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Conserved domains on  [gi|1730614842|gb|TYF91132|]
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type 1 fimbrial protein [Klebsiella grimontii]

Protein Classification

fimbrial protein( domain architecture ID 10007530)

fimbrial protein similar to Escherichia coli fimbrial adapter PapF, which is required for the correct presentation of the PapG adhesin at the distal end of the tip fibrillum

Gene Ontology:  GO:0009289|GO:0007155
PubMed:  1670938|22411982|2890081

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
7-184 7.17e-38

Pilin (type 1 fimbrial protein) [Cell motility];


:

Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 128.23  E-value: 7.17e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842   7 KKRLMALLVSGLLFSGHASSTSftpGQLALSGELVAAACDIDPNSRELWVDFGNISARDINSDQEGKLIRPFLVRLIGCa 86
Cdd:COG3539     2 KKLLLALLLALALSAAAAAAAD---GTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNC- 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  87 sfgsvnQSTPGAYATITFTGNASSQDPTVLIPDGEG--KGFGIQIRDRHGEILTFGEPSSGYLLSDE-NNTLKFTATLVP 163
Cdd:COG3539    78 ------DAGTSNSVKVTFTGTADSANPGLLANTGSGgaSGVGIQLLDSDGTPIPLGTPSSAVTLTSNgSATLPFYARYVA 151

                         170       180
                  ....*....|....*....|.
gi 1730614842 164 VQQHIKAGDFYAVTRFFMDYN 184
Cdd:COG3539   152 TGATVTAGSFNATATFTIDYQ 172
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
7-184 7.17e-38

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 128.23  E-value: 7.17e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842   7 KKRLMALLVSGLLFSGHASSTSftpGQLALSGELVAAACDIDPNSRELWVDFGNISARDINSDQEGKLIRPFLVRLIGCa 86
Cdd:COG3539     2 KKLLLALLLALALSAAAAAAAD---GTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNC- 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  87 sfgsvnQSTPGAYATITFTGNASSQDPTVLIPDGEG--KGFGIQIRDRHGEILTFGEPSSGYLLSDE-NNTLKFTATLVP 163
Cdd:COG3539    78 ------DAGTSNSVKVTFTGTADSANPGLLANTGSGgaSGVGIQLLDSDGTPIPLGTPSSAVTLTSNgSATLPFYARYVA 151

                         170       180
                  ....*....|....*....|.
gi 1730614842 164 VQQHIKAGDFYAVTRFFMDYN 184
Cdd:COG3539   152 TGATVTAGSFNATATFTIDYQ 172
PRK15210 PRK15210
fimbrial protein;
8-183 8.96e-14

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 66.26  E-value: 8.96e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842   8 KRLMALLVSGLLFSGHASSTSFTP-------GQLALSGELVAAACDIDPNSRELWVDFGNISARDINSDQEGKLIRPFLV 80
Cdd:PRK15210    4 KIILAMAAAGMMYGASVFAADTTPtagpfgsGKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTADATTESKPFTI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  81 RLIGCAsFGSVNQSTPGAYA-----TITFTGNASSQDpTVLIPDGEGKGFGIQ-IRDRHGEILTFGEP---SSGYLLSDE 151
Cdd:PRK15210   84 HLQNCA-FDPNIPDTAGSAGkmskvTVSFSGTANTSK-KAYTTSGSAQHVGVQlLKSDNTSIIEPNTPmpdGDAQQLQAG 161

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1730614842 152 NNTLKFTATLVPVQQHIKAGDFYAVTRFFMDY 183
Cdd:PRK15210  162 NNELNFFARLIALDNGVTPGDFNASVTYTLKY 193
Fimbrial pfam00419
Fimbrial protein;
40-184 6.67e-12

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 60.14  E-value: 6.67e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  40 LVAAACDIDPNSRELwVDFGNISARDINSDQEGKLIRPFLVRLIgCasfgsvNQSTPGAYATITFTGNASSQDPTVLIP- 118
Cdd:pfam00419   9 RVPATCKITAGTPIE-VDFGQIPVNELNAGGEGSRQKPFSITLE-C------SSGSSAVKVTVGLFGTADASSPNLLLTg 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1730614842 119 --DGEGKGFGIQIRDRHGEILTFGEPSSGYLLSD---ENNTLKFTATLV-PVQQHIKAGDFYAVTRFFMDYN 184
Cdd:pfam00419  81 ngAGAATGVGIRLYDANGGALPPNNGTSSIPVSAtaaVATGITFTASLVaTTGGTPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
7-184 7.17e-38

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 128.23  E-value: 7.17e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842   7 KKRLMALLVSGLLFSGHASSTSftpGQLALSGELVAAACDIDPNSRELWVDFGNISARDINSDQEGKLIRPFLVRLIGCa 86
Cdd:COG3539     2 KKLLLALLLALALSAAAAAAAD---GTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNC- 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  87 sfgsvnQSTPGAYATITFTGNASSQDPTVLIPDGEG--KGFGIQIRDRHGEILTFGEPSSGYLLSDE-NNTLKFTATLVP 163
Cdd:COG3539    78 ------DAGTSNSVKVTFTGTADSANPGLLANTGSGgaSGVGIQLLDSDGTPIPLGTPSSAVTLTSNgSATLPFYARYVA 151

                         170       180
                  ....*....|....*....|.
gi 1730614842 164 VQQHIKAGDFYAVTRFFMDYN 184
Cdd:COG3539   152 TGATVTAGSFNATATFTIDYQ 172
PRK15210 PRK15210
fimbrial protein;
8-183 8.96e-14

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 66.26  E-value: 8.96e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842   8 KRLMALLVSGLLFSGHASSTSFTP-------GQLALSGELVAAACDIDPNSRELWVDFGNISARDINSDQEGKLIRPFLV 80
Cdd:PRK15210    4 KIILAMAAAGMMYGASVFAADTTPtagpfgsGKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTADATTESKPFTI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  81 RLIGCAsFGSVNQSTPGAYA-----TITFTGNASSQDpTVLIPDGEGKGFGIQ-IRDRHGEILTFGEP---SSGYLLSDE 151
Cdd:PRK15210   84 HLQNCA-FDPNIPDTAGSAGkmskvTVSFSGTANTSK-KAYTTSGSAQHVGVQlLKSDNTSIIEPNTPmpdGDAQQLQAG 161

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1730614842 152 NNTLKFTATLVPVQQHIKAGDFYAVTRFFMDY 183
Cdd:PRK15210  162 NNELNFFARLIALDNGVTPGDFNASVTYTLKY 193
Fimbrial pfam00419
Fimbrial protein;
40-184 6.67e-12

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 60.14  E-value: 6.67e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  40 LVAAACDIDPNSRELwVDFGNISARDINSDQEGKLIRPFLVRLIgCasfgsvNQSTPGAYATITFTGNASSQDPTVLIP- 118
Cdd:pfam00419   9 RVPATCKITAGTPIE-VDFGQIPVNELNAGGEGSRQKPFSITLE-C------SSGSSAVKVTVGLFGTADASSPNLLLTg 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1730614842 119 --DGEGKGFGIQIRDRHGEILTFGEPSSGYLLSD---ENNTLKFTATLV-PVQQHIKAGDFYAVTRFFMDYN 184
Cdd:pfam00419  81 ngAGAATGVGIRLYDANGGALPPNNGTSSIPVSAtaaVATGITFTASLVaTTGGTPTAGDFNATATIVVDYQ 152
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
7-183 2.70e-08

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 51.11  E-value: 2.70e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842   7 KKRLMALLVSGLLFSGHAS------STSFTPGQLALSGELVAAACDIDPNSRELWVDFGNISARDINSDQEGKLIRPFLV 80
Cdd:PRK15194    2 KLRFISSAIASLLFVAGAAyaadptPVSVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFTI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  81 RLIGCasfgsvnQSTPGAYATITFTGNASSQDPTVLI-----PDGEGKGFGIQIRDRHGEIL-----TFgepSSGYLLSD 150
Cdd:PRK15194   82 QLNDC-------DPVVAATAAVAFSGQADATNDNLLAvasstNTTTATGVGIEILDNTSSILkpdgaTF---SANQNLIE 151

                         170       180       190
                  ....*....|....*....|....*....|...
gi 1730614842 151 ENNTLKFTATLVPVQQHIKAGDFYAVTRFFMDY 183
Cdd:PRK15194  152 GTNTLHFSARYKATGTSASAGQANADATFIMKY 184
PRK09733 PRK09733
fimbrial-like protein;
1-183 2.30e-07

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 48.41  E-value: 2.30e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842   1 MVKDTEKKRLMALLVSGLLFSGHASstsftpGQLALSGELVAAACDIDPNSRELWVDFGNISARDINSDQEgKLIRPFLV 80
Cdd:PRK09733    1 AFKKSLLVAGVAMILSNNVFADEGH------GIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQK-SLAEPFTI 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  81 RLIGCA-SFGSVNQSTpgayATITFTGNASSQDPTVLIPD------GEGKGFGIQIRDRHGEILTFGEPSS-GYLLSDEN 152
Cdd:PRK09733   74 HLQDCMlSQGGTTYSK----AKVTFTTANTMTGQSDLLKNtketeiGGATGVGVRILDSQSGEVTLGTPVViTFNNTNSY 149

                         170       180       190
                  ....*....|....*....|....*....|.
gi 1730614842 153 NTLKFTATLVPVQQHIKAGDFYAVTRFFMDY 183
Cdd:PRK09733  150 QELNFKARMESPSKDATPGNVYAQADYKIAY 180
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 7-184 7.30e-07

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 46.89  E-value: 7.30e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842   7 KKRLMAL----LVSGLLFSGHASStsftpGQLALSGELVAAACDIDPNSRELWVDFGNISARDINSDQEGKLIRPFLVRL 82
Cdd:PRK15209    2 KKVVFALsalaLTSTSVFAAESGD-----GTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKPFQIKL 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  83 IGCasfgsvnQSTPGAYATITFTGNASSQDPT---VLIPDGEGKGFGIQIRDRHGEILTFGEPSSGYLLSDENNTLKFTA 159
Cdd:PRK15209   77 EDC-------DITTNKKVNVSFNGVGDADDSTlvsVSTEAGAATGVGIGIYDNANTLVELNTGKSTTTLAAGQTVLYFTA 149

                         170       180
                  ....*....|....*....|....*
gi 1730614842 160 TLVPVQQHIKAGDFYAVTRFFMDYN 184
Cdd:PRK15209  150 NYVSTKDTVTTGYGNAEVDFNLSYE 174
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 12-183 3.60e-06

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 45.07  E-value: 3.60e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  12 ALLVSGLLFSG--HASSTSFTPgQLALSGELVAAACDIDPNSRELWVDFGNISARDINSDQEGKLIRPFLVRLIGCasfg 89
Cdd:PRK15190    7 ALFAMGLMLCPqiNASADDLAY-NLEFTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKNC---- 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  90 svnqSTPGAYATITFTGNASSQDPTVLIPDGEG--------KGFGIQIRDRHGEILTFGEPSS-GYLLSDENNTLKFTAT 160
Cdd:PRK15190   82 ----SRGIAGAKIWFTGEPDPDNPALLAITDTGmgsgnmlaSGVGVEILNDDQDTISINNADSvVYPLKAGRNTLSFYIR 157

                         170       180
                  ....*....|....*....|...
gi 1730614842 161 LVPVQQHIKAGDFYAVTRFFMDY 183
Cdd:PRK15190  158 YKSTRPTVTSGNATAVMYFDMQY 180
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 7-184 6.45e-06

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 44.42  E-value: 6.45e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842   7 KKRLMALLVSGLLFSG-----HASSTSFTPGQLALSGELVAAACDIDPNSRELWVDFGNISARDIN-SDQEGKLIRPFLV 80
Cdd:PRK15187    2 KKPVLALMVSAIAFGGmlstaQADTTTVTGGTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTeAGMVANQKEDFTI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  81 RLIGCASFGSVNQST----------PGAYATITFTGNASSQDPTVLIPDGEGkgfgiqirdrhgeiLTFGEPSSGYLLSD 150
Cdd:PRK15187   82 KLEDCDTQTSQNAAVifngqqdanqPGSLANTAGAGSATNVALQLYGPDGQA--------------LNIGESSSTVTLND 147

                         170       180       190
                  ....*....|....*....|....*....|....
gi 1730614842 151 ENNTLKFTATLVPVQQhIKAGDFYAVTRFFMDYN 184
Cdd:PRK15187  148 GENVIPLSVDYIATGT-ATAGNVTATATFSMVYS 180
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 24-183 6.70e-06

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 44.32  E-value: 6.70e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  24 ASSTSFTPGQLALSGELVAAACDIDPNSRELWVDFGNISARDINSDQEGKLIRPFLVRLIGCASFGSvnqstpgaYATIT 103
Cdd:PRK15191   15 ASGVQAHDGRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGSTAS--------GVTVS 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842 104 FTGNASSQDPTVL---IPDGEGKGFGIQIRDRHGEILTFGEPSSGYLLSDENNT--LKFTATLVPVQQHIKAGDFYAVTR 178
Cdd:PRK15191   87 FSGAADSRNTDLLaltAGESDASGIGIALYDQNKTLIPLGQESDVVTLSPGQASahLQFYARYLADGGAVTPGDANASAT 166


                  ....*
gi 1730614842 179 FFMDY 183
Cdd:PRK15191  167 FILAY 171
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
32-183 3.49e-05

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 42.15  E-value: 3.49e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  32 GQLALSGELVAAACDIDPNSRELWVDFGNISARDINSDQEGKLIR-PFLVRLIGCASFGSvnqSTPGayatITFTGNASS 110
Cdd:PRK15200   27 GRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPVSvPFSLRLISCSAEVW---RHVG----IAFAGVTPA 99

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1730614842 111 QDPTVLIPDGEG---KGFGIQIRD-RHGEILTFGEPSSGYLLSDENNTLKFTATLVPVQQHIKAGDFYAVTRFFMDY 183
Cdd:PRK15200  100 EDPHVFLASGEGignAGIGLALFDdQQRQIIPNTLPLHYAPILTSEMTLHFTARYRAISENMTPGRIHSEVWFTLVY 176
lpfA PRK15289
fimbrial protein; Provisional
 12-183 2.49e-03

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 37.25  E-value: 2.49e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  12 ALLVSGLLFSGHASSTSftpGQLALSGELVAAACDIDPNSRELWVDFGNISARDINSDQEGKLIRPFLVRLIGCasfgsv 91
Cdd:PRK15289    9 AFTLASLMLAGHALAED---GVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENC------ 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  92 nqstPGAY--ATITFTGN--------------ASSQDPTVLIPDGE---GKGFGIQIRDR--HGEILTFGEPSSGYLLSD 150
Cdd:PRK15289   80 ----PATYtqAAVRFDGTeapggdgdlkvgtpLTAGNPGDFTGTGQaiaATGVGIRIFNQsdNSQVKLYNDSAYTAIDAE 155

                         170       180       190
                  ....*....|....*....|....*....|...
gi 1730614842 151 ENNTLKFTATLVPVQQHIKAGDFYAVTRFFMDY 183
Cdd:PRK15289  156 GKAEMKFIARYVATNATVTAGTANADSQFTVEY 188
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 104-184 2.95e-03

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 37.00  E-value: 2.95e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842 104 FTGNASSQDPTVLIPDGEGKGFGIQIRDRHGEILTFGE----PSSGYLLSDENNT---LKFTATLVPVQQHIKAGDFYAV 176
Cdd:PRK15300   92 FEGTLDGTDATILKNEDDAENIGVQILDKTSTPMTFNDlqawSAAVALPTAEGVTelsMPFTARYIATAVPVKSGTVDAT 171


                  ....*...
gi 1730614842 177 TRFFMDYN 184
Cdd:PRK15300  172 ATFYLQYN 179
PRK15296 PRK15296
fimbrial protein SthA;
24-160 3.42e-03

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 36.61  E-value: 3.42e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730614842  24 ASSTSFTPGQLALSGELVAAACDIDPN-SRELWVDFGNISARDINSDQEGKLIRPFLVRLIGCASFGSvnqSTPgAYATI 102
Cdd:PRK15296   16 ASTPVFAQNTITFNGKIYDQACTVQVNgSTDTTIDLGNYSKERIAEKGATTDYVPFTVSLVSCPEAGT---GVP-TQAMF 91

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1730614842 103 TFTGNASSQDPTVLIPDGEGK-----GFGIQIRDRHGEILTFGEPSSGYLLSDENNTLKFTAT 160
Cdd:PRK15296   92 RFHGATDDSNPTYFKNADEGSetgaaGVGISIQNASHSDVTDNTDDAAVNLPTDGSTADFTYY 154
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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