NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1630707190|gb|TJQ51088|]
View 

two-component system QseEF-associated lipoprotein QseG [Escherichia coli]

Protein Classification

two-component system QseEF-associated lipoprotein QseG( domain architecture ID 10013618)

two-component system QseEF-associated lipoprotein QseG is necessary for translocation of effector molecules into host epithelial cells, but is not involved in structural assembly of the type III secretion system (TTSS)

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PRK10722 PRK10722
two-component system QseEF-associated lipoprotein QseG;
1-237 1.01e-126

two-component system QseEF-associated lipoprotein QseG;


:

Pssm-ID: 236745  Cd Length: 247  Bit Score: 358.54  E-value: 1.01e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1630707190   1 MRHIFQRLLPRRLWLAGLPCLALLGCVQSHNKPAIDTPAEEKIPVYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDC 80
Cdd:PRK10722    5 LRHIFQRLLLRRLWLSGLPCLLLAGCVQNANKPAASTAAEEKIPEYQLADYRSTECDDIWALQGKAAENNPLYWLRAMDC 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1630707190  81 ADRLMPAQSRQQARQYDDGSWQNTFKQGILLADAKITPYERRQLVARIDALSTEIPAQVRPLYQLWRDGQALQLQLAEER 160
Cdd:PRK10722   85 ADRLMPAQARAQAKRLPDDSWQNAFKQGILLADAKITPAERRQIVERLNAYSLQIPAQVRPLYQLWRDGQALQLALAEER 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1630707190 161 QRYGKLQQASDSELDTLRQQHHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDTP------HEGEKPAPSTHEVTP 234
Cdd:PRK10722  165 QRYQKLQQSSDSELDALRQQQQRLQYQLELTTRKLENLTDIERQLSSRKQAGNFSPDTPekpatsEESEAPAPSTDEVTP 244


                  ...
gi 1630707190 235 DEP 237
Cdd:PRK10722  245 DEP 247
 
Name Accession Description Interval E-value
PRK10722 PRK10722
two-component system QseEF-associated lipoprotein QseG;
1-237 1.01e-126

two-component system QseEF-associated lipoprotein QseG;


Pssm-ID: 236745  Cd Length: 247  Bit Score: 358.54  E-value: 1.01e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1630707190   1 MRHIFQRLLPRRLWLAGLPCLALLGCVQSHNKPAIDTPAEEKIPVYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDC 80
Cdd:PRK10722    5 LRHIFQRLLLRRLWLSGLPCLLLAGCVQNANKPAASTAAEEKIPEYQLADYRSTECDDIWALQGKAAENNPLYWLRAMDC 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1630707190  81 ADRLMPAQSRQQARQYDDGSWQNTFKQGILLADAKITPYERRQLVARIDALSTEIPAQVRPLYQLWRDGQALQLQLAEER 160
Cdd:PRK10722   85 ADRLMPAQARAQAKRLPDDSWQNAFKQGILLADAKITPAERRQIVERLNAYSLQIPAQVRPLYQLWRDGQALQLALAEER 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1630707190 161 QRYGKLQQASDSELDTLRQQHHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDTP------HEGEKPAPSTHEVTP 234
Cdd:PRK10722  165 QRYQKLQQSSDSELDALRQQQQRLQYQLELTTRKLENLTDIERQLSSRKQAGNFSPDTPekpatsEESEAPAPSTDEVTP 244


                  ...
gi 1630707190 235 DEP 237
Cdd:PRK10722  245 DEP 247
Lipoprotein_20 pfam13942
YfhG lipoprotein; This family includes the YfhG protein from E. coli. Members of this family ...
 44-218 7.85e-93

YfhG lipoprotein; This family includes the YfhG protein from E. coli. Members of this family have an N-terminal lipoprotein attachment site. The members of this family are functionally uncharacterized.


Pssm-ID: 433595  Cd Length: 175  Bit Score: 270.02  E-value: 7.85e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1630707190  44 PVYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGSWQNTFKQGILLADAKITPYERRQ 123
Cdd:pfam13942   1 PEEQVADYRIADCEDIWQLDDPAAMENALYWLRAMDCADRLSPAQARAMAKRLTDDSWQSAFKQGILLADAGITPQERRK 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1630707190 124 LVARIDALSTEIPAQVRPLYQLWRDGQALQLQLAEERQRYGKLQQASDSELDTLRQQHHVLQQQLELTTRKLENLTDIER 203
Cdd:pfam13942  81 IVERLNAYSLQFPVALRPLYQLWRDQQNLQLALAEERARYQRLQQDSDSKLDRLREQQQRLQYQLELTTRKLENLTDIER 160

                         170
                  ....*....|....*
gi 1630707190 204 QLSTRKPAGNFSPDT 218
Cdd:pfam13942 161 QLSSRKQLQGDLPDN 175
 
Name Accession Description Interval E-value
PRK10722 PRK10722
two-component system QseEF-associated lipoprotein QseG;
1-237 1.01e-126

two-component system QseEF-associated lipoprotein QseG;


Pssm-ID: 236745  Cd Length: 247  Bit Score: 358.54  E-value: 1.01e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1630707190   1 MRHIFQRLLPRRLWLAGLPCLALLGCVQSHNKPAIDTPAEEKIPVYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDC 80
Cdd:PRK10722    5 LRHIFQRLLLRRLWLSGLPCLLLAGCVQNANKPAASTAAEEKIPEYQLADYRSTECDDIWALQGKAAENNPLYWLRAMDC 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1630707190  81 ADRLMPAQSRQQARQYDDGSWQNTFKQGILLADAKITPYERRQLVARIDALSTEIPAQVRPLYQLWRDGQALQLQLAEER 160
Cdd:PRK10722   85 ADRLMPAQARAQAKRLPDDSWQNAFKQGILLADAKITPAERRQIVERLNAYSLQIPAQVRPLYQLWRDGQALQLALAEER 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1630707190 161 QRYGKLQQASDSELDTLRQQHHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDTP------HEGEKPAPSTHEVTP 234
Cdd:PRK10722  165 QRYQKLQQSSDSELDALRQQQQRLQYQLELTTRKLENLTDIERQLSSRKQAGNFSPDTPekpatsEESEAPAPSTDEVTP 244


                  ...
gi 1630707190 235 DEP 237
Cdd:PRK10722  245 DEP 247
Lipoprotein_20 pfam13942
YfhG lipoprotein; This family includes the YfhG protein from E. coli. Members of this family ...
 44-218 7.85e-93

YfhG lipoprotein; This family includes the YfhG protein from E. coli. Members of this family have an N-terminal lipoprotein attachment site. The members of this family are functionally uncharacterized.


Pssm-ID: 433595  Cd Length: 175  Bit Score: 270.02  E-value: 7.85e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1630707190  44 PVYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGSWQNTFKQGILLADAKITPYERRQ 123
Cdd:pfam13942   1 PEEQVADYRIADCEDIWQLDDPAAMENALYWLRAMDCADRLSPAQARAMAKRLTDDSWQSAFKQGILLADAGITPQERRK 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1630707190 124 LVARIDALSTEIPAQVRPLYQLWRDGQALQLQLAEERQRYGKLQQASDSELDTLRQQHHVLQQQLELTTRKLENLTDIER 203
Cdd:pfam13942  81 IVERLNAYSLQFPVALRPLYQLWRDQQNLQLALAEERARYQRLQQDSDSKLDRLREQQQRLQYQLELTTRKLENLTDIER 160

                         170
                  ....*....|....*
gi 1630707190 204 QLSTRKPAGNFSPDT 218
Cdd:pfam13942 161 QLSSRKQLQGDLPDN 175
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH