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Conserved domains on  [gi|1109749647|emb|SHE04850|]
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Uncharacterised protein [Staphylococcus argenteus]

Protein Classification

NETI domain-containing protein( domain architecture ID 10623945)

NETI domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NETI pfam14044
NETI protein; This family includes the B. subtilis YebG protein, which is functionally ...
 2-54 2.58e-21

NETI protein; This family includes the B. subtilis YebG protein, which is functionally uncharacterized. This is not a homolog of E. coli YebG, which belongs to pfam07130. This family of proteins is found in bacteria. Proteins in this family are typically between 42 and 66 amino acids in length and contain a conserved NETI motif.


:

Pssm-ID: 433669  Cd Length: 56  Bit Score: 77.36  E-value: 2.58e-21
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 1109749647  2 KFKVADNETITDCLARMKKEGYMPVKRLEKPVFQEQK---DGTIEVSHQEIIFVGK 54
Cdd:pfam14044  1 KFEVEENETIDQCLARMKKEGYMPVRRMEKPVFEEVKengKKEIEPVGQKIVFEGK 56
 
Name Accession Description Interval E-value
NETI pfam14044
NETI protein; This family includes the B. subtilis YebG protein, which is functionally ...
 2-54 2.58e-21

NETI protein; This family includes the B. subtilis YebG protein, which is functionally uncharacterized. This is not a homolog of E. coli YebG, which belongs to pfam07130. This family of proteins is found in bacteria. Proteins in this family are typically between 42 and 66 amino acids in length and contain a conserved NETI motif.


Pssm-ID: 433669  Cd Length: 56  Bit Score: 77.36  E-value: 2.58e-21
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 1109749647  2 KFKVADNETITDCLARMKKEGYMPVKRLEKPVFQEQK---DGTIEVSHQEIIFVGK 54
Cdd:pfam14044  1 KFEVEENETIDQCLARMKKEGYMPVRRMEKPVFEEVKengKKEIEPVGQKIVFEGK 56
 
Name Accession Description Interval E-value
NETI pfam14044
NETI protein; This family includes the B. subtilis YebG protein, which is functionally ...
 2-54 2.58e-21

NETI protein; This family includes the B. subtilis YebG protein, which is functionally uncharacterized. This is not a homolog of E. coli YebG, which belongs to pfam07130. This family of proteins is found in bacteria. Proteins in this family are typically between 42 and 66 amino acids in length and contain a conserved NETI motif.


Pssm-ID: 433669  Cd Length: 56  Bit Score: 77.36  E-value: 2.58e-21
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 1109749647  2 KFKVADNETITDCLARMKKEGYMPVKRLEKPVFQEQK---DGTIEVSHQEIIFVGK 54
Cdd:pfam14044  1 KFEVEENETIDQCLARMKKEGYMPVRRMEKPVFEEVKengKKEIEPVGQKIVFEGK 56
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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