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Conserved domains on  [gi|1195629563|emb|SME17882|]
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hypothetical protein BACERE00176_03020 [Bacillus paranthracis]

Protein Classification

DUF1128 domain-containing protein( domain architecture ID 10008873)

DUF1128 domain-containing protein similar to Bacillus subtilis YfkK

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YfkK COG4840
Uncharacterized conserved protein YfkK, UPF0435 family [Function unknown];
1-74 6.44e-32

Uncharacterized conserved protein YfkK, UPF0435 family [Function unknown];


:

Pssm-ID: 443868  Cd Length: 74  Bit Score: 105.40  E-value: 6.44e-32
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1195629563  1 MDLSVKSEENVEYMVEAIKEKLRMVNAGAMRAASFNEEMYEDLRDIYEHVMKRETFSISEMQAITEELGTLIKK 74
Cdd:COG4840    1 MNLSEPSTENLAYMIEEIKDKLRMVNASAMDPEDFDLEKYEDLKDLYDMVMKKNQFSPSEMQAIAEELGSLRKS 74
 
Name Accession Description Interval E-value
YfkK COG4840
Uncharacterized conserved protein YfkK, UPF0435 family [Function unknown];
1-74 6.44e-32

Uncharacterized conserved protein YfkK, UPF0435 family [Function unknown];


Pssm-ID: 443868  Cd Length: 74  Bit Score: 105.40  E-value: 6.44e-32
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1195629563  1 MDLSVKSEENVEYMVEAIKEKLRMVNAGAMRAASFNEEMYEDLRDIYEHVMKRETFSISEMQAITEELGTLIKK 74
Cdd:COG4840    1 MNLSEPSTENLAYMIEEIKDKLRMVNASAMDPEDFDLEKYEDLKDLYDMVMKKNQFSPSEMQAIAEELGSLRKS 74
DUF1128 pfam06569
Protein of unknown function (DUF1128); This family consists of several short, hypothetical ...
 3-73 6.82e-30

Protein of unknown function (DUF1128); This family consists of several short, hypothetical bacterial proteins of unknown function.


Pssm-ID: 399518  Cd Length: 71  Bit Score: 100.05  E-value: 6.82e-30
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1195629563  3 LSVKSEENVEYMVEAIKEKLRMVNAGAMRAASFNEEMYEDLRDIYEHVMKRETFSISEMQAITEELGTLIK 73
Cdd:pfam06569  1 LSEPSQENLEYMIEEIKEKLNMVNGAAMKPEDFSLDKYEDLKDLYEMVMKKDSFSPSEMQAIVEELGRLRK 71
 
Name Accession Description Interval E-value
YfkK COG4840
Uncharacterized conserved protein YfkK, UPF0435 family [Function unknown];
1-74 6.44e-32

Uncharacterized conserved protein YfkK, UPF0435 family [Function unknown];


Pssm-ID: 443868  Cd Length: 74  Bit Score: 105.40  E-value: 6.44e-32
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1195629563  1 MDLSVKSEENVEYMVEAIKEKLRMVNAGAMRAASFNEEMYEDLRDIYEHVMKRETFSISEMQAITEELGTLIKK 74
Cdd:COG4840    1 MNLSEPSTENLAYMIEEIKDKLRMVNASAMDPEDFDLEKYEDLKDLYDMVMKKNQFSPSEMQAIAEELGSLRKS 74
DUF1128 pfam06569
Protein of unknown function (DUF1128); This family consists of several short, hypothetical ...
 3-73 6.82e-30

Protein of unknown function (DUF1128); This family consists of several short, hypothetical bacterial proteins of unknown function.


Pssm-ID: 399518  Cd Length: 71  Bit Score: 100.05  E-value: 6.82e-30
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1195629563  3 LSVKSEENVEYMVEAIKEKLRMVNAGAMRAASFNEEMYEDLRDIYEHVMKRETFSISEMQAITEELGTLIK 73
Cdd:pfam06569  1 LSEPSQENLEYMIEEIKEKLNMVNGAAMKPEDFSLDKYEDLKDLYEMVMKKDSFSPSEMQAIVEELGRLRK 71
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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