|
Name |
Accession |
Description |
Interval |
E-value |
| flgL |
PRK08870 |
flagellar hook-associated protein FlgL; Reviewed |
5-398 |
5.25e-74 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 236345 [Multi-domain] Cd Length: 404 Bit Score: 235.96 E-value: 5.25e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 5 RIGTANMYESTINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAERaLTRiSRSENDQ----RVLGLQRdvMAQGE 80
Cdd:PRK08870 2 RISTAQMYQQSVNSMLDQQSQLSQLQQQLSSGKKLLTPSDDPVAAAQAVN-LSQ-QSALLDQytknINLARNR--LQQEE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 81 SKLGTAHDALKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKDSNGLPIFRGLGSKEDPLTNGNPGTNS-- 158
Cdd:PRK08870 78 STLGSVEDLLQRARELVVQAGNGSLSDSDRQAIATELQGLRDQLLNLANSKDGSGNYLFAGTQSGTQPFAFDASGNVVys 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 159 --QLQPGQATGSENGLPLALDGFATWMNVPTGNGVFAVTRQSPTGSSAYADLGTVSDPSAIT-GASYTLNFTkDATTGAL 235
Cdd:PRK08870 158 gdQGQRQVQVADSVQVATNDPGDEVFMSVPNGGGDYVPNANASNTGTGLLGSASITDPSDPVnGDTYTITFT-DNGAGGT 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 236 SYTV--TSGGTTGPAVPYTAGDTITVGGMSMKISGNLATGDSFTLGPSQRTDLFSVLDNVIAGVKN---GATDAGAMQQA 310
Cdd:PRK08870 237 NTYVtdSSTGTVVTAQAYDAGQPINFNGVEVQISGAPAAGDSFTLTPAPQASIFDTLDDAIAALESpvsTPAADAALQNA 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 311 LGRGLNELDAGMSRVQAMRSFAGDQLNRADRLEDDMKNQADQQEAARSRAEDIDMIKALSDVDMQKVGMQAALQSYASIQ 390
Cdd:PRK08870 317 LAQALRNLDNALNNVLTARASVGARLNELDSAEAVHEDNKLQNTSALSDLEDLDYASAISEFELQQAALQAAQQAFSKVQ 396
|
....*...
gi 1592995642 391 KLSLFNFI 398
Cdd:PRK08870 397 SLSLFNYI 404
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
5-398 |
4.58e-43 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 152.50 E-value: 4.58e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 5 RIGTANMYESTINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAERALTRISRSENDQRVLGLQRDVMAQGESKLG 84
Cdd:TIGR02550 1 RVSTNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQKNIDDAKNWLSQTETALS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 85 TAHDALKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKDSNGLPIFrglgskedpltngnPGTNSQLQPgq 164
Cdd:TIGR02550 81 SVGDVLQRARELAVQAANGTLSDDDRKAIAKEIKQLLDQLVNLANTKDGNGRYIF--------------SGTKTDTPP-- 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 165 atgsenglplaldgfatwmnvptgngvfavtrqsptgssayadlgtvsdpsaitgasytlnFTKDaTTGALSYTvtsGGT 244
Cdd:TIGR02550 145 -------------------------------------------------------------FSED-EGGEVTYN---GDG 159
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 245 TGPAVPYTAGDTITVGGMSMKIsgnlatgdsFTLGPSQRTDLFSVLDNVIAGVKN--GATDAGAMQQALGRGLNELDAGM 322
Cdd:TIGR02550 160 GQRKVQVASNRSMPIGHPGDKV---------FMSIPNNDKSVFSTGDDLIDALKKleDALSSGDAKAALSASLNDLDKAL 230
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1592995642 323 SRVQAMRSFAGDQLNRADRLEDDMKNQADQQEAARSRAEDIDMIKALSDVDMQKVGMQAALQSYASIQKLSLFNFI 398
Cdd:TIGR02550 231 DNVLSARAEVGARLNRLENLNSRLSEQKLQLTEQLSDLEDVDLAEAISDLNMQQAALQAALKTFAKIQQLSLFDYL 306
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
4-399 |
9.56e-34 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 125.75 E-value: 9.56e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 4 SRIGTANMYESTINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAERALTRISRSENDQRVLGLQRDVMAQGESKL 83
Cdd:COG1344 1 MRISTNMSALNALRNLNRTQSDLAKLQEQLSSGKRINSASDDPAGAAIALRLRSQIRGLEQYQRNANDAISRLQTAEGAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 84 GTAHDALKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKDSNGLPIFRGLGSKEDPLTNGNPGtnsqlqpg 163
Cdd:COG1344 81 GEITDILQRARELAVQAANGTLSDEDRAAIAAELEQLLDQLLSIANTTDFNGRYLFAGTATDTPPFQVDYQG-------- 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 164 qatgsenglplaldgfatwmnvptgngvfavtrqsptgssayadlgtvsdpsaitgasytlnftkdattgalsytvtsgg 243
Cdd:COG1344 --------------------------------------------------------------------------------
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 244 ttgpavpytagdtitvggmsmkisgnlatgdsftlgpsqrtdlfsvldnviagvkngatDAGAMQQALGrglnELDAGMS 323
Cdd:COG1344 153 -----------------------------------------------------------DAGQRTAALG----ALDAALD 169
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1592995642 324 RVQAMRSFAGDQLNRADRLEDDMKNQADQQEAARSRAEDIDMIKALSDVDMQKVGMQAALQSYASIQKLSLFNFIN 399
Cdd:COG1344 170 NVSSARAELGARQNRLESAINNLSDLSENLTAALSRLEDADMAEAITRLTKLQTLLQAALAALAQANQLSLLDLLR 245
|
|
| Flagellin_N |
pfam00669 |
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial ... |
6-144 |
1.21e-12 |
|
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425809 [Multi-domain] Cd Length: 139 Bit Score: 64.67 E-value: 1.21e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 6 IGTANMYESTINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAERALTRISRSENDQRVLGLQRDVMAQGESKLGT 85
Cdd:pfam00669 1 INTNSAALAARSNLNKNQAELSKAQERLSTGLRINSALDDAAGLAISVSLRAQIAGLSQAVRNNSLGIGRLQTAQGALSE 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1592995642 86 AHDALKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKDSNGLPIFRGLGS 144
Cdd:pfam00669 81 VTDILQRMKELAVQASNGGNSDIDRASIQAEIQQLTDELNNIANTTSFNGEYLLAGINT 139
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| flgL |
PRK08870 |
flagellar hook-associated protein FlgL; Reviewed |
5-398 |
5.25e-74 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 236345 [Multi-domain] Cd Length: 404 Bit Score: 235.96 E-value: 5.25e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 5 RIGTANMYESTINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAERaLTRiSRSENDQ----RVLGLQRdvMAQGE 80
Cdd:PRK08870 2 RISTAQMYQQSVNSMLDQQSQLSQLQQQLSSGKKLLTPSDDPVAAAQAVN-LSQ-QSALLDQytknINLARNR--LQQEE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 81 SKLGTAHDALKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKDSNGLPIFRGLGSKEDPLTNGNPGTNS-- 158
Cdd:PRK08870 78 STLGSVEDLLQRARELVVQAGNGSLSDSDRQAIATELQGLRDQLLNLANSKDGSGNYLFAGTQSGTQPFAFDASGNVVys 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 159 --QLQPGQATGSENGLPLALDGFATWMNVPTGNGVFAVTRQSPTGSSAYADLGTVSDPSAIT-GASYTLNFTkDATTGAL 235
Cdd:PRK08870 158 gdQGQRQVQVADSVQVATNDPGDEVFMSVPNGGGDYVPNANASNTGTGLLGSASITDPSDPVnGDTYTITFT-DNGAGGT 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 236 SYTV--TSGGTTGPAVPYTAGDTITVGGMSMKISGNLATGDSFTLGPSQRTDLFSVLDNVIAGVKN---GATDAGAMQQA 310
Cdd:PRK08870 237 NTYVtdSSTGTVVTAQAYDAGQPINFNGVEVQISGAPAAGDSFTLTPAPQASIFDTLDDAIAALESpvsTPAADAALQNA 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 311 LGRGLNELDAGMSRVQAMRSFAGDQLNRADRLEDDMKNQADQQEAARSRAEDIDMIKALSDVDMQKVGMQAALQSYASIQ 390
Cdd:PRK08870 317 LAQALRNLDNALNNVLTARASVGARLNELDSAEAVHEDNKLQNTSALSDLEDLDYASAISEFELQQAALQAAQQAFSKVQ 396
|
....*...
gi 1592995642 391 KLSLFNFI 398
Cdd:PRK08870 397 SLSLFNYI 404
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
5-398 |
4.58e-43 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 152.50 E-value: 4.58e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 5 RIGTANMYESTINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAERALTRISRSENDQRVLGLQRDVMAQGESKLG 84
Cdd:TIGR02550 1 RVSTNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQKNIDDAKNWLSQTETALS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 85 TAHDALKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKDSNGLPIFrglgskedpltngnPGTNSQLQPgq 164
Cdd:TIGR02550 81 SVGDVLQRARELAVQAANGTLSDDDRKAIAKEIKQLLDQLVNLANTKDGNGRYIF--------------SGTKTDTPP-- 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 165 atgsenglplaldgfatwmnvptgngvfavtrqsptgssayadlgtvsdpsaitgasytlnFTKDaTTGALSYTvtsGGT 244
Cdd:TIGR02550 145 -------------------------------------------------------------FSED-EGGEVTYN---GDG 159
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 245 TGPAVPYTAGDTITVGGMSMKIsgnlatgdsFTLGPSQRTDLFSVLDNVIAGVKN--GATDAGAMQQALGRGLNELDAGM 322
Cdd:TIGR02550 160 GQRKVQVASNRSMPIGHPGDKV---------FMSIPNNDKSVFSTGDDLIDALKKleDALSSGDAKAALSASLNDLDKAL 230
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1592995642 323 SRVQAMRSFAGDQLNRADRLEDDMKNQADQQEAARSRAEDIDMIKALSDVDMQKVGMQAALQSYASIQKLSLFNFI 398
Cdd:TIGR02550 231 DNVLSARAEVGARLNRLENLNSRLSEQKLQLTEQLSDLEDVDLAEAISDLNMQQAALQAALKTFAKIQQLSLFDYL 306
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
4-399 |
9.56e-34 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 125.75 E-value: 9.56e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 4 SRIGTANMYESTINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAERALTRISRSENDQRVLGLQRDVMAQGESKL 83
Cdd:COG1344 1 MRISTNMSALNALRNLNRTQSDLAKLQEQLSSGKRINSASDDPAGAAIALRLRSQIRGLEQYQRNANDAISRLQTAEGAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 84 GTAHDALKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKDSNGLPIFRGLGSKEDPLTNGNPGtnsqlqpg 163
Cdd:COG1344 81 GEITDILQRARELAVQAANGTLSDEDRAAIAAELEQLLDQLLSIANTTDFNGRYLFAGTATDTPPFQVDYQG-------- 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 164 qatgsenglplaldgfatwmnvptgngvfavtrqsptgssayadlgtvsdpsaitgasytlnftkdattgalsytvtsgg 243
Cdd:COG1344 --------------------------------------------------------------------------------
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 244 ttgpavpytagdtitvggmsmkisgnlatgdsftlgpsqrtdlfsvldnviagvkngatDAGAMQQALGrglnELDAGMS 323
Cdd:COG1344 153 -----------------------------------------------------------DAGQRTAALG----ALDAALD 169
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1592995642 324 RVQAMRSFAGDQLNRADRLEDDMKNQADQQEAARSRAEDIDMIKALSDVDMQKVGMQAALQSYASIQKLSLFNFIN 399
Cdd:COG1344 170 NVSSARAELGARQNRLESAINNLSDLSENLTAALSRLEDADMAEAITRLTKLQTLLQAALAALAQANQLSLLDLLR 245
|
|
| flgL |
PRK07192 |
flagellar hook-associated protein FlgL; Reviewed |
5-398 |
3.65e-29 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 235956 [Multi-domain] Cd Length: 305 Bit Score: 115.11 E-value: 3.65e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 5 RIGTANMYESTINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQaeraLTRISRSE--NDQRVLGLQR--DVMAQGE 80
Cdd:PRK07192 2 RISTNTLYSTMLRSIQQLQAGLGKLQQQMSTGKRILTPSDDPIASAR----LLELSREQsnNSQYADNIANlsNSLNNQE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 81 SKLGTAHDALKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKDSNglpifrglgskedpltngnpgtnsql 160
Cdd:PRK07192 78 GHLSGVNDQLQSIRSLLVAAGNGSLSDEDRSAMATELRSMLDSLLGLANAKDSE-------------------------- 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 161 qpgqatgsenglplaldgfatwmnvptGNGVFAvtrqsptgssayadlGTVSDpsaitgasyTLNFTKDATTGALSYTVT 240
Cdd:PRK07192 132 ---------------------------GNYLFS---------------GTASN---------TQPITFDAAGGTYTYNGN 160
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 241 SGGTtgpavpytagdTITVGGmSMKISGNLATGDSFTLGPSqrtDLFSVLDNVIAGVKNGATDAG--AMQQALGRGLNEL 318
Cdd:PRK07192 161 SDQR-----------QVQVGE-GVQMPVNVTGQSVFQGGGL---DVFNTLDKLIDLLETPALPAAdaALTAAVDEALGAI 225
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 319 DAGMSRVQAMRSFAGDQLNRADRLE---DDMKNQADQQEaarSRAEDIDMIKALSDVDMQKVGMQAALQSYASIQKLSLF 395
Cdd:PRK07192 226 DDALDNVLTVRTELGSRQNELDLLDgnhEDRKLQYQKIL---SDLQDLDYAEALSDLSNQMAALEAAQKTFVKINSLSLF 302
|
...
gi 1592995642 396 NFI 398
Cdd:PRK07192 303 NLI 305
|
|
| flgL |
PRK07701 |
flagellar hook-associated protein FlgL; Validated |
8-397 |
3.97e-23 |
|
flagellar hook-associated protein FlgL; Validated
Pssm-ID: 181087 [Multi-domain] Cd Length: 298 Bit Score: 98.14 E-value: 3.97e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 8 TANMYEST-INNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAERALTRISRSENDQRVLGLQRDVMAQGESKLGTA 86
Cdd:PRK07701 4 TQNMLANNfLRNINSNLEKLDKYQEQLSTGKKITRPSDDPVVAMKSLRYRTDLAEVEQYQKNASDAKSWLENTESALDQA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 87 HDALKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKdSNGLPIFRglgskedpltngnpGTNSQLQPgqat 166
Cdd:PRK07701 84 TDILQRARELAVQAANGTNTQTDRQAIAQEIEQLKEQLIQIANTQ-YNGRYIFN--------------GTKTDTPP---- 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 167 gsenglplaldgfatwmnvptgngvfavtrqsptgssayadlgtvsdpsaitgasytlnFTKDAttgalSYTVTSGGTTG 246
Cdd:PRK07701 145 -----------------------------------------------------------VTDDG-----DNIENSTDSGD 160
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 247 PAVPYTAGDTITVggmsmkisgNLATGDSFTLGPSQRTDLFSVLDNVIAGVKNGATdagamqQALGRGLNELDAGMSRVQ 326
Cdd:PRK07701 161 IEFEIAKGNTINV---------NVPGDKAFGGQSGGGSNLFEMLDNLENALDSGDT------QGVSNLLSDIDQHIDNVL 225
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1592995642 327 AMRSFAGDQLNRADRLEDDMKNQADQQEAARSRAEDIDMIKALSDVDMQKVGMQAALQSYASIQKLSLFNF 397
Cdd:PRK07701 226 AVRAELGARSNRLELIENRLSDQEVNATKLLSDNEDVDLAEVITDLKTQENVYRAALAVGARIIQPSLVDF 296
|
|
| flgL |
PRK12717 |
flagellar hook-associated protein 3; |
5-398 |
2.26e-22 |
|
flagellar hook-associated protein 3;
Pssm-ID: 171679 [Multi-domain] Cd Length: 523 Bit Score: 98.66 E-value: 2.26e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 5 RIGTANMYESTINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAA------QAERALTRISRSendqrvLGLQRDVMAQ 78
Cdd:PRK12717 2 RISTSQFYESSAANYQRNYSNLVKTQEQASSGIRIQTAADDPVGAArllqlqQQQAMLDQYSGN------ITTIKNSLTQ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 79 GESKLGTAHDALKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKDSNGLPIFRGLGSKEDPLTNGNPGTNS 158
Cdd:PRK12717 76 EESTLTSINDTLQRARELAVSAGNGGLTDADRKAIASELKQIEAQLLGLMNSKDANGQYLFAGSKSDTPPYVRNADGTYS 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 159 ----QLQPGQATGSENGLPLALDGFATWMNV-------------PTGNGVFAVTRQSPTGSSAYAD-------------- 207
Cdd:PRK12717 156 yqgdQTQLSLQVGDTLNLAANDTGYSAFEQAvntsrtqttltspATDDGRVGLSNGLVTSSVTYNAqfragepytltfts 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 208 ------------------------------------------------LGTVSDPSA-ITGASYTLNFTKDATTGALS-- 236
Cdd:PRK12717 236 gtqfkitdasgndvtseasgggkfdpgteggqtisfrgvdlelnvnlkAGSGADADAaLAGHSFTLQSKPDTFTATRSpg 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 237 ----YTVTSGGTTGPAV-------------------------PYTA-----------GDTITVGGMSMKISGNLATGDSF 276
Cdd:PRK12717 316 ntstAQVTGATITDPAAynstfpssgavlkftsatayelyaqPVTAdskpissgtltGNTATAAGVTFTLSGTPAAGDQF 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 277 TLGP-SQRTDlfSVLDNVIAGVKNGAT----DAGAMQQ---ALGRGLNELDAGMSRVQAMRSFAGDQLNRADRLEDDMKN 348
Cdd:PRK12717 396 SVQAnTHQTQ--NILDTLSQLRKALSTptdgDPAARQAlraALASALGNLASAIDQVDTARSSIGARGNALDIQGTTNES 473
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 1592995642 349 QADQQEAARSRAEDIDMIKALSDVDMQKVGMQAALQSYASIQKLSLFNFI 398
Cdd:PRK12717 474 LSLANTTTQSSIRDSDPAEATTRLTLQQTMLEASQLAFVKISQLSLFNQL 523
|
|
| PRK06663 |
PRK06663 |
flagellar hook-associated protein 3; |
3-398 |
2.03e-20 |
|
flagellar hook-associated protein 3;
Pssm-ID: 180648 [Multi-domain] Cd Length: 419 Bit Score: 92.44 E-value: 2.03e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 3 ISRIGTANMYESTINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAERALTRISRSENDQRVLGLQRDVMAQGESK 82
Cdd:PRK06663 1 IMRVSHPMQYNNLKSSLRRQESKMTKLQNQLSTGQRIQKLRDDPTAATHSIRYKSRLFKLDRYQKNIDDGKDRLRYAEGY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 83 LGTAHDALKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKDSNGLPIFRGLGSKEDPL--TNGNPGTNSQL 160
Cdd:PRK06663 81 LQSITNILQRARELAVQGANGTYQADDKKKIAKEIDELLEDLVDIANARGADGYSIFSGTKIDTEPFevIRGNIKGLQGD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 161 --------------QPGQATGSENG--LPLALDG----FATWMNVPTG--NGVFAVTRQS-----------PTGSSAYAD 207
Cdd:PRK06663 161 agsnqiigveyngdIGEQNREIENGiyIPVNYPGnkvfWGTNQSIISSvdASGYVVKEDQkiyidgveihlSAGDTIDDI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 208 LGTVSDPSAITGASYtlnftkDATTGALSYTVTSggttgpavPYTAGDTITVGGMSMKISGnLATGDS----FTLGPSQR 283
Cdd:PRK06663 241 IAKINDSSAPVKASL------DPVLNSISLKTTT--------PHQIWLEDEEGGTVLQDLG-LITNATkeppYNYSNSAE 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 284 TDLFSVLDNVIAgVKNgATDAGAMQQALGRGLNELDAGMSRVQAMRSFAGDQLNRADRLEDDMKNQADQQEAARSRAEDI 363
Cdd:PRK06663 306 VSGRSIFDSLIQ-LRD-ALLNNDQELIGGRALGEIDEALDNLLTTLADLGAKENRLDRSYARISKEKLDMTEALSKNEDI 383
|
410 420 430
....*....|....*....|....*....|....*
gi 1592995642 364 DMIKALSDVDMQKVGMQAALQSYASIQKLSLFNFI 398
Cdd:PRK06663 384 DVTEAITNLNMLELAHQASLGVSGKIMQPTLLDFL 418
|
|
| flgL |
PRK12718 |
flagellar hook-associated protein FlgL; Provisional |
5-396 |
6.80e-20 |
|
flagellar hook-associated protein FlgL; Provisional
Pssm-ID: 79176 [Multi-domain] Cd Length: 510 Bit Score: 91.41 E-value: 6.80e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 5 RIGTANMYESTINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAERALTRISRSENDQRVLGLQRDVMAQGESKLG 84
Cdd:PRK12718 2 RLSTALIYQNGLNGVLNQEAAMARLQEQLSSGRRVLTPADDPLAAALAVNVSQTSSMNSNYDANRKQAEQALGAQTNTLQ 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 85 TAHDALKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKDSNGLPIFRGLGSKEDPLT----------NGNP 154
Cdd:PRK12718 82 SVVKNMQEMLKRVVEAGNGTMSDADRQALVIALKGAREELVGLANATDGNGQYLFSGYKGFTQPYSfdaatgkvtyNGDL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 155 GT------NSQLQPGQATGS------------------------------------------------------------ 168
Cdd:PRK12718 162 GQrgiqvdQSRLMSGGDVGSdifnsvtsgtlayiadagagnagtgqysavsfdgpragnyvgrdfrieftrdavtdelqy 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 169 -----------ENGLPLAL---DGFATWMN--------VPTGNGVFAVTR--------QSPTGSSAYADLGTVSDPSAIT 218
Cdd:PRK12718 242 svlsdppvvppEQPLPANMpysEGSVIDMNgvsiklsgQPEAGDVFTVETpkswkmgvQGDAANTGSATLTPVSLPDGLT 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 219 GASYTLNFTKDATTGAL-SYTVTSGGTTGPA-VPYTAGDTITVGGMSMKISGNLATGDSF--TLGPSQRTDLFSVLDNVI 294
Cdd:PRK12718 322 GKNLSVAFLDDGAGGLLySVTSTPPDPSLPAnVPVKPGDVIDIGGLKVKVDGQPAAGDTYavTTPKSANVDVFDTLNDLI 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 295 AG----VKNGATDAGAMQQALGRGLNELDAGMSRVQAMRSFAGDQLNRADRLEDDMKNQADQQEAARSRAEDIDMIKALS 370
Cdd:PRK12718 402 GAldtpISGDPQAAAALANTLATANKKLNLSLDNVLTVQASVGARLNELEALGNTGAQKGLSYVKQLSDLEDVNIYQATS 481
|
490 500
....*....|....*....|....*.
gi 1592995642 371 DVDMQKVGMQAALQSYASIQKLSLFN 396
Cdd:PRK12718 482 DLLLRQVALQAASLALQRIQGNSLFS 507
|
|
| flgL |
PRK08027 |
flagellar hook-filament junction protein FlgL; |
5-395 |
3.39e-16 |
|
flagellar hook-filament junction protein FlgL;
Pssm-ID: 181202 [Multi-domain] Cd Length: 317 Bit Score: 78.64 E-value: 3.39e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 5 RIGTANMYESTINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAerALTRISRSENDQRVLG--LQRDVMAQGESK 82
Cdd:PRK08027 2 RLSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQA--VVLSQAQAQNSQYTLArtFATQKVSLEESV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 83 LGTAHDALKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKDSNGLPIFRGLGSKEDPLTngnpgtnsqlqp 162
Cdd:PRK08027 80 LSQVTTAIQNAQEKIVYAGNGTLSDDDRASLATDLQGLRDQLLNLANTTDGNGRYIFAGYKTDKAPFD------------ 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 163 gQATGSENGlplaldgfatwmnvptgnGVFAVTRQSPTGSSAYAdlgtvsdpsaitgasytlnftkdATTGALSYTvtsg 242
Cdd:PRK08027 148 -EATGGYVG------------------GTESITQQVDAARSMVI-----------------------GHTGDQIFD---- 181
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 243 GTTGPAVPYTAGDTItvggmsmkisgnlatgdsftlgpsqRTDLFSVLDNVIAGVK-----NGATDAGAMqQALGRGLNE 317
Cdd:PRK08027 182 SITSNAVPEPDGSAS-------------------------ETNLFAMLDSAIAALKtpvagSDADKETAA-AALDKTNRG 235
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1592995642 318 LDAGMSRVQAMRSFAGDQLNRADRLEDDMKNQADQQEAARSRAEDIDMIKALSDVDMQKVGMQAALQSYASIQKLSLF 395
Cdd:PRK08027 236 LKNSLNNVLTVRAELGTQLNELESLDSLGSDRALGQKQQMSDLVDVDWNSAISSYVMQQAALQASYKAFTDMQGMSLF 313
|
|
| Flagellin_N |
pfam00669 |
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial ... |
6-144 |
1.21e-12 |
|
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425809 [Multi-domain] Cd Length: 139 Bit Score: 64.67 E-value: 1.21e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 6 IGTANMYESTINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAERALTRISRSENDQRVLGLQRDVMAQGESKLGT 85
Cdd:pfam00669 1 INTNSAALAARSNLNKNQAELSKAQERLSTGLRINSALDDAAGLAISVSLRAQIAGLSQAVRNNSLGIGRLQTAQGALSE 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1592995642 86 AHDALKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKDSNGLPIFRGLGS 144
Cdd:pfam00669 81 VTDILQRMKELAVQASNGGNSDIDRASIQAEIQQLTDELNNIANTTSFNGEYLLAGINT 139
|
|
| flgL |
PRK08073 |
flagellar hook-associated protein 3; |
5-150 |
5.61e-10 |
|
flagellar hook-associated protein 3;
Pssm-ID: 181222 [Multi-domain] Cd Length: 287 Bit Score: 60.00 E-value: 5.61e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 5 RIGTANMYESTINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAERALTRISRSENDQRVLGLQRDVMAQGESKLG 84
Cdd:PRK08073 2 RVSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLSMSEDPLAASKSFAIQHSLANIEQMQKDVADSKNVLNQTENTLS 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1592995642 85 TAHDALKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKDsNGLPIFRGLGSKEDPLT 150
Cdd:PRK08073 82 GMSKSLTRVDQLVLQALNGTNDEKELKAIGAEIDQILKQVVYLANTKE-QGRYVFGGDSAEKKPFT 146
|
|
| PRK06819 |
PRK06819 |
FliC/FljB family flagellin; |
15-364 |
2.44e-09 |
|
FliC/FljB family flagellin;
Pssm-ID: 235867 [Multi-domain] Cd Length: 376 Bit Score: 58.64 E-value: 2.44e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 15 TINNLNSRNTSLVDLMEKTTSGKRVVRASDDpvAAAQA--------ERALTRISRSENDqrvlGLQrdvMAQ-GESKLGT 85
Cdd:PRK06819 14 TQNNLNKSQSSLGTAIERLSSGLRINSAKDD--AAGQAianrftsnIKGLTQAARNAND----GIS---IAQtTEGALNE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 86 AHDALKDFRDLILQSGNGS---YDQKA-RDALVQQLESIrNQVlsyANAKDSNGLPIFRglgskEDPLTNGNPGTNSQLQ 161
Cdd:PRK06819 85 INNNLQRVRELTVQAQNGSnssSDLDSiQDEISQRLAEI-DRV---SDQTQFNGVKVLA-----EDTTMSIQVGANDGET 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 162 PGQATGSENGLPLALDGFATWMNVPTGNGVFAVTRQSPTGSSAYaDLGTVSDPSAITGASYtlnftkDATTGALSYTVTS 241
Cdd:PRK06819 156 IDINLQKIDSKSLGLGSFSVSGVSGALTSLTFTDTALDTSVTGV-TTTTALDFSDISTFAK------GATVHGIGDVGTD 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 242 GGTTGPAVPYTAGDTITVGGMSMKiSGNLATGDsfTLGPSQRTDlfsvldnviAGVKNGATDAGAMQQALGRGLNELDAG 321
Cdd:PRK06819 229 GAYADGYVIRTTDGKQYKGEVDAT-NGKVTFAD--DANGDPITD---------ATKLEAAAQFSPAGKATASPLETLDDA 296
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1592995642 322 MSRVQAMRSFAGDQLNRADRLEDDMKNQADQQEAARSRAEDID 364
Cdd:PRK06819 297 LKQVDGLRSSLGAVQNRFESTVTNLNNTVTNLSSARSRIEDAD 339
|
|
| flgK |
PRK06945 |
flagellar hook-associated protein FlgK; Validated |
200-280 |
3.08e-07 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 235895 [Multi-domain] Cd Length: 651 Bit Score: 52.33 E-value: 3.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 200 TGSSAYAdLGTVSdpSAITGASYTLNFTKDATTGALS-------YTVTSGGTT-------GPAVPYTAGDTITV--GGMS 263
Cdd:PRK06945 449 TGTGAIS-QGSVS--SGYPLPSGTTTLTYDAATGTLSgfpagttVTVAGTPPTsvtitpaTTPVPYTSGAGISLvfNGVS 525
|
90
....*....|....*..
gi 1592995642 264 MKISGNLATGDSFTLGP 280
Cdd:PRK06945 526 VTLSGTPADGDTFTIGP 542
|
|
| PRK12804 |
PRK12804 |
flagellin; Provisional |
14-152 |
4.49e-05 |
|
flagellin; Provisional
Pssm-ID: 183759 [Multi-domain] Cd Length: 301 Bit Score: 44.99 E-value: 4.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 14 STINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAERALTRIS----RSENDQRVLGLqrdvMAQGESKLGTAHDA 89
Cdd:PRK12804 11 NTLNRLSANNGASQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRglemASKNAQDGISL----IQTAEGALTETHSI 86
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1592995642 90 LKDFRDLILQSGN-GSYDQKARDALVQQLESIRNQVLSYANAKDSNGLPIFRGLGSKEDPLTNG 152
Cdd:PRK12804 87 LQRVRELVVQAGNtGTQDGTDLGAIQDEIKALVDEIDGISDRTEFNGKKLLDGTFKPAAPAAGT 150
|
|
| flgK |
PRK06945 |
flagellar hook-associated protein FlgK; Validated |
210-282 |
1.58e-04 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 235895 [Multi-domain] Cd Length: 651 Bit Score: 43.85 E-value: 1.58e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1592995642 210 TVSDPSAITGASYTLNFtkDATTgalsYTVT---SGGTTGPAVPYTAGDTITVGGMSMKISGNLATGDSFTLGPSQ 282
Cdd:PRK06945 349 SITNASALTTSDYTLSY--DGTN----YTLTrlsDGSVVGTATSLPTPPPTTIDGLSLSLSGTMNAGDSFLVQPTR 418
|
|
| PRK12802 |
PRK12802 |
flagellin; Provisional |
17-241 |
2.26e-04 |
|
flagellin; Provisional
Pssm-ID: 139237 [Multi-domain] Cd Length: 282 Bit Score: 42.56 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 17 NNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAE------RALTRISRSENDqrvlGLQrdvMAQ-GESKLGTAHDA 89
Cdd:PRK12802 16 KNLSRASDALSTSMTRLSSGLKINSAKDDAAGLQIATrqtsqiRGQTQAIKNAND----GIS---IAQtAEGALQESTNI 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 90 LKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKDSNGlpifrglgskeDPLTNGNPGTNSqLQPGQATGSE 169
Cdd:PRK12802 89 LQRMRELAVQSRNDSNDSTDRAALNKEFTTMLDEITRIATSTTLNG-----------KNLLDGSAGTMT-FQVGANTGQS 156
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1592995642 170 NGLPLALDGFATwmnvPTGNGVFAVTRQSPTGSSAyADLGTVSDPSAITGASYTLNfTKDATTGALSYTVTS 241
Cdd:PRK12802 157 NQITFGLSASFD----ATGLGVGSGTLITGADSAA-AETNAQAAITAIDAALQTIN-TTRADLGAAQNRLQS 222
|
|
| PRK12803 |
PRK12803 |
flagellin; Provisional |
8-147 |
3.90e-04 |
|
flagellin; Provisional
Pssm-ID: 183758 [Multi-domain] Cd Length: 335 Bit Score: 42.10 E-value: 3.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 8 TANMYESTINNLNSRNTSlvDLMEKTTSGKRVVRASDDPVAAAQAERALTRISRSENDQRVLGLQRDVMAQGESKLGTAH 87
Cdd:PRK12803 7 TSAINASRNNSINAANLS--KTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVE 84
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 88 DALKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKDSNGLPIFRGLGSKED 147
Cdd:PRK12803 85 KVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSAAQN 144
|
|
| flgL |
PRK08412 |
flagellar hook-associated protein FlgL; Validated |
5-178 |
1.05e-03 |
|
flagellar hook-associated protein FlgL; Validated
Pssm-ID: 236261 [Multi-domain] Cd Length: 827 Bit Score: 41.35 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 5 RIGTANMYESTINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAER------ALTRISRSENDQRVLGLQRDVMAQ 78
Cdd:PRK08412 2 RVTFGSKYNQMNNYQNALQNKLNDVNTQIASGLKIQYGYQDSDVYNQNLKlqyeenTLDQGIDVASSAYTFTLNTDKALN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 79 GESKlgtahdALKDFRDLILQSGNGSYDQKARDALVQQLESIRNQVLSYANAKdSNGLPIFRGLGSKEDPL-TNGN-PGT 156
Cdd:PRK08412 82 EFSK------TMEAFKTKLIQAANDVHSETSREAIANDLEALKEHMINLANTS-IGGEFLFSGSKVDTKPIdSNGTyHGN 154
|
170 180
....*....|....*....|..
gi 1592995642 157 NSQLQpgQATGSENGLPLALDG 178
Cdd:PRK08412 155 DEDLN--ALVGSGNLVPYNISG 174
|
|
| PRK12806 |
PRK12806 |
flagellin; Provisional |
18-275 |
1.83e-03 |
|
flagellin; Provisional
Pssm-ID: 183761 [Multi-domain] Cd Length: 475 Bit Score: 40.44 E-value: 1.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 18 NLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAERALTRISRSENDQRVLGLQRDVMAQGESKLGTAHDALKDFRDLI 97
Cdd:PRK12806 17 NLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLAQVAEGAMQETTNILQRMRELS 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 98 LQSGNGSYDQKARDALVQQLESIRNQVLSYANAKDSNGLPIFRG--------LGSKEDPLTN---GNPGTNSQLQPGQAT 166
Cdd:PRK12806 97 VQAANSTNNSSDRASIQSEISQLKSELERIAQNTEFNGQRILDGsfsgasfqVGANSNQTINfsiGSIKASSIGGIATAT 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 167 GSEnglplALDGFATWMNVPTGNGvfavtrqSPTGSSAYADLGTVSDPSAITGASYTLNFTKDATTGALSYTVTSGGT-T 245
Cdd:PRK12806 177 GTE-----VAGAAATDITIAIGGG-------AATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTSGTqA 244
|
250 260 270
....*....|....*....|....*....|..
gi 1592995642 246 GPAVPYTAGDT--ITVGGMSMKISGNLATGDS 275
Cdd:PRK12806 245 VGAIGGTAGDTynLTINGVAIYTNLDVATALT 276
|
|
| PRK08026 |
PRK08026 |
FliC/FljB family flagellin; |
170-364 |
2.09e-03 |
|
FliC/FljB family flagellin;
Pssm-ID: 236140 [Multi-domain] Cd Length: 529 Bit Score: 40.11 E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 170 NGLPLALDGFATwmnvPTGNGVFAVTRQSPTGSSAYADLGTVSDPSAITGASYTLNFTKDATTGALSYTVTSGGTT---- 245
Cdd:PRK08026 287 GGSALYIDATGN----LTTNNAGAATKATLDALKKTASEGAATAKAALAAAGVTVADGVTAKTVKMSYTDKNGKVIdggy 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 246 ---GPAVPYTAGDTITVGGMSMKISGNLATGDSFTLGPSQ------RTDLFSVLDNVIAGVK-NGATDAGAMQQALGRGL 315
Cdd:PRK08026 363 avkTGDDYYAADYDEITGAISATTTYYTAKDGTTKTAANKlggadgKTEVVTIDGKTYVASDgKQTTLAEAAATTTENPL 442
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1592995642 316 NELDAGMSRVQAMRSFAGDQLNRADRLEDDMKNQADQQEAARSRAEDID 364
Cdd:PRK08026 443 AALDAAIASIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDAD 491
|
|
| PRK08869 |
PRK08869 |
polar flagellin E; |
18-113 |
6.88e-03 |
|
polar flagellin E;
Pssm-ID: 236344 [Multi-domain] Cd Length: 376 Bit Score: 38.37 E-value: 6.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1592995642 18 NLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAERALTRIS------RSENDqrvlGLQrdvMAQ-GESKLGTAHDAL 90
Cdd:PRK08869 16 NLNGATSALSQSMERLSSGKRINSAKDDAAGLQISNRLTTQIRgldvavRNAND----GIS---IAQtAEGAMNETTNIL 88
|
90 100
....*....|....*....|...
gi 1592995642 91 KDFRDLILQSGNGSYDQKARDAL 113
Cdd:PRK08869 89 QRMRDLSLQSANGSNSASDRQAL 111
|
|
| |
