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Conserved domains on  [gi|1596947128|gb|TDW03002|]
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hypothetical protein EDB45_12821 [Vibrio crassostreae]

Protein Classification

DUF2971 domain-containing protein( domain architecture ID 10567733)

DUF2971 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2971 pfam11185
Protein of unknown function (DUF2971); This bacterial family of proteins has no known function.
 109-197 2.09e-08

Protein of unknown function (DUF2971); This bacterial family of proteins has no known function.


:

Pssm-ID: 463238  Cd Length: 89  Bit Score: 50.65  E-value: 2.09e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1596947128 109 MWAHYADNHKGCLIEFDSDFLPALgSSQDVIVDVDSGAVTYSSVPLDAGI--IAKLLIDEQGSELVIEQKTVLPHLLyKS 186
Cdd:pfam11185   1 MWRHYGDNHTGVAIGFDKDKLKKI-INEENFELSKKSEVIYDDEEQEITIklILLKAIELEKGALKELKLNNVEEEE-KH 78

                          90
                  ....*....|.
gi 1596947128 187 LEWAYEEEIRL 197
Cdd:pfam11185  79 PAFSYEKEWRL 89
 
Name Accession Description Interval E-value
DUF2971 pfam11185
Protein of unknown function (DUF2971); This bacterial family of proteins has no known function.
 109-197 2.09e-08

Protein of unknown function (DUF2971); This bacterial family of proteins has no known function.


Pssm-ID: 463238  Cd Length: 89  Bit Score: 50.65  E-value: 2.09e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1596947128 109 MWAHYADNHKGCLIEFDSDFLPALgSSQDVIVDVDSGAVTYSSVPLDAGI--IAKLLIDEQGSELVIEQKTVLPHLLyKS 186
Cdd:pfam11185   1 MWRHYGDNHTGVAIGFDKDKLKKI-INEENFELSKKSEVIYDDEEQEITIklILLKAIELEKGALKELKLNNVEEEE-KH 78

                          90
                  ....*....|.
gi 1596947128 187 LEWAYEEEIRL 197
Cdd:pfam11185  79 PAFSYEKEWRL 89
 
Name Accession Description Interval E-value
DUF2971 pfam11185
Protein of unknown function (DUF2971); This bacterial family of proteins has no known function.
 109-197 2.09e-08

Protein of unknown function (DUF2971); This bacterial family of proteins has no known function.


Pssm-ID: 463238  Cd Length: 89  Bit Score: 50.65  E-value: 2.09e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1596947128 109 MWAHYADNHKGCLIEFDSDFLPALgSSQDVIVDVDSGAVTYSSVPLDAGI--IAKLLIDEQGSELVIEQKTVLPHLLyKS 186
Cdd:pfam11185   1 MWRHYGDNHTGVAIGFDKDKLKKI-INEENFELSKKSEVIYDDEEQEITIklILLKAIELEKGALKELKLNNVEEEE-KH 78

                          90
                  ....*....|.
gi 1596947128 187 LEWAYEEEIRL 197
Cdd:pfam11185  79 PAFSYEKEWRL 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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