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Conserved domains on  [gi|1440441837|emb|SUQ07620|]
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Protein of uncharacterised function (DUF3624) [Vibrio owensii]

Protein Classification

DUF3624 domain-containing protein( domain architecture ID 10574130)

DUF3624 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3624 pfam12292
Protein of unknown function (DUF3624); This family of proteins is found in bacteria. Proteins ...
 1-78 8.41e-37

Protein of unknown function (DUF3624); This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length. There is a conserved GRC sequence motif.


:

Pssm-ID: 432458  Cd Length: 74  Bit Score: 118.64  E-value: 8.41e-37
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1440441837  1 MACRSCQEHWFWKKIGRCQRCMDQLTVLSVLCWIVWWFAFKDDPQSIESIALIFAGFAFNGLLFLHLwmrfVVLPWQR 78
Cdd:pfam12292  1 MACNDCLSSIFKQKLGRCKRCMWQLTVLSILGWLLWWYFFADTPTSVESIALLFFAFAFSGLLLLHL----VVFAYRR 74
 
Name Accession Description Interval E-value
DUF3624 pfam12292
Protein of unknown function (DUF3624); This family of proteins is found in bacteria. Proteins ...
 1-78 8.41e-37

Protein of unknown function (DUF3624); This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length. There is a conserved GRC sequence motif.


Pssm-ID: 432458  Cd Length: 74  Bit Score: 118.64  E-value: 8.41e-37
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1440441837  1 MACRSCQEHWFWKKIGRCQRCMDQLTVLSVLCWIVWWFAFKDDPQSIESIALIFAGFAFNGLLFLHLwmrfVVLPWQR 78
Cdd:pfam12292  1 MACNDCLSSIFKQKLGRCKRCMWQLTVLSILGWLLWWYFFADTPTSVESIALLFFAFAFSGLLLLHL----VVFAYRR 74
 
Name Accession Description Interval E-value
DUF3624 pfam12292
Protein of unknown function (DUF3624); This family of proteins is found in bacteria. Proteins ...
 1-78 8.41e-37

Protein of unknown function (DUF3624); This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length. There is a conserved GRC sequence motif.


Pssm-ID: 432458  Cd Length: 74  Bit Score: 118.64  E-value: 8.41e-37
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1440441837  1 MACRSCQEHWFWKKIGRCQRCMDQLTVLSVLCWIVWWFAFKDDPQSIESIALIFAGFAFNGLLFLHLwmrfVVLPWQR 78
Cdd:pfam12292  1 MACNDCLSSIFKQKLGRCKRCMWQLTVLSILGWLLWWYFFADTPTSVESIALLFFAFAFSGLLLLHL----VVFAYRR 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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