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Conserved domains on  [gi|2202543355|gb|UMK69433|]
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ATP synthase F0 subunit 6, partial [Toxeutes pascoei]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-223 2.57e-109

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 312.87  E-value: 2.57e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355   1 MNNLFSSFDPSTNLGLSLNWMSTLIGIMVIPPSFWLIPSRLSILWIMIINILHKEFKILLGTNNpKGTTLMFVSLFSLIL 80
Cdd:MTH00157    2 MTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKN-KGSTLIFISLFSFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  81 FNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGTLAVRL 160
Cdd:MTH00157   81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2202543355 161 SANMIAGHLLMTLLGNTGPTLSLFMINFLIMAQIMLLILESAVAIIQSYVFAVLSTLYSSEVT 223
Cdd:MTH00157  161 AANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-223 2.57e-109

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 312.87  E-value: 2.57e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355   1 MNNLFSSFDPSTNLGLSLNWMSTLIGIMVIPPSFWLIPSRLSILWIMIINILHKEFKILLGTNNpKGTTLMFVSLFSLIL 80
Cdd:MTH00157    2 MTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKN-KGSTLIFISLFSFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  81 FNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGTLAVRL 160
Cdd:MTH00157   81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2202543355 161 SANMIAGHLLMTLLGNTGPTLSLFMINFLIMAQIMLLILESAVAIIQSYVFAVLSTLYSSEVT 223
Cdd:MTH00157  161 AANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-221 7.28e-49

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 159.29  E-value: 7.28e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355   4 LFSSFDPS--TNLGLSLNWMSTLIG----IMVIPPSFWLIPSRLSILWIMIINILHKEFKILLGTNNPKgTTLMFVSLFS 77
Cdd:TIGR01131   1 LFSQFDISpiTLFSLTLLSLILLLSllifLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  78 LILFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGTLA 157
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2202543355 158 VRLSANMIAGHLLMTLLGNTGPTL-SLFMINFLIMAQIMLLILESAVAIIQSYVFAVLSTLYSSE 221
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLmSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 66-220 4.29e-44

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 144.85  E-value: 4.29e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  66 KGTTLMFVSLFSLILFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIE 145
Cdd:cd00310     2 KKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIE 81

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2202543355 146 TISNMIRPGTLAVRLSANMIAGHLLMTLLGNTGPTLSLFMINFLIMAQIMLLILESAVAIIQSYVFAVLSTLYSS 220
Cdd:cd00310    82 LISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
36-220 6.69e-31

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 112.97  E-value: 6.69e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  36 LIPSRLSILWIMIINILHKEFKILLGTNNPKGTTLMFVSLFSLILFNNFIGLF---PYIFTSTSHITLTLSLALPLWLSF 112
Cdd:pfam00119  25 LVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLV 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355 113 MIYG-WTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGTLAVRLSANMIAGHLLMTLLGNTGPTLS---LFMINF 188
Cdd:pfam00119 105 HYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLsagFLLGVI 184

                         170       180       190
                  ....*....|....*....|....*....|..
gi 2202543355 189 LIMAQIMLLILESAVAIIQSYVFAVLSTLYSS 220
Cdd:pfam00119 185 PPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 36-218 5.10e-25

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 97.45  E-value: 5.10e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  36 LIPSRLSILWIMIINILHKEFKILLGTNNPKGTTLMFvSLFSLILFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIY 115
Cdd:COG0356    26 LVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLL-TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYY 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355 116 G-WTNNTINMLAHLVPQGTPPaLMPFMVCIETISNMIRPGTLAVRLSANMIAGHLLMTLLGNTGPTLSLFMINFLImaQI 194
Cdd:COG0356   105 GiKKKGLGGYLKHLFFPPFPW-LAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PV 181

                         170       180
                  ....*....|....*....|....
gi 2202543355 195 MLLILESAVAIIQSYVFAVLSTLY 218
Cdd:COG0356   182 AWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-223 2.57e-109

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 312.87  E-value: 2.57e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355   1 MNNLFSSFDPSTNLGLSLNWMSTLIGIMVIPPSFWLIPSRLSILWIMIINILHKEFKILLGTNNpKGTTLMFVSLFSLIL 80
Cdd:MTH00157    2 MTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKN-KGSTLIFISLFSFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  81 FNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGTLAVRL 160
Cdd:MTH00157   81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2202543355 161 SANMIAGHLLMTLLGNTGPTLSLFMINFLIMAQIMLLILESAVAIIQSYVFAVLSTLYSSEVT 223
Cdd:MTH00157  161 AANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-223 7.53e-50

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 162.12  E-value: 7.53e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355   1 MNNLFSSFDPSTNL---GLSLNWMSTLIGIMVIPPSFWLIPSRLSILWIMIINIlHKEFKILLGTNNPKGTTLMFVSLFS 77
Cdd:MTH00176    2 LVDLFSSFDPPNKNifsMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTF-LPEMILRSNGSYILGSASIIISLFI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  78 LILFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGTLA 157
Cdd:MTH00176   81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2202543355 158 VRLSANMIAGHLLMTLLGNTGPTLSLFMI---NFLIMAQIMLLILESAVAIIQSYVFAVLSTLYSSEVT 223
Cdd:MTH00176  161 VRLAANLSAGHLLLGLLGAAMWGLLPVSPligFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-221 7.28e-49

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 159.29  E-value: 7.28e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355   4 LFSSFDPS--TNLGLSLNWMSTLIG----IMVIPPSFWLIPSRLSILWIMIINILHKEFKILLGTNNPKgTTLMFVSLFS 77
Cdd:TIGR01131   1 LFSQFDISpiTLFSLTLLSLILLLSllifLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  78 LILFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGTLA 157
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2202543355 158 VRLSANMIAGHLLMTLLGNTGPTL-SLFMINFLIMAQIMLLILESAVAIIQSYVFAVLSTLYSSE 221
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLmSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 66-220 4.29e-44

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 144.85  E-value: 4.29e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  66 KGTTLMFVSLFSLILFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIE 145
Cdd:cd00310     2 KKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIE 81

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2202543355 146 TISNMIRPGTLAVRLSANMIAGHLLMTLLGNTGPTLSLFMINFLIMAQIMLLILESAVAIIQSYVFAVLSTLYSS 220
Cdd:cd00310    82 LISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-218 1.05e-42

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 143.55  E-value: 1.05e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355   1 MN-NLFSSFDPSTNLGLSLNWMSTLIGIMVIPPSFWLIPSRLSILWIMIINILHKEfkiLLGTNNPKGTT--LMFVSLFS 77
Cdd:MTH00101    1 MNeNLFASFITPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQ---MMTIHNTKGQTwsLMLMSLIL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  78 LILFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGTLA 157
Cdd:MTH00101   78 FIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALA 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2202543355 158 VRLSANMIAGHLLMTLLGNTGPTLS-----LFMINFLIMaqIMLLILESAVAIIQSYVFAVLSTLY 218
Cdd:MTH00101  158 VRLTANITAGHLLIHLIGGATLALMsisttTALITFIIL--ILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-221 3.22e-42

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 142.70  E-value: 3.22e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355   1 MNNLFSSFDPSTNLGLSLN---WMSTLIGIMVIPPSFWLIPSRLSILWIMIINILHKEFKILLGTNNPkGTTLMFVSLFS 77
Cdd:MTH00173    2 MVDLFSSFDDHNSSFSSLSflmWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLG-GFSLLLSSLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  78 LILFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGTLA 157
Cdd:MTH00173   81 FLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLT 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2202543355 158 VRLSANMIAGHLLMTLLGNTGPTL----SLFMINFLIMAQIMLLILESAVAIIQSYVFAVLSTLYSSE 221
Cdd:MTH00173  161 VRLLANISAGHIVLTLIGNYLSSSlfssSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-221 4.13e-41

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 139.87  E-value: 4.13e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355   1 MNNLFSSFDPSTN-----LGLSLNWMSTLIGIMVIPPSFWLIPSRLSILWIMIINILHKEFKILLGTNnPKGTTLMFVSL 75
Cdd:MTH00005    2 LTDIFSSFDPATNslfnnLSSTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKH-LKGFSSLISAL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  76 FSLILFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGT 155
Cdd:MTH00005   81 FTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPIT 160

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2202543355 156 LAVRLSANMIAGHLLMTLLGNT------GPTLSLFMinfLIMAQIMLLILESAVAIIQSYVFAVLSTLYSSE 221
Cdd:MTH00005  161 LSFRLAANMSAGHIVLSLIGIYaasalfSSISSTIL---LILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 2-221 6.65e-41

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 138.95  E-value: 6.65e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355   2 NNLFSSFDPSTNLGLSLNWMSTLIGI---MVIPPSFWLiPSRLSILWIMIINILhkeFKILLGTNNPKGT--TLMFVSLF 76
Cdd:MTH00035    5 NSIFGQFSPDTILFIPLTLLSSVIALswlFFINPTNWL-PSRSQSIWLTFRQEI---LKLIFQNTNPNTApwAGLLTTVF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  77 SLILFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGTL 156
Cdd:MTH00035   81 ILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIAL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2202543355 157 AVRLSANMIAGHLLMTLLGNTGPTLS----LFMINFLIMaqIMLLILESAVAIIQSYVFAVLSTLYSSE 221
Cdd:MTH00035  161 GLRLAANLTAGHLLIFLLSTAIWELSnsplISIITLIIF--FLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-223 1.42e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 133.03  E-value: 1.42e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355   1 MNNLFSSFDPSTNLGLSLNWMSTLIGIMVIP-PSFWLIPSRLSILWIMIINILHKEFKILLGTNNPKgTTLMFVSLFSLI 79
Cdd:MTH00120    2 NLNFFDQFSSPELLGIPLILLAMLIPALLIPsPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHK-WALILTSLMLLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  80 LFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGTLAVR 159
Cdd:MTH00120   81 LLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2202543355 160 LSANMIAGHLLMTL-------LGNTGPTLSLFMINFLimaqIMLLILESAVAIIQSYVFAVLSTLYSSEVT 223
Cdd:MTH00120  161 LTANLTAGHLLIQListatlnLLPTMPTLSLLTLIIL----LLLTILELAVAMIQAYVFVLLLSLYLQENT 227
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-221 2.08e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 132.76  E-value: 2.08e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355   1 MNNLFSSFDPSTNLGLSLNWMSTLIG-IMVIPPSFWLIPSRLSILWIMIINILHKEFKILLGTNNPKGTtLMFVSLFSLI 79
Cdd:MTH00179    2 MLSMFDQFESPSLLGIPLLALALLLPwLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWA-VLFLSLMLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  80 LFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGTLAVR 159
Cdd:MTH00179   81 LTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2202543355 160 LSANMIAGHLLMTLLGNTGPTLSLFMINFLIMAQ---IMLLILESAVAIIQSYVFAVLSTLYSSE 221
Cdd:MTH00179  161 LTANITAGHLLMHLISSAVFVLMNFMGMVALLTLlvlFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-221 2.63e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 119.30  E-value: 2.63e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355   1 MNNLFSSFDPSTNLGLSLNWMSTLIGIMVIP-PSFWLIPSRLSILWIMIINILHKEFKILLGTNNPKgTTLMFVSLFSLI 79
Cdd:MTH00073    2 NLSFFDQFLSPTLLGIPLIMLAMLLPWLLFPtPTNKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHK-WALILTSLMVFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  80 LFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGTLAVR 159
Cdd:MTH00073   81 ITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2202543355 160 LSANMIAGHLLMTLLGNTGPTLSLFMINFLIMAQIMLL---ILESAVAIIQSYVFAVLSTLYSSE 221
Cdd:MTH00073  161 LTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFlltLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 70-221 1.02e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 118.05  E-value: 1.02e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  70 LMFVSLFSLILFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIETISN 149
Cdd:MTH00132   71 LLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2202543355 150 MIRPGTLAVRLSANMIAGHLLMTLLGNTGPTLSLFMINFLIMAQIMLL---ILESAVAIIQSYVFAVLSTLYSSE 221
Cdd:MTH00132  151 FIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFlltLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP-synt_A pfam00119
ATP synthase A chain;
36-220 6.69e-31

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 112.97  E-value: 6.69e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  36 LIPSRLSILWIMIINILHKEFKILLGTNNPKGTTLMFVSLFSLILFNNFIGLF---PYIFTSTSHITLTLSLALPLWLSF 112
Cdd:pfam00119  25 LVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLV 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355 113 MIYG-WTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGTLAVRLSANMIAGHLLMTLLGNTGPTLS---LFMINF 188
Cdd:pfam00119 105 HYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLsagFLLGVI 184

                         170       180       190
                  ....*....|....*....|....*....|..
gi 2202543355 189 LIMAQIMLLILESAVAIIQSYVFAVLSTLYSS 220
Cdd:pfam00119 185 PPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 36-218 6.67e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 108.20  E-value: 6.67e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  36 LIPSRLSILWIMIINILHKEFKILLGTNNPKGTTLMFvSLFSLILFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIY 115
Cdd:MTH00172   40 LIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFII-SLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLA 118

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355 116 GWTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGTLAVRLSANMIAGHLLMTLLGNTG---PTLSLFMINFLIMA 192
Cdd:MTH00172  119 GFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGFGfnmLCASGFLSLFPLLI 198

                         170       180
                  ....*....|....*....|....*.
gi 2202543355 193 QIMLLILESAVAIIQSYVFAVLSTLY 218
Cdd:MTH00172  199 MVFITLLEIAVAVIQAYVFCLLTTIY 224
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 35-218 7.15e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 103.16  E-value: 7.15e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  35 WLIPSRLSILWIMIINILHKEFKILLGTNNPKGTTLMFvSLFSLILFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMI 114
Cdd:MTH00175   50 KLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFIL-SLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTL 128

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355 115 YGWTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGTLAVRLSANMIAGHLLMT--------LLGNTGPTLSLFMI 186
Cdd:MTH00175  129 LGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAilsgfafnMLSNGLIILSLFPM 208

                         170       180       190
                  ....*....|....*....|....*....|..
gi 2202543355 187 nfLIMaqIMLLILESAVAIIQSYVFAVLSTLY 218
Cdd:MTH00175  209 --LIM--IFITLLEMAVAVIQAYVFCLLTTIY 236
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 36-218 5.10e-25

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 97.45  E-value: 5.10e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  36 LIPSRLSILWIMIINILHKEFKILLGTNNPKGTTLMFvSLFSLILFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIY 115
Cdd:COG0356    26 LVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLL-TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYY 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355 116 G-WTNNTINMLAHLVPQGTPPaLMPFMVCIETISNMIRPGTLAVRLSANMIAGHLLMTLLGNTGPTLSLFMINFLImaQI 194
Cdd:COG0356   105 GiKKKGLGGYLKHLFFPPFPW-LAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PV 181

                         170       180
                  ....*....|....*....|....
gi 2202543355 195 MLLILESAVAIIQSYVFAVLSTLY 218
Cdd:COG0356   182 AWTAFELLVGFLQAYIFTMLTAVY 205
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 71-218 2.89e-19

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 82.53  E-value: 2.89e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  71 MFVSLFSLILFNNFIGLFP-YIFTSTSHITLTLSLALPLWLSFMIYG-WTNNTINMLAHLVPQgtppaLMPFMVCIETIS 148
Cdd:PRK05815   75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQ-----PHPLLLPIEIIS 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355 149 NMIRPGTLAVRLSANMIAGHLLMTLLGNTGPTLSLFMINFLIMAqIMLLILESAVAIIQSYVFAVLSTLY 218
Cdd:PRK05815  150 EFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 36-218 1.14e-18

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 81.52  E-value: 1.14e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  36 LIPSRLSILWIMIINILHKEFKILLGtnNPKGTTLMFV-SLFSLILFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMI 114
Cdd:MTH00174   59 LVPNRILVGLELIYSHFYTVLKDNLG--NKGGNYLAFVlSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTL 136

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355 115 YGWTNNTINMLAHLVPQGTPPALMPFMVCIETISNMIRPGTLAVRLSANMIAGHLLMTLLG-------NTGPTLSLFmIN 187
Cdd:MTH00174  137 AGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIAsfawkmiNTGILIGSF-VP 215

                         170       180       190
                  ....*....|....*....|....*....|.
gi 2202543355 188 FLIMaqIMLLILESAVAIIQSYVFAVLSTLY 218
Cdd:MTH00174  216 FAIL--IFVTILEMAVAIIQAYVFTLLTIVY 244
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 73-218 4.21e-16

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 75.55  E-value: 4.21e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  73 VSLFSLILFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTIN-MLAHLVpQGTPPALMPFMVCIETISNMI 151
Cdd:PRK13419  175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKAHGIKgYLAHLT-GGTHWSLWIIMIPIEFIGLFT 253

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2202543355 152 RPGTLAVRLSANMIAGHLLMtllgntgptLSLFMINFLIMAQIM-----------LLILESAVAIIQSYVFAVLSTLY 218
Cdd:PRK13419  254 KPFALTVRLFANMTAGHIVI---------LSLIFISFILKSYIVavavsvpfaifIYLLELFVAFLQAYIFTMLSALF 322
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 93-218 1.12e-10

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 60.29  E-value: 1.12e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  93 TSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIETI-SNMIRPGTLAVRLSANMIAGH-LL 170
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHvII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2202543355 171 MTLLGNTGPTLSLFMINFLIMAQIMLLILESAVAIIQSYVFAVLSTLY 218
Cdd:PRK13417  297 LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 72-221 4.14e-09

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 54.21  E-value: 4.14e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  72 FVSLFSLILFNNFIGLFPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNtiNMLAHLVPQGTPPALMPF-MVCIETISNM 150
Cdd:MTH00087   55 SFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKS--EKFSVYLSKGSDSFLKTFsMLFVEIVSEL 132

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2202543355 151 IRPGTLAVRLSANMIAGHLLMTLLgntgptlsLFMINFLIMAQIMLLILESAVAIIQSYVFAVLSTLYSSE 221
Cdd:MTH00087  133 SRPLALTLRLTVNLMVGHLISSLL--------NFLGEKYVWLSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 25-218 1.32e-04

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 41.65  E-value: 1.32e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  25 IGIMVIPPSFWLIPSRLSILWIMIINILHKEFKILLGTNnPKGTTLMFVSLFSLILFNNFIGLFPYIFTSTSHITLTLSL 104
Cdd:PRK13420   32 LASWLTTRRLSLDPGRFQVALEGVVSTIEDAIKEVLPRH-ARLVLPFVGTLWIFILVANLIGLIPGFHSPTADLSVTAAL 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355 105 ALPLWLSFMIYGWTNNTI-NMLAH-LVPQgtpPALMPFMVcietISNMIRPGTLAVRLSANMIAGHLLMTLLgntgptls 182
Cdd:PRK13420  111 ALLVFFSVHWFGIRAEGLrEYLKHyLSPS---PFLLPFHL----ISEITRTLALAVRLFGNIMSLELAALLV-------- 175

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 2202543355 183 LFMINFLimAQIMLLILESAVAIIQSYVFAVLSTLY 218
Cdd:PRK13420  176 LLVAGFL--VPVPILMLHIIEALVQAYIFGMLALIY 209
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 72-176 3.26e-04

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 39.87  E-value: 3.26e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2202543355  72 FVSLFSLILFNNFIGL----FPYIFTSTSHITLTLSLALPLWLSFMIYGWTNNTINMLAHLVPQGTPPALMPFMVCIETI 147
Cdd:MTH00050   22 VSYYYSVVLFIVLFLFllyrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETI 101

                          90       100
                  ....*....|....*....|....*....
gi 2202543355 148 SNMIRPGTLAVRLSANMIAGHLLMTLLGN 176
Cdd:MTH00050  102 SYIIRPVVLILRPFINISLGCFGGVALGN 130
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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