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Conserved domains on  [gi|1562733467|gb|RXI66393|]
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hypothetical protein DP123_01100 [Clostridium tetani]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DIP1984_fam NF038048
DIP1984 family protein; Members of this family, including the Corynebacterium diphtheriae ...
 2-150 9.08e-60

DIP1984 family protein; Members of this family, including the Corynebacterium diphtheriae protein DIP1984, which has a solved crystal structure, are uncharacterized with respect to function. Some members of this family previously have been annotated, incorrectly, as septolysin. This model was constructed to overrule and correct such errors. Note that septolysin O, and other members of the family of cholesterol-dependent cytolysins such as listeriolysin O (WP_003722731.1), are unrelated.


:

Pssm-ID: 411640  Cd Length: 149  Bit Score: 181.57  E-value: 9.08e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1562733467   2 KLAEALILRSDYQRKIEQIKNRLINNAKVQEGEEPSEEPEILLKELDEVIENLTDLIKRINKTNSKTKFNEEMTLADALA 81
Cdd:NF038048    1 KLAEALILRADLQKRIEQLKSRLLNNAKVQEGEEPAEDPNELLKELEELLDELEELIIRINRTNSATKLGDGRTLTEALA 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1562733467  82 EREKLWDKRLILSNLAEVAAVKHDRFSRSEVKYFSTIDIKETQKEVDRLSKEFRILDTKIQGLNWTVDL 150
Cdd:NF038048   81 ERDALKLRHSILRDIADAASEKQDRYSRSEIKFVSTVDVKELQKQADELAKELRELDTKIQEANWQTDL 149
 
Name Accession Description Interval E-value
DIP1984_fam NF038048
DIP1984 family protein; Members of this family, including the Corynebacterium diphtheriae ...
 2-150 9.08e-60

DIP1984 family protein; Members of this family, including the Corynebacterium diphtheriae protein DIP1984, which has a solved crystal structure, are uncharacterized with respect to function. Some members of this family previously have been annotated, incorrectly, as septolysin. This model was constructed to overrule and correct such errors. Note that septolysin O, and other members of the family of cholesterol-dependent cytolysins such as listeriolysin O (WP_003722731.1), are unrelated.


Pssm-ID: 411640  Cd Length: 149  Bit Score: 181.57  E-value: 9.08e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1562733467   2 KLAEALILRSDYQRKIEQIKNRLINNAKVQEGEEPSEEPEILLKELDEVIENLTDLIKRINKTNSKTKFNEEMTLADALA 81
Cdd:NF038048    1 KLAEALILRADLQKRIEQLKSRLLNNAKVQEGEEPAEDPNELLKELEELLDELEELIIRINRTNSATKLGDGRTLTEALA 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1562733467  82 EREKLWDKRLILSNLAEVAAVKHDRFSRSEVKYFSTIDIKETQKEVDRLSKEFRILDTKIQGLNWTVDL 150
Cdd:NF038048   81 ERDALKLRHSILRDIADAASEKQDRYSRSEIKFVSTVDVKELQKQADELAKELRELDTKIQEANWQTDL 149
DIP1984-like cd12208
DIP1984 family protein and similar proteins; DIP1984 is an uncharacterized protein from ...
 1-150 1.72e-58

DIP1984 family protein and similar proteins; DIP1984 is an uncharacterized protein from Corynebacterium diphtheriae. Some members of this family may have been misnamed as septicolysin.


Pssm-ID: 411994  Cd Length: 150  Bit Score: 178.52  E-value: 1.72e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1562733467   1 MKLAEALILRSDYQRKIEQIKNRLINNAKVQEGEEPSEEPEILLKELDEVIENLTDLIKRINKTNSKTKFNEEMTLADAL 80
Cdd:cd12208     1 MKLAEALKLRADLQKRIAQLKNRILNNAKVQEGDTPAEDPNELLKELEELLTELEELIIRINRTNSQTKFEDGKTLTEAL 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1562733467  81 AEREKLWDKRLILSNLAEVAAVKHDRFSRSEVKYFSTIDIKETQKEVDRLSKEFRILDTKIQGLNWTVDL 150
Cdd:cd12208    81 AERDVLKLRITILRDLADAASEKQDRYSRSEIKFVSTVDVKELQKKADKLAKELRELDTKIQEANWTTDL 150
 
Name Accession Description Interval E-value
DIP1984_fam NF038048
DIP1984 family protein; Members of this family, including the Corynebacterium diphtheriae ...
 2-150 9.08e-60

DIP1984 family protein; Members of this family, including the Corynebacterium diphtheriae protein DIP1984, which has a solved crystal structure, are uncharacterized with respect to function. Some members of this family previously have been annotated, incorrectly, as septolysin. This model was constructed to overrule and correct such errors. Note that septolysin O, and other members of the family of cholesterol-dependent cytolysins such as listeriolysin O (WP_003722731.1), are unrelated.


Pssm-ID: 411640  Cd Length: 149  Bit Score: 181.57  E-value: 9.08e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1562733467   2 KLAEALILRSDYQRKIEQIKNRLINNAKVQEGEEPSEEPEILLKELDEVIENLTDLIKRINKTNSKTKFNEEMTLADALA 81
Cdd:NF038048    1 KLAEALILRADLQKRIEQLKSRLLNNAKVQEGEEPAEDPNELLKELEELLDELEELIIRINRTNSATKLGDGRTLTEALA 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1562733467  82 EREKLWDKRLILSNLAEVAAVKHDRFSRSEVKYFSTIDIKETQKEVDRLSKEFRILDTKIQGLNWTVDL 150
Cdd:NF038048   81 ERDALKLRHSILRDIADAASEKQDRYSRSEIKFVSTVDVKELQKQADELAKELRELDTKIQEANWQTDL 149
DIP1984-like cd12208
DIP1984 family protein and similar proteins; DIP1984 is an uncharacterized protein from ...
 1-150 1.72e-58

DIP1984 family protein and similar proteins; DIP1984 is an uncharacterized protein from Corynebacterium diphtheriae. Some members of this family may have been misnamed as septicolysin.


Pssm-ID: 411994  Cd Length: 150  Bit Score: 178.52  E-value: 1.72e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1562733467   1 MKLAEALILRSDYQRKIEQIKNRLINNAKVQEGEEPSEEPEILLKELDEVIENLTDLIKRINKTNSKTKFNEEMTLADAL 80
Cdd:cd12208     1 MKLAEALKLRADLQKRIAQLKNRILNNAKVQEGDTPAEDPNELLKELEELLTELEELIIRINRTNSQTKFEDGKTLTEAL 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1562733467  81 AEREKLWDKRLILSNLAEVAAVKHDRFSRSEVKYFSTIDIKETQKEVDRLSKEFRILDTKIQGLNWTVDL 150
Cdd:cd12208    81 AERDVLKLRITILRDLADAASEKQDRYSRSEIKFVSTVDVKELQKKADKLAKELRELDTKIQEANWTTDL 150
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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