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Conserved domains on  [gi|1673105360|gb|TMP84070|]
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STAS domain-containing protein [Pseudoalteromonas sp. S983]

Protein Classification

STAS domain-containing protein( domain architecture ID 10604251)

STAS (Sulphate Transporter and AntiSigma factor antagonist) domain-containing protein similar to anti-sigma factor antagonist, which is involved in the regulation of sigma factors and their corresponding anti-sigma factors

CATH:  3.30.750.24
Gene Ontology:  GO:0043856|GO:0006355
PubMed:  22116355|10662676
SCOP:  4003567

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
STAS_2 pfam13466
STAS domain; The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is ...
 2-81 2.85e-12

STAS domain; The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.


:

Pssm-ID: 433231 [Multi-domain]  Cd Length: 80  Bit Score: 56.46  E-value: 2.85e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1673105360  2 LKLPSELAIMQVETLHQDLLQELNSNNDICLDVSEVVSADTASIQLLCALQKHLLTIHHKIVWVGSSDALQNAINQLGLS 81
Cdd:pfam13466  1 LSLSGELDADTAPALREALLAALAAGSPVVVDLSGVERVDSAGLALLLALARRARARGKRLVLRGLPPALLRLLRLLGLD 80
 
Name Accession Description Interval E-value
STAS_2 pfam13466
STAS domain; The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is ...
 2-81 2.85e-12

STAS domain; The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.


Pssm-ID: 433231 [Multi-domain]  Cd Length: 80  Bit Score: 56.46  E-value: 2.85e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1673105360  2 LKLPSELAIMQVETLHQDLLQELNSNNDICLDVSEVVSADTASIQLLCALQKHLLTIHHKIVWVGSSDALQNAINQLGLS 81
Cdd:pfam13466  1 LSLSGELDADTAPALREALLAALAAGSPVVVDLSGVERVDSAGLALLLALARRARARGKRLVLRGLPPALLRLLRLLGLD 80
MlaB COG3113
Binding protein subunit MlaB of the ABC-type intermembrane phospholipid transporter Mla, ...
 2-84 4.05e-11

Binding protein subunit MlaB of the ABC-type intermembrane phospholipid transporter Mla, contains STAS domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442347 [Multi-domain]  Cd Length: 97  Bit Score: 54.10  E-value: 4.05e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1673105360  2 LKLPSELAIMQVETLHQDLLQELNSNNDICLDVSEVVSADTASIQLLCALQKHLLTIHHKIVWVGSSDALQNAINQLGLS 81
Cdd:COG3113   14 LRLSGELTRDTVLALWAQLLALLAAGGAVEIDLSGVTRVDSAGLALLLELLREARAQGKTLRLTGVPEQLRTLAALYGLD 93


                 ...
gi 1673105360 82 QYL 84
Cdd:COG3113   94 ELL 96
 
Name Accession Description Interval E-value
STAS_2 pfam13466
STAS domain; The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is ...
 2-81 2.85e-12

STAS domain; The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.


Pssm-ID: 433231 [Multi-domain]  Cd Length: 80  Bit Score: 56.46  E-value: 2.85e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1673105360  2 LKLPSELAIMQVETLHQDLLQELNSNNDICLDVSEVVSADTASIQLLCALQKHLLTIHHKIVWVGSSDALQNAINQLGLS 81
Cdd:pfam13466  1 LSLSGELDADTAPALREALLAALAAGSPVVVDLSGVERVDSAGLALLLALARRARARGKRLVLRGLPPALLRLLRLLGLD 80
MlaB COG3113
Binding protein subunit MlaB of the ABC-type intermembrane phospholipid transporter Mla, ...
 2-84 4.05e-11

Binding protein subunit MlaB of the ABC-type intermembrane phospholipid transporter Mla, contains STAS domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442347 [Multi-domain]  Cd Length: 97  Bit Score: 54.10  E-value: 4.05e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1673105360  2 LKLPSELAIMQVETLHQDLLQELNSNNDICLDVSEVVSADTASIQLLCALQKHLLTIHHKIVWVGSSDALQNAINQLGLS 81
Cdd:COG3113   14 LRLSGELTRDTVLALWAQLLALLAAGGAVEIDLSGVTRVDSAGLALLLELLREARAQGKTLRLTGVPEQLRTLAALYGLD 93


                 ...
gi 1673105360 82 QYL 84
Cdd:COG3113   94 ELL 96
SpoIIAA COG1366
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction ...
 2-80 4.28e-04

Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms];


Pssm-ID: 440977 [Multi-domain]  Cd Length: 93  Bit Score: 35.60  E-value: 4.28e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1673105360  2 LKLPSELAIMQVETLHQDLLQELNSN-NDICLDVSEVVSADTASIQLLCALQKHLLTIHHKIVWVGSSDALQNAINQLGL 80
Cdd:COG1366   13 LPLIGELDAARAPELREALLEALETGaRRVVLDLSGVTFIDSSGLGALLSLAKAARLLGGRLVLVGVSPAVARVLELTGL 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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