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Conserved domains on  [gi|1600393187|gb|TEW34337|]
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[Fe-S]-dependent transcriptional repressor FeoC [Escherichia coli]

Protein Classification

PRK15431 family protein( domain architecture ID 10015113)

PRK15431 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15431 PRK15431
[Fe-S]-dependent transcriptional repressor FeoC;
1-78 1.52e-47

[Fe-S]-dependent transcriptional repressor FeoC;


:

Pssm-ID: 185329  Cd Length: 78  Bit Score: 145.40  E-value: 1.52e-47
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1600393187  1 MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGKAVRIQEEPDGCLSGSCKSCPEGKACLREWWALR 78
Cdd:PRK15431   1 MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGKAVRIQEEPDGCLSGSCKSCPEGKACLREWWALR 78
 
Name Accession Description Interval E-value
PRK15431 PRK15431
[Fe-S]-dependent transcriptional repressor FeoC;
1-78 1.52e-47

[Fe-S]-dependent transcriptional repressor FeoC;


Pssm-ID: 185329  Cd Length: 78  Bit Score: 145.40  E-value: 1.52e-47
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1600393187  1 MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGKAVRIQEEPDGCLSGSCKSCPEGKACLREWWALR 78
Cdd:PRK15431   1 MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGKAVRIQEEPDGCLSGSCKSCPEGKACLREWWALR 78
FeoC pfam09012
FeoC like transcriptional regulator; This family contains several transcriptional regulators, ...
 3-70 1.02e-09

FeoC like transcriptional regulator; This family contains several transcriptional regulators, including FeoC, which contain a HTH motif. FeoC acts as a [Fe-S] dependant transcriptional repressor.


Pssm-ID: 462655 [Multi-domain]  Cd Length: 69  Bit Score: 49.24  E-value: 1.02e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1600393187  3 SLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGKAVRiqEEPDGCLSGSCKSCPEGKAC 70
Cdd:pfam09012  1 ILTELKAYLQERGRASLKELSRHFKASPDAVEGMLEQWIRKGRVEK--LPAGACCGGSCKKCGGAPEV 66
 
Name Accession Description Interval E-value
PRK15431 PRK15431
[Fe-S]-dependent transcriptional repressor FeoC;
1-78 1.52e-47

[Fe-S]-dependent transcriptional repressor FeoC;


Pssm-ID: 185329  Cd Length: 78  Bit Score: 145.40  E-value: 1.52e-47
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1600393187  1 MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGKAVRIQEEPDGCLSGSCKSCPEGKACLREWWALR 78
Cdd:PRK15431   1 MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGKAVRIQEEPDGCLSGSCKSCPEGKACLREWWALR 78
FeoC pfam09012
FeoC like transcriptional regulator; This family contains several transcriptional regulators, ...
 3-70 1.02e-09

FeoC like transcriptional regulator; This family contains several transcriptional regulators, including FeoC, which contain a HTH motif. FeoC acts as a [Fe-S] dependant transcriptional repressor.


Pssm-ID: 462655 [Multi-domain]  Cd Length: 69  Bit Score: 49.24  E-value: 1.02e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1600393187  3 SLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGKAVRiqEEPDGCLSGSCKSCPEGKAC 70
Cdd:pfam09012  1 ILTELKAYLQERGRASLKELSRHFKASPDAVEGMLEQWIRKGRVEK--LPAGACCGGSCKKCGGAPEV 66
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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