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Conserved domains on  [gi|1711019391|gb|TVR72437|]
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MAG: SGNH/GDSL hydrolase family protein [Marinilabiliales bacterium]

Protein Classification

SGNH/GDSL hydrolase family protein( domain architecture ID 10110748)

SGNH/GDSL hydrolase family protein is a hydrolytic enzyme such as an esterase or lipase; may have multifunctional properties including broad substrate specificity and regiospecificity

CATH:  3.40.50.1110
EC:  3.1.-.-
Gene Ontology:  GO:0016788
PubMed:  15522763|35871440
SCOP:  3001315

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
XynE_like cd01830
SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen ...
230-432 5.15e-110

SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


:

Pssm-ID: 238868  Cd Length: 204  Bit Score: 322.27  E-value: 5.15e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 230 SLVIIGNSITDGRGSGTNRQNRWPDILAERLIKNPPTSNTGVLNQGIGGNCVLRECLGPPAIERFDRDVLGQHGVRWLII 309
Cdd:cd01830     1 SVVALGDSITDGRGSTPDANNRWPDLLAARLAARAGTRGIAVLNAGIGGNRLLADGLGPSALARFDRDVLSQPGVRTVII 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 310 LHGVNDIGQTGTKEEADQV-AEELIAAYERMIADAHAAGILVYGATILPFGNSFYYTEPGEAARQKVNEWIRSGGWFDAV 388
Cdd:cd01830    81 LEGVNDIGASGTDFAAAPVtAEELIAGYRQLIRRAHARGIKVIGATITPFEGSGYYTPAREATRQAVNEWIRTSGAFDAV 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1711019391 389 IDFDRLMRDPDDPRLLLKEFHTGDFLHPNEAGYRMMGDAVDLKL 432
Cdd:cd01830   161 VDFDAALRDPADPSRLRPAYDSGDHLHPNDAGYQAMADAVDLDL 204
 
Name Accession Description Interval E-value
XynE_like cd01830
SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen ...
230-432 5.15e-110

SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


Pssm-ID: 238868  Cd Length: 204  Bit Score: 322.27  E-value: 5.15e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 230 SLVIIGNSITDGRGSGTNRQNRWPDILAERLIKNPPTSNTGVLNQGIGGNCVLRECLGPPAIERFDRDVLGQHGVRWLII 309
Cdd:cd01830     1 SVVALGDSITDGRGSTPDANNRWPDLLAARLAARAGTRGIAVLNAGIGGNRLLADGLGPSALARFDRDVLSQPGVRTVII 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 310 LHGVNDIGQTGTKEEADQV-AEELIAAYERMIADAHAAGILVYGATILPFGNSFYYTEPGEAARQKVNEWIRSGGWFDAV 388
Cdd:cd01830    81 LEGVNDIGASGTDFAAAPVtAEELIAGYRQLIRRAHARGIKVIGATITPFEGSGYYTPAREATRQAVNEWIRTSGAFDAV 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1711019391 389 IDFDRLMRDPDDPRLLLKEFHTGDFLHPNEAGYRMMGDAVDLKL 432
Cdd:cd01830   161 VDFDAALRDPADPSRLRPAYDSGDHLHPNDAGYQAMADAVDLDL 204
TesA COG2755
Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK [Cell cycle ...
224-428 1.05e-35

Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK [Cell cycle control, cell division, chromosome partitioning, Lipid transport and metabolism];


Pssm-ID: 442045 [Multi-domain]  Cd Length: 191  Bit Score: 130.15  E-value: 1.05e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 224 AQATAGSLVIIGNSITDGRGSGtnRQNRWPDILAERLIKNPPTsntgVLNQGIGGNCVLReclgppAIERFDRDVLgQHG 303
Cdd:COG2755     4 AAGKPLRIVALGDSITAGYGAS--RERGWPALLARRLAAADVR----VVNAGISGATTAD------LLARLDRDLL-ALK 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 304 VRWLIILHGVNDIGQTGTKEeadqvAEELIAAYERMIADAHAAG--ILVYGATILPFGNSfyytEPGEAARQKVNEWIRS 381
Cdd:COG2755    71 PDLVVIELGTNDLLRGLGVS-----PEEFRANLEALIDRLRAAGpgARVVLVTPPPRLRP----NYLNERIEAYNAAIRE 141
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1711019391 382 ----GGWfdAVIDFDRLMRDPDDprllLKEFHTGDFLHPNEAGYRMMGDAV 428
Cdd:COG2755   142 laaeYGV--PLVDLYAALRDAGD----LPDLLTADGLHPNAAGYRLIAEAV 186
Lipase_GDSL_2 pfam13472
GDSL-like Lipase/Acylhydrolase family; This family of presumed lipases and related enzymes are ...
233-422 1.01e-27

GDSL-like Lipase/Acylhydrolase family; This family of presumed lipases and related enzymes are similar to pfam00657.


Pssm-ID: 463889  Cd Length: 176  Bit Score: 108.40  E-value: 1.01e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 233 IIGNSITDGRGSgTNRQNRWPDILAERLIKNPPtsNTGVLNQGIGGNCVLRECLgppaiERFDRdvLGQHGVRWLIILHG 312
Cdd:pfam13472   1 ALGDSITAGYGA-TGGDRSYPGWLARLLARRLG--ADVVNNLGISGATTRLDLL-----ERLDD--VLRLKPDLVVILLG 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 313 VNDIGQTGTKEEADqvaeeliAAYERMIADAHAAG---ILVYGATILPFGNSFYYTEPGEAARQKVNEWIRS--GGWFDA 387
Cdd:pfam13472  71 TNDLGRGVSAARAA-------ANLEALIDALRAAGpdaRVLLIGPLPVGPPPPLDERRLNARIAEYNAAIREvaAERGVP 143
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1711019391 388 VIDFDRLMRDPDDPrllLKEFHTGDFLHPNEAGYR 422
Cdd:pfam13472 144 YVDLWDALRDDGGW---LPDLLADDGLHPNAAGYR 175
 
Name Accession Description Interval E-value
XynE_like cd01830
SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen ...
230-432 5.15e-110

SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


Pssm-ID: 238868  Cd Length: 204  Bit Score: 322.27  E-value: 5.15e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 230 SLVIIGNSITDGRGSGTNRQNRWPDILAERLIKNPPTSNTGVLNQGIGGNCVLRECLGPPAIERFDRDVLGQHGVRWLII 309
Cdd:cd01830     1 SVVALGDSITDGRGSTPDANNRWPDLLAARLAARAGTRGIAVLNAGIGGNRLLADGLGPSALARFDRDVLSQPGVRTVII 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 310 LHGVNDIGQTGTKEEADQV-AEELIAAYERMIADAHAAGILVYGATILPFGNSFYYTEPGEAARQKVNEWIRSGGWFDAV 388
Cdd:cd01830    81 LEGVNDIGASGTDFAAAPVtAEELIAGYRQLIRRAHARGIKVIGATITPFEGSGYYTPAREATRQAVNEWIRTSGAFDAV 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1711019391 389 IDFDRLMRDPDDPRLLLKEFHTGDFLHPNEAGYRMMGDAVDLKL 432
Cdd:cd01830   161 VDFDAALRDPADPSRLRPAYDSGDHLHPNDAGYQAMADAVDLDL 204
TesA COG2755
Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK [Cell cycle ...
224-428 1.05e-35

Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK [Cell cycle control, cell division, chromosome partitioning, Lipid transport and metabolism];


Pssm-ID: 442045 [Multi-domain]  Cd Length: 191  Bit Score: 130.15  E-value: 1.05e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 224 AQATAGSLVIIGNSITDGRGSGtnRQNRWPDILAERLIKNPPTsntgVLNQGIGGNCVLReclgppAIERFDRDVLgQHG 303
Cdd:COG2755     4 AAGKPLRIVALGDSITAGYGAS--RERGWPALLARRLAAADVR----VVNAGISGATTAD------LLARLDRDLL-ALK 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 304 VRWLIILHGVNDIGQTGTKEeadqvAEELIAAYERMIADAHAAG--ILVYGATILPFGNSfyytEPGEAARQKVNEWIRS 381
Cdd:COG2755    71 PDLVVIELGTNDLLRGLGVS-----PEEFRANLEALIDRLRAAGpgARVVLVTPPPRLRP----NYLNERIEAYNAAIRE 141
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1711019391 382 ----GGWfdAVIDFDRLMRDPDDprllLKEFHTGDFLHPNEAGYRMMGDAV 428
Cdd:COG2755   142 laaeYGV--PLVDLYAALRDAGD----LPDLLTADGLHPNAAGYRLIAEAV 186
Lipase_GDSL_2 pfam13472
GDSL-like Lipase/Acylhydrolase family; This family of presumed lipases and related enzymes are ...
233-422 1.01e-27

GDSL-like Lipase/Acylhydrolase family; This family of presumed lipases and related enzymes are similar to pfam00657.


Pssm-ID: 463889  Cd Length: 176  Bit Score: 108.40  E-value: 1.01e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 233 IIGNSITDGRGSgTNRQNRWPDILAERLIKNPPtsNTGVLNQGIGGNCVLRECLgppaiERFDRdvLGQHGVRWLIILHG 312
Cdd:pfam13472   1 ALGDSITAGYGA-TGGDRSYPGWLARLLARRLG--ADVVNNLGISGATTRLDLL-----ERLDD--VLRLKPDLVVILLG 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 313 VNDIGQTGTKEEADqvaeeliAAYERMIADAHAAG---ILVYGATILPFGNSFYYTEPGEAARQKVNEWIRS--GGWFDA 387
Cdd:pfam13472  71 TNDLGRGVSAARAA-------ANLEALIDALRAAGpdaRVLLIGPLPVGPPPPLDERRLNARIAEYNAAIREvaAERGVP 143
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1711019391 388 VIDFDRLMRDPDDPrllLKEFHTGDFLHPNEAGYR 422
Cdd:pfam13472 144 YVDLWDALRDDGGW---LPDLLADDGLHPNAAGYR 175
Lipase_GDSL pfam00657
GDSL-like Lipase/Acylhydrolase;
231-428 1.40e-23

GDSL-like Lipase/Acylhydrolase;


Pssm-ID: 459892 [Multi-domain]  Cd Length: 210  Bit Score: 98.03  E-value: 1.40e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 231 LVIIGNSITDGRGSGTNRQNRWPDILAERLIKN---PPTSNTGVLNQGIGGNCVLRECLGPPAIERFDRDVLGQHGVRWL 307
Cdd:pfam00657   1 IVAFGDSLTDGGGDGPGGRFSWGDLLADFLARKlgvPGSGYNHGANFAIGGATIEDLPIQLEQLLRLISDVKDQAKPDLV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 308 IILHGVNDIGQTG-----TKEEADQVAEELIAAYERMiaDAHAAGILVYGATIL----PFGNSFYYTEPGEAARQKVNEW 378
Cdd:pfam00657  81 TIFIGANDLCNFLssparSKKRVPDLLDELRANLPQL--GLGARKFWVHGLGPLgctpPKGCYELYNALAEEYNERLNEL 158
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1711019391 379 IRSGGWF---DAVIDFDrlMRDPDDPRLLLKEFHTG-DFLHPNEAGYRMMGDAV 428
Cdd:pfam00657 159 VNSLAAAaedANVVYVD--IYGFEDPTDPCCGIGLEpDGLHPSEKGYKAVAEAI 210
SGNH_hydrolase_like_4 cd04501
Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The ...
231-432 5.18e-20

Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.


Pssm-ID: 239945  Cd Length: 183  Bit Score: 87.00  E-value: 5.18e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 231 LVIIGNSITDGRGSGTnrQNRWPDILAErliknppTSNTGVLNQGIGGNcVLRECLgppaiERFDRDVLGQHGvRWLIIL 310
Cdd:cd04501     3 VVCLGDSITYGYPVGP--EASWVNLLAE-------FLGKEVINRGINGD-TTSQML-----VRFYEDVIALKP-AVVIIM 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 311 HGVNDIGQTGTKEEADQVAEEliaayerMIADAHAAGILVYGATILPFgNSFYYTEPGEAARQKV---NEWIRS----GG 383
Cdd:cd04501    67 GGTNDIIVNTSLEMIKDNIRS-------MVELAEANGIKVILASPLPV-DDYPWKPQWLRPANKLkslNRWLKDyareNG 138
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1711019391 384 WFdaVIDFDRLMRDPDDprLLLKEFHTGDFLHPNEAGYRMMGDAVDLKL 432
Cdd:cd04501   139 LL--FLDFYSPLLDERN--VGLKPGLLTDGLHPSREGYRVMAPLAEKAL 183
SGNH_hydrolase cd00229
SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary ...
231-428 5.53e-16

SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.


Pssm-ID: 238141 [Multi-domain]  Cd Length: 187  Bit Score: 75.91  E-value: 5.53e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 231 LVIIGNSITDGRGSGTNRQNRWPDILAERLIKNPPTSntgVLNQGIGGNCVLREclgppAIERFDRDVLGQHGVRWLIIL 310
Cdd:cd00229     1 ILVIGDSITAGYGASSGSTFYSLLLYLLLLAGGPGVE---VINLGVSGATTADA-----LRRLGLRLALLKDKPDLVIIE 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 311 HGVNDIGqTGTKEEADQVAEELIAAYERMIADAHAAGILVYGATILPFGNSFYYTEPGE--AARQKVNEWIRSGGWFDaV 388
Cdd:cd00229    73 LGTNDLG-RGGDTSIDEFKANLEELLDALRERAPGAKVILITPPPPPPREGLLGRALPRynEAIKAVAAENPAPSGVD-L 150
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1711019391 389 IDFDRLMRDPDdprlllKEFHTGDFLHPNEAGYRMMGDAV 428
Cdd:cd00229   151 VDLAALLGDED------KSLYSPDGIHPNPAGHKLIAEAL 184
SGNH_hydrolase_like_2 cd01834
SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The ...
231-427 3.03e-12

SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


Pssm-ID: 238872  Cd Length: 191  Bit Score: 65.01  E-value: 3.03e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 231 LVIIGNSITDGRGsgtnrqnrWPDILAERLIKNPPTSNTGVLNQGIGGNCVL-ReclgppaIERFDRDVLgQHGVRWLII 309
Cdd:cd01834     4 IVFIGNSITDRGG--------YVGYVETYLAARYPELKLTFRNLGWSGDTVSdL-------AARRDRDVL-PAKPDVVSI 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 310 LHGVNDIGQTGtkeEADQVAEELIAAYERMIA----DAHAAGI-LVYGATILPFGNSFYYTEPGEAARQKVNEWIRS--- 381
Cdd:cd01834    68 MFGINDSFRGF---DDPVGLEKFKTNLRRLIDrlknKESAPRIvLVSPIAYEANEDPLPDGAEYNANLAAYADAVRElaa 144
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1711019391 382 -GGWfdAVIDFDRLMRDpdDPRLLLKEFHTGDFLHPNEAGYRMMGDA 427
Cdd:cd01834   145 eNGV--AFVDLFTPMKE--AFQKAGEAVLTVDGVHPNEAGHRALARL 187
SGNH_hydrolase_like_6 cd01844
SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The ...
231-432 3.65e-08

SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


Pssm-ID: 238881  Cd Length: 177  Bit Score: 53.09  E-value: 3.65e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 231 LVIIGNSITDGRGS---GTNrqnrWPDILAERLiknpptsNTGVLNQGIGGNCvlrecLGPPAIERFDRDVLGQhgvrwL 307
Cdd:cd01844     2 WVFYGTSISQGACAsrpGMA----WTAILARRL-------GLEVINLGFSGNA-----RLEPEVAELLRDVPAD-----L 60
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 308 IILhgvnDIGQTGTKEEAdQVAEELIAAYeRMIADAH-AAGILVygatILPFGNSFYYTEPG-EAARQKVNEWIRSGgwf 385
Cdd:cd01844    61 YII----DCGPNIVGAEA-MVRERLGPLV-KGLRETHpDTPILL----VSPRYCPDAELTPGrGKLTLAVRRALREA--- 127
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1711019391 386 davidFDRLMRDPD------DPRLLLKEFH--TGDFLHPNEAGYRMMGDAVDLKL 432
Cdd:cd01844   128 -----FEKLRADGVpnlyylDGEELLGPDGeaLVDGIHPTDLGHMRYADRFEPVL 177
SGNH_hydrolase_like_1 cd01832
Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The ...
230-428 5.55e-08

Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.


Pssm-ID: 238870  Cd Length: 185  Bit Score: 52.66  E-value: 5.55e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 230 SLVIIGNSITDGRGSGT--NRQNRWPDILAERLIKNPPTSntGVLNQGIGGNcVLRECLG---PPAIE-RFDrdvlgqhg 303
Cdd:cd01832     1 RYVALGDSITEGVGDPVpdGGYRGWADRLAAALAAADPGI--EYANLAVRGR-RTAQILAeqlPAALAlRPD-------- 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 304 vrwLI-ILHGVNDIGQTGTkeEADQVAEELIAAYERmiADAHAAGILVYG----ATILPFGnsfyytePGEAARQKV-NE 377
Cdd:cd01832    70 ---LVtLLAGGNDILRPGT--DPDTYRADLEEAVRR--LRAAGARVVVFTipdpAVLEPFR-------RRVRARLAAyNA 135
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1711019391 378 WIRS-GGWFDAV-IDFDRlMRDPDDPRLLlkefhTGDFLHPNEAGYRMMGDAV 428
Cdd:cd01832   136 VIRAvAARYGAVhVDLWE-HPEFADPRLW-----ASDRLHPSAAGHARLAALV 182
Lysophospholipase_L1_like cd01822
Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this ...
229-428 6.06e-07

Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.


Pssm-ID: 238860 [Multi-domain]  Cd Length: 177  Bit Score: 49.43  E-value: 6.06e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 229 GSLVIIGNSITDGrgSGTNRQNRWPDILAERLIKNPPtsNTGVLNQGI------GGncvLReclgppaieRFDRdVLGQH 302
Cdd:cd01822     1 VTILALGDSLTAG--YGLPPEEGWPALLQKRLDARGI--DVTVINAGVsgdttaGG---LA---------RLPA-LLAQH 63
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 303 GVRWLIILHGVNDI--GQTgtkeeADQVAEELiaayERMIADAHAAGILV----------YGAtilPFGNSFYYTEPGEA 370
Cdd:cd01822    64 KPDLVILELGGNDGlrGIP-----PDQTRANL----RQMIETAQARGAPVllvgmqappnYGP---RYTRRFAAIYPELA 131
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 371 ARQKVnewirsggwfdAVIDF--DRLMRDPDdprlLLKEfhtgDFLHPNEAGYRMMGDAV 428
Cdd:cd01822   132 EEYGV-----------PLVPFflEGVAGDPE----LMQS----DGIHPNAEGQPIIAENV 172
XynB_like cd01833
SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted ...
307-427 8.33e-07

SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


Pssm-ID: 238871  Cd Length: 157  Bit Score: 48.39  E-value: 8.33e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 307 LIILH-GVNDIGQtgtKEEADQVAEELIAAYERMIADAHAAGILVygATILPFGNSfyytePGEAARQKVNEWIRsgGWF 385
Cdd:cd01833    43 VVLLHlGTNDLVL---NRDPDTAPDRLRALIDQMRAANPDVKIIV--ATLIPTTDA-----SGNARIAEYNAAIP--GVV 110
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1711019391 386 DAVIDFDRLMRDPDDPRLLLKEFHTGDFLHPNEAGYRMMGDA 427
Cdd:cd01833   111 ADLRTAGSPVVLVDMSTGYTTADDLYDGLHPNDQGYKKMADA 152
SGNH_hydrolase_YpmR_like cd04506
Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The ...
353-428 5.32e-05

Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.


Pssm-ID: 239947  Cd Length: 204  Bit Score: 44.16  E-value: 5.32e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1711019391 353 ATILPFG--NSFYYTEPGEAARQK-VNEWIRS----GGWFDAV--IDFDRLMRDPDDPRLLlkefhTGDFLHPNEAGYRM 423
Cdd:cd04506   122 APIFLVGlyNPFYVYFPNITEINDiVNDWNEAsqklASQYKNAyfVPIFDLFSDGQNKYLL-----TSDHFHPNDKGYQL 196

                  ....*
gi 1711019391 424 MGDAV 428
Cdd:cd04506   197 IADRV 201
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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