|
Name |
Accession |
Description |
Interval |
E-value |
| ArgArg_F420 |
TIGR04465 |
TAT-translocated F420-dependent dehydrogenase, FGD2 family; Members of this family are ... |
2-363 |
0e+00 |
|
TAT-translocated F420-dependent dehydrogenase, FGD2 family; Members of this family are F420-binding enzymes with a proven functional N-terminal twin-arginine translocation (TAT) signal. Members are homologous to the cytosolic F420-dependent glucose-6-phosphate dehydrogenase but do not share the same function.
Pssm-ID: 275258 Cd Length: 364 Bit Score: 674.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 2 TGISRRTLGRLAVGAGVLASA--VQACAKPGAGHGRSGAPPAPAGKGVGFVLSHEQFRTDRLVAQAQAAERAGFTHVWAS 79
Cdd:TIGR04465 1 TGISRRTFGRLAAGAGVLGAAglAAGCAKPGTSHGTPAAPPEPAGKGVGFVLSHEQFRTDRLVAQAQAAEQAGFRYVWAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 80 DHIQPWQDNEGHSMFPWLTLALVGSSTSHVSFGTGVTCPTYRYHPATVAQAFASLAILNPGRVFLGVGTGERLNEQATTN 159
Cdd:TIGR04465 81 DHIQPWQDNEGHSMFPWLTLALVGNSTSHVSFGTGVTCPTYRYHPATVAQAFASLAILNPGRVFLGVGTGERLNEQAATN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 160 GYGNYTERHERLAEAIALIRQLWSGSRISFSGRYFQTNSLKLYDVPATPPPIFVAAGGPKSAKLAGQFGDGWITQSGDVT 239
Cdd:TIGR04465 161 QFGNYRERHDRLIEAIQLIRQLWSGQRISFSGRYFQTNSLKLYDVPATPPPIFVAAGGPKSATLAGQYGDGWITQARDVT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 240 NPKLLAAFGAGAQAAGRDVATLGKRAEMFAVVGDDAVAARAATLWRFTAGAVDQPDPVDIQRAAESNPTDKVLGGWTVGT 319
Cdd:TIGR04465 241 NPKLLAAFAAGAQAAGRDPATLGKRAELFAVVGDDAEAARAATLWRFTAGAVDQPNPVEIQRAAESNPIDKVLAGWTVGT 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2190611963 320 DAGRHVEAAQRVLDAGAVPFLHFPQDDPMVAIDFYRDNVLPKLR 363
Cdd:TIGR04465 321 DPAVHIGAVQAVLDAGAVPFLHFPQDDPVTAIEFYRTNVLPELH 364
|
|
| SsuD |
COG2141 |
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ... |
68-363 |
2.50e-50 |
|
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) [Coenzyme transport and metabolism, General function prediction only]; Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) is part of the Pathway/BioSystem: Pyrimidine degradation
Pssm-ID: 441744 [Multi-domain] Cd Length: 301 Bit Score: 170.50 E-value: 2.50e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 68 AERAGFTHVWASDHIQPWQdneGHSMFPWLTLALVGSSTSHVSFGTGVTCPTYRyHPATVAQAFASLAILNPGRVFLGVG 147
Cdd:COG2141 1 AERLGFDRVWVADHHFPPG---GASPDPWVLLAALAAATSRIRLGTGVVVLPLR-HPLVVAEQFATLDHLSGGRLDLGVG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 148 TGERLNEqATTNGYgNYTERHERLAEAIALIRQLWSGSRISFSGRYFQTNSLKLYDVPA--TPPPIFVAAGGPKSAKLAG 225
Cdd:COG2141 77 RGWGPDE-FAAFGL-DHDERYERFEEALEVLRRLWTGEPVTFEGEFFTVEGARLVPRPVqgPHPPIWIAGSSPAGARLAA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 226 QFGDGWITQSGDVTN-PKLLAAFGAGAQAAGRDVATLGKRAEMFAVVGDDAVAARAATLWRFTAGAVDQPDPVDIQRAAE 304
Cdd:COG2141 155 RLGDGVFTAGGTPEElAEAIAAYREAAAAAGRDPDDLRVSVGLHVIVAETDEEARERARPYLRALLALPRGRPPEEAEEG 234
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2190611963 305 SNPTDKVLG--GWTVGTDAGRHVEAAQRVLDAGAV-----PFLHFPQDDPMVAIDFYRDNVLPKLR 363
Cdd:COG2141 235 LTVREDLLEllGAALVGTPEQVAERLEELAEAAGVdefllQFPGLDPEDRLRSLELFAEEVLPLLR 300
|
|
| Bac_luciferase |
pfam00296 |
Luciferase-like monooxygenase; |
51-304 |
3.91e-42 |
|
Luciferase-like monooxygenase;
Pssm-ID: 425589 [Multi-domain] Cd Length: 313 Bit Score: 149.05 E-value: 3.91e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 51 LSHEQFRTDRLVAQAQAAERAGFTHVWASDHiqpWQDNEGHSmfPWLTLALVGSSTSHVSFGTGVTcPTYRYHPATVAQA 130
Cdd:pfam00296 15 LGAGSESLRYLVELARAAEELGFDGVWLAEH---HGGPGGPD--PFVVLAALAAATSRIRLGTAVV-PLPTRHPAVLAEQ 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 131 FASLAILNPGRVFLGVGTGERLNEQAttnGYG-NYTERHERLAEAIALIRQLWSGSRISFSGRYFQTNSLKLYDVPATPP 209
Cdd:pfam00296 89 AATLDHLSGGRFDLGLGTGGPAVEFR---RFGvDHDERYARLREFLEVLRRLWRGEPVDFEGEFFTLDGAFLLPRPVQGI 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 210 PIFVAAGGPKSAKLAGQFGDGWITQSGDV--TNPKLLAAFGAGAQAAGRDVATLGKRAEMFAVVGDDAVAARAATLWRFT 287
Cdd:pfam00296 166 PVWVAASSPAMLELAARHADGLLLWGFAPpaAAAELIERVRAGAAEAGRDPADIRVGASLTVIVADTEEEARAEARALIA 245
|
250
....*....|....*..
gi 2190611963 288 AGAVDQPDPVDIQRAAE 304
Cdd:pfam00296 246 GLPFYRMDSEGAGRLAE 262
|
|
| PRK02271 |
PRK02271 |
methylenetetrahydromethanopterin reductase; Provisional |
46-230 |
5.40e-24 |
|
methylenetetrahydromethanopterin reductase; Provisional
Pssm-ID: 235022 [Multi-domain] Cd Length: 325 Bit Score: 100.78 E-value: 5.40e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 46 GVGFVLSHEqfrTDRLVAQAQAAERAGFTHVWASDHIqpwqdNEGHsmfPWLTLALVGSSTSHVSFGTGVTCPtYRYHPA 125
Cdd:PRK02271 4 GIEFVPNHP---VKKIAYLAKLAEDNGFDYAWITDHY-----NNRD---VYMTLAAIAAATDTIKLGPGVTNP-YTRHPA 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 126 TVAQAFASLAILNPGRVFLGVGTGERlneqATTNGYGNYTERH-ERLAEAIALIRQLWSGSRISFSGRyFQTNSLKL-YD 203
Cdd:PRK02271 72 ITASAIATLDEISGGRAVLGIGPGDK----ATLDALGIEWEKPlRTVKEAIEVIRKLWAGERVEHDGT-FKAAGAKLnVK 146
|
170 180
....*....|....*....|....*..
gi 2190611963 204 VPATPPPIFVAAGGPKSAKLAGQFGDG 230
Cdd:PRK02271 147 PVQGEIPIYMGAQGPKMLELAGEIADG 173
|
|
| Tetrahydromethanopterin_reductase |
cd01097 |
N5,N10-methylenetetrahydromethanopterin reductase (Mer) catalyzes the reduction of N5, ... |
48-233 |
1.17e-15 |
|
N5,N10-methylenetetrahydromethanopterin reductase (Mer) catalyzes the reduction of N5,N10-methylenetetrahydromethanopterin with reduced coenzyme F420 to N5-methyltetrahydromethanopterin and oxidized coenzyme F420.
Pssm-ID: 238530 [Multi-domain] Cd Length: 202 Bit Score: 74.74 E-value: 1.17e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 48 GFVLSHEQFRTDRLVAQAQAAERAGFTHVWASdhiqpwqdneghsmfpwltlalvgsstshvsfgtgvtcptyryhpatv 127
Cdd:cd01097 4 GIFLSPEQPGPRELVELARAAEEAGFDSVWVS------------------------------------------------ 35
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 128 aqafasLAILNPGRVFLGVGTGERLNEQATTNGYGNYTERHERLAEAIALIRQLWSGSRISFSGRYFQTNSLKLYDVPAT 207
Cdd:cd01097 36 ------LDALSGGRFILGLGAGGPEVEEGWGGPWFKPPARRREELEAIRRLRALRRGDPVGEDGRFLGTRSAALPPPPRG 109
|
170 180
....*....|....*....|....*.
gi 2190611963 208 PPPIFVAAGGPKSAKLAGQFGDGWIT 233
Cdd:cd01097 110 EIPIYIGALGPKMLELAGEIADGWLP 135
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ArgArg_F420 |
TIGR04465 |
TAT-translocated F420-dependent dehydrogenase, FGD2 family; Members of this family are ... |
2-363 |
0e+00 |
|
TAT-translocated F420-dependent dehydrogenase, FGD2 family; Members of this family are F420-binding enzymes with a proven functional N-terminal twin-arginine translocation (TAT) signal. Members are homologous to the cytosolic F420-dependent glucose-6-phosphate dehydrogenase but do not share the same function.
Pssm-ID: 275258 Cd Length: 364 Bit Score: 674.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 2 TGISRRTLGRLAVGAGVLASA--VQACAKPGAGHGRSGAPPAPAGKGVGFVLSHEQFRTDRLVAQAQAAERAGFTHVWAS 79
Cdd:TIGR04465 1 TGISRRTFGRLAAGAGVLGAAglAAGCAKPGTSHGTPAAPPEPAGKGVGFVLSHEQFRTDRLVAQAQAAEQAGFRYVWAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 80 DHIQPWQDNEGHSMFPWLTLALVGSSTSHVSFGTGVTCPTYRYHPATVAQAFASLAILNPGRVFLGVGTGERLNEQATTN 159
Cdd:TIGR04465 81 DHIQPWQDNEGHSMFPWLTLALVGNSTSHVSFGTGVTCPTYRYHPATVAQAFASLAILNPGRVFLGVGTGERLNEQAATN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 160 GYGNYTERHERLAEAIALIRQLWSGSRISFSGRYFQTNSLKLYDVPATPPPIFVAAGGPKSAKLAGQFGDGWITQSGDVT 239
Cdd:TIGR04465 161 QFGNYRERHDRLIEAIQLIRQLWSGQRISFSGRYFQTNSLKLYDVPATPPPIFVAAGGPKSATLAGQYGDGWITQARDVT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 240 NPKLLAAFGAGAQAAGRDVATLGKRAEMFAVVGDDAVAARAATLWRFTAGAVDQPDPVDIQRAAESNPTDKVLGGWTVGT 319
Cdd:TIGR04465 241 NPKLLAAFAAGAQAAGRDPATLGKRAELFAVVGDDAEAARAATLWRFTAGAVDQPNPVEIQRAAESNPIDKVLAGWTVGT 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2190611963 320 DAGRHVEAAQRVLDAGAVPFLHFPQDDPMVAIDFYRDNVLPKLR 363
Cdd:TIGR04465 321 DPAVHIGAVQAVLDAGAVPFLHFPQDDPVTAIEFYRTNVLPELH 364
|
|
| F420_G6P_family |
TIGR03557 |
F420-dependent oxidoreductase, G6PDH family; Members of this protein family include ... |
47-363 |
1.02e-80 |
|
F420-dependent oxidoreductase, G6PDH family; Members of this protein family include F420-dependent glucose-6-phosphate dehydrogenases (TIGR03554) and related proteins. All members of this family come from species that synthesize coenzyme F420, with the exception of those that belong to TIGR03885, a clade within this family in which cofactor binding may instead be directed to FMN. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 274645 Cd Length: 316 Bit Score: 249.22 E-value: 1.02e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 47 VGFVLSHEQFRTDRLVAQAQAAERAGFTHVWASDHIQPWQDNEGHSMFPWLTLALVGSSTSHVSFGTGVTCPTYRYHPAT 126
Cdd:TIGR03557 1 IGYFLMCEQSGPRELVRQAVAAEQAGFDFLWISDHFHPWLDEQGHSPFVWSVLGALAQATERLPLTTAVTCPTMRYHPAI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 127 VAQAFASLAILNPGRVFLGVGTGERLNEQATTNGYGNYTERHERLAEAIALIRQLWSGSRISFSGRYFQTNSLKLYDVPA 206
Cdd:TIGR03557 81 VAQAAATSAVLSDGRFTLGLGSGENLNEHVVGDGWPSVDVRLEMLREAVEIIRELWQGGYVDHRGKHYTVDSARLYDLPE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 207 TPPPIFVAAGGPKSAKLAGQFGDGWITQSGDvtnPKLLAAFGAGAQAAGRDVATLgkraemfAVVGD---DAVAARAATL 283
Cdd:TIGR03557 161 EPPPIGVSAFGPRAVRLAARIGDGLIATEPD---ADLVEAFREAGGGGKPVQGQV-------PVCWDpdeDAAVKTAHRQ 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 284 WRFTA--GAVDQ--PDPVDIQRAAESNPTDKVLGGWTVGTDAGRHVEAAQRVLDAGAVP-FLHFPQDDPMVAIDFYRDNV 358
Cdd:TIGR03557 231 FRWFAlgWKVNQelPTPAHFAAATQLVREEDVAASIPCGPDPDRHVEAVREYVDAGFDEvALVQIGPDQDGFFDFYATEL 310
|
....*
gi 2190611963 359 LPKLR 363
Cdd:TIGR03557 311 LPALR 315
|
|
| flavin_revert |
TIGR03885 |
probable non-F420 flavinoid oxidoreductase; This model represents a clade of proteins within ... |
47-362 |
2.39e-57 |
|
probable non-F420 flavinoid oxidoreductase; This model represents a clade of proteins within the larger subfamily TIGR03557. The parent model includes the F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554) and many other proteins. Excepting the members of this family, all members of TIGR03557 occur in species capable of synthesizing coenzyme F420. All members of the seed alignment for this model are from species that lack F420 biosynthesis. It is suggested that members of this family bind FMN, or FO, or a novel flavinoid cofactor, but not F420 per se. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 274834 Cd Length: 315 Bit Score: 189.14 E-value: 2.39e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 47 VGFVLSHEQFRTDRLVAQAQAAERAGFTHVWASDHIQPWQDNEGHSMFPWLTLALVGSSTShVSFGTgVTCPTYRYHPAT 126
Cdd:TIGR03885 1 IGYHASHEQFAPSDLLQYVQAAEQAGFDAVMSSDHFHPWSERQGQSGFAWSWLGAALQATS-LPFGI-VTAPGQRYHPAI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 127 VAQAFASLAILNPGRVFLGVGTGERLNEQATTNGYGNYTERHERLAEAIALIRQLWSGSRISFSGRyFQTNSLKLYDVPA 206
Cdd:TIGR03885 79 LAQAAATLAEMFPGRFWIALGSGEALNEHITGDAWPAKAERNARLRECAEIIRALLRGETVTHRGL-VTVEEARLYSLPE 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 207 TPPPIFVAAGGPKSAKLAGQFGDGWITqsgdVTNPKllaAFGAGAQAAGRDVATLGKRAEMFAVV--GDDAVAARAATL- 283
Cdd:TIGR03885 158 TPPPLIGAALTVETARWAGAWADGLIT----VNQPP---EKLQEIVEAFREGGGAGKPVYLQVQLsyAPTEEEALAAAHe 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 284 -WRFTA----GAVDQPDPVDIQRAAESNPTDKVLGGWTVGTDAGRHVEAAQRVLDAGAVP-FLHFPQDDPMVAIDFYRDN 357
Cdd:TIGR03885 231 qWRNNVlppeVLWDLRRPEDFDAAARSVRPEDVDEHVRISDDLGQHAEWIQELADLGFDEiYLHNVGRDQERFIDDFGEH 310
|
....*
gi 2190611963 358 VLPKL 362
Cdd:TIGR03885 311 VLPAL 315
|
|
| SsuD |
COG2141 |
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ... |
68-363 |
2.50e-50 |
|
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) [Coenzyme transport and metabolism, General function prediction only]; Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) is part of the Pathway/BioSystem: Pyrimidine degradation
Pssm-ID: 441744 [Multi-domain] Cd Length: 301 Bit Score: 170.50 E-value: 2.50e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 68 AERAGFTHVWASDHIQPWQdneGHSMFPWLTLALVGSSTSHVSFGTGVTCPTYRyHPATVAQAFASLAILNPGRVFLGVG 147
Cdd:COG2141 1 AERLGFDRVWVADHHFPPG---GASPDPWVLLAALAAATSRIRLGTGVVVLPLR-HPLVVAEQFATLDHLSGGRLDLGVG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 148 TGERLNEqATTNGYgNYTERHERLAEAIALIRQLWSGSRISFSGRYFQTNSLKLYDVPA--TPPPIFVAAGGPKSAKLAG 225
Cdd:COG2141 77 RGWGPDE-FAAFGL-DHDERYERFEEALEVLRRLWTGEPVTFEGEFFTVEGARLVPRPVqgPHPPIWIAGSSPAGARLAA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 226 QFGDGWITQSGDVTN-PKLLAAFGAGAQAAGRDVATLGKRAEMFAVVGDDAVAARAATLWRFTAGAVDQPDPVDIQRAAE 304
Cdd:COG2141 155 RLGDGVFTAGGTPEElAEAIAAYREAAAAAGRDPDDLRVSVGLHVIVAETDEEARERARPYLRALLALPRGRPPEEAEEG 234
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2190611963 305 SNPTDKVLG--GWTVGTDAGRHVEAAQRVLDAGAV-----PFLHFPQDDPMVAIDFYRDNVLPKLR 363
Cdd:COG2141 235 LTVREDLLEllGAALVGTPEQVAERLEELAEAAGVdefllQFPGLDPEDRLRSLELFAEEVLPLLR 300
|
|
| Bac_luciferase |
pfam00296 |
Luciferase-like monooxygenase; |
51-304 |
3.91e-42 |
|
Luciferase-like monooxygenase;
Pssm-ID: 425589 [Multi-domain] Cd Length: 313 Bit Score: 149.05 E-value: 3.91e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 51 LSHEQFRTDRLVAQAQAAERAGFTHVWASDHiqpWQDNEGHSmfPWLTLALVGSSTSHVSFGTGVTcPTYRYHPATVAQA 130
Cdd:pfam00296 15 LGAGSESLRYLVELARAAEELGFDGVWLAEH---HGGPGGPD--PFVVLAALAAATSRIRLGTAVV-PLPTRHPAVLAEQ 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 131 FASLAILNPGRVFLGVGTGERLNEQAttnGYG-NYTERHERLAEAIALIRQLWSGSRISFSGRYFQTNSLKLYDVPATPP 209
Cdd:pfam00296 89 AATLDHLSGGRFDLGLGTGGPAVEFR---RFGvDHDERYARLREFLEVLRRLWRGEPVDFEGEFFTLDGAFLLPRPVQGI 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 210 PIFVAAGGPKSAKLAGQFGDGWITQSGDV--TNPKLLAAFGAGAQAAGRDVATLGKRAEMFAVVGDDAVAARAATLWRFT 287
Cdd:pfam00296 166 PVWVAASSPAMLELAARHADGLLLWGFAPpaAAAELIERVRAGAAEAGRDPADIRVGASLTVIVADTEEEARAEARALIA 245
|
250
....*....|....*..
gi 2190611963 288 AGAVDQPDPVDIQRAAE 304
Cdd:pfam00296 246 GLPFYRMDSEGAGRLAE 262
|
|
| F420_Rv2161c |
TIGR03619 |
probable F420-dependent oxidoreductase, Rv2161c family; Coenzyme F420 has a limited ... |
62-283 |
1.47e-32 |
|
probable F420-dependent oxidoreductase, Rv2161c family; Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes a domain found in a distinctive subset of bacterial luciferase homologs, found only in F420-biosynthesizing members of the Actinobacteria. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 274680 [Multi-domain] Cd Length: 246 Bit Score: 121.98 E-value: 1.47e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 62 VAQAQAAERAGFTHVWASDH-------IQPWQDNEGHSMF-----PWLTLALVGSSTSHVSFGTGVTCPTYRyHPATVAQ 129
Cdd:TIGR03619 1 AELARAAEELGFDSLLAYEHvaiparrETPWPDSGGGDAPdrtldPFVALAFAAAVTSRLRLGTGVLVLPQR-DPLLLAK 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 130 AFASLAILNPGRVFLGVGTGERLNEQATTNGygNYTERHERLAEAIALIRQLWSGSRISFSGRYFQTNSLKLYDVPAT-P 208
Cdd:TIGR03619 80 QAATLDLLSGGRLRLGVGVGWLREEFRALGV--DFDERGRLLDEAIEALRALWTQDPVSFHGEFVDFDPAVVRPKPVQrP 157
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2190611963 209 PPIFVAAGGPKSAKLAGQFGDGWITQSGDVTN-PKLLAAFGAGAQAAGRDVATLGKRAEMFAVVGD-DAVAARAATL 283
Cdd:TIGR03619 158 PPIWIGGNSEAALRRAARLGDGWMPFGPPVDRlAAAVARLRDLAAAAGRDPDAVEVVLVRTDPDGDaDADAEDLAAY 234
|
|
| PRK02271 |
PRK02271 |
methylenetetrahydromethanopterin reductase; Provisional |
46-230 |
5.40e-24 |
|
methylenetetrahydromethanopterin reductase; Provisional
Pssm-ID: 235022 [Multi-domain] Cd Length: 325 Bit Score: 100.78 E-value: 5.40e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 46 GVGFVLSHEqfrTDRLVAQAQAAERAGFTHVWASDHIqpwqdNEGHsmfPWLTLALVGSSTSHVSFGTGVTCPtYRYHPA 125
Cdd:PRK02271 4 GIEFVPNHP---VKKIAYLAKLAEDNGFDYAWITDHY-----NNRD---VYMTLAAIAAATDTIKLGPGVTNP-YTRHPA 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 126 TVAQAFASLAILNPGRVFLGVGTGERlneqATTNGYGNYTERH-ERLAEAIALIRQLWSGSRISFSGRyFQTNSLKL-YD 203
Cdd:PRK02271 72 ITASAIATLDEISGGRAVLGIGPGDK----ATLDALGIEWEKPlRTVKEAIEVIRKLWAGERVEHDGT-FKAAGAKLnVK 146
|
170 180
....*....|....*....|....*..
gi 2190611963 204 VPATPPPIFVAAGGPKSAKLAGQFGDG 230
Cdd:PRK02271 147 PVQGEIPIYMGAQGPKMLELAGEIADG 173
|
|
| Tetrahydromethanopterin_reductase |
cd01097 |
N5,N10-methylenetetrahydromethanopterin reductase (Mer) catalyzes the reduction of N5, ... |
48-233 |
1.17e-15 |
|
N5,N10-methylenetetrahydromethanopterin reductase (Mer) catalyzes the reduction of N5,N10-methylenetetrahydromethanopterin with reduced coenzyme F420 to N5-methyltetrahydromethanopterin and oxidized coenzyme F420.
Pssm-ID: 238530 [Multi-domain] Cd Length: 202 Bit Score: 74.74 E-value: 1.17e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 48 GFVLSHEQFRTDRLVAQAQAAERAGFTHVWASdhiqpwqdneghsmfpwltlalvgsstshvsfgtgvtcptyryhpatv 127
Cdd:cd01097 4 GIFLSPEQPGPRELVELARAAEEAGFDSVWVS------------------------------------------------ 35
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 128 aqafasLAILNPGRVFLGVGTGERLNEQATTNGYGNYTERHERLAEAIALIRQLWSGSRISFSGRYFQTNSLKLYDVPAT 207
Cdd:cd01097 36 ------LDALSGGRFILGLGAGGPEVEEGWGGPWFKPPARRREELEAIRRLRALRRGDPVGEDGRFLGTRSAALPPPPRG 109
|
170 180
....*....|....*....|....*.
gi 2190611963 208 PPPIFVAAGGPKSAKLAGQFGDGWIT 233
Cdd:cd01097 110 EIPIYIGALGPKMLELAGEIADGWLP 135
|
|
| F420_Rv3520c |
TIGR03559 |
probable F420-dependent oxidoreductase, Rv3520c family; Members of this protein family are ... |
62-231 |
1.65e-12 |
|
probable F420-dependent oxidoreductase, Rv3520c family; Members of this protein family are predicted to be oxidoreductases dependent on coenzyme F420. The family includes a single member in Mycobacterium tuberculosis (Rv3520c/MT3621) but four in Mycobacterium smegmatis. Prediction that this family is F420-dependent is based primarily on Partial Phylogenetic Profiling vs. F420 biosynthesis. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 274647 Cd Length: 325 Bit Score: 67.36 E-value: 1.65e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 62 VAQAQAAERAGFTHVWA-----SDHIQPwqdneghsmfpwltLALVGSSTSHVSFGTGVtCPTYRYHPATVAQAFASLAI 136
Cdd:TIGR03559 16 VDLVAAAEKAGLDSVWVaeaygFDAVTP--------------LGYLAARTSRVRLGTGV-LQLYARTPTLTAMTAAGLDH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 137 LNPGRVFLGVGTGerlNEQATTNGYGN-YTERHERLAEAIALIRQLWS-GSRISFSGRYfqtnslklYDVPATPP----- 209
Cdd:TIGR03559 81 LSGGRFILGLGAS---GPQVVEGWHGVpFDRPLGRTREYIEICRKVWRrEGPVTHDGRH--------YQLPLPGDrgtgl 149
|
170 180 190
....*....|....*....|....*....|....*..
gi 2190611963 210 ---------------PIFVAAGGPKSAKLAGQFGDGW 231
Cdd:TIGR03559 150 gkplklinhpvrariPIYLAALGPKNVALTAEIADGW 186
|
|
| Alkanesulfonate_monoxygenase |
cd01094 |
Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the ... |
48-229 |
4.30e-12 |
|
Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the conversion of alkanesulfonates to the corresponding aldehyde and sulfite. Alkanesulfonate monoxygenase (SsuD) has an absolute requirement for reduced flavin mononucleotide (FMNH2), which is provided by the NADPH-dependent FMN oxidoreductase (SsuE).
Pssm-ID: 238527 [Multi-domain] Cd Length: 244 Bit Score: 65.37 E-value: 4.30e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 48 GFVLSHEQFRT----DRLVAQAQAAERAGFTHVW-ASDHIQPWqdneghsmfPWLTLALVGSSTSHVSFGTGVTcpTYRY 122
Cdd:cd01094 13 GWSLSTPPRGRpwdfEYNRQIAQAAEELGFDGALsPTGSSGPD---------GWTVAAALAAATERLKFLVAIR--PGLI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 123 HPATVAQAFASLAILNPGRVFLGVGTGERLNEQATTNGYGNYTERHERLAEAIALIRQLWSG-SRISFSGRYFQTN--SL 199
Cdd:cd01094 82 APTVAARQAATLDHISGGRLGLNVVTGGDPAELRMDGDFLDHDERYARADEFLEVLRRLWTSdEPFDFEGKFYRFKnaFL 161
|
170 180 190
....*....|....*....|....*....|
gi 2190611963 200 KLYDVPATPPPIFVAAGGPKSAKLAGQFGD 229
Cdd:cd01094 162 RPKPPQQPHPPIYFGGSSEAAIEFAARHAD 191
|
|
| Nitrilotriacetate_monoxgenase |
cd01095 |
nitrilotriacetate monoxygenase oxidizes nitrilotriacetate utilizing reduced flavin ... |
29-182 |
2.30e-07 |
|
nitrilotriacetate monoxygenase oxidizes nitrilotriacetate utilizing reduced flavin mononucleotide (FMNH2) and oxygen. The FMNH2 is provided by an NADH:flavin mononucleotide (FMN) oxidorductase that uses NADH to reduce FMN to FMNH2.
Pssm-ID: 238528 [Multi-domain] Cd Length: 358 Bit Score: 51.94 E-value: 2.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 29 PGAGHGRSGAPPAPAGKGVGFvlsheqfrtDRLVAQAQAAERAGFTHVWASDHIQPWQDNEGH---SMFPWLTLALVGSS 105
Cdd:cd01095 9 GAGHHAAAWRHPAPPDASIDF---------DHYVRLARTAERAKFDAVFLADGLAIRALSRPHpvaRLEPLTLLAALAAV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 106 TSHVsfGTGVTCPTYRYHPATVAQAFASLAILNPGRVFLGVGTGerLNEQATTN-GYGN---YTERHERLAEAIALIRQL 181
Cdd:cd01095 80 TERI--GLVATASTTYNEPYHLARRFASLDHISGGRAGWNVVTS--ANPGEARNfGRDEhpeHDERYARAEEFVEVVKGL 155
|
.
gi 2190611963 182 W 182
Cdd:cd01095 156 W 156
|
|
| PRK00719 |
PRK00719 |
alkanesulfonate monooxygenase; Provisional |
65-233 |
7.14e-03 |
|
alkanesulfonate monooxygenase; Provisional
Pssm-ID: 234821 [Multi-domain] Cd Length: 378 Bit Score: 38.01 E-value: 7.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 65 AQAAERAGFTHVWasdhIQPWQDNEGhsmfPWLTLALVGSSTSHVSF----GTGVTCPTyryhpaTVAQAFASLAILNPG 140
Cdd:PRK00719 34 AQAADRLGYTGVL----IPTGRSCED----AWLVAASLIPVTQRLKFlvalRPGLMSPT------VAARMAATLDRLSNG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2190611963 141 RVFLGVGTGERLNEQATTNGYGNYTERHERLAEAIALIRQLWSGSRISFSGRYFQTNSLKLYDVPA-TP-PPIFVAAGGP 218
Cdd:PRK00719 100 RLLINLVTGGDPAELAGDGLFLDHDERYEASAEFLRIWRRLLEGETVDFEGKHIQVKGAKLLFPPVqQPyPPLYFGGSSD 179
|
170
....*....|....*
gi 2190611963 219 KSAKLAGQFGDGWIT 233
Cdd:PRK00719 180 AAQELAAEQVDLYLT 194
|
|
| |
