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Conserved domains on  [gi|1730469723|gb|TYE51143|]
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F0F1 ATP synthase subunit delta [Klebsiella michiganensis]

Protein Classification

FoF1 ATP synthase subunit delta( domain architecture ID 10012586)

F0F1 ATP synthase subunit delta is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Gene Ontology:  GO:0046933|GO:0015986|GO:0045261
PubMed:  30901262
SCOP:  3000714

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-177 5.84e-83

F0F1 ATP synthase subunit delta; Validated


:

Pssm-ID: 235593  Cd Length: 177  Bit Score: 242.38  E-value: 5.84e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723   1 MSEFVTVARPYAKAAFDFAVEHNSVERWQDMLAFVAEVTKNEEMAELLSGALAPETLSDVFIAVCGEQLDENGQNLIRVM 80
Cdd:PRK05758    1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723  81 AENGRLKALPDVLEQFIHLRAASEATAEVEVISAAQMSDEQLAKITAAMEKRLSRKVKLNCKIDKSVMAGVIIRSGDMVI 160
Cdd:PRK05758   81 AENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVKLNEKVDPSLIGGVIIKVGDRVI 160

                         170
                  ....*....|....*..
gi 1730469723 161 DGSVRGRLERLADVLQS 177
Cdd:PRK05758  161 DGSVRGKLERLKDALKS 177
 
Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-177 5.84e-83

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 242.38  E-value: 5.84e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723   1 MSEFVTVARPYAKAAFDFAVEHNSVERWQDMLAFVAEVTKNEEMAELLSGALAPETLSDVFIAVCGEQLDENGQNLIRVM 80
Cdd:PRK05758    1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723  81 AENGRLKALPDVLEQFIHLRAASEATAEVEVISAAQMSDEQLAKITAAMEKRLSRKVKLNCKIDKSVMAGVIIRSGDMVI 160
Cdd:PRK05758   81 AENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVKLNEKVDPSLIGGVIIKVGDRVI 160

                         170
                  ....*....|....*..
gi 1730469723 161 DGSVRGRLERLADVLQS 177
Cdd:PRK05758  161 DGSVRGKLERLKDALKS 177
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 7-175 1.41e-76

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 226.04  E-value: 1.41e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723   7 VARPYAKAAFDFAVEHNSVERWQDMLAFVAEVTKN-EEMAELLSG-ALAPETLSDVFIAVCGEQLDENGQNLIRVMAENG 84
Cdd:TIGR01145   1 VARPYAKALFEIANEKSSLEEWGEMLNFVKEVLKNnKELKKFLSNpLISAEKKKEFIKNVFGEQLDESSLNLLLLLAENG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723  85 RLKALPDVLEQFIHLRAASEATAEVEVISAAQMSDEQLAKITAAMEKRLSR-KVKLNCKIDKSVMAGVIIRSGDMVIDGS 163
Cdd:TIGR01145  81 RLAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAaKVKLNCKVDKDLIGGVIIRIGDRVIDGS 160

                         170
                  ....*....|..
gi 1730469723 164 VRGRLERLADVL 175
Cdd:TIGR01145 161 VRGQLKRLSRQL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 6-177 1.71e-62

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 190.75  E-value: 1.71e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723   6 TVARPYAKAAFDFAVEHNSVERWQDMLAFVAE-VTKNEEMAELL-SGALAPETLSDVFIAVCGEQLDENGQNLIRVMAEN 83
Cdd:COG0712     5 TIARRYAKALFELAKEKGALDEVEEELFALAAlLAENPELRALLsSPVISAEEKKELLEALFGGKLSPETLNFLKLLVEN 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723  84 GRLKALPDVLEQFIHLRAASEATAEVEVISAAQMSDEQLAKITAAMEKRLSRKVKLNCKIDKSVMAGVIIRSGDMVIDGS 163
Cdd:COG0712    85 GRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKTGKKVELNVKVDPSLIGGVVVRVGDKVIDGS 164

                         170
                  ....*....|....
gi 1730469723 164 VRGRLERLADVLQS 177
Cdd:COG0712   165 VRGRLNRLRRALKG 178
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 7-175 9.68e-58

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 178.48  E-value: 9.68e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723   7 VARPYAKAAFDFAVEHNSVERWQDML-AFVAEVTKNEEMAELLSG-ALAPETLSDVFIAVCGEQLDENGQNLIRVMAENG 84
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELeALEAALAENPDLAAFLSNpTISAEEKKALLLELFKGLLSPLTLNFLKLLAENG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723  85 RLKALPDVLEQFIHLRAASEATAEVEVISAAQMSDEQLAKITAAMEKRLSR-KVKLNCKIDKSVMAGVIIRSGDMVIDGS 163
Cdd:pfam00213  81 RLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKkKVKLENKVDPSLIGGVVVRVGDKVIDGS 160

                         170
                  ....*....|..
gi 1730469723 164 VRGRLERLADVL 175
Cdd:pfam00213 161 VKGKLERLKRAL 172
 
Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-177 5.84e-83

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 242.38  E-value: 5.84e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723   1 MSEFVTVARPYAKAAFDFAVEHNSVERWQDMLAFVAEVTKNEEMAELLSGALAPETLSDVFIAVCGEQLDENGQNLIRVM 80
Cdd:PRK05758    1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723  81 AENGRLKALPDVLEQFIHLRAASEATAEVEVISAAQMSDEQLAKITAAMEKRLSRKVKLNCKIDKSVMAGVIIRSGDMVI 160
Cdd:PRK05758   81 AENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVKLNEKVDPSLIGGVIIKVGDRVI 160

                         170
                  ....*....|....*..
gi 1730469723 161 DGSVRGRLERLADVLQS 177
Cdd:PRK05758  161 DGSVRGKLERLKDALKS 177
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 7-175 1.41e-76

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 226.04  E-value: 1.41e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723   7 VARPYAKAAFDFAVEHNSVERWQDMLAFVAEVTKN-EEMAELLSG-ALAPETLSDVFIAVCGEQLDENGQNLIRVMAENG 84
Cdd:TIGR01145   1 VARPYAKALFEIANEKSSLEEWGEMLNFVKEVLKNnKELKKFLSNpLISAEKKKEFIKNVFGEQLDESSLNLLLLLAENG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723  85 RLKALPDVLEQFIHLRAASEATAEVEVISAAQMSDEQLAKITAAMEKRLSR-KVKLNCKIDKSVMAGVIIRSGDMVIDGS 163
Cdd:TIGR01145  81 RLAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAaKVKLNCKVDKDLIGGVIIRIGDRVIDGS 160

                         170
                  ....*....|..
gi 1730469723 164 VRGRLERLADVL 175
Cdd:TIGR01145 161 VRGQLKRLSRQL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 6-177 1.71e-62

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 190.75  E-value: 1.71e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723   6 TVARPYAKAAFDFAVEHNSVERWQDMLAFVAE-VTKNEEMAELL-SGALAPETLSDVFIAVCGEQLDENGQNLIRVMAEN 83
Cdd:COG0712     5 TIARRYAKALFELAKEKGALDEVEEELFALAAlLAENPELRALLsSPVISAEEKKELLEALFGGKLSPETLNFLKLLVEN 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723  84 GRLKALPDVLEQFIHLRAASEATAEVEVISAAQMSDEQLAKITAAMEKRLSRKVKLNCKIDKSVMAGVIIRSGDMVIDGS 163
Cdd:COG0712    85 GRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKTGKKVELNVKVDPSLIGGVVVRVGDKVIDGS 164

                         170
                  ....*....|....
gi 1730469723 164 VRGRLERLADVLQS 177
Cdd:COG0712   165 VRGRLNRLRRALKG 178
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 7-175 9.68e-58

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 178.48  E-value: 9.68e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723   7 VARPYAKAAFDFAVEHNSVERWQDML-AFVAEVTKNEEMAELLSG-ALAPETLSDVFIAVCGEQLDENGQNLIRVMAENG 84
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELeALEAALAENPDLAAFLSNpTISAEEKKALLLELFKGLLSPLTLNFLKLLAENG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723  85 RLKALPDVLEQFIHLRAASEATAEVEVISAAQMSDEQLAKITAAMEKRLSR-KVKLNCKIDKSVMAGVIIRSGDMVIDGS 163
Cdd:pfam00213  81 RLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKkKVKLENKVDPSLIGGVVVRVGDKVIDGS 160

                         170
                  ....*....|..
gi 1730469723 164 VRGRLERLADVL 175
Cdd:pfam00213 161 VKGKLERLKRAL 172
PRK13429 PRK13429
F0F1 ATP synthase subunit delta; Provisional
 6-176 2.52e-33

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237386  Cd Length: 181  Bit Score: 116.46  E-value: 2.52e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723   6 TVARPYAKAAFDFAVEHNSVERWQDMLAFVAEVT-KNEEMAELLSG-ALAPETLSDVFIAVCG-EQLDENGQNLIRVMAE 82
Cdd:PRK13429    5 AIARRYAKALFQLAKEKGQLDSVYEELKQLAELLeDSPELRDALSNpVLSAEEKKAVLEKLLGkLKVSPEVLNFLKLLAD 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723  83 NGRLKALPDVLEQFIHLRAASEATAEVEVISAAQMSDEQLAKITAAMEKRLSRKVKLNCKIDKSVMAGVIIRSGDMVIDG 162
Cdd:PRK13429   85 RRRLGILPEIAARYLELADEQKGIVRATVTSAVPLSEAQQEAIRQKLEKMTGKKVELDTAVDPSLIGGVVVKIGDKVLDA 164

                         170
                  ....*....|....
gi 1730469723 163 SVRGRLERLADVLQ 176
Cdd:PRK13429  165 SVRTQLRRLKETLK 178
atpD CHL00119
ATP synthase CF1 delta subunit; Validated
 7-175 1.21e-20

ATP synthase CF1 delta subunit; Validated


Pssm-ID: 177042  Cd Length: 184  Bit Score: 83.88  E-value: 1.21e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723   7 VARPYAKAAFDFAVEHNSVER----WQDMLAFVAEVTkneEMAELLSGAL-APETLSDVFIAVCGEQLDENGQNLIRVMA 81
Cdd:CHL00119    8 IAQPYAEALLEFAKEKNIMEQitadIQLILTFLNESP---ELKKFLANPLiSKNAKKEVIKKTFGSQINENTLKFLMVLV 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723  82 ENGRLKALPDVLEQFIHLRAASEATAEVEVISAAQMSDEQ---LAKITAAMEKrlSRKVKLNCKIDKSVMAGVIIRSGDM 158
Cdd:CHL00119   85 DRGRIALLDAIIEKYLELVYKLASIKIAEVSTAVPLSSAQeeaLIEKLKEMTN--AKEIKLVITVDPSLIGGFLIKIGSK 162

                         170
                  ....*....|....*..
gi 1730469723 159 VIDGSVRGRLERLADVL 175
Cdd:CHL00119  163 VIDTSIKGQLKQLASHL 179
PRK13441 PRK13441
F0F1 ATP synthase subunit delta; Provisional
 4-176 2.32e-18

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184054  Cd Length: 180  Bit Score: 77.87  E-value: 2.32e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723   4 FVTVARPYAKAAFDFAVEHNSVERWQDMLAFVAEVTknEEMAELLSG-ALAPETLSDV---FIAVCGEQLDENGQNLIRV 79
Cdd:PRK13441    3 YSAIASKYARALLNVAIELEKEEEYGEFLDLVCQIY--ESAKEFFDNpIVKPEKKVSLikeIMKEFGQEMDEFFENFLNL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723  80 MAENGRLKALPDVLEQFIHLRAASEATAEVEVISAAQMSDEQLAKITAAMEKRLSRKVKLNCKIDKSVMAGVIIRSGDMV 159
Cdd:PRK13441   81 VFENKRQKLLPQIRALFEYEKILSEQKVPVNLTTAHELSDEELKLLRKFVRKYVLRDPVFEETIDESLIAGAVVEFEGKR 160

                         170
                  ....*....|....*...
gi 1730469723 160 IDGSVRGRLERLA-DVLQ 176
Cdd:PRK13441  161 LDVTVQGRLKKIArEVLK 178
PRK13430 PRK13430
F0F1 ATP synthase subunit delta; Provisional
 40-171 3.24e-14

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237387 [Multi-domain]  Cd Length: 271  Bit Score: 68.43  E-value: 3.24e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723  40 KNEEMAELLSGALAPETLSDVFIAVCgeqldengqnlirvmaeNGRLKALPDVLEQFIHLRAASEATAEVEVISAAQMSD 119
Cdd:PRK13430  151 KRELLARLLYGKVTPVTERLAEQAVG-----------------RPRGRSIEEGLDELSNLAAARRGRSVATVTTAVPLSD 213

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1730469723 120 EQLAKITAAMEKRLSRKVKLNCKIDKSVMAGVIIRSGDMVIDGSVRGRLERL 171
Cdd:PRK13430  214 EQKQRLAAALSRIYGRPVHLNSEVDPSVLGGMRVQVGDEVIDGSVAGRLERL 265
PRK13436 PRK13436
F0F1 ATP synthase subunit delta; Provisional
 11-171 3.73e-11

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184053  Cd Length: 179  Bit Score: 58.52  E-value: 3.73e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723  11 YAKAAFDFAVEHNSVERWQDMLAFVAEVTK-NEEMAELLSGALAPET-----LSDVFIAvcgeQLDENGQNLIRVMAENG 84
Cdd:PRK13436   11 YAEALFDIANEENNVEKYINEVFKIIEILKnNKDLIKLLTSYFIDKEekfkiIDKIFSA----KIDIYLVNFLKILAKNN 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723  85 RLKALPDVLEQFIHLRAASEATAEVEVISAAQMSDEQLAKITAAMEKRLSRKVKLNCKIDKSVMAGVIIRSGDMVIDGSV 164
Cdd:PRK13436   87 LFIYIKQILKKFVKLSNEKLNITYGEIYTTEPLSEVQISRFESKLSKKLNKKVHLVNKIDPKLIAGIKIKVDNKVFENSI 166


                  ....*..
gi 1730469723 165 RGRLERL 171
Cdd:PRK13436  167 KSKLKEL 173
PRK13434 PRK13434
F0F1 ATP synthase subunit delta; Provisional
 7-168 6.84e-09

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 139571  Cd Length: 184  Bit Score: 52.63  E-value: 6.84e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723   7 VARPYAKAAFDfavEHNSVERWQDMLAFVAEVTKNEEMAE--LLSGALAPETLSDVFIAVCGEQLDENGQNLIRVMAENG 84
Cdd:PRK13434    6 VSKVYASALLG---AANSPEEVEQELGDLVQLLFKDEKIRnfFLSPTVSPEEKEQTLAKNLRGKISDITLNFLGVLLNKG 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723  85 RLKALPDVLEQFIHLRAASEATAEVEVISAAQMSDEQLAKITAAMEKRLSRKVKLNCKIDKSVMAGVIIRSGDMVIDGSV 164
Cdd:PRK13434   83 RFIYLPEIQKDFTVELDKKKGRVRAQIVSYPSLEPAQVDKLGSILSEKFKSEFILEVSEDKNLLGGFVVQFNDLKIEKSI 162


                  ....
gi 1730469723 165 RGRL 168
Cdd:PRK13434  163 ASQL 166
PRK08474 PRK08474
F0F1 ATP synthase subunit delta; Validated
 7-144 2.99e-08

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 236271  Cd Length: 176  Bit Score: 50.75  E-value: 2.99e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730469723   7 VARPYAKAAFDfAVEHNSVERWQDMLAFVAEVTKNEEMAELLSGALAPETLSDVFIAVCGEQLDENGQNLIRVMAENGRL 86
Cdd:PRK08474    5 IAKRYAKALLS-SLSSDELNDIYSNLKILSSAFADEKFKEIISSPEISKEQKIEFLLSFVDNANAKFQNFIKLLAENKRL 83

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1730469723  87 KALPDVLEQFIHLRAASEATAEVEVISAAQMSDEQLAKITAAMEKRLSRKVKLNCKID 144
Cdd:PRK08474   84 ELIPAIAKELERQIALKENEYVGVVYSNEKLSEETLKKLEEKLSKKFNAKIKLKQKKS 141
PRK13428 PRK13428
F0F1 ATP synthase subunit delta; Provisional
 104-168 9.20e-05

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184048 [Multi-domain]  Cd Length: 445  Bit Score: 41.64  E-value: 9.20e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1730469723 104 EATAEVEviSAAQMSDEQLAKITAAMEKRLSRKVKLNCKIDKSVMAGVIIRSGDMVIDGSVRGRL 168
Cdd:PRK13428  374 EVVAQVS--AAAELSDAQRTRLTEVLSRIYGRPVSVQLHIDPELLGGLSIAVGDEVIDGTLSSRL 436
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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