NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1715399117|gb|TWA32968|]
View 

cell division protein FtsZ [Sinorhizobium medicae]

Protein Classification

cell division protein FtsZ( domain architecture ID 11415192)

cell division protein FtsZ assembles into a Z ring that provides the framework for the cell division apparatus

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
FtsZ COG0206
Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];
10-340 3.28e-151

Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 439976 [Multi-domain]  Cd Length: 347  Bit Score: 428.77  E-value: 3.28e-151
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  10 TEMRPKITVIGVGGGGGNAINNMIAENLQGVDFIAANTDAQALATSKAERRIQLGAAITEGLGAGSVPDIGNAAAQESID 89
Cdd:COG0206     8 EELKAKIKVIGVGGGGGNAVNRMIEAGLEGVEFIAANTDAQALENSKAPTKIQLGEKLTRGLGAGANPEVGRKAAEESRE 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  90 EIMDHLGGTHMCFVTAGMGGGTGTGAAPVIAEAARRAGILTVAVVTKPFSFEGQRRMQTAELGVDRLRESADTVIVIPNQ 169
Cdd:COG0206    88 EIREALEGADMVFITAGMGGGTGTGAAPVIAEIAKELGALTVGVVTKPFSFEGKRRMRQAEEGIEELRKYVDTLIVIPND 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 170 NLFRIADAKTTFADAFMIADRVLYSGVSCITDLIVKEGLMNLDFADVKTVMKGMGRAMMGTGEATGENRAMMAAEAAIAN 249
Cdd:COG0206   168 KLLEVADKNTPLLEAFKKADDVLRQAVQGITDLITKPGLINLDFADVKTVMSNGGVALMGIGEASGENRAEEAAEKAISS 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 250 PLLDEVSMRGAKGVLVSISGGMDMTLFEVDEAATRIREEVYDEADIVVGAIFDRSLDGTFRVSVVATGLDGNRGAQATAP 329
Cdd:COG0206   248 PLLEDVSISGAKGVLVNITGGSDLTLDEVNEAAEIIQEEADPDANIIFGAVIDESLGDEIRVTVIATGFDSEAIVGEEET 327
                         330
                  ....*....|.
gi 1715399117 330 EAMNGQAAAVP 340
Cdd:COG0206   328 ERPLEETEPAE 338
 
Name Accession Description Interval E-value
FtsZ COG0206
Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];
10-340 3.28e-151

Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 439976 [Multi-domain]  Cd Length: 347  Bit Score: 428.77  E-value: 3.28e-151
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  10 TEMRPKITVIGVGGGGGNAINNMIAENLQGVDFIAANTDAQALATSKAERRIQLGAAITEGLGAGSVPDIGNAAAQESID 89
Cdd:COG0206     8 EELKAKIKVIGVGGGGGNAVNRMIEAGLEGVEFIAANTDAQALENSKAPTKIQLGEKLTRGLGAGANPEVGRKAAEESRE 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  90 EIMDHLGGTHMCFVTAGMGGGTGTGAAPVIAEAARRAGILTVAVVTKPFSFEGQRRMQTAELGVDRLRESADTVIVIPNQ 169
Cdd:COG0206    88 EIREALEGADMVFITAGMGGGTGTGAAPVIAEIAKELGALTVGVVTKPFSFEGKRRMRQAEEGIEELRKYVDTLIVIPND 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 170 NLFRIADAKTTFADAFMIADRVLYSGVSCITDLIVKEGLMNLDFADVKTVMKGMGRAMMGTGEATGENRAMMAAEAAIAN 249
Cdd:COG0206   168 KLLEVADKNTPLLEAFKKADDVLRQAVQGITDLITKPGLINLDFADVKTVMSNGGVALMGIGEASGENRAEEAAEKAISS 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 250 PLLDEVSMRGAKGVLVSISGGMDMTLFEVDEAATRIREEVYDEADIVVGAIFDRSLDGTFRVSVVATGLDGNRGAQATAP 329
Cdd:COG0206   248 PLLEDVSISGAKGVLVNITGGSDLTLDEVNEAAEIIQEEADPDANIIFGAVIDESLGDEIRVTVIATGFDSEAIVGEEET 327
                         330
                  ....*....|.
gi 1715399117 330 EAMNGQAAAVP 340
Cdd:COG0206   328 ERPLEETEPAE 338
PRK13018 PRK13018
cell division protein FtsZ; Provisional
1-342 2.51e-147

cell division protein FtsZ; Provisional


Pssm-ID: 237273 [Multi-domain]  Cd Length: 378  Bit Score: 420.19  E-value: 2.51e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117   1 MTEYKKPVITEMR---------------PKITVIGVGGGGGNAINNMIAENLQGVDFIAANTDAQALATSKAERRIQLGA 65
Cdd:PRK13018    1 MQDLVKEALIDSEqekeekkasdddfgnPKIVVVGCGGAGNNTINRLYEIGIEGAETIAINTDAQHLAMIKADKKILIGK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  66 AITEGLGAGSVPDIGNAAAQESIDEIMDHLGGTHMCFVTAGMGGGTGTGAAPVIAEAARRAGILTVAVVTKPFSFEGQRR 145
Cdd:PRK13018   81 SLTRGLGAGGDPEVGRKAAEESRDEIKEVLKGADLVFVTAGMGGGTGTGAAPVVAEIAKEQGALVVGVVTKPFKFEGRAR 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 146 MQTAELGVDRLRESADTVIVIPNQNLFRIAdAKTTFADAFMIADRVLYSGVSCITDLIVKEGLMNLDFADVKTVMKGMGR 225
Cdd:PRK13018  161 MQKAEEGIERLREAADTVIVIDNNRLLDIV-PNLPIADAFSVADEVIAETVKGITETITKPSLINLDFADVKSVMKGGGV 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 226 AMMGTGEATGENRAMMAAEAAIANPLLDeVSMRGAKGVLVSISGGMDMTLFEVDEAATRIREEVYDEADIVVGAIFDRSL 305
Cdd:PRK13018  240 AMMGVGEAKGQNRAMEAVRAALANPLLD-VDYRGAKGALVHITGGPDLTLKEANEAASRITEELDPEANIIWGARIDPDM 318
                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 1715399117 306 DGTFRVSVVATGLDGNRGAQATAPEAMNGQAAAVPTR 342
Cdd:PRK13018  319 EGKVRVMVIMTGVKSAQILGPGTQPQAIISRRSGERS 355
FtsZ_type1 cd02201
Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the ...
27-317 1.34e-130

Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.


Pssm-ID: 276961 [Multi-domain]  Cd Length: 303  Bit Score: 374.81  E-value: 1.34e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  27 NAINNMIAENLQGVDFIAANTDAQALATSKAERRIQLGAAITEGLGAGSVPDIGNAAAQESIDEIMDHLGGTHMCFVTAG 106
Cdd:cd02201    14 NAVNRMIESGLEGVEFIAINTDAQALEKSKAPNKIQIGEKLTRGLGAGGDPEVGRKAAEESREEIKEALKGADMVFITAG 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 107 MGGGTGTGAAPVIAEAARRAGILTVAVVTKPFSFEGQRRMQTAELGVDRLRESADTVIVIPNQNLFRIADAKTTFADAFM 186
Cdd:cd02201    94 MGGGTGTGAAPVIAKIAKEMGALTVAVVTLPFSFEGKKRMRNAEEGLEELKKYVDTLIVIPNDKLLEIVGKNLPLLEAFK 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 187 IADRVLYSGVSCITDLIVKEGLMNLDFADVKTVMKGMGRAMMGTGEATGENRAMMAAEAAIANPLLdEVSMRGAKGVLVS 266
Cdd:cd02201   174 KADEVLAQAVKGITDLITKPGLINLDFADVKTVMKNGGLALMGIGEASGENRAEEAVEKALNSPLL-EDDIKGAKGVLVN 252
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1715399117 267 ISGGMDMTLFEVDEAATRIREEVYDEADIVVGAIFDRSLDGTFRVSVVATG 317
Cdd:cd02201   253 ITGGPDLTLEEVNEAAEIITEKADPDANIIFGAVIDEELGDEIRVTVIATG 303
ftsZ TIGR00065
cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found ...
13-318 3.01e-105

cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis. [Cellular processes, Cell division]


Pssm-ID: 272884 [Multi-domain]  Cd Length: 349  Bit Score: 312.33  E-value: 3.01e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  13 RPKITVIGVGGGGGNAINNMIAENLQGVDFIAANTDAQALATSKAERRIQLGAAITEGLGAGSVPDIGNAAAQESIDEIM 92
Cdd:TIGR00065  17 KAKIKVIGVGGGGNNTVNRMLEEGVEGVEFIAINTDAQHLKTTKADKKILIGKKLTRGLGAGGNPEIGRKAAEESRDEIR 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  93 DHLGGTHMCFVTAGMGGGTGTGAAPVIAEAARRAGILTVAVVTKPFSFEGQRRMQTAELGVDRLRESADTVIVIPNQNLF 172
Cdd:TIGR00065  97 KLLEGADMVFITAGMGGGTGTGAAPVVAKIAKELGALTVAVVTKPFKFEGLKRRKKAEEGLERLKQAVDTLIVIPNDKLL 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 173 RIADAKTTfADAFMIADRVLYSGVSCITDLIVKEGLMNLDFADVKTVMKGMGRAMMGTGEATGE---NRAMMAAEAAIAN 249
Cdd:TIGR00065 177 EVVPNLPL-NDAFKVADDVLVRAVKGISELITKPGLINIDFADVRAVMSGGGVAMMGIGEALGEdtaNRAFEAVRKALSS 255
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1715399117 250 PLLDEVSMRGAKGVLVSISGGMDMTLFEVDEAATRIREEVYDEADIVVGAIFDRSLDGTFRVSVVATGL 318
Cdd:TIGR00065 256 PLLDVDKISGAKGALVHITGGADLTLLEAEEIQEIITSELDQDANIIWGAIIDPNLEDEIRVTIVATGV 324
Tubulin smart00864
Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the ...
15-207 9.29e-65

Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.


Pssm-ID: 214867 [Multi-domain]  Cd Length: 192  Bit Score: 203.10  E-value: 9.29e-65
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117   15 KITVIGVGGGGGNAINNMIAENlqGVDFIAANTDAQALAT-SKAERRIQLGAAITEGLGAGSVPDIGNAAAQESIDEIMD 93
Cdd:smart00864   1 KIKVFGVGGGGPNAVNVDLEPG--VIDGVRANTDAQALNPeSLASGKIQAGNNWTRGLGAGADPEVGREAAEESLDEIRE 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117   94 HLGGTHMCFVTAGMGGGTGTGAAPVIAEAARRAGILTVAVVTKPFSFEGQRRMQTAELGVDRLRESADTVIVIPNQNLFR 173
Cdd:smart00864  79 ELEGADGVFITAGMGGGTGTGAAPVIAEIAKEYGILTVAVVTKPFSFEGVVRPYNAELGLEELREHVDSLIVIDNDALLD 158
                          170       180       190
                   ....*....|....*....|....*....|....
gi 1715399117  174 IADAKTTFADAFMIADRVLYSGVSCITDLIVKEG 207
Cdd:smart00864 159 ICGRKLPLRPAFKDANDLLAQAVSGITDLIRFPG 192
FtsZ_C pfam12327
FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. ...
224-319 2.65e-35

FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ is a GTPase, like tubulin. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea.


Pssm-ID: 463534 [Multi-domain]  Cd Length: 95  Bit Score: 123.85  E-value: 2.65e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 224 GRAMMGTGEATGENRAMMAAEAAIANPLLDeVSMRGAKGVLVSISGGMDMTLFEVDEAATRIREEVYDEADIVVGAIFDR 303
Cdd:pfam12327   1 GVAMMGTGEASGENRAEEAAEAAISSPLLD-VDLSGARGVLVNITGGPDLTLFEANEAAETIREEVDPDANIIFGTVIDP 79
                          90
                  ....*....|....*.
gi 1715399117 304 SLDGTFRVSVVATGLD 319
Cdd:pfam12327  80 ELEDEIRVTVVATGID 95
 
Name Accession Description Interval E-value
FtsZ COG0206
Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];
10-340 3.28e-151

Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 439976 [Multi-domain]  Cd Length: 347  Bit Score: 428.77  E-value: 3.28e-151
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  10 TEMRPKITVIGVGGGGGNAINNMIAENLQGVDFIAANTDAQALATSKAERRIQLGAAITEGLGAGSVPDIGNAAAQESID 89
Cdd:COG0206     8 EELKAKIKVIGVGGGGGNAVNRMIEAGLEGVEFIAANTDAQALENSKAPTKIQLGEKLTRGLGAGANPEVGRKAAEESRE 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  90 EIMDHLGGTHMCFVTAGMGGGTGTGAAPVIAEAARRAGILTVAVVTKPFSFEGQRRMQTAELGVDRLRESADTVIVIPNQ 169
Cdd:COG0206    88 EIREALEGADMVFITAGMGGGTGTGAAPVIAEIAKELGALTVGVVTKPFSFEGKRRMRQAEEGIEELRKYVDTLIVIPND 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 170 NLFRIADAKTTFADAFMIADRVLYSGVSCITDLIVKEGLMNLDFADVKTVMKGMGRAMMGTGEATGENRAMMAAEAAIAN 249
Cdd:COG0206   168 KLLEVADKNTPLLEAFKKADDVLRQAVQGITDLITKPGLINLDFADVKTVMSNGGVALMGIGEASGENRAEEAAEKAISS 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 250 PLLDEVSMRGAKGVLVSISGGMDMTLFEVDEAATRIREEVYDEADIVVGAIFDRSLDGTFRVSVVATGLDGNRGAQATAP 329
Cdd:COG0206   248 PLLEDVSISGAKGVLVNITGGSDLTLDEVNEAAEIIQEEADPDANIIFGAVIDESLGDEIRVTVIATGFDSEAIVGEEET 327
                         330
                  ....*....|.
gi 1715399117 330 EAMNGQAAAVP 340
Cdd:COG0206   328 ERPLEETEPAE 338
PRK13018 PRK13018
cell division protein FtsZ; Provisional
1-342 2.51e-147

cell division protein FtsZ; Provisional


Pssm-ID: 237273 [Multi-domain]  Cd Length: 378  Bit Score: 420.19  E-value: 2.51e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117   1 MTEYKKPVITEMR---------------PKITVIGVGGGGGNAINNMIAENLQGVDFIAANTDAQALATSKAERRIQLGA 65
Cdd:PRK13018    1 MQDLVKEALIDSEqekeekkasdddfgnPKIVVVGCGGAGNNTINRLYEIGIEGAETIAINTDAQHLAMIKADKKILIGK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  66 AITEGLGAGSVPDIGNAAAQESIDEIMDHLGGTHMCFVTAGMGGGTGTGAAPVIAEAARRAGILTVAVVTKPFSFEGQRR 145
Cdd:PRK13018   81 SLTRGLGAGGDPEVGRKAAEESRDEIKEVLKGADLVFVTAGMGGGTGTGAAPVVAEIAKEQGALVVGVVTKPFKFEGRAR 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 146 MQTAELGVDRLRESADTVIVIPNQNLFRIAdAKTTFADAFMIADRVLYSGVSCITDLIVKEGLMNLDFADVKTVMKGMGR 225
Cdd:PRK13018  161 MQKAEEGIERLREAADTVIVIDNNRLLDIV-PNLPIADAFSVADEVIAETVKGITETITKPSLINLDFADVKSVMKGGGV 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 226 AMMGTGEATGENRAMMAAEAAIANPLLDeVSMRGAKGVLVSISGGMDMTLFEVDEAATRIREEVYDEADIVVGAIFDRSL 305
Cdd:PRK13018  240 AMMGVGEAKGQNRAMEAVRAALANPLLD-VDYRGAKGALVHITGGPDLTLKEANEAASRITEELDPEANIIWGARIDPDM 318
                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 1715399117 306 DGTFRVSVVATGLDGNRGAQATAPEAMNGQAAAVPTR 342
Cdd:PRK13018  319 EGKVRVMVIMTGVKSAQILGPGTQPQAIISRRSGERS 355
FtsZ_type1 cd02201
Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the ...
27-317 1.34e-130

Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.


Pssm-ID: 276961 [Multi-domain]  Cd Length: 303  Bit Score: 374.81  E-value: 1.34e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  27 NAINNMIAENLQGVDFIAANTDAQALATSKAERRIQLGAAITEGLGAGSVPDIGNAAAQESIDEIMDHLGGTHMCFVTAG 106
Cdd:cd02201    14 NAVNRMIESGLEGVEFIAINTDAQALEKSKAPNKIQIGEKLTRGLGAGGDPEVGRKAAEESREEIKEALKGADMVFITAG 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 107 MGGGTGTGAAPVIAEAARRAGILTVAVVTKPFSFEGQRRMQTAELGVDRLRESADTVIVIPNQNLFRIADAKTTFADAFM 186
Cdd:cd02201    94 MGGGTGTGAAPVIAKIAKEMGALTVAVVTLPFSFEGKKRMRNAEEGLEELKKYVDTLIVIPNDKLLEIVGKNLPLLEAFK 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 187 IADRVLYSGVSCITDLIVKEGLMNLDFADVKTVMKGMGRAMMGTGEATGENRAMMAAEAAIANPLLdEVSMRGAKGVLVS 266
Cdd:cd02201   174 KADEVLAQAVKGITDLITKPGLINLDFADVKTVMKNGGLALMGIGEASGENRAEEAVEKALNSPLL-EDDIKGAKGVLVN 252
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1715399117 267 ISGGMDMTLFEVDEAATRIREEVYDEADIVVGAIFDRSLDGTFRVSVVATG 317
Cdd:cd02201   253 ITGGPDLTLEEVNEAAEIITEKADPDANIIFGAVIDEELGDEIRVTVIATG 303
ftsZ TIGR00065
cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found ...
13-318 3.01e-105

cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis. [Cellular processes, Cell division]


Pssm-ID: 272884 [Multi-domain]  Cd Length: 349  Bit Score: 312.33  E-value: 3.01e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  13 RPKITVIGVGGGGGNAINNMIAENLQGVDFIAANTDAQALATSKAERRIQLGAAITEGLGAGSVPDIGNAAAQESIDEIM 92
Cdd:TIGR00065  17 KAKIKVIGVGGGGNNTVNRMLEEGVEGVEFIAINTDAQHLKTTKADKKILIGKKLTRGLGAGGNPEIGRKAAEESRDEIR 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  93 DHLGGTHMCFVTAGMGGGTGTGAAPVIAEAARRAGILTVAVVTKPFSFEGQRRMQTAELGVDRLRESADTVIVIPNQNLF 172
Cdd:TIGR00065  97 KLLEGADMVFITAGMGGGTGTGAAPVVAKIAKELGALTVAVVTKPFKFEGLKRRKKAEEGLERLKQAVDTLIVIPNDKLL 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 173 RIADAKTTfADAFMIADRVLYSGVSCITDLIVKEGLMNLDFADVKTVMKGMGRAMMGTGEATGE---NRAMMAAEAAIAN 249
Cdd:TIGR00065 177 EVVPNLPL-NDAFKVADDVLVRAVKGISELITKPGLINIDFADVRAVMSGGGVAMMGIGEALGEdtaNRAFEAVRKALSS 255
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1715399117 250 PLLDEVSMRGAKGVLVSISGGMDMTLFEVDEAATRIREEVYDEADIVVGAIFDRSLDGTFRVSVVATGL 318
Cdd:TIGR00065 256 PLLDVDKISGAKGALVHITGGADLTLLEAEEIQEIITSELDQDANIIWGAIIDPNLEDEIRVTIVATGV 324
Tubulin smart00864
Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the ...
15-207 9.29e-65

Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.


Pssm-ID: 214867 [Multi-domain]  Cd Length: 192  Bit Score: 203.10  E-value: 9.29e-65
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117   15 KITVIGVGGGGGNAINNMIAENlqGVDFIAANTDAQALAT-SKAERRIQLGAAITEGLGAGSVPDIGNAAAQESIDEIMD 93
Cdd:smart00864   1 KIKVFGVGGGGPNAVNVDLEPG--VIDGVRANTDAQALNPeSLASGKIQAGNNWTRGLGAGADPEVGREAAEESLDEIRE 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117   94 HLGGTHMCFVTAGMGGGTGTGAAPVIAEAARRAGILTVAVVTKPFSFEGQRRMQTAELGVDRLRESADTVIVIPNQNLFR 173
Cdd:smart00864  79 ELEGADGVFITAGMGGGTGTGAAPVIAEIAKEYGILTVAVVTKPFSFEGVVRPYNAELGLEELREHVDSLIVIDNDALLD 158
                          170       180       190
                   ....*....|....*....|....*....|....
gi 1715399117  174 IADAKTTFADAFMIADRVLYSGVSCITDLIVKEG 207
Cdd:smart00864 159 ICGRKLPLRPAFKDANDLLAQAVSGITDLIRFPG 192
FtsZ_CetZ-like cd02191
Subfamily of FitZ and Cell-structure-related euryarchaeota tubulin/FtsZ homolog-like; FtsZ is ...
15-317 8.04e-56

Subfamily of FitZ and Cell-structure-related euryarchaeota tubulin/FtsZ homolog-like; FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. CetZ-like proteins are related to tubulin and FtsZ and co-exists with FtsZ in many archaea. However, a recent study found that Cetz proteins (formerly annotated FtsZ type 2) are not required for cell division. Instead, CetZ proteins are shown to be involved in controlling archaeal cell shape dynamics. The results from inactivation studies of CetZ proteins in Haloferax volcanii suggest that CetZ1 is essential for normal swimming motility and rod-cell development.


Pssm-ID: 276960 [Multi-domain]  Cd Length: 308  Bit Score: 184.30  E-value: 8.04e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  15 KITVIGVGGGGGNAINNMIAENLQ-----GVDFIAANTDAQALATSKAERRIQLGAAITEGLGAGSVPDIGNAAAQESID 89
Cdd:cd02191     2 KIVVIGVGQAGGNLASALQSFDREtgfgaGVETVAINTAAQDLKSLKAKETLLIGQDRTNGHGVGGNPELGAQAAEEDQE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  90 EIMDHLGGTH---MCFVTAGMGGGTGTGAAPVIAEAARRAGI-LTVAVVTKPFSFEGQRRMQTAELGVDRLRESADTVIV 165
Cdd:cd02191    82 EIMEALEGRVeadMIFVTTGLGGGTGSGGAPVLAEALKKVYDvLTVAVVTLPFADEGALYMQNAGEGLRTLAEEADALIL 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 166 IPNQNLFRIADaktTFADAFMIADRVLYSGVSCITDLIVKEGLMNLDFADVKTVMKGMGRAMMGTGEATG-ENRAMMAAE 244
Cdd:cd02191   162 VDNEKLRSIGG---SLSEAYDAINEVLARRVGGLLEAIEATGLSVVDFADVKTVMNSGGMAMLGYGSADAsINRAREATR 238
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1715399117 245 AAIANPLLDeVSMRGAKGVLVSISGGMDMTLFEVDEAATRIREEVYDEADIVVGAIFDRslDGTFRVSVVATG 317
Cdd:cd02191   239 RALRTPLLL-PDASGADGALVVIAGEPDTLPLKEVERVRRWVEDETGSATVRGGDVIDE--SGRLRVLVVLTG 308
Tubulin_C smart00865
Tubulin/FtsZ family, C-terminal domain; This domain is found in the tubulin alpha, beta and ...
209-319 5.49e-39

Tubulin/FtsZ family, C-terminal domain; This domain is found in the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. These proteins are GTPases and are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea. This is the C-terminal domain.


Pssm-ID: 214868 [Multi-domain]  Cd Length: 120  Bit Score: 134.21  E-value: 5.49e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  209 MNLDFADVKTVMKGMGRAMMGTGEATGENRAMMAAEAAIANPLLDEVSMRGAKGVLVSISGGMDMTLFEVDEAATRIREE 288
Cdd:smart00865   1 INVDFADVKTVMVPMGFAMMGIGPASGENRALEAAELAISSPLLEDSNIMGAKGVLVNITGGPDLTLKEVNEAMERIREK 80
                           90       100       110
                   ....*....|....*....|....*....|..
gi 1715399117  289 VYDEADIVVGAIFDRSL-DGTFRVSVVATGLD 319
Cdd:smart00865  81 ADPDAFIIWGPVIDEELgGDEIRVTVIATGIG 112
FtsZ_C pfam12327
FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. ...
224-319 2.65e-35

FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ is a GTPase, like tubulin. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea.


Pssm-ID: 463534 [Multi-domain]  Cd Length: 95  Bit Score: 123.85  E-value: 2.65e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 224 GRAMMGTGEATGENRAMMAAEAAIANPLLDeVSMRGAKGVLVSISGGMDMTLFEVDEAATRIREEVYDEADIVVGAIFDR 303
Cdd:pfam12327   1 GVAMMGTGEASGENRAEEAAEAAISSPLLD-VDLSGARGVLVNITGGPDLTLFEANEAAETIREEVDPDANIIFGTVIDP 79
                          90
                  ....*....|....*.
gi 1715399117 304 SLDGTFRVSVVATGLD 319
Cdd:pfam12327  80 ELEDEIRVTVVATGID 95
Tubulin pfam00091
Tubulin/FtsZ family, GTPase domain; This family includes the tubulin alpha, beta and gamma ...
43-176 2.78e-29

Tubulin/FtsZ family, GTPase domain; This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.


Pssm-ID: 459669 [Multi-domain]  Cd Length: 190  Bit Score: 111.16  E-value: 2.78e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  43 IAANTDAQALATSKA---ERRIQLGAAITEGLGAGSVPDIGNAAAQESIDEIMDHLGGTHMC---FVTAGMGGGTGTGAA 116
Cdd:pfam00091  48 LAIDTDPQALNEIKAgfnPNKILLGKEGTGGNGAGGYPEIGREAAEESLEEIRKEVEGCDMLqgfFITASLGGGTGSGAA 127
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1715399117 117 PVIAEAARR--AGILTVAVVTKPFSF-EGQRRMQTAELGVDRLRESADTVIVIPNQNLFRIAD 176
Cdd:pfam00091 128 PVIAEILKElyPGALTVAVVTFPFGFsEGVVRPYNAILGLKELIEHSDSVIVIDNDALYDICD 190
Tubulin_FtsZ_Cetz-like cd00286
Tubulin protein family of FtsZ and CetZ-like; This family includes tubulin alpha-, beta-, ...
67-317 6.24e-14

Tubulin protein family of FtsZ and CetZ-like; This family includes tubulin alpha-, beta-, gamma-, delta-, epsilon, and zeta-tubulins as well as FtsZ and CetZ, all of which are involved in polymer formation. Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts. A recent study found that CetZ proteins, formerly annotated FtsZ type 2, are not required for cell division, whereas FtsZ proteins play an important role. Instead, CetZ proteins are shown to be involved in controlling archaeal cell shape dynamics. The results from inactivation studies of CetZ proteins in Haloferax volcanii suggest that CetZ1 is essential for normal swimming motility and rod-cell development.


Pssm-ID: 276954 [Multi-domain]  Cd Length: 332  Bit Score: 71.67  E-value: 6.24e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  67 ITEGLGAGSVPDIGNAAA-QESIDEIMD-------HLGGTHMCFVTAGMGGGTGTGAAPVIAEAARR--AGILTVAVVTK 136
Cdd:cd00286    52 IQKYHGAGNNWAKGHSVAgEEYQEEILDairkeveECDELQGFFITHSLGGGTGSGLGPLLAERLKDeyPNRLVVTFSIL 131
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 137 PFSFEGQR-RMQTAELGVDRLRESADTVIVIPNQNLFRI-ADAKTTFADAFMIADRVLYSGVSCITDLIVKEGLMNLDF- 213
Cdd:cd00286   132 PGPDEGVIvYPYNAALTLKTLTEHADCLLLVDNEALYDIcPRPLHIDAPAYDHINELVAQRLGSLTEALRFEGSLNVDLr 211
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 214 --ADVKTVMKGMGRAMMGTGEATGE-------NRAMMAAEAAIANPLLDE---VSMRGAKGVLVSISGGMDMTLFEVDEA 281
Cdd:cd00286   212 elAENLVPLPRGHFLMLGYAPLDSAtsatprsLRVKELTRRAFLPANLLVgcdPDHGEAIAALLVIRGPPDLSSKEVERA 291
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1715399117 282 ATRIREE-----VYDEADIVVGAIFDRSLDGTFRVSVVATG 317
Cdd:cd00286   292 IARVKETlghlfSWSPAGVKTGISPKPPAEGEVSVLALLNS 332
CetZ_tubulin-like cd02202
Cell-structure-related euryarchaeota tubulin/FtsZ homologs; CetZ proteins comprise a distinct ...
40-234 1.10e-09

Cell-structure-related euryarchaeota tubulin/FtsZ homologs; CetZ proteins comprise a distinct tubulin/FtsZ family. The crystal structures of CetZ contain the FtsZ/tubulin superfamily fold and its family members have mosaic of tubulin-like and FtsZ-like amino acid residues. However, a recent study found that CetZ proteins (formerly annotated FtsZ type 2) are not required for cell division, whereas FtsZ proteins play an important role. Instead, CetZ proteins are shown to be involved in controlling archaeal cell shape dynamics. The results from inactivation studies of CetZ proteins in Haloferax volcanii suggest that CetZ1 is essential for normal swimming motility and rod-cell development.


Pssm-ID: 276962 [Multi-domain]  Cd Length: 357  Bit Score: 59.18  E-value: 1.10e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117  40 VDFIAANTDAQALA---TSKAERRIQLGAAITEGLGAGSVPDIGNAAAQESIDEIMD-----HLGGTHMCFVTAGMGGGT 111
Cdd:cd02202    32 VNALAVNTDRADLSgldHIPEERRILIGDTETGGHGVGGDNELGAEVAEEDIDELLRaldtaPFSEADAFLVVAGLGGGT 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1715399117 112 GTGAAPVIAEA-ARRAGILTVAVVTKPFSFEGQRRMQTAELGVDRLRESADTVIVIPNQNLFR-IADAKTTFADA-FMIA 188
Cdd:cd02202   112 GSGAAPVLAEElKERYDKPVYALGVLPAAEEGGRYALNAARSLRSLVELADAVILFDNDAWRRsGESIAEAYDRInEEIA 191
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1715399117 189 DRV---LYSGVScitDLIVKEGLMNLDFADVKTVMKGMGRAMMGTGEAT 234
Cdd:cd02202   192 ERLgalLAAGEV---DAPKSVGESVLDASDIINTLSGGGVATIGYASED 237
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH