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BCCT family transporter [Escherichia coli]
Protein Classification
BCCT family transporter ( domain architecture ID 10013385 )
BCCT (betaine-carnitine-choline transporter) family transporter shares the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]; energized by pmf-driven proton symport; similar to Escherichia coli transporter YeaV
List of domain hits
Name
Accession
Description
Interval
E-value
PRK09950
PRK09950 putative transporter; Provisional
1-506
0e+00
putative transporter; Provisional
Pssm-ID: 236636
Cd Length: 506
Bit Score: 917.26
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 1 M MS N V KKKD V PLIS I SL V A IL FI A AALSLFPQQSA D AAN A I YTF VTRT L GS A VQ VL VLLAM G LV I YLATSKYGNIRLGEG 80
Cdd:PRK09950 1 M QN N K KKKD K PLIS T SL L A VF FI V AALSLFPQQSA A AAN T I FQW VTRT F GS P VQ LF VLLAM I LV L YLATSKYGNIRLGEG 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 81 KPEYSTLSWLFMFICAGLGSSTLYWGV A EWAYYYQTPGLNIAPRS QQ ALE F SV P YSFFHWGISAWATY T LASLIMAYHFH 160
Cdd:PRK09950 81 KPEYSTLSWLFMFICAGLGSSTLYWGV M EWAYYYQTPGLNIAPRS PK ALE Y SV S YSFFHWGISAWATY A LASLIMAYHFH 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 161 VRKNKGLSLSGIIAAITGV R PQGPWG K LVDLMFLIATVGALTISLVVTAATFTRGLSALTGLP D NFTVQAFVILLSG G IF 240
Cdd:PRK09950 161 VRKNKGLSLSGIIAAITGV K PQGPWG R LVDLMFLIATVGALTISLVVTAATFTRGLSALTGLP N NFTVQAFVILLSG V IF 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 241 CLSS W IGI N NGLQRLSKMVGWGAFL LP LLVLIVGPTEFITN S IIN A IGLTTQNFLQMSLFTDP L GDGSFTRNWTVFYWLW 320
Cdd:PRK09950 241 CLSS Y IGI D NGLQRLSKMVGWGAFL FA LLVLIVGPTEFITN N IIN S IGLTTQNFLQMSLFTDP M GDGSFTRNWTVFYWLW 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 321 WISYTPGVAMFVTRVSRGRKIKEVIWGLILGS T VGCWFFFGV M ESYAIHQFINGVINVPQ V L E TLGGETAVQQ V L M SLPA 400
Cdd:PRK09950 321 WISYTPGVAMFVTRVSRGRKIKEVIWGLILGS S VGCWFFFGV L ESYAIHQFINGVINVPQ I L N TLGGETAVQQ L L S SLPA 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 401 GKLFLAAYLG V MIIFLASHMDAVAYTMAATSTRNL Q EGDDPDRGLRLFWCVVITLIPLSILFTGASL E TMKTTVVLTALP 480
Cdd:PRK09950 401 GKLFLAAYLG I MIIFLASHMDAVAYTMAATSTRNL R EGDDPDRGLRLFWCVVITLIPLSILFTGASL D TMKTTVVLTALP 480
490 500
....*....|....*....|....*.
gi 1608028572 481 FL A ILL V KV G GFIRWLKQDYAD I PAH 506
Cdd:PRK09950 481 FL V ILL I KV Y GFIRWLKQDYAD V PAH 506
Name
Accession
Description
Interval
E-value
PRK09950
PRK09950 putative transporter; Provisional
1-506
0e+00
putative transporter; Provisional
Pssm-ID: 236636
Cd Length: 506
Bit Score: 917.26
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 1 M MS N V KKKD V PLIS I SL V A IL FI A AALSLFPQQSA D AAN A I YTF VTRT L GS A VQ VL VLLAM G LV I YLATSKYGNIRLGEG 80
Cdd:PRK09950 1 M QN N K KKKD K PLIS T SL L A VF FI V AALSLFPQQSA A AAN T I FQW VTRT F GS P VQ LF VLLAM I LV L YLATSKYGNIRLGEG 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 81 KPEYSTLSWLFMFICAGLGSSTLYWGV A EWAYYYQTPGLNIAPRS QQ ALE F SV P YSFFHWGISAWATY T LASLIMAYHFH 160
Cdd:PRK09950 81 KPEYSTLSWLFMFICAGLGSSTLYWGV M EWAYYYQTPGLNIAPRS PK ALE Y SV S YSFFHWGISAWATY A LASLIMAYHFH 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 161 VRKNKGLSLSGIIAAITGV R PQGPWG K LVDLMFLIATVGALTISLVVTAATFTRGLSALTGLP D NFTVQAFVILLSG G IF 240
Cdd:PRK09950 161 VRKNKGLSLSGIIAAITGV K PQGPWG R LVDLMFLIATVGALTISLVVTAATFTRGLSALTGLP N NFTVQAFVILLSG V IF 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 241 CLSS W IGI N NGLQRLSKMVGWGAFL LP LLVLIVGPTEFITN S IIN A IGLTTQNFLQMSLFTDP L GDGSFTRNWTVFYWLW 320
Cdd:PRK09950 241 CLSS Y IGI D NGLQRLSKMVGWGAFL FA LLVLIVGPTEFITN N IIN S IGLTTQNFLQMSLFTDP M GDGSFTRNWTVFYWLW 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 321 WISYTPGVAMFVTRVSRGRKIKEVIWGLILGS T VGCWFFFGV M ESYAIHQFINGVINVPQ V L E TLGGETAVQQ V L M SLPA 400
Cdd:PRK09950 321 WISYTPGVAMFVTRVSRGRKIKEVIWGLILGS S VGCWFFFGV L ESYAIHQFINGVINVPQ I L N TLGGETAVQQ L L S SLPA 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 401 GKLFLAAYLG V MIIFLASHMDAVAYTMAATSTRNL Q EGDDPDRGLRLFWCVVITLIPLSILFTGASL E TMKTTVVLTALP 480
Cdd:PRK09950 401 GKLFLAAYLG I MIIFLASHMDAVAYTMAATSTRNL R EGDDPDRGLRLFWCVVITLIPLSILFTGASL D TMKTTVVLTALP 480
490 500
....*....|....*....|....*.
gi 1608028572 481 FL A ILL V KV G GFIRWLKQDYAD I PAH 506
Cdd:PRK09950 481 FL V ILL I KV Y GFIRWLKQDYAD V PAH 506
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
57-499
0e+00
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 541.56
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 57 V L L AM G L V I Y L A T S K YG N IRLG -- EG KPE Y STLSWL F M FIC AG L G SSTLY WGVAE WAY YY Q TP GLNIA P R S QQ A L E FSVP 134
Cdd:TIGR00842 8 V T L FL G F V L Y I A F S R YG K IRLG rd DE KPE F STLSWL A M LFA AG M G AGLMF WGVAE PLT YY L TP PFGAG P T S TT A Q E QALA 87
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 135 Y SF FHWGI SA WA T Y T L AS L IM AY h FH V RK NKG L S LS GIIAAIT G VRPQ GP W GK LV D LMF L I ATV GALTI SL VVT A ATFTR 214
Cdd:TIGR00842 88 Y TL FHWGI HP WA I Y A L VG L AL AY - FH F RK GLP L R LS SALVPLL G EKVN GP I GK AI D ILA L V ATV FGVAT SL GLG A PQINA 166
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 215 GLSAL T G L PD N F TV QA FV IL LSGGIF C L S SWI G INN G LQR LS KMVGWG AFLL P L L VLIVGPT E F IT NS IINA IG LTT QNF 294
Cdd:TIGR00842 167 GLSAL F G I PD S F WL QA LI IL CVTALA C I S VAS G VGK G IKI LS NINMAL AFLL L L F VLIVGPT V F LL NS FVDS IG NYL QNF 246
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 295 L QMS LF TDP - L G D G SFTRN WTVFYW L WWIS YT P G V A MF VT R V SRGR K I K E V I W G LI LG S T VG -- C WF FFGVMESYAIH Q f 371
Cdd:TIGR00842 247 P QMS FR TDP d D G K G GWPGG WTVFYW A WWIS WS P F V G MF IA R I SRGR T I R E F I F G VL LG P T AF tw L WF SVFGNSALLLQ Q - 325
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 372 IN G V IN V P Q V L ET L g G ET A VQQV L MS LP A G KLFL A AY L GVM IIF LASHM D AVAYTM A A T ST R NL Q E G DD P DRGL R L FW C V 451
Cdd:TIGR00842 326 NG G F IN G P F V V ET N - G AR A LFGL L AA LP L G TITM A LA L ILI IIF FITSA D SASLVL A N T TS R GG Q L G EE P PKWV R V FW A V 404
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1608028572 452 V I T LI P L SI LF T G A SL ETMK TT VVLT ALPF LAIL LV KVGGF I RW LKQD 499
Cdd:TIGR00842 405 A I G LI A L VL LF S G G SL AALQ TT TIIA ALPF SFVM LV VMFSL I KD LKQD 452
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
6-509
1.59e-164
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 476.56
E-value: 1.59e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 6 KK K D V P LISI S LVA IL FIAAALS LFP QQSADAA NA IYTFV T RTL G SAVQV LVLL AMGLVI YLA T SKYG N IRLG -- EG KPE 83
Cdd:COG1292 11 KK I D P P VFIP S ALL IL AFVLWGL LFP EAAGAVL NA AFSWI T TNF G WFYLL LVLL FVVFCL YLA F SKYG K IRLG gd DA KPE 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 84 Y ST L SW LF M FIC AG L G SSTLY WGVAE WA Y YYQT P GLNIA P R S QQ A LEFSVP Y S FFHWG IS AWA T Y T L AS L IM AY HFH v R K 163
Cdd:COG1292 91 F ST F SW FA M LFS AG M G IGLVF WGVAE PL Y HFLS P PPGVE P G S PE A ARWAMA Y T FFHWG LH AWA I Y A L VG L AL AY FAY - R R 169
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 164 NKG L SL S GIIAAIT G V R PQ GP W GK LV D LMFLI ATV GALTI SL VVT A ATFTR GL SA L T G L P DNF TVQ AFV I LLSGGI F CL S 243
Cdd:COG1292 170 GLP L TI S SALYPLL G D R IY GP I GK VI D ILAVF ATV FGVAT SL GLG A LQINA GL NY L F G I P NSL TVQ III I AVITAL F TI S 249
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 244 SWI G INN G LQ RLS KMVGWG A F LL P L L VLIVGPT E FI T N SIINAI G LTT QNF LQ MSL F TD PL GD GSFTRN WTVFYW L WWI S 323
Cdd:COG1292 250 AVS G LDK G IK RLS NLNMVL A L LL L L F VLIVGPT L FI L N LFVQSL G DYL QNF VP MSL W TD AY GD TGWLGG WTVFYW A WWI A 329
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 324 YT P G V AM F VT R V SRGR K I K E VIW G LI L GS T VGCWFF F G V MESY AIH QFI NG VINVPQVLET l G G E T A VQQV L MS LP A G KL 403
Cdd:COG1292 330 WA P F V GL F IA R I SRGR T I R E FVL G VL L VP T LFTFLW F S V FGGT AIH LEL NG GGDLAEAVAA - G V E A A LFAL L EQ LP L G TI 408
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 404 FLAAYLGVM IIF LASHM D AVAYTM A ATSTR nlq EGDD P D R GL R L FW C V V I T L IPLSI L FT G a S L ETMK T TVVL TALPF LA 483
Cdd:COG1292 409 LSVLAIILV IIF FVTSA D SGSLVL A MLTSG --- GDEE P P R WQ R I FW G V L I G L VAAVL L LA G - G L SALQ T ASII TALPF SF 484
490 500
....*....|....*....|....*.
gi 1608028572 484 I LL VKVGGFIRW L KQ D YADIPAHQV E 509
Cdd:COG1292 485 V LL LMCVSLVKA L RE D PRRLRSAEA E 510
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
15-499
1.12e-130
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 389.20
E-value: 1.12e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 15 I S LVA IL FIAAALSL FP QQSADAA N AIYTFV T RTL G SAVQV LVL LAMGLVIY LA T S K YGNIRLG -- EG KPE Y ST L SW LF M 92
Cdd:pfam02028 4 V S AGL IL AFVLLGLI FP EALSAVV N TALDWI T DNF G WFYLL LVL IFLVFALF LA F S R YGNIRLG gd DD KPE F ST F SW FA M 83
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 93 FIC AG L G SSTLY WGVAE WAYY Y QT P GLNIA P RSQQ A LEFSVP Y S FFHWG IS AWA T Y T L AS L IM AY h F HV RK NKG L SL S GI 172
Cdd:pfam02028 84 LFA AG M G IGLVF WGVAE PLSH Y LS P PPGGE P GTPE A AQQAMA Y T FFHWG LH AWA I Y A L VA L AL AY - F AY RK GLP L LI S SA 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 173 IAAIT G V R PQ GP W GK LV D LMFL IATV GALTI SL VVT A ATFTR GLS A L T G L P DNF T V Q AFV I LLSGGI F CL S SWI G INN G L 252
Cdd:pfam02028 163 LYPLL G D R ID GP I GK AI D ILAI IATV FGVAT SL GLG A LQINA GLS Y L F G I P NTL T T Q LAI I AIITAL F TI S AVS G LDK G I 242
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 253 Q RLS KMVGWG A FL L P L L VLI V GPT E FI T N SIINAI G LTT QNF LQ MS LF TDP L GD - G SFTRN WT V FYW L WWI SYT P G V A MF 331
Cdd:pfam02028 243 K RLS NLNMYL A VA L L L F VLI A GPT L FI L N TFVQSL G DYL QNF VP MS FY TDP F GD t G GWLGG WT I FYW A WWI AWA P F V G MF 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 332 VT R V SRGR K I K E V I W G LI L GS T VGCWFF F G V MESY AI HQFI NG VINVPQVL E T l G GET A VQQV L MS LP A G KLFLAAY L GV 411
Cdd:pfam02028 323 IA R I SRGR T I R E F I L G VL L VP T LFTFLW F S V FGGT AI YLEL NG PGDLADAV E A - G PPA A LFAL L EQ LP L G TILSVLA L LL 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 412 M IIF LASHM D AVAYTM A AT S TR nlq EGDD P D R GL R L FW C V VITLIPLSI L FT G a S LE TMKTTVVLT ALPF LA ILL VKVGG 491
Cdd:pfam02028 402 I IIF FVTSA D SGTLVI A ML S SG --- GDLN P P R WQ R V FW G V LLGAVAAVL L LA G - G LE ALQSASIIA ALPF SF ILL LMCIS 477
....*...
gi 1608028572 492 FIRW L KQD 499
Cdd:pfam02028 478 LFKA L REE 485
Name
Accession
Description
Interval
E-value
PRK09950
PRK09950 putative transporter; Provisional
1-506
0e+00
putative transporter; Provisional
Pssm-ID: 236636
Cd Length: 506
Bit Score: 917.26
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 1 M MS N V KKKD V PLIS I SL V A IL FI A AALSLFPQQSA D AAN A I YTF VTRT L GS A VQ VL VLLAM G LV I YLATSKYGNIRLGEG 80
Cdd:PRK09950 1 M QN N K KKKD K PLIS T SL L A VF FI V AALSLFPQQSA A AAN T I FQW VTRT F GS P VQ LF VLLAM I LV L YLATSKYGNIRLGEG 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 81 KPEYSTLSWLFMFICAGLGSSTLYWGV A EWAYYYQTPGLNIAPRS QQ ALE F SV P YSFFHWGISAWATY T LASLIMAYHFH 160
Cdd:PRK09950 81 KPEYSTLSWLFMFICAGLGSSTLYWGV M EWAYYYQTPGLNIAPRS PK ALE Y SV S YSFFHWGISAWATY A LASLIMAYHFH 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 161 VRKNKGLSLSGIIAAITGV R PQGPWG K LVDLMFLIATVGALTISLVVTAATFTRGLSALTGLP D NFTVQAFVILLSG G IF 240
Cdd:PRK09950 161 VRKNKGLSLSGIIAAITGV K PQGPWG R LVDLMFLIATVGALTISLVVTAATFTRGLSALTGLP N NFTVQAFVILLSG V IF 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 241 CLSS W IGI N NGLQRLSKMVGWGAFL LP LLVLIVGPTEFITN S IIN A IGLTTQNFLQMSLFTDP L GDGSFTRNWTVFYWLW 320
Cdd:PRK09950 241 CLSS Y IGI D NGLQRLSKMVGWGAFL FA LLVLIVGPTEFITN N IIN S IGLTTQNFLQMSLFTDP M GDGSFTRNWTVFYWLW 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 321 WISYTPGVAMFVTRVSRGRKIKEVIWGLILGS T VGCWFFFGV M ESYAIHQFINGVINVPQ V L E TLGGETAVQQ V L M SLPA 400
Cdd:PRK09950 321 WISYTPGVAMFVTRVSRGRKIKEVIWGLILGS S VGCWFFFGV L ESYAIHQFINGVINVPQ I L N TLGGETAVQQ L L S SLPA 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 401 GKLFLAAYLG V MIIFLASHMDAVAYTMAATSTRNL Q EGDDPDRGLRLFWCVVITLIPLSILFTGASL E TMKTTVVLTALP 480
Cdd:PRK09950 401 GKLFLAAYLG I MIIFLASHMDAVAYTMAATSTRNL R EGDDPDRGLRLFWCVVITLIPLSILFTGASL D TMKTTVVLTALP 480
490 500
....*....|....*....|....*.
gi 1608028572 481 FL A ILL V KV G GFIRWLKQDYAD I PAH 506
Cdd:PRK09950 481 FL V ILL I KV Y GFIRWLKQDYAD V PAH 506
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
57-499
0e+00
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 541.56
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 57 V L L AM G L V I Y L A T S K YG N IRLG -- EG KPE Y STLSWL F M FIC AG L G SSTLY WGVAE WAY YY Q TP GLNIA P R S QQ A L E FSVP 134
Cdd:TIGR00842 8 V T L FL G F V L Y I A F S R YG K IRLG rd DE KPE F STLSWL A M LFA AG M G AGLMF WGVAE PLT YY L TP PFGAG P T S TT A Q E QALA 87
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 135 Y SF FHWGI SA WA T Y T L AS L IM AY h FH V RK NKG L S LS GIIAAIT G VRPQ GP W GK LV D LMF L I ATV GALTI SL VVT A ATFTR 214
Cdd:TIGR00842 88 Y TL FHWGI HP WA I Y A L VG L AL AY - FH F RK GLP L R LS SALVPLL G EKVN GP I GK AI D ILA L V ATV FGVAT SL GLG A PQINA 166
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 215 GLSAL T G L PD N F TV QA FV IL LSGGIF C L S SWI G INN G LQR LS KMVGWG AFLL P L L VLIVGPT E F IT NS IINA IG LTT QNF 294
Cdd:TIGR00842 167 GLSAL F G I PD S F WL QA LI IL CVTALA C I S VAS G VGK G IKI LS NINMAL AFLL L L F VLIVGPT V F LL NS FVDS IG NYL QNF 246
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 295 L QMS LF TDP - L G D G SFTRN WTVFYW L WWIS YT P G V A MF VT R V SRGR K I K E V I W G LI LG S T VG -- C WF FFGVMESYAIH Q f 371
Cdd:TIGR00842 247 P QMS FR TDP d D G K G GWPGG WTVFYW A WWIS WS P F V G MF IA R I SRGR T I R E F I F G VL LG P T AF tw L WF SVFGNSALLLQ Q - 325
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 372 IN G V IN V P Q V L ET L g G ET A VQQV L MS LP A G KLFL A AY L GVM IIF LASHM D AVAYTM A A T ST R NL Q E G DD P DRGL R L FW C V 451
Cdd:TIGR00842 326 NG G F IN G P F V V ET N - G AR A LFGL L AA LP L G TITM A LA L ILI IIF FITSA D SASLVL A N T TS R GG Q L G EE P PKWV R V FW A V 404
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1608028572 452 V I T LI P L SI LF T G A SL ETMK TT VVLT ALPF LAIL LV KVGGF I RW LKQD 499
Cdd:TIGR00842 405 A I G LI A L VL LF S G G SL AALQ TT TIIA ALPF SFVM LV VMFSL I KD LKQD 452
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
6-509
1.59e-164
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 476.56
E-value: 1.59e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 6 KK K D V P LISI S LVA IL FIAAALS LFP QQSADAA NA IYTFV T RTL G SAVQV LVLL AMGLVI YLA T SKYG N IRLG -- EG KPE 83
Cdd:COG1292 11 KK I D P P VFIP S ALL IL AFVLWGL LFP EAAGAVL NA AFSWI T TNF G WFYLL LVLL FVVFCL YLA F SKYG K IRLG gd DA KPE 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 84 Y ST L SW LF M FIC AG L G SSTLY WGVAE WA Y YYQT P GLNIA P R S QQ A LEFSVP Y S FFHWG IS AWA T Y T L AS L IM AY HFH v R K 163
Cdd:COG1292 91 F ST F SW FA M LFS AG M G IGLVF WGVAE PL Y HFLS P PPGVE P G S PE A ARWAMA Y T FFHWG LH AWA I Y A L VG L AL AY FAY - R R 169
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 164 NKG L SL S GIIAAIT G V R PQ GP W GK LV D LMFLI ATV GALTI SL VVT A ATFTR GL SA L T G L P DNF TVQ AFV I LLSGGI F CL S 243
Cdd:COG1292 170 GLP L TI S SALYPLL G D R IY GP I GK VI D ILAVF ATV FGVAT SL GLG A LQINA GL NY L F G I P NSL TVQ III I AVITAL F TI S 249
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 244 SWI G INN G LQ RLS KMVGWG A F LL P L L VLIVGPT E FI T N SIINAI G LTT QNF LQ MSL F TD PL GD GSFTRN WTVFYW L WWI S 323
Cdd:COG1292 250 AVS G LDK G IK RLS NLNMVL A L LL L L F VLIVGPT L FI L N LFVQSL G DYL QNF VP MSL W TD AY GD TGWLGG WTVFYW A WWI A 329
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 324 YT P G V AM F VT R V SRGR K I K E VIW G LI L GS T VGCWFF F G V MESY AIH QFI NG VINVPQVLET l G G E T A VQQV L MS LP A G KL 403
Cdd:COG1292 330 WA P F V GL F IA R I SRGR T I R E FVL G VL L VP T LFTFLW F S V FGGT AIH LEL NG GGDLAEAVAA - G V E A A LFAL L EQ LP L G TI 408
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 404 FLAAYLGVM IIF LASHM D AVAYTM A ATSTR nlq EGDD P D R GL R L FW C V V I T L IPLSI L FT G a S L ETMK T TVVL TALPF LA 483
Cdd:COG1292 409 LSVLAIILV IIF FVTSA D SGSLVL A MLTSG --- GDEE P P R WQ R I FW G V L I G L VAAVL L LA G - G L SALQ T ASII TALPF SF 484
490 500
....*....|....*....|....*.
gi 1608028572 484 I LL VKVGGFIRW L KQ D YADIPAHQV E 509
Cdd:COG1292 485 V LL LMCVSLVKA L RE D PRRLRSAEA E 510
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
15-499
1.12e-130
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 389.20
E-value: 1.12e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 15 I S LVA IL FIAAALSL FP QQSADAA N AIYTFV T RTL G SAVQV LVL LAMGLVIY LA T S K YGNIRLG -- EG KPE Y ST L SW LF M 92
Cdd:pfam02028 4 V S AGL IL AFVLLGLI FP EALSAVV N TALDWI T DNF G WFYLL LVL IFLVFALF LA F S R YGNIRLG gd DD KPE F ST F SW FA M 83
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 93 FIC AG L G SSTLY WGVAE WAYY Y QT P GLNIA P RSQQ A LEFSVP Y S FFHWG IS AWA T Y T L AS L IM AY h F HV RK NKG L SL S GI 172
Cdd:pfam02028 84 LFA AG M G IGLVF WGVAE PLSH Y LS P PPGGE P GTPE A AQQAMA Y T FFHWG LH AWA I Y A L VA L AL AY - F AY RK GLP L LI S SA 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 173 IAAIT G V R PQ GP W GK LV D LMFL IATV GALTI SL VVT A ATFTR GLS A L T G L P DNF T V Q AFV I LLSGGI F CL S SWI G INN G L 252
Cdd:pfam02028 163 LYPLL G D R ID GP I GK AI D ILAI IATV FGVAT SL GLG A LQINA GLS Y L F G I P NTL T T Q LAI I AIITAL F TI S AVS G LDK G I 242
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 253 Q RLS KMVGWG A FL L P L L VLI V GPT E FI T N SIINAI G LTT QNF LQ MS LF TDP L GD - G SFTRN WT V FYW L WWI SYT P G V A MF 331
Cdd:pfam02028 243 K RLS NLNMYL A VA L L L F VLI A GPT L FI L N TFVQSL G DYL QNF VP MS FY TDP F GD t G GWLGG WT I FYW A WWI AWA P F V G MF 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 332 VT R V SRGR K I K E V I W G LI L GS T VGCWFF F G V MESY AI HQFI NG VINVPQVL E T l G GET A VQQV L MS LP A G KLFLAAY L GV 411
Cdd:pfam02028 323 IA R I SRGR T I R E F I L G VL L VP T LFTFLW F S V FGGT AI YLEL NG PGDLADAV E A - G PPA A LFAL L EQ LP L G TILSVLA L LL 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 412 M IIF LASHM D AVAYTM A AT S TR nlq EGDD P D R GL R L FW C V VITLIPLSI L FT G a S LE TMKTTVVLT ALPF LA ILL VKVGG 491
Cdd:pfam02028 402 I IIF FVTSA D SGTLVI A ML S SG --- GDLN P P R WQ R V FW G V LLGAVAAVL L LA G - G LE ALQSASIIA ALPF SF ILL LMCIS 477
....*...
gi 1608028572 492 FIRW L KQD 499
Cdd:pfam02028 478 LFKA L REE 485
PRK03356
PRK03356 L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
11-502
5.67e-92
L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
Pssm-ID: 179568
Cd Length: 504
Bit Score: 290.48
E-value: 5.67e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 11 PLI SISLVAI L FIA aalsl FPQQSADAA NA IYTF VT RTL G S A VQVLVLLAMGLVIY L ATSK Y GNI RLG EG KPE Y ST L SW L 90
Cdd:PRK03356 18 PLI IVGILCW L TVR ----- DLDAANVVI NA VFSY VT NVW G W A FEWYMVVMLFGWFW L VFGP Y AKK RLG DE KPE F ST A SW I 92
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 91 FM FICAGLGSST L Y WG VA E WA YY YQ TP GLNIA P R S QQ A L E FSVP YS F FHWG ISA WATY TLA S LIMA Y H F H VRK NKGLSL S 170
Cdd:PRK03356 93 FM MFASCTSAAV L F WG SI E IY YY IS TP PFGLE P N S TG A K E LGLA YS L FHWG PLP WATY SFL S VAFG Y F F F VRK MDVIRP S 172
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 171 GIIAAIT G VRP - Q G PW G KL VD LMF L I A TVG A LTI SL VVTAATF T RGLSA L T G L P DNFTVQ A FV I LLSGGIFCLSSWI G IN 249
Cdd:PRK03356 173 STLVPLV G EKH a K G LF G TI VD NFY L V A LIF A MGT SL GLATPLV T ECMQW L F G I P HTLQLD A II I TCWIILNAICVAC G LQ 252
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 250 N G LQRL S KMVGWGA FL LPLL V L IVG P T E FI T N SIINAI G LTTQNFLQ M SLF TDP L G D G S F TRN WTVFYW L WW IS Y TPGVA 329
Cdd:PRK03356 253 K G VRIA S DVRSYLS FL MLGW V F IVG G T S FI M N YFTDSV G MLLMYLPR M LFY TDP I G K G G F PQG WTVFYW A WW VI Y AIQMS 332
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 330 M F VT R V SRGR KIK E VIW G LI LG S T VGC W FFFG V ME S YAIHQFINGV IN V P QVL E TL G GET A VQQVLMS LP AGKLFLAAYL 409
Cdd:PRK03356 333 I F LA R I SRGR TVR E LCF G MV LG L T AST W ILWT V LG S NTLLLMDKNI IN I P NLI E QY G VAR A IIETWAA LP LSTATMWGFF 412
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 410 GVMI I FLASHMD A VA YT M A ATST R NLQE G DD P DRGL R LF W CVVITL I PLSI L FT G A s L ETMK T TVVLTAL P FLAILLVKV 489
Cdd:PRK03356 413 ILCF I ATVTLIN A CS YT L A MSTC R EVRD G EE P PLLV R IG W SILVGI I GIVL L AL G G - L KPIQ T AIIAGGC P LFFVNIMVT 491
490
....*....|...
gi 1608028572 490 GG FI RWL KQ DYA D 502
Cdd:PRK03356 492 LS FI KDA KQ NWK D 504
PRK09928
PRK09928 choline transport protein BetT; Provisional
15-500
6.83e-64
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 220.72
E-value: 6.83e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 15 I S LVA IL FIAAALS LF PQQ S ADAA N AIYTF V TR T L G SAVQVLVL L AMGL VI YL A T S KY G N I R LG -- EG KPE Y S T LSW LF M 92
Cdd:PRK09928 22 T S AGL IL LFSLTTI LF TDF S NRWI N RTLNW V SK T F G WYYLLAAT L YIVF VI FI A C S RF G S I K LG pe QS KPE F S L LSW AA M 101
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 93 FIC AG L G SSTLYWG VAE WAYY Y QT P glnia P RSQ ---- Q A LEFSVPYSF FH W G ISA W AT Y T L ASLIMA Y h F HV R K N KG L S 168
Cdd:PRK09928 102 LFA AG I G IDLMFFS VAE PVTQ Y MQ P ----- P EGA gqti E A ARQAMVWTL FH Y G LTG W SM Y A L MGMALG Y - F SY R Y N LP L T 175
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 169 LSGIIAA I T G V R PQ GP W G KL VD LMFL I A T VGALTIS L VVTAATFTR GLS A L TGL P DNFTV QA FV I L LS GG I FCL S SWI G I 248
Cdd:PRK09928 176 IRSALYP I F G K R IN GP I G HS VD IAAV I G T IFGIATT L GIGVVQLNY GLS V L FDI P ESLAA QA AL I A LS VI I ATI S VTS G V 255
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 249 N N G LQR LS KMVGWG A FL L P L L VL IV G P T E F IT N SIINAI G LTTQN F LQ M S L ---- F TD P LG dgs FTR NWT V F Y W L WW ISY 324
Cdd:PRK09928 256 N K G IRV LS ELNVLL A LG L I L F VL FM G D T S F LL N ALVLNV G DYVNR F MG M T L nsfa F DR P TE --- WMN NWT L F F W A WW VAW 332
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 325 T P G V AM F VT R V SRGR K I KEVIW G LILGSTVGCWFFFGVMESY A IHQF I N G VINVPQ - VLET lg G E TAVQQV L MSL PA GKL 403
Cdd:PRK09928 333 S P F V GL F LA R I SRGR T I RQFVL G TLIIPFTFTLLWLSIFGNS A LYEI I H G NAAFAE e AMAH -- P E RGFYSL L AQY PA FTF 410
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1608028572 404 FLAAYLGVMII F LASHM D AV A YTMAATSTRNLQEGD D PDRG LR L FW C V V I T L IP L SI L F T GA s LETMKT T V V LTA LPF LA 483
Cdd:PRK09928 411 SASVATITGLL F YVTSA D SG A LVLGNFTSKLKDINS D APNW LR V FW S V A I G L LT L GM L M T NG - ISALQN T T V IMG LPF SF 489
490
....*....|....*...
gi 1608028572 484 ILLVKVG G FIRW LK - Q DY 500
Cdd:PRK09928 490 VIFFVMA G LYKS LK v E DY 507
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
