-value: 1.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 137 LLAQARQVAIFGIGASGILAEYTARLFSRMGLPATPLNRTGIGLAEQLIALQRGDVLVMMAQKSAHREGQTTLREAKRLS 216
Cdd:pfam01380 1 LLAKAKRIFVIGRGTSYAIALELALKFEEIGYKVVEVELASELRHGVLALVDEDDLVIAISYSGETKDLLAAAELAKARG 80
|
90 100
....*....|....*....|....*
gi 1542754317 217 IPTILLTNALDSRFSKEASVVIHVP 241
Cdd:pfam01380 81 AKIIAITDSPGSPLAREADHVLYIN 105
|
|
| SIS_Kpsf |
cd05014 |
KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ... |
144-241 |
2.06e-08 |
|
KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Pssm-ID: 240145 [Multi-domain] Cd Length: 128 Bit Score: 51.77 E-value: 2.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 144 VAIFGIGASGILAEYTARLFSRMGLPATPLNRT-----GIGLaeqliaLQRGDVLVMMAQKSAHREGQTTLREAKRLSIP 218
Cdd:cd05014 3 VVVTGVGKSGHIARKIAATLSSTGTPAFFLHPTealhgDLGM------VTPGDVVIAISNSGETDELLNLLPHLKRRGAP 76
|
90 100
....*....|....*....|...
gi 1542754317 219 TILLTNALDSRFSKEASVVIHVP 241
Cdd:cd05014 77 IIAITGNPNSTLAKLSDVVLDLP 99
|
|
| PRK11302 |
PRK11302 |
DNA-binding transcriptional regulator HexR; Provisional |
44-241 |
6.45e-07 |
|
DNA-binding transcriptional regulator HexR; Provisional
Pssm-ID: 183082 [Multi-domain] Cd Length: 284 Bit Score: 49.61 E-value: 6.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 44 QTAM--EIAAVLKT---SDATVVRAIQALGFAGLRDLKQTLEQWFG---PVVTSSEKMSTTVNTLASDVNASidfVLEGH 115
Cdd:PRK11302 30 QTAIhsSIATLAKManvSEPTVNRFCRSLDTKGFPDFKLHLAQSLAngtPYVNRNVEEDDSVEAYTGKIFES---AMASL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 116 QHTCEVLSEPhnryAMAQAVSLLAQARQVAIFGIGASGILAEYTARLFSRMGLPATplnrtgiglAEQLIALQR------ 189
Cdd:PRK11302 107 DHARQSLDPS----AINRAVDLLTQAKKISFFGLGASAAVAHDAQNKFFRFNVPVV---------YFDDIVMQRmscmns 173
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1542754317 190 --GDVLVMMAQKSAHREGQTTLREAKRLSIPTILLTNAlDSRFSKEASVVIHVP 241
Cdd:PRK11302 174 sdGDVVVLISHTGRTKSLVELAQLARENGATVIAITSA-GSPLAREATLALTLD 226
|
|
| PRK11557 |
PRK11557 |
MurR/RpiR family transcriptional regulator; |
19-229 |
4.76e-06 |
|
MurR/RpiR family transcriptional regulator;
Pssm-ID: 183195 [Multi-domain] Cd Length: 278 Bit Score: 47.07 E-value: 4.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 19 RAHQLTPRLLQ----VARYIHDNREAVMEQTAMEIAAVLKTSDATVVRAIQALGFAGLRDLKQTL-----EQWFGPVVT- 88
Cdd:PRK11557 2 RIRQRYPGLAQsdrkLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALsealaSQPEPPSVPv 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 89 -----SSEKMSTTVNTLASDVNASIdfvleghQHTCEVLSEPHnryaMAQAVSLLAQARQVAIFGIGASGILAEYTARLF 163
Cdd:PRK11557 82 hnqirGDDPLRLVGEKLIKENTAAM-------RATLDVNSEEK----LHECVTMLRSARRIILTGIGASGLVAQNFAWKL 150
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 164 SRMGLPATPLNRTGIGLAeQLIALQRGDVLVMMAQKSAHREGQTTLREAKRLSIPTILLT----NALDSR 229
Cdd:PRK11557 151 MKIGINAVAERDMHALLA-TVQALSPDDLLLAISYSGERRELNLAADEALRVGAKVLAITgftpNALQQR 219
|
|
| HTH_6 |
pfam01418 |
Helix-turn-helix domain, rpiR family; This domain contains a helix-turn-helix motif. The best ... |
15-85 |
9.39e-06 |
|
Helix-turn-helix domain, rpiR family; This domain contains a helix-turn-helix motif. The best characterized member of this family is Swiss:P39266. RpiR is a regulator of the expression of rpiB gene.
Pssm-ID: 334531 [Multi-domain] Cd Length: 77 Bit Score: 43.09 E-value: 9.39e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1542754317 15 RFRARAHQLTPRLLQVARYIHDNREAVMEQTAMEIAAVLKTSDATVVRAIQALGFAGLRDLKQTLEQWFGP 85
Cdd:pfam01418 6 KIQSRYSKLTKSERKIADYILAHPDLAIHLSISAIAKAAGVSEATIVRFCQKLGFSGFPELKLALAGELAN 76
|
|
| AgaS |
COG2222 |
Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain ... |
126-247 |
1.68e-05 |
|
Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 441824 [Multi-domain] Cd Length: 336 Bit Score: 45.66 E-value: 1.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 126 HNRYAMAQAVSLLAQARQVAIF--GIGASGILAEYTARLFSRMG------LPATPLNRTGIGLAEqlialqRGDVLVMMA 197
Cdd:COG2222 17 ALAAAIAALLARLRAKPPRRVVlvGAGSSDHAAQAAAYLLERLLgipvaaLAPSELVVYPAYLKL------EGTLVVAIS 90
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1542754317 198 Q--KSAhrEGQTTLREAKRLSIPTILLTNALDSRFSKEASVVIHVPRGGEKG 247
Cdd:COG2222 91 RsgNSP--EVVAALELAKARGARTLAITNNPDSPLAEAADRVLPLPAGPEKS 140
|
|
| PRK15482 |
PRK15482 |
HTH-type transcriptional regulator MurR; |
11-234 |
6.55e-04 |
|
HTH-type transcriptional regulator MurR;
Pssm-ID: 185379 [Multi-domain] Cd Length: 285 Bit Score: 40.45 E-value: 6.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 11 VYGDRFRARAHQLTPRLLQVARYIHDNREAVMEQTAMEIAAVLKTSDATVVRAIQALGFAGLRDLKQTLeqwFGPVVTSS 90
Cdd:PRK15482 2 LYLTKIRNAESEFTENEQKIADFLRANVSELKSVSSRKMAKQLGISQSSIVKFAQKLGAQGFTELRMAL---IGEYSASR 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 91 EKMSTT-------------VNTLASDVNASIDFVLEghqHTCEVLSephnrYA-MAQAVSLLAQARQVAIFGIGASGILA 156
Cdd:PRK15482 79 EKTNATalhlhssitsddsLEVIARKLNREKELALE---QTCALFD-----YArLQKIIEVISKAPFIQITGLGGSALVG 150
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1542754317 157 EYTARLFSRMGLPATPLNRTGIGlAEQLIALQRGDVLVMMAQKSAHREGQTTLREAKRLSIPTILLTNALDSRFSKEA 234
Cdd:PRK15482 151 RDLSFKLMKIGYRVACEADTHVQ-ATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLA 227
|
|
| SIS_PHI |
cd05005 |
Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) ... |
130-264 |
7.25e-04 |
|
Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Pssm-ID: 240138 [Multi-domain] Cd Length: 179 Bit Score: 39.48 E-value: 7.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 130 AMAQAVSLLAQARQVAIFGIGASGILAEYTA-RLFsRMGLPA-------TPlnrtgiglaeqliALQRGDVLVMMaqkSA 201
Cdd:cd05005 22 ELDKLISAILNAKRIFVYGAGRSGLVAKAFAmRLM-HLGLNVyvvgettTP-------------AIGPGDLLIAI---SG 84
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1542754317 202 HREGQTTL---REAKRLSIPTILLTNALDSRFSKEASVVIHVP------RGGEKGKIPLHGT-----VLLCLEMIIL 264
Cdd:cd05005 85 SGETSSVVnaaEKAKKAGAKVVLITSNPDSPLAKLADVVVVIPaatkddHGGEHKSIQPLGTlfeqsALVFLDAVIA 161
|
|
| GutQ |
COG0794 |
D-arabinose 5-phosphate isomerase GutQ [Carbohydrate transport and metabolism, Cell wall ... |
130-241 |
1.48e-03 |
|
D-arabinose 5-phosphate isomerase GutQ [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440557 [Multi-domain] Cd Length: 317 Bit Score: 39.57 E-value: 1.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1542754317 130 AMAQAVSLLAQAR-QVAIFGIGASGILAEYTARLFSRMGLPATPLNRT-------GIglaeqliaLQRGDVLVMMAqKSa 201
Cdd:COG0794 32 SFEKAVELILNCKgRVVVTGMGKSGHIARKIAATLASTGTPAFFLHPAeashgdlGM--------ITPGDVVIAIS-NS- 101
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1542754317 202 hreGQT-----TLREAKRLSIPTILLTNALDSRFSKEASVVIHVP 241
Cdd:COG0794 102 ---GETeellaLLPLLKRLGVPLIAITGNPDSTLARAADVVLDLP 143
|
|
| |
