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Conserved domains on  [gi|1604563737|gb|TFG41713|]
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hypothetical protein E4H43_04075, partial [Bacteroidia bacterium]

Protein Classification

Fer4_22 domain-containing protein( domain architecture ID 12182539)

Fer4_22 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Fer4_22 pfam17179
4Fe-4S dicluster domain;
89-178 1.49e-32

4Fe-4S dicluster domain;


:

Pssm-ID: 465372 [Multi-domain]  Cd Length: 95  Bit Score: 112.27  E-value: 1.49e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1604563737  89 CVSCGACATICPTCSCFLLVDKP----GFEKIKQLDACQYPGFQRVAGGEDTLHERSSRFRNRYMCKYVWKPEKFTSVAC 164
Cdd:pfam17179   2 CLSCGACTFVCPTCFCFDVQDEVengkSGERRRVWDSCMFEGFTRMAGGHNPRPTKGERYRQRFMHKLSYFPDRFGRSGC 81

                          90
                  ....*....|....
gi 1604563737 165 TGCGRCIEACIGKI 178
Cdd:pfam17179  82 VGCGRCITWCPVGI 95
 
Name Accession Description Interval E-value
Fer4_22 pfam17179
4Fe-4S dicluster domain;
89-178 1.49e-32

4Fe-4S dicluster domain;


Pssm-ID: 465372 [Multi-domain]  Cd Length: 95  Bit Score: 112.27  E-value: 1.49e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1604563737  89 CVSCGACATICPTCSCFLLVDKP----GFEKIKQLDACQYPGFQRVAGGEDTLHERSSRFRNRYMCKYVWKPEKFTSVAC 164
Cdd:pfam17179   2 CLSCGACTFVCPTCFCFDVQDEVengkSGERRRVWDSCMFEGFTRMAGGHNPRPTKGERYRQRFMHKLSYFPDRFGRSGC 81

                          90
                  ....*....|....
gi 1604563737 165 TGCGRCIEACIGKI 178
Cdd:pfam17179  82 VGCGRCITWCPVGI 95
LutB COG1139
L-lactate utilization protein LutB, contains a ferredoxin-type domain [Energy production and ...
 163-187 7.75e-03

L-lactate utilization protein LutB, contains a ferredoxin-type domain [Energy production and conversion];


Pssm-ID: 440754 [Multi-domain]  Cd Length: 465  Bit Score: 36.24  E-value: 7.75e-03
                          10        20
                  ....*....|....*....|....*
gi 1604563737 163 ACTGCGRCIEACIGKINKNELFLEL 187
Cdd:COG1139   362 ASTLCGACTEVCPVKIPIPELLLEL 386
 
Name Accession Description Interval E-value
Fer4_22 pfam17179
4Fe-4S dicluster domain;
89-178 1.49e-32

4Fe-4S dicluster domain;


Pssm-ID: 465372 [Multi-domain]  Cd Length: 95  Bit Score: 112.27  E-value: 1.49e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1604563737  89 CVSCGACATICPTCSCFLLVDKP----GFEKIKQLDACQYPGFQRVAGGEDTLHERSSRFRNRYMCKYVWKPEKFTSVAC 164
Cdd:pfam17179   2 CLSCGACTFVCPTCFCFDVQDEVengkSGERRRVWDSCMFEGFTRMAGGHNPRPTKGERYRQRFMHKLSYFPDRFGRSGC 81

                          90
                  ....*....|....
gi 1604563737 165 TGCGRCIEACIGKI 178
Cdd:pfam17179  82 VGCGRCITWCPVGI 95
LutB COG1139
L-lactate utilization protein LutB, contains a ferredoxin-type domain [Energy production and ...
 163-187 7.75e-03

L-lactate utilization protein LutB, contains a ferredoxin-type domain [Energy production and conversion];


Pssm-ID: 440754 [Multi-domain]  Cd Length: 465  Bit Score: 36.24  E-value: 7.75e-03
                          10        20
                  ....*....|....*....|....*
gi 1604563737 163 ACTGCGRCIEACIGKINKNELFLEL 187
Cdd:COG1139   362 ASTLCGACTEVCPVKIPIPELLLEL 386
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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