|
Name |
Accession |
Description |
Interval |
E-value |
| HycE2 |
COG3261 |
Ni,Fe-hydrogenase III large subunit [Energy production and conversion]; |
55-537 |
0e+00 |
|
Ni,Fe-hydrogenase III large subunit [Energy production and conversion];
Pssm-ID: 442492 [Multi-domain] Cd Length: 479 Bit Score: 583.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 55 GWLSVLFGNDERKLNGHYAVYYVLSMEQGTKCWITVRVEVDANKPEYPSVTPRVPAAVWGEREVRDMYGLVPVGLPDERR 134
Cdd:COG3261 1 LALAALALLLALDLAAGGALFGLRLEAEDELLLLLLLAAGVLLLLPTPPPSSSAPAAAAARRERARERLGGEEGGGPPRR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 135 LVLPDDWPDELYPLRKDSMDYRQRPAPTTDAETYEFINELGTkknNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLF 214
Cdd:COG3261 81 RLLLPDGWPPLPPPPLRPPPPPRGPPPPPPEEPEMKVEGEGV---HEIPVGPVHAGLIEPGHFRFSVEGERILDLEIRLG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 215 YVHRGMEKLAETRmGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIVVPERAQMIRAILLEVERLHSHLLNLGLACHF 294
Cdd:COG3261 158 YVHRGIEKLAEGR-DYEQALYLAERICGICSVAHALAYCQAVEKAAGIEVPPRAQYLRVILLELERIHSHLLDLGALAND 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 295 TGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLLKEDMIQTRQLAQQMRRDVQELVDMLLSTPNMEQRTV 374
Cdd:COG3261 237 VGFETLFMQCWRLRERVLDLNEALTGNRVLRGINVPGGVRRDLDPEQLKAILERLDELEEEVKELVDLFLNDPSVLDRLV 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 375 GIGRLDPQIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMTVHSEQGCDVISRLKVRINEVYTALNMIDFGLDNLPG 454
Cdd:COG3261 317 GTGVLSKEDARDLGAVGPVARASGVDRDVRRDHPYAAYDELDFKVVTETEGDVYARALVRLEEIFESLDLIRQALEKLPE 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 455 GPLMVEGFTYIPHRFALGFSEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSC 534
Cdd:COG3261 397 GPIRVPVPGLPPDGEGLGRVEAPRGELVHYVRTDGDGRLERVKIRTPSFANWPALELALRGNIVADFPLINKSFDPCYSC 476
|
...
gi 1730651617 535 TDR 537
Cdd:COG3261 477 TDR 479
|
|
| HycE1 |
COG3262 |
Ni,Fe-hydrogenase III component G [Energy production and conversion]; |
14-534 |
1.84e-150 |
|
Ni,Fe-hydrogenase III component G [Energy production and conversion];
Pssm-ID: 442493 [Multi-domain] Cd Length: 523 Bit Score: 442.47 E-value: 1.84e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 14 LHQTFPGVVLDEAWQTKDQLTVTVKVNYLPEVVEFLYYKQGGWLSVLFGNDERKLNGHYAVYYVLSMEqGTKCWITVRVE 93
Cdd:COG3262 7 LRARFGGSILERRWVRPNEVWVEVDREDLPELAEFLAEGGGGRLAALWGNDERELGGGFAVYYVFALE-GEGALVTLKVS 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 94 VDANKPEYPSVTPRVPAAVWGEREVRDMYGLVPVGLPDERRLVLPDDWPDELYPLRKDSMDYRqRPAPTTDAETYEFINE 173
Cdd:COG3262 86 VPKDDPVFPSITDLFPAASWYEREIRDLFGIVPEGHPDPRRLVLHDDWPEGIYPLRKDFKGGP-RPAPAPAEEYFRPVEG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 174 LGTKknNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYT 253
Cdd:COG3262 165 EGIE--VVVVGPVHAGIIEPGHFFFSVGGEIVIRLEELLYYVHKGEEKLEEGEEGRAGLVLAEAAGGDSGAAAAAAAAAA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 254 TSVENAMGIVVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGI 333
Cdd:COG3262 243 AEAAAAAAIPPRAALLRLLRLLLERLELHLGLLGLGGLDAGGAGAAGAAALLRRRLERLLEALLLRRGRRGGGGGGGGGR 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 334 RRDLLKEDMIQTRQLAQQMRRDVQELVDMLLSTPNMEQRTVGIGRLDPQIARDFSNVGPMVRASGHARDTRADHPFVGYG 413
Cdd:COG3262 323 DDDDLLADLILELLLDLEEEEEELEELADLLSRLIDRLDTTGGLALKAAAAGGVGGAAGRASGGRGDRRRRAPYAAYDDV 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 414 LLPMTVHSEQGCDVISRLKVRINEVYTALNMIDFGLDNLPGGPLMVEGFTYIPHRFALGFSEAPRGDDIHWSMTGDNQKL 493
Cdd:COG3262 403 DLRVVVLTVGDVDVRRARVREELEEISRLIIILLDLLLLGPGGLLVGGEPAPAEGGGGGGGLRGGGGEGVRGGGGDAIRR 482
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 1730651617 494 YRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSC 534
Cdd:COG3262 483 RRWRRPSAANWPNPPALILPNINDDFPLNNSINSLSYGSSD 523
|
|
| NuoD |
COG0649 |
NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) [Energy production and conversion]; ... |
181-537 |
1.26e-80 |
|
NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) [Energy production and conversion]; NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440414 [Multi-domain] Cd Length: 390 Bit Score: 258.08 E-value: 1.26e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 181 VVPIGPLHvtsdeP---GHFRLFV--DGENIIDADYRLFYVHRGMEKLAETRMgYNEVTFLSDRVCGICGFAHSTAYTTS 255
Cdd:COG0649 8 VLNMGPQH-----PsthGVLRLVLelDGETVVDADPHIGYLHRGFEKLAENRT-YTQIIPYTDRLDYLSPMNNELAYVLA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 256 VENAMGIVVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRR 335
Cdd:COG0649 82 VEKLLGIEVPERAQYIRVILAELNRIASHLLWLGTYALDLGAMTPFLYAFREREKILDLFEEVTGARMTHNYFRIGGVRR 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 336 DLLKEDMIQTRQLAQQMRRDVQELVDMLLSTPNMEQRTVGIGRLDPQIARDFSNVGPMVRASGHARDTRADHPFVGYGLL 415
Cdd:COG0649 162 DLPDGFLEKVREFLDYFPKRLDEYEDLLTGNRIFKARTKGVGVLSAEDAIALGVTGPVLRASGVDYDLRKDEPYSGYDEL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 416 PMTVHSEQGCDVISRLKVRINEVYTALNMIDFGLDNLPGGPLMVEGFTYIP--------------HRFAL---GF----- 473
Cdd:COG0649 242 DFDVPVGTEGDCYDRYLVRMEEMRQSLRIIRQCLDKLPEGPVMAKDPKIAPppkeemktsmealiHHFKLvteGFkvpag 321
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1730651617 474 -----SEAPRG--------DdihwsmtGDNqKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 537
Cdd:COG0649 322 evyaaVESPRGelgfylvsD-------GGT-KPYRVKIRSPSFANLQALPEMLKGHMLADVVAILGSLDIVLGEVDR 390
|
|
| PRK06075 |
PRK06075 |
NADH-quinone oxidoreductase subunit D; |
175-537 |
2.74e-68 |
|
NADH-quinone oxidoreductase subunit D;
Pssm-ID: 180385 [Multi-domain] Cd Length: 392 Bit Score: 225.81 E-value: 2.74e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 175 GTKKNNVVPIGPLHVTSDepGHFRLFV--DGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLsDRVCGICGFAHSTAY 252
Cdd:PRK06075 2 AEIRNYTLNFGPQHPAAH--GVLRLILelDGEVVVRADPHIGYLHRGTEKLAEYRTYLQAIPYF-DRLDYVSPMNNEHAY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 253 TTSVENAMGIVVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGG 332
Cdd:PRK06075 79 CLAVEKLLGIEVPERAQYIRVLFLELNRILSHLLWLGTHALDLGAMTVFLWGFREREKLLDLYEAVTGARMHHAYIRPGG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 333 IRRDlLKEDMIQ-TRQLAQQMRRDVQELVDMLLSTPNMEQRTVGIGRLDPQIARDFSNVGPMVRASGHARDTRADHPFVG 411
Cdd:PRK06075 159 VRRD-LPDGLLEdIRDFLDYFPKRLDDYETLLTDNRIWKQRLVGVGVVSKERALALGFTGPMLRASGVAWDLRKSQPYEV 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 412 YGLLPMTVHSEQGCDVISRLKVRINEVYTALNMIDFGLDNL--PGGPLMVEGFTYIP--------------HRFAL---G 472
Cdd:PRK06075 238 YDELDFDVPVGKNGDCYDRYLVRVEEMRQSLRIIEQCLDRLrpPPGPVMVDDPKIAPparlemktsmealiHHFKLvteG 317
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1730651617 473 F----------SEAPRGD-DIHWSMTGDNqKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 537
Cdd:PRK06075 318 FrvpagevyaaVESPKGEfGVYLVSDGGN-KPYRVKIRAPSFAHLQALDEMCRGHMLADVVAIIGSLDIVFGEVDR 392
|
|
| NuoD |
TIGR01962 |
NADH dehydrogenase I, D subunit; This model recognizes specificially the D subunit of NADH ... |
178-537 |
3.58e-64 |
|
NADH dehydrogenase I, D subunit; This model recognizes specificially the D subunit of NADH dehydrogenase I complex. It excludes the related chain of NAD(P)H-quinone oxidoreductases from chloroplast and Synechocystis, where the quinone may be plastoquinone rather than ubiquinone. This subunit often appears as a C/D fusion. [Energy metabolism, Electron transport]
Pssm-ID: 273898 Cd Length: 386 Bit Score: 214.90 E-value: 3.58e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 178 KNNVVPIGPLHVTSDepGHFRLFV--DGENIIDADYRLFYVHRGMEKLAEtRMGYNEVTFLSDRVCGICGFAHSTAYTTS 255
Cdd:TIGR01962 1 EFMILNLGPQHPSTH--GVLRLILelDGEYVVRADPHIGYLHRGTEKLAE-NRTYQQYIPYTDRLDYLSPFSNELAYCLA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 256 VENAMGIVVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRR 335
Cdd:TIGR01962 78 VEKLLGIEVPRRAQVIRVMLSELNRISSHLLFIGTHALDLGAMTPFLYAFREREKILDLFEAITGARMHSAYFRIGGVAL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 336 DLLKEDMIQTRQLAQQMRRDVQELVDMLLSTPNMEQRTVGIGRLDPQIARDFSNVGPMVRASGHARDTRADHPFVGYGLL 415
Cdd:TIGR01962 158 DLPENWLEEIREFLEQFPKRLRDYETLLNENRIWKQRTQGVGVVSAKDALDWGLTGPMLRGSGIDWDIRKSEPYEGYDEY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 416 PMTVHSEQGCDVISRLKVRINEVYTALNMIDFGLDNLPGGPLMVEGFTYIP--------------HRFAL---GFS---- 474
Cdd:TIGR01962 238 DFDVPVGGNGDCYDRYLLRVLEMRESIKIIEQCLEKMPPGPIKADNPKLAPppkermltsmealiHHFKLvteGFRvpag 317
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1730651617 475 ------EAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 537
Cdd:TIGR01962 318 evyvpiESPKGELGFYIISDGGTKPYRLKIRAPSFAHLQALEAMCVGHYLADLIAILGSIDPVMGEVDR 386
|
|
| PRK13292 |
PRK13292 |
NADH-quinone oxidoreductase subunit B/C/D; |
11-537 |
2.26e-62 |
|
NADH-quinone oxidoreductase subunit B/C/D;
Pssm-ID: 183955 [Multi-domain] Cd Length: 788 Bit Score: 219.26 E-value: 2.26e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 11 LAVLHQTFPG-VVLDEAwqTKDQLTVTVKVNYLPEVVEFLYYKQGG---WLSVLFGNDE--RKLNGHY----AVYYVLSM 80
Cdd:PRK13292 225 AGELEGAFGDdVRLDEG--ATDMLTYRCPPELVPEVLRHLKKRASSpfrRLEDLAAVDEscRRDREKFpdftVNYHLLSF 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 81 EQGTKcwITVRVEVDANKPEYPSVTPRVPAAVWGEREVRDMYGLVPVGLPDERRLVLPDDWpdELYPLRKDSmDYR--QR 158
Cdd:PRK13292 303 DTPGH--VRIKTELRGRTPELPSATGVFPAANWYEREAFDMFGIRFAGHPNLRRILMPPDW--EGHPLRKEH-PFRatEM 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 159 PAPTTD-------AETYEFINELGtKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHRGMEKLAEtRMGYN 231
Cdd:PRK13292 378 PPYTRDdarrlqpLPAGDFFDRVD-EETLILNLGPQHPGTHGIIRFVLKLDGEEIVDMDSDIGYHHRGAEKIGE-RQHWN 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 232 EVTFLSDRVCGICGFAHSTAYTTSVENAMGIVVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETS 311
Cdd:PRK13292 456 QFIPYTDRIDYLAGVQNNLAYVNSVETLCGIEVPDRAIYIRVMLSELFRIANHLVWLGTFAADVGAMTPVFYTFTDREKI 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 312 MKMAEILTGARKTYGLNLIGGIRRDLLKEDMIQTRQLAQQMRRDVQELVDMLLSTPNMEQRTVGIGRLDPQIARDFSNVG 391
Cdd:PRK13292 536 FDIVEMITGGRMHPAWFRIGGVAEDLPEGWKEAVEAFLRWFPGRLKEYEDLLTGNPIFKARLKGVGVITRDEAVEWGISG 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 392 PMVRASGHARDTRADHPFVGYGLLPMTVHSEQGCDVISRLKVRINEVYTALNMIDFGLDNLPGGPLMVEGFTY-IP---- 466
Cdd:PRK13292 616 PNLRACGLAWDLRKKMPYGGYDRFDFEVPTAEGGDCYARYLVRMEEMRQSLRIVRQAAAGMPGGRWISDDYRYvLPqkrd 695
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 467 ---------HRF-------------ALGFSEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLI 524
Cdd:PRK13292 696 tlkdiesliHHFvnvtrgpappkgeCYAAIEAPKGENGYFVVSDGLNIAYRMRIRTPSFPHIQALPLLSRGWLVADFLAI 775
|
570
....*....|...
gi 1730651617 525 IGSLDPCYSCTDR 537
Cdd:PRK13292 776 IGSIDFVLADLDR 788
|
|
| PRK11742 |
PRK11742 |
bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional |
11-537 |
4.48e-53 |
|
bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional
Pssm-ID: 236965 [Multi-domain] Cd Length: 575 Bit Score: 190.13 E-value: 4.48e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 11 LAVLHQTFPGVVLDEAWQTKDQLTVTVKVNYLPEVVEFLYYKQGGW--LSVLFGNDERkLNGHYA---------VYYVLS 79
Cdd:PRK11742 2 IGELRNRFGPDAFTVQATRTGIPVVWVKREQLLEVLRFLRKLPKPYvmLFDLHGIDER-LRTHREglpaadftvFYHLIS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 80 MEQGTKcwITVRVEVDANKPEYPSVTPRVPAAVWGEREVRDMYGLVPVGLPDERRLVLPDDWpdELYPLRKDsmdyrqRP 159
Cdd:PRK11742 81 IERNRD--IMLKVALSENDLHVPTITKIFPNANWYERETWDMFGITFDGHPHLRRILMPPTW--EGHPLRKD------YP 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 160 APTTDAETYEFIN---------------ELGTKKNN------VVPIGPLHVTSDepGHFR--LFVDGENIIDADYRLFYV 216
Cdd:PRK11742 151 ARATEFDPFELTKakqdlemealrfkpeEWGMKRGTdnedfmFLNLGPNHPSAH--GAFRivLQLDGEEIVDCVPDIGYH 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 217 HRGMEKLAEtRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIVVPERAQMIRAILLEVERLHSHLLNLGLACHFTG 296
Cdd:PRK11742 229 HRGAEKMGE-RQSWHSYIPYTDRIDYLGGCMNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIGTFIQDVG 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 297 FDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLLK--EDMIqtRQLAQQMRRDVQELVDMLLSTPNMEQRTV 374
Cdd:PRK11742 308 AMTPVFFAFTDRQKIYDVIEAITGFRMHPAWFRIGGVAHDLPRgwDRLL--REFLDWMPKRLDEYEKAALRNSILKGRTQ 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 375 GIGRLDPQIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMTVHSEQGCDVISRLKVRINEVYTALNMIDFGLDNLPG 454
Cdd:PRK11742 386 GVAAYNAKEALEWGVTGAGLRATGIDFDVRKARPYSGYENFDFEVPVGGNGDCYDRVMVKVEEMRQSLRIIEQCLDNMPE 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 455 GP---------------------------LMVEGFTYIPHRFALGFSEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWP 507
Cdd:PRK11742 466 GPfkadhplttpppkertlqhietlithfLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSFAHLQ 545
|
570 580 590
....*....|....*....|....*....|
gi 1730651617 508 TLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 537
Cdd:PRK11742 546 QIPSVIRGSLVSDLIVYLGSIDFVMSDVDR 575
|
|
| PRK12322 |
PRK12322 |
NADH-quinone oxidoreductase subunit D; |
184-530 |
1.36e-50 |
|
NADH-quinone oxidoreductase subunit D;
Pssm-ID: 183437 [Multi-domain] Cd Length: 366 Bit Score: 177.97 E-value: 1.36e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 184 IGPLHVTSDepGHFRLFV--DGENIIDADYRLFYVHRGMEKLAETRMgYNEVTFLSDRVCGICGFAHSTAYTTSVENAMG 261
Cdd:PRK12322 11 VGPQHPSTH--GVFRLVLkiDGEIIVEATPVIGYLHRGTEKLAESLQ-YTQIIPYTDRMDYLSAMTNNYVYCHAVETMMG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 262 IVVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLLKED 341
Cdd:PRK12322 88 LEVPERAEYLRVIAMELGRIASHLVWWGTYLLDIGAVSPFLYAFREREMIINLLNELCGARLTFNYMRIGGVKWDAPDGW 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 342 MIQTRQLAQQMRRDVQELVDMLLSTPNMEQRTVGIGRLDPQIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMTVHS 421
Cdd:PRK12322 168 IEKVKEFVPYMREQLAGYHDLVTGNEIFLNRVKGVGIYSAEEAISYSLSGVNLRCTGVNWDLRKDEPYSIYDRFDFDIPV 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 422 EQGCDVISRLKVRINEVYTALNMIDFGLDNLP-GGPLMVE---------GFTYipHRFalgfsEAPRGDDIHWSMTGDNQ 491
Cdd:PRK12322 248 GSVGDCWDRYVCRMQEIEQSLKIIEQAVEQFPkEGPVLAKvpkiikapkGEAY--VRI-----ESPRGEIGCYIASDGKK 320
|
330 340 350
....*....|....*....|....*....|....*....
gi 1730651617 492 KLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDP 530
Cdd:PRK12322 321 KPYRLKFRRPSFYNLQILPKLLKGENIANLIAILGSIDI 359
|
|
| Complex1_49kDa |
pfam00346 |
Respiratory-chain NADH dehydrogenase, 49 Kd subunit; |
295-537 |
9.01e-45 |
|
Respiratory-chain NADH dehydrogenase, 49 Kd subunit;
Pssm-ID: 459772 Cd Length: 270 Bit Score: 159.47 E-value: 9.01e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 295 TGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLLKEDMIQTRQLAQQMRRDVQELVDMLLSTPNMEQRTV 374
Cdd:pfam00346 1 LGAMTPFLYAFREREKILDLFERITGARMTHSYFRPGGVARDLPEGFLEKIREFLDYFPKRLDEYEDLLTRNRIFKDRTK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 375 GIGRLDPQIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMTVHSEQGCDVISRLKVRINEVYTALNMIDFGLDNLPG 454
Cdd:pfam00346 81 GVGVLSAEDALALGVTGPMLRASGVPWDLRKDEPYSGYDELDFDVPVGTEGDCYDRYLVRMEEMRQSLRIIRQCLDKLPE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 455 GPLMVEGFTYIP--------------HRFAL---GFS----------EAPRGDDIHWSMTGDNQKLYRWRCRAATYANWP 507
Cdd:pfam00346 161 GPVMADDPKIALppkeemktsmealiHHFKLvteGFRvpagevyvavEAPKGELGFYLVSDGGTKPYRVKIRAPSFANLQ 240
|
250 260 270
....*....|....*....|....*....|
gi 1730651617 508 TLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 537
Cdd:pfam00346 241 ALPEMCKGHMLADVVAIIGSIDIVMGEVDR 270
|
|
| PRK07415 |
PRK07415 |
NAD(P)H-quinone oxidoreductase subunit H; Validated |
181-537 |
6.14e-38 |
|
NAD(P)H-quinone oxidoreductase subunit H; Validated
Pssm-ID: 180969 [Multi-domain] Cd Length: 394 Bit Score: 144.11 E-value: 6.14e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 181 VVPIGPLHVTSDepGHFRLFV--DGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSdRVCGICGFAHSTAYTTSVEN 258
Cdd:PRK07415 12 VLNFGPHHPSMH--GVLRLIVtlDGEDVVDCEPVIGYLHRGMEKIAENRTNVMYVPYVS-RWDYAAGMFNEAITVNAPEK 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 259 AMGIVVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARkTYGLNL--IGGIRRD 336
Cdd:PRK07415 89 LANIPVPKRASYIRVIMLELNRIANHLLWLGPFLADVGAQTPFFYIFREREMIYDLWEAATGQR-LINNNYfrIGGVAAD 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 337 LLKEDMIQTRQLAQQMRRDVQELVDMLLSTPNMEQRTVGIGRLDPQIARDFSNVGPMVRASGHARDTR-ADHpFVGYGLL 415
Cdd:PRK07415 168 LPYGWLEKCLDFCDYFGPKIDEYEKLITNNPIFRRRIEGLGTISREEAINWGLSGPMLRASGVKWDLRkVDH-YECYDDF 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 416 PMTVHSEQGCDVISRLKVRINEVYTALNMIDFGLDNLPGGPL-------MVEG---------FTYIPHRFALGF------ 473
Cdd:PRK07415 247 DWDVAWETEGDCLARYRVRIEEMRESVKIIRQACKGIPGGPYenleakrMAEGkksewngfdYQYVAKKVAPTFkipnge 326
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1730651617 474 ----SEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 537
Cdd:PRK07415 327 lyvrLESGKGELGIFIQGNNDVTPWRWKIRAADFNNLQILPHLLKGAKVADIMAILGSIDVIMGSVDR 394
|
|
| Complex1_30kDa |
pfam00329 |
Respiratory-chain NADH dehydrogenase, 30 Kd subunit; |
35-151 |
4.15e-33 |
|
Respiratory-chain NADH dehydrogenase, 30 Kd subunit;
Pssm-ID: 459763 [Multi-domain] Cd Length: 121 Bit Score: 122.59 E-value: 4.15e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 35 VTVKVNYLPEVVEFLYYKQGG--WLSVLFGNDERKlNGHYAVYYVLSMeqgTKCWITVRVEV-DANKPEYPSVTPRVPAA 111
Cdd:pfam00329 1 VTVDPEDLLEVARFLRDDELGfdHLSDLTGVDYPE-EGRFEVVYHLLS---ITHNVRVRVKVpLEDDPVVPSVTDIWPGA 76
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1730651617 112 VWGEREVRDMYGLVPVGLPDERRLVLPDDWpdELYPLRKD 151
Cdd:pfam00329 77 NWYEREVYDMFGIVFEGHPDLRRILLPEDW--EGHPLRKD 114
|
|
| ndhH |
CHL00017 |
NADH dehydrogenase subunit 7 |
171-529 |
2.99e-29 |
|
NADH dehydrogenase subunit 7
Pssm-ID: 176960 Cd Length: 393 Bit Score: 119.42 E-value: 2.99e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 171 INELGTKKNN-VVPIGPLHVTSDepGHFRLFV--DGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLS--DRVcgicg 245
Cdd:CHL00017 1 MTVPATRKDLmIVNMGPHHPSMH--GVLRLIVtlDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTrwDYL----- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 246 fahSTAYTTSV-----ENAMGIVVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTG 320
Cdd:CHL00017 74 ---ATMFTEAItvnapEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 321 ARKTYGLNLIGGIRRDLLKEDMIQTRQLAQQMRRDVQELVDMLLSTPNMEQRTVGIGRLDPQIARDFSNVGPMVRASGHA 400
Cdd:CHL00017 151 MRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLERVEGVGIIGGEEAINWGLSGPMLRASGIQ 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 401 RDTRADHPFVGYGLLPMTVHSEQGCDVISRLKVRINEVYTALNMIDFGLDNLPGGPL------------MVE--GFTY-- 464
Cdd:CHL00017 231 WDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESIKIIQQALEGIPGGPYenlearrfdrekDSEwnDFEYrf 310
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1730651617 465 ----------IPHRFALGFSEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLD 529
Cdd:CHL00017 311 iskkpsptfeLSKQELYVRVEAPKGELGIFLIGDDSVFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSID 385
|
|
| NuoC |
COG0852 |
NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) [Energy production and conversion]; ... |
1-151 |
3.85e-28 |
|
NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) [Energy production and conversion]; NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440613 [Multi-domain] Cd Length: 164 Bit Score: 110.31 E-value: 3.85e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 1 MSEEkigQHYLAVLHQTFPGVVLdEAWQTKDQLTVTVKVNYLPEVVEFLYYKQG-GWLSVLFGNDERKLNGHYAVYYVL- 78
Cdd:COG0852 1 MSEL---EELLEALEEKFGDAVL-EVEEARGELTLTVPPEDLVDVARFLRDDLGfDHLSDLTGVDYPERGDRFEVVYHLl 76
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1730651617 79 SMEQGTKcwITVRVEVDANKPEYPSVTPRVPAAVWGEREVRDMYGLVPVGLPDERRLVLPDDWpdELYPLRKD 151
Cdd:COG0852 77 SLTHNRR--LRLKVFVPRDDPVVPSVTDVWPGANWHEREAYDMFGIVFEGHPDLRRILLPEDW--EGHPLRKD 145
|
|
| PRK06074 |
PRK06074 |
NADH dehydrogenase subunit C; Provisional |
1-151 |
3.94e-21 |
|
NADH dehydrogenase subunit C; Provisional
Pssm-ID: 235691 [Multi-domain] Cd Length: 189 Bit Score: 91.12 E-value: 3.94e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 1 MSEEKIGQHylavLHQTFPGVVLDEAwQTKDQLTVTVKVNYLPEVVEFLyyKQGGW-----LSVLFGNDERKLNGHYA-V 74
Cdd:PRK06074 2 EKLEELVAK----LLEKLPDAIGKVT-VAFGELTLKVPAEKILEVLTFL--RDDPElrfeqLIDLTGVDYPERGKRFEvV 74
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1730651617 75 YYVLSMEQGTKcwITVRVEVDaNKPEYPSVTPRVPAAVWGEREVRDMYGLVPVGLPDERRLVLPDDWpdELYPLRKD 151
Cdd:PRK06074 75 YHLLSYKHNVR--LRVKVRAP-EDPVVPSVVDIWPSANWYEREAYDLYGIVFEGHPDLRRILTDYGF--EGHPLRKD 146
|
|
| NuoC_fam |
TIGR01961 |
NADH (or F420H2) dehydrogenase, subunit C; This model describes the C subunit of the NADH ... |
33-151 |
5.18e-18 |
|
NADH (or F420H2) dehydrogenase, subunit C; This model describes the C subunit of the NADH dehydrogenase complex I in bacteria, as well as many instances of the corresponding mitochondrial subunit (NADH dehydrogenase subunit 9) and of the F420H2 dehydrogenase in Methanosarcina. Complex I contains subunits designated A-N. This C subunit often occurs as a fusion protein with the D subunit. This model excludes the NAD(P)H and plastoquinone-dependent form of chloroplasts and [Energy metabolism, Electron transport]
Pssm-ID: 273897 [Multi-domain] Cd Length: 121 Bit Score: 79.97 E-value: 5.18e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 33 LTVTVKVNYLPEVVEFLYYKQGGW--LSVLFGNDERKLNGHYAVYYVLSMEQGTKcwITVRVEVDANKPeYPSVTPRVPA 110
Cdd:TIGR01961 1 LVVWIKKEQLLEVLTFLKDPALGFelLTDVSGVDYPKEKRFEVVYHLLSIKKNRR--IRLKVRLSEDDP-VPSLTSVFPT 77
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1730651617 111 AVWGEREVRDMYGLVPVGLPDERRLVLPDDWpdELYPLRKD 151
Cdd:TIGR01961 78 ANWYERETYDMYGIVFDGHPDLRRILMPDDF--EGHPLRKD 116
|
|
| PRK07735 |
PRK07735 |
NADH-quinone oxidoreductase subunit C; |
8-155 |
2.03e-16 |
|
NADH-quinone oxidoreductase subunit C;
Pssm-ID: 236081 [Multi-domain] Cd Length: 430 Bit Score: 81.57 E-value: 2.03e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 8 QHYLAVLHQTFPGVVLDEAW---QTKDQLTVTVKVNYLPEVVEFLYYKQG---GWLSVLFGNDerkLNGHYAVYYVLsME 81
Cdd:PRK07735 279 NKYVEVIKEKLGEDVLEDSYinkLSKDVPTLVVEPEKYYEVAELLRFHEQlafDYLSELHGTD---FVTHMEVYVHL-YS 354
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1730651617 82 QGTKCWITVRVEVDANKPEYPSVTPRVPAAVWGEREVRDMYGLVPVGLPDERRLVLPDDWPDelYPLRKDSMDY 155
Cdd:PRK07735 355 YGKRQSVAVKVKLDREAPQVESVTPLWKGANWPEREAYDLLGIVFKGHPNLSRILLPDDWVG--HPLRKDYEPY 426
|
|
| FrhA |
COG3259 |
Coenzyme F420-reducing hydrogenase, alpha subunit [Energy production and conversion]; |
195-375 |
2.08e-14 |
|
Coenzyme F420-reducing hydrogenase, alpha subunit [Energy production and conversion];
Pssm-ID: 442490 Cd Length: 458 Bit Score: 75.57 E-value: 2.08e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 195 GHFRLFV---DGENIIDAdyrlfYVH----RGMEKLAETRMgYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIVVPER 267
Cdd:COG3259 15 GHGKITIfldDDGKVKDA-----RLHivepRGFEKFLEGRP-YEEVPDITARICGICPVAHHLASAKALEAAFGVEPPPT 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 268 AQMIRAILLEVERLHSHLLNLGL--ACHFTGFDSGF----------MQFFRVRETSMKMAEILTGaRKTYGLNLI-GGIR 334
Cdd:COG3259 89 ARKLRRLLYCGEWIQSHALHFFFlaAPDFLGYRNVLglakkhpelvKRGLRLRKLGNEIIELLGG-RAIHPVNAVpGGFS 167
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1730651617 335 RDLLKEDMIQTRQLAQQMRRDVQELVDML--LSTPNMEQRTVG 375
Cdd:COG3259 168 KAPSEEERDELLERLEEALEFAEEAVDLFkdLFLKNKDEVDFP 210
|
|
| HyaB |
COG0374 |
Ni,Fe-hydrogenase I large subunit [Energy production and conversion]; |
239-294 |
3.80e-11 |
|
Ni,Fe-hydrogenase I large subunit [Energy production and conversion];
Pssm-ID: 440143 Cd Length: 539 Bit Score: 65.63 E-value: 3.80e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1730651617 239 RVCGICGFAHSTAYTTSVENAMGIVVPERAQMIRAILLEVERLHSHLLnlglacHF 294
Cdd:COG0374 55 RICGVCTTSHALASVRALEDALGIEPPPNARLIRNLILAAENLHDHLV------HF 104
|
|
| PRK07785 |
PRK07785 |
NADH dehydrogenase subunit C; Provisional |
21-151 |
5.84e-11 |
|
NADH dehydrogenase subunit C; Provisional
Pssm-ID: 181115 [Multi-domain] Cd Length: 235 Bit Score: 62.70 E-value: 5.84e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 21 VVLDeawqtKDQLTVTVKVNYLPEVVEFLYYKQG-------GWLSVLFGNDE-RKLnghYAVYYVLSMEQGTKcwITVRV 92
Cdd:PRK07785 84 VVVD-----RGELTLHVRREHLVEVAQTLRDDPAlrfelclGVSGVHYPHDTgREL---HAVYHLTSITHNRR--IRLEV 153
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1730651617 93 EVDANKPEYPSVTPRVPAAVWGEREVRDMYGLVPVGLPDERRLVLPDDWPDelYPLRKD 151
Cdd:PRK07785 154 AVPDADPHIPSLVSVYPTNDWHERETYDFFGIVFDGHPALTRIEMPDDWVG--HPQRKD 210
|
|
| PRK12494 |
PRK12494 |
NAD(P)H-quinone oxidoreductase subunit J; |
35-151 |
2.29e-10 |
|
NAD(P)H-quinone oxidoreductase subunit J;
Pssm-ID: 183557 [Multi-domain] Cd Length: 172 Bit Score: 59.58 E-value: 2.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 35 VTVKVNYLPEVVEFLYYKQGGWLSVLFGNDERKLNGHYAVYYVLSMEQGTKCWITVRVEV--DANKPEYPSVTPRVPAAV 112
Cdd:PRK12494 43 IKVEPDFLLPIATALYAYGFNYLQCQGGYDEGPGKELVSFYHLIKVSDNADKPREVRLKVflPRDDPRVPSVYWIWKGAD 122
|
90 100 110
....*....|....*....|....*....|....*....
gi 1730651617 113 WGEREVRDMYGLVPVGLPDERRLVLPDDWPDelYPLRKD 151
Cdd:PRK12494 123 WQERETYDMYGINFEGHPNLKRILMPEDWVG--WPLRKD 159
|
|
| NiFeSe_Hases |
pfam00374 |
Nickel-dependent hydrogenase; |
239-294 |
8.98e-10 |
|
Nickel-dependent hydrogenase;
Pssm-ID: 459789 Cd Length: 495 Bit Score: 60.96 E-value: 8.98e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1730651617 239 RVCGICGFAHSTAYTTSVENAMGIVVPERAQMIRAILLEVERLHSHLLnlglacHF 294
Cdd:pfam00374 21 RICGVCTTVHALASVRAVEDALGIKIPLNAQLIRNLIQGALFVHDHIV------HF 70
|
|
| PRK08491 |
PRK08491 |
NADH-quinone oxidoreductase subunit C; |
25-150 |
9.84e-10 |
|
NADH-quinone oxidoreductase subunit C;
Pssm-ID: 181449 Cd Length: 263 Bit Score: 59.69 E-value: 9.84e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 25 EAWQTKDQLTVTVKVNYLPEVVEFLyyKQGGW--LSVLFGNDERKLNGHYAVYY-VLSMEQGTKCWITVRVEVdanKPEY 101
Cdd:PRK08491 51 ESYIELDQAVIWIKKDDNFKVLKIL--KHLGYecLSEMSAIDFLAKKGGFEVFYqLLSMSKRKRVRVKCFLKE---KEAL 125
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1730651617 102 PSVTPRVPAAVWGEREVRDMYGLVPVGLPDERRLVLPDDWPDelYPLRK 150
Cdd:PRK08491 126 QSVSFLFKSANWSEREMYDMFGIVINNHPYLKRILMPDDWVG--HPLLK 172
|
|
| PRK10170 |
PRK10170 |
Ni/Fe-hydrogenase large subunit; |
195-288 |
8.04e-09 |
|
Ni/Fe-hydrogenase large subunit;
Pssm-ID: 182281 Cd Length: 597 Bit Score: 58.50 E-value: 8.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730651617 195 GHFR--LFVDGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLsDRVCGICGFAHSTAYTTSVENAMGIVVPERAQMIR 272
Cdd:PRK10170 29 GHMRceVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDAWAFV-ERICGVCTGVHALASVYAIEDAIGIKVPDNANIIR 107
|
90
....*....|....*.
gi 1730651617 273 AILLEVERLHSHLLNL 288
Cdd:PRK10170 108 NIMLATLWCHDHLVHF 123
|
|
| PRK10467 |
PRK10467 |
hydrogenase 2 large subunit; Provisional |
218-286 |
1.66e-06 |
|
hydrogenase 2 large subunit; Provisional
Pssm-ID: 182482 Cd Length: 567 Bit Score: 50.93 E-value: 1.66e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1730651617 218 RGMEKLAETRmGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIVVPERAQMIRAILLEVERLHSHLL 286
Cdd:PRK10467 39 RGMEEIVKNR-DPRDAWMIVQRICGVCTTTHAISSVRAAESALNIDVPVNAQYIRNIILAAHTTHDHIV 106
|
|
| ndhJ |
CHL00012 |
NADH dehydrogenase subunit J |
91-151 |
2.53e-05 |
|
NADH dehydrogenase subunit J
Pssm-ID: 176955 [Multi-domain] Cd Length: 158 Bit Score: 44.69 E-value: 2.53e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1730651617 91 RVEVDANKPE-------YPSVTPRVPAAVW-------GEREVRDMYGLVPVGLPDERRLVLPDDWPDelYPLRKD 151
Cdd:CHL00012 73 RIQYGVDQPEevcikvfVPRKNPRIPSVFWvwksadfQERESYDMLGISYDNHPRLKRILMPESWIG--WPLRKD 145
|
|
| |
