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Conserved domains on  [gi|2126543622|gb|UDV06345|]
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FtsQ-type POTRA domain-containing protein [Staphylococcus pseudintermedius]

Protein Classification

cell division protein FtsQ/DivIB( domain architecture ID 11446343)

cell division protein FtsQ/DivIB may be involved in stabilizing or promoting the assembly of the division complex

CATH:  3.40.50.10960
Gene Ontology:  GO:0051301|GO:0043093
SCOP:  4004200

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FtsQ COG1589
Cell division septal protein FtsQ [Cell cycle control, cell division, chromosome partitioning]; ...
 45-245 1.00e-32

Cell division septal protein FtsQ [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 441197 [Multi-domain]  Cd Length: 241  Bit Score: 120.52  E-value: 1.00e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2126543622  45 YMFTPISHIKSADIKGNHYVSKQDILKELDIQNHPRIYAYSSDDAETRLKQNELIDEVTIEKGLFNPIEVNVKEHTIIAI 124
Cdd:COG1589    34 LLFSPLFPVREVEVEGNSHVSAEEIRAALGILLGGNLFTLDLDAIRERLEALPWVKSASVRRRWPDTLVIEVTEREPVAR 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2126543622 125 TTEKSRVVPMIENGKVLKDYKQEVPNEAPYIEGFKGAEKR--NLIDALQKMDRtTRAQISEIvsapQKDQPHLIKLFMRD 202
Cdd:COG1589   114 WNTGGGYYLVDADGVVFEAVSAEPPADLPLLTGPDGSEKAvlALLELLAALPE-LRLQISEI----SLSSRGRWTLTLDD 188

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 2126543622 203 GIEVV-GNTNTIAEKLKYYPSMSQALEKDetgklKKSGFIDLSV 245
Cdd:COG1589   189 GVEVRlGRSEDLAEKLARLAALLPQLLAG-----KGIAYIDLRY 227
 
Name Accession Description Interval E-value
FtsQ COG1589
Cell division septal protein FtsQ [Cell cycle control, cell division, chromosome partitioning]; ...
 45-245 1.00e-32

Cell division septal protein FtsQ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 441197 [Multi-domain]  Cd Length: 241  Bit Score: 120.52  E-value: 1.00e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2126543622  45 YMFTPISHIKSADIKGNHYVSKQDILKELDIQNHPRIYAYSSDDAETRLKQNELIDEVTIEKGLFNPIEVNVKEHTIIAI 124
Cdd:COG1589    34 LLFSPLFPVREVEVEGNSHVSAEEIRAALGILLGGNLFTLDLDAIRERLEALPWVKSASVRRRWPDTLVIEVTEREPVAR 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2126543622 125 TTEKSRVVPMIENGKVLKDYKQEVPNEAPYIEGFKGAEKR--NLIDALQKMDRtTRAQISEIvsapQKDQPHLIKLFMRD 202
Cdd:COG1589   114 WNTGGGYYLVDADGVVFEAVSAEPPADLPLLTGPDGSEKAvlALLELLAALPE-LRLQISEI----SLSSRGRWTLTLDD 188

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 2126543622 203 GIEVV-GNTNTIAEKLKYYPSMSQALEKDetgklKKSGFIDLSV 245
Cdd:COG1589   189 GVEVRlGRSEDLAEKLARLAALLPQLLAG-----KGIAYIDLRY 227
POTRA_1 pfam08478
POTRA domain, FtsQ-type; FtsQ/DivIB bacterial division proteins (pfam03799) contain an ...
 49-119 8.43e-10

POTRA domain, FtsQ-type; FtsQ/DivIB bacterial division proteins (pfam03799) contain an N-terminal POTRA domain (for polypeptide-transport-associated domain). This is found in different types of proteins, usually associated with a transmembrane beta-barrel. FtsQ/DivIB may have chaperone-like roles, which has also been postulated for the POTRA domain in other contexts.


Pssm-ID: 430019 [Multi-domain]  Cd Length: 69  Bit Score: 54.11  E-value: 8.43e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2126543622  49 PISHIKsadIKGNHYVSKQDILKELDIQNHPRIYAYSSDDAETRLKQNELIDEVTIEKGLFNPIEVNVKEH 119
Cdd:pfam08478   2 PIRQVE---VSGNKHLSTEEIRKALGIQLGTSFFSLDLNAIEDRLEKLPWVKSATVRRQWPNTLRITVTER 69
 
Name Accession Description Interval E-value
FtsQ COG1589
Cell division septal protein FtsQ [Cell cycle control, cell division, chromosome partitioning]; ...
 45-245 1.00e-32

Cell division septal protein FtsQ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 441197 [Multi-domain]  Cd Length: 241  Bit Score: 120.52  E-value: 1.00e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2126543622  45 YMFTPISHIKSADIKGNHYVSKQDILKELDIQNHPRIYAYSSDDAETRLKQNELIDEVTIEKGLFNPIEVNVKEHTIIAI 124
Cdd:COG1589    34 LLFSPLFPVREVEVEGNSHVSAEEIRAALGILLGGNLFTLDLDAIRERLEALPWVKSASVRRRWPDTLVIEVTEREPVAR 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2126543622 125 TTEKSRVVPMIENGKVLKDYKQEVPNEAPYIEGFKGAEKR--NLIDALQKMDRtTRAQISEIvsapQKDQPHLIKLFMRD 202
Cdd:COG1589   114 WNTGGGYYLVDADGVVFEAVSAEPPADLPLLTGPDGSEKAvlALLELLAALPE-LRLQISEI----SLSSRGRWTLTLDD 188

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 2126543622 203 GIEVV-GNTNTIAEKLKYYPSMSQALEKDetgklKKSGFIDLSV 245
Cdd:COG1589   189 GVEVRlGRSEDLAEKLARLAALLPQLLAG-----KGIAYIDLRY 227
POTRA_1 pfam08478
POTRA domain, FtsQ-type; FtsQ/DivIB bacterial division proteins (pfam03799) contain an ...
 49-119 8.43e-10

POTRA domain, FtsQ-type; FtsQ/DivIB bacterial division proteins (pfam03799) contain an N-terminal POTRA domain (for polypeptide-transport-associated domain). This is found in different types of proteins, usually associated with a transmembrane beta-barrel. FtsQ/DivIB may have chaperone-like roles, which has also been postulated for the POTRA domain in other contexts.


Pssm-ID: 430019 [Multi-domain]  Cd Length: 69  Bit Score: 54.11  E-value: 8.43e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2126543622  49 PISHIKsadIKGNHYVSKQDILKELDIQNHPRIYAYSSDDAETRLKQNELIDEVTIEKGLFNPIEVNVKEH 119
Cdd:pfam08478   2 PIRQVE---VSGNKHLSTEEIRKALGIQLGTSFFSLDLNAIEDRLEKLPWVKSATVRRQWPNTLRITVTER 69
FtsQ_DivIB_C pfam03799
Cell division protein FtsQ/DivIB, C-terminal; FtsQ is an essential cell division protein. It ...
 136-243 8.60e-09

Cell division protein FtsQ/DivIB, C-terminal; FtsQ is an essential cell division protein. It may link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. FtsQ may control the correct divisome assembly. DivIB is a cell division protein from Gram-positive bacteria, probably homologous to Escherichia coli FtsQ. DivIB interacts with FtsL, DivIC and PBP-2B. DivIB plays an essential role in division at high temperatures, maybe by protecting FtsL from degradation or by promoting formation of the FtsL-DivIC complex. It is also required for efficient sporulation at all temperatures. FtsQ and DivIB have a short N-terminal cytoplasmic domain and a larger C-terminal periplasmic domain. This entry represents the C-terminal region.


Pssm-ID: 461056  Cd Length: 113  Bit Score: 52.42  E-value: 8.60e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2126543622 136 ENGKVLKDYKQEvpNEAPYIEGFKGAEKrNLIDALQKMDRTTRAQISEIVsapqKDQPHLIKLFMRDGIEVV---GNTNT 212
Cdd:pfam03799  14 ADGEVFEAFADN--AGLPVLTGPEGSAK-EVLALLAALPPELKPRISEIS----LSARRRWTLMLDDGIEVRlgrEDVEE 86

                          90       100       110
                  ....*....|....*....|....*....|.
gi 2126543622 213 IAEKLKYYPSMSQALEKdetgKLKKSGFIDL 243
Cdd:pfam03799  87 DLAKLQRFVQLYPQLEE----LGRDIEYIDL 113
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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