|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15105 |
PRK15105 |
peptidoglycan synthase FtsI; Provisional |
4-572 |
0e+00 |
|
peptidoglycan synthase FtsI; Provisional
Pssm-ID: 185060 [Multi-domain] Cd Length: 578 Bit Score: 686.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 4 KKVVKPSNKKKSTQTAeapTLIAWRFRLILGCVLLIFTALVARIGYIQVIEPDNLIKQGDLRSVRVKALPSARGIISDRN 83
Cdd:PRK15105 1 KAAAKTQKLKRQEEQA---NFISWRFALLCGCILLALVFLLGRVAWLQVINPDMLVREGDMRSLRVQEVSTSRGMITDRS 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 84 GEPLAVSVPVQAVWADPATIFKDNGLAKLDRWHALADVLGLDRQALINKIEKNKTRRFIYLQRQVSPAMAKYIKELKLSG 163
Cdd:PRK15105 78 GRPLAVSVPVKAIWADPKEVHDAGGISVDDRWKALADALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 164 VGLKAESRRYYPAGEVSAHLVGVTGIDGHGLEGVERSYDKWLTGEAGKRIIRKDRYGRVVENISLEEREEGKPLELTIDQ 243
Cdd:PRK15105 158 IHLREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDE 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 244 RLQAIAYRAVKQAVADYRATSGSAVIIDVKTGGVLAMVNAPSYNPNNRSSRQSFTMRNRVITDAMEPGSTVKPFVVLAAL 323
Cdd:PRK15105 238 RLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNLSGTPKDAMRNRAITDVFEPGSTVKPMVVMTAL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 324 EAGVADENTVIDTGNgiMQIGGSRVRDTSKVGKANLAKILQKSSNIGVAKLALEMPLQELLGMYSSIGFGQLSGLNLVGE 403
Cdd:PRK15105 318 QRGVVKENSVLNTVP--YRINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGE 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 404 TTGIFPNRRRWSQFEIATLAFGYGISITPLQLAHAYATLGNGGLYQPVHIIENNQQDLSKQVIDHHYAVEVLHMLEAVTQ 483
Cdd:PRK15105 396 RSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVAL 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 484 PGGTATRAAVPGYRVAAKTGTSRKAAA-GGYSDEYVAITSGVAPVSDPRIALVVVINEPQGDQYYGGAVAGPVFSEIMKG 562
Cdd:PRK15105 476 PGGGGVKAAIKGYRIAIKTGTAKKVGPdGRYINKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGG 555
|
570
....*....|
gi 2252828256 563 SLQILNVAPD 572
Cdd:PRK15105 556 VLRTMNIEPD 565
|
|
| FtsI |
COG0768 |
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ... |
24-568 |
0e+00 |
|
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain] Cd Length: 568 Bit Score: 621.07 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 24 LIAWRFRLILGCVLLIFTALVARIGYIQVIEPDNLIKQGDLRSVRVKALPSARGIISDRNGEPLAVSVPVQAVWADPATI 103
Cdd:COG0768 9 LFRRRLLLLFLLVLLLFLLLVGRLFYLQVVEGDEYAELAEENRIRTVPIPAPRGLIYDRNGNVLATNVPVYSLYADPEEV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 104 fKDnglaKLDRWHALADVLGLDRQALINKIEKNKtRRFIYLQRQVSPAMAKYIKELKLSGVGLKAESRRYYPAGEVSAHL 183
Cdd:COG0768 89 -KD----PEETAEKLAKLLGLDPEELRKKLKKKS-RFPVYLKRNLSPEEAARIRALKLPGVYVEAEYKRYYPYGELAAHV 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 184 VGVTGI----DGHGLEGVERSYDKWLTGEAGKRIIRKDRYGRVVENI-SLEEREEGKPLELTIDQRLQAIAYRAVKQAVA 258
Cdd:COG0768 163 LGYVGEinggDGIGKSGLEKAYEDLLRGTPGKRRVEVDARGRVIRDLgEEKPPVPGKDLVLTIDSDLQKIAEEALKKAVE 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 259 DYRATSGSAVIIDVKTGGVLAMVNAPSYNPNNRSSRQSFTMRNRVITDAMEPGSTVKPFVVLAALEAGVADENTVIDtGN 338
Cdd:COG0768 243 EYKAKSGAVVVMDPKTGEILAMASYPSFDPNLFVGGPDEPLRNRAVQGTYEPGSTFKPFTAAAALEEGVITPDTTFD-CP 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 339 GIMQIGGSRVRDTSKV--GKANLAKILQKSSNIGVAKLALEMPLQELLGMYSSIGFGQLSGLNLVGETTGIFPNRRRWSQ 416
Cdd:COG0768 322 GYYRVGGRTIRDWDRGghGTLTLTEALAKSSNVGFYKLALRLGIDKLYDYLKKFGLGQKTGIDLPGEASGLLPSPKRWYP 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 417 FEIATLAFGYGISITPLQLAHAYATLGNGGLYQPVHIIENNQQD----------LSKQVIDHHYAVEVLHMLEAVTQ-PG 485
Cdd:COG0768 402 GETATMSIGQGLSVTPLQLAQAYAAIANGGVLVKPHLVKEIVDPdgevvkeepeVLRRVISPETAETVREGMEGVVNePG 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 486 GTATRAAVPGYRVAAKTGTSRKA--AAGGYS-DEYVAITSGVAPVSDPRIALVVVINEPQGDqYYGGAVAGPVFSEIMKG 562
Cdd:COG0768 482 GTARRAAIPGYRVAGKTGTAQVVdiGNGGYYkGRHIASFVGFAPADNPRYAVAVVVENPGGG-AYGGTVAAPVFREIMEA 560
|
....*.
gi 2252828256 563 SLQILN 568
Cdd:COG0768 561 YLRLLG 566
|
|
| pbp2_mrdA |
TIGR03423 |
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ... |
28-562 |
7.04e-108 |
|
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain] Cd Length: 592 Bit Score: 335.65 E-value: 7.04e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 28 RFRLILGCVLLIFTALVARIGYIQVIEPDNLIKQGDLRSVRVKALPSARGIISDRNGEPLAVSVPVQAVWADPATIfkDN 107
Cdd:TIGR03423 2 RALVLGGLVLALFGVLAARLFYLQVIRGEEYATLSEDNRIRLVPIPPPRGLILDRNGVLLADNRPSFSLEIVPEKV--DD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 108 GLAKLDRwhaLADVLGLDRQALINKI-EKNKTRRF--IYLQRQVSPAMAKYIKE--LKLSGVGLKAESRRYYPAGEVSAH 182
Cdd:TIGR03423 80 LDATLDR---LAKLLDLDPEDIARFLkELKRSRRFepIPLKSDLTEEEVARFAVnqYRLPGVEIEARLKRYYPYGELAAH 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 183 LVGVTG-IDGHGLE----------------GVERSYDKWLTGEAGKRIIRKDRYGRVVENISLEEREEGKPLELTIDQRL 245
Cdd:TIGR03423 157 VLGYVGeINEEDLErlepanyaggdyigksGIEKYYEDELRGKPGYREVEVNARGRVIRTLSRVPPVPGKDLVLTIDARL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 246 QAIAYRAVKQAvadyratSGSAVIIDVKTGGVLAMVNAPSYNPNNRSSRQSFT------------MRNRVITDAMEPGST 313
Cdd:TIGR03423 237 QQAAEKALGGR-------RGAVVVMDPRTGEILAMVSTPSFDPNLFVDGISSKdykallndpdrpLLNRAIQGVYPPGST 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 314 VKPFVVLAALEAGVADENTVIDTgNGIMQIGGSRVRDTSK--VGKANLAKILQKSSNIGVAKLALEMPLQELLGMYSSIG 391
Cdd:TIGR03423 310 FKPVVALAALEEGVITPETRIYC-PGYFQLGGRRFRCWKRggHGRVDLRKAIEESCDVYFYQLALRLGIDKIAEYAKRFG 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 392 FGQLSGLNLVGETTGIFPNR--------RRWSQFEIATLAFGYG-ISITPLQLAHAYATLGNGG-LYQPvHIIenNQQDL 461
Cdd:TIGR03423 389 FGQKTGIDLPGEKSGLVPSRewkrkrfgQPWYPGDTLNVSIGQGyVLVTPLQLAVATAALANGGkLYKP-HLV--KSIED 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 462 SKQVIDHHYAVEVLH---------------MLEAVTQPGGTATRAAVP-GYRVAAKTGTS---RKAAAGGYSDEYVAITS 522
Cdd:TIGR03423 466 PDGGVVRRTEPEVLRplpispenldvvregMRDVVNGPGGTARRARLGlPYKMAGKTGTAqvvSLKQGEKYDAEQIPERL 545
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 2252828256 523 -------GVAPVSDPRIAlVVVINEPQGdqyYGGAVAGPVFSEIMKG 562
Cdd:TIGR03423 546 rdhalfvAFAPYDNPKIA-VAVIVEHGG---GGSSAAAPIARKIMDA 588
|
|
| Transpeptidase |
pfam00905 |
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ... |
265-561 |
3.68e-82 |
|
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain] Cd Length: 296 Bit Score: 259.27 E-value: 3.68e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 265 GSAVIIDVKTGGVLAMVNAPSYNPNNRSSrqsfTMRNRVITDAMEPGSTVKPFVVLAALEAGVADENTVIDTGNGIMQiG 344
Cdd:pfam00905 1 GSAVVLDPKTGEVLAMVGKPSYDPNGFIG----PLRNRAVTSRYEPGSTFKPFTALAALDNGVLKPDETIFDWPGKQQ-G 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 345 GSRVRD--TSKVGKANLAKILQKSSNIGVAKLALEMPLQELLGMYSSIGFGQLSGLNLVGETTGIFPNrrRWSqfEIATL 422
Cdd:pfam00905 76 GKSIGDwnQDQVGIGTLRQALEYSSNWYMQKLAQKLGADKLRSYLKKFGYGNKTGIGLPGENAGYLTP--YWL--EGATA 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 423 AFGYGISITPLQLAHAYATLGNGGLYQPVHIIEN-----NQQDLSKQVIDHHYAVEVLHMLEAVTQPGGTATRAAVPGYR 497
Cdd:pfam00905 152 SFGIGLTITPLQQAQAYAAIANGGKLVPPHLVKSiedkvDPKVLNKLPISKSTAEKVKDMLRLVVNDGTGTGTAAVPGYK 231
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2252828256 498 VAAKTGTSRKAAA-GGYSDEYVAITS--GVAPVSDPRIALVVVINEPQGdqYYGGAVAGPVFSEIMK 561
Cdd:pfam00905 232 VAGKTGTAQVAGPkGGGYYDGAQIGWfvGYAPADNPKYAFAVLIDDPKR--YYGGKVAAPIFKDILE 296
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15105 |
PRK15105 |
peptidoglycan synthase FtsI; Provisional |
4-572 |
0e+00 |
|
peptidoglycan synthase FtsI; Provisional
Pssm-ID: 185060 [Multi-domain] Cd Length: 578 Bit Score: 686.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 4 KKVVKPSNKKKSTQTAeapTLIAWRFRLILGCVLLIFTALVARIGYIQVIEPDNLIKQGDLRSVRVKALPSARGIISDRN 83
Cdd:PRK15105 1 KAAAKTQKLKRQEEQA---NFISWRFALLCGCILLALVFLLGRVAWLQVINPDMLVREGDMRSLRVQEVSTSRGMITDRS 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 84 GEPLAVSVPVQAVWADPATIFKDNGLAKLDRWHALADVLGLDRQALINKIEKNKTRRFIYLQRQVSPAMAKYIKELKLSG 163
Cdd:PRK15105 78 GRPLAVSVPVKAIWADPKEVHDAGGISVDDRWKALADALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 164 VGLKAESRRYYPAGEVSAHLVGVTGIDGHGLEGVERSYDKWLTGEAGKRIIRKDRYGRVVENISLEEREEGKPLELTIDQ 243
Cdd:PRK15105 158 IHLREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDE 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 244 RLQAIAYRAVKQAVADYRATSGSAVIIDVKTGGVLAMVNAPSYNPNNRSSRQSFTMRNRVITDAMEPGSTVKPFVVLAAL 323
Cdd:PRK15105 238 RLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNLSGTPKDAMRNRAITDVFEPGSTVKPMVVMTAL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 324 EAGVADENTVIDTGNgiMQIGGSRVRDTSKVGKANLAKILQKSSNIGVAKLALEMPLQELLGMYSSIGFGQLSGLNLVGE 403
Cdd:PRK15105 318 QRGVVKENSVLNTVP--YRINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGE 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 404 TTGIFPNRRRWSQFEIATLAFGYGISITPLQLAHAYATLGNGGLYQPVHIIENNQQDLSKQVIDHHYAVEVLHMLEAVTQ 483
Cdd:PRK15105 396 RSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVAL 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 484 PGGTATRAAVPGYRVAAKTGTSRKAAA-GGYSDEYVAITSGVAPVSDPRIALVVVINEPQGDQYYGGAVAGPVFSEIMKG 562
Cdd:PRK15105 476 PGGGGVKAAIKGYRIAIKTGTAKKVGPdGRYINKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGG 555
|
570
....*....|
gi 2252828256 563 SLQILNVAPD 572
Cdd:PRK15105 556 VLRTMNIEPD 565
|
|
| FtsI |
COG0768 |
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ... |
24-568 |
0e+00 |
|
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain] Cd Length: 568 Bit Score: 621.07 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 24 LIAWRFRLILGCVLLIFTALVARIGYIQVIEPDNLIKQGDLRSVRVKALPSARGIISDRNGEPLAVSVPVQAVWADPATI 103
Cdd:COG0768 9 LFRRRLLLLFLLVLLLFLLLVGRLFYLQVVEGDEYAELAEENRIRTVPIPAPRGLIYDRNGNVLATNVPVYSLYADPEEV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 104 fKDnglaKLDRWHALADVLGLDRQALINKIEKNKtRRFIYLQRQVSPAMAKYIKELKLSGVGLKAESRRYYPAGEVSAHL 183
Cdd:COG0768 89 -KD----PEETAEKLAKLLGLDPEELRKKLKKKS-RFPVYLKRNLSPEEAARIRALKLPGVYVEAEYKRYYPYGELAAHV 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 184 VGVTGI----DGHGLEGVERSYDKWLTGEAGKRIIRKDRYGRVVENI-SLEEREEGKPLELTIDQRLQAIAYRAVKQAVA 258
Cdd:COG0768 163 LGYVGEinggDGIGKSGLEKAYEDLLRGTPGKRRVEVDARGRVIRDLgEEKPPVPGKDLVLTIDSDLQKIAEEALKKAVE 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 259 DYRATSGSAVIIDVKTGGVLAMVNAPSYNPNNRSSRQSFTMRNRVITDAMEPGSTVKPFVVLAALEAGVADENTVIDtGN 338
Cdd:COG0768 243 EYKAKSGAVVVMDPKTGEILAMASYPSFDPNLFVGGPDEPLRNRAVQGTYEPGSTFKPFTAAAALEEGVITPDTTFD-CP 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 339 GIMQIGGSRVRDTSKV--GKANLAKILQKSSNIGVAKLALEMPLQELLGMYSSIGFGQLSGLNLVGETTGIFPNRRRWSQ 416
Cdd:COG0768 322 GYYRVGGRTIRDWDRGghGTLTLTEALAKSSNVGFYKLALRLGIDKLYDYLKKFGLGQKTGIDLPGEASGLLPSPKRWYP 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 417 FEIATLAFGYGISITPLQLAHAYATLGNGGLYQPVHIIENNQQD----------LSKQVIDHHYAVEVLHMLEAVTQ-PG 485
Cdd:COG0768 402 GETATMSIGQGLSVTPLQLAQAYAAIANGGVLVKPHLVKEIVDPdgevvkeepeVLRRVISPETAETVREGMEGVVNePG 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 486 GTATRAAVPGYRVAAKTGTSRKA--AAGGYS-DEYVAITSGVAPVSDPRIALVVVINEPQGDqYYGGAVAGPVFSEIMKG 562
Cdd:COG0768 482 GTARRAAIPGYRVAGKTGTAQVVdiGNGGYYkGRHIASFVGFAPADNPRYAVAVVVENPGGG-AYGGTVAAPVFREIMEA 560
|
....*.
gi 2252828256 563 SLQILN 568
Cdd:COG0768 561 YLRLLG 566
|
|
| pbp2_mrdA |
TIGR03423 |
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ... |
28-562 |
7.04e-108 |
|
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain] Cd Length: 592 Bit Score: 335.65 E-value: 7.04e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 28 RFRLILGCVLLIFTALVARIGYIQVIEPDNLIKQGDLRSVRVKALPSARGIISDRNGEPLAVSVPVQAVWADPATIfkDN 107
Cdd:TIGR03423 2 RALVLGGLVLALFGVLAARLFYLQVIRGEEYATLSEDNRIRLVPIPPPRGLILDRNGVLLADNRPSFSLEIVPEKV--DD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 108 GLAKLDRwhaLADVLGLDRQALINKI-EKNKTRRF--IYLQRQVSPAMAKYIKE--LKLSGVGLKAESRRYYPAGEVSAH 182
Cdd:TIGR03423 80 LDATLDR---LAKLLDLDPEDIARFLkELKRSRRFepIPLKSDLTEEEVARFAVnqYRLPGVEIEARLKRYYPYGELAAH 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 183 LVGVTG-IDGHGLE----------------GVERSYDKWLTGEAGKRIIRKDRYGRVVENISLEEREEGKPLELTIDQRL 245
Cdd:TIGR03423 157 VLGYVGeINEEDLErlepanyaggdyigksGIEKYYEDELRGKPGYREVEVNARGRVIRTLSRVPPVPGKDLVLTIDARL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 246 QAIAYRAVKQAvadyratSGSAVIIDVKTGGVLAMVNAPSYNPNNRSSRQSFT------------MRNRVITDAMEPGST 313
Cdd:TIGR03423 237 QQAAEKALGGR-------RGAVVVMDPRTGEILAMVSTPSFDPNLFVDGISSKdykallndpdrpLLNRAIQGVYPPGST 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 314 VKPFVVLAALEAGVADENTVIDTgNGIMQIGGSRVRDTSK--VGKANLAKILQKSSNIGVAKLALEMPLQELLGMYSSIG 391
Cdd:TIGR03423 310 FKPVVALAALEEGVITPETRIYC-PGYFQLGGRRFRCWKRggHGRVDLRKAIEESCDVYFYQLALRLGIDKIAEYAKRFG 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 392 FGQLSGLNLVGETTGIFPNR--------RRWSQFEIATLAFGYG-ISITPLQLAHAYATLGNGG-LYQPvHIIenNQQDL 461
Cdd:TIGR03423 389 FGQKTGIDLPGEKSGLVPSRewkrkrfgQPWYPGDTLNVSIGQGyVLVTPLQLAVATAALANGGkLYKP-HLV--KSIED 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 462 SKQVIDHHYAVEVLH---------------MLEAVTQPGGTATRAAVP-GYRVAAKTGTS---RKAAAGGYSDEYVAITS 522
Cdd:TIGR03423 466 PDGGVVRRTEPEVLRplpispenldvvregMRDVVNGPGGTARRARLGlPYKMAGKTGTAqvvSLKQGEKYDAEQIPERL 545
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 2252828256 523 -------GVAPVSDPRIAlVVVINEPQGdqyYGGAVAGPVFSEIMKG 562
Cdd:TIGR03423 546 rdhalfvAFAPYDNPKIA-VAVIVEHGG---GGSSAAAPIARKIMDA 588
|
|
| Transpeptidase |
pfam00905 |
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ... |
265-561 |
3.68e-82 |
|
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain] Cd Length: 296 Bit Score: 259.27 E-value: 3.68e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 265 GSAVIIDVKTGGVLAMVNAPSYNPNNRSSrqsfTMRNRVITDAMEPGSTVKPFVVLAALEAGVADENTVIDTGNGIMQiG 344
Cdd:pfam00905 1 GSAVVLDPKTGEVLAMVGKPSYDPNGFIG----PLRNRAVTSRYEPGSTFKPFTALAALDNGVLKPDETIFDWPGKQQ-G 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 345 GSRVRD--TSKVGKANLAKILQKSSNIGVAKLALEMPLQELLGMYSSIGFGQLSGLNLVGETTGIFPNrrRWSqfEIATL 422
Cdd:pfam00905 76 GKSIGDwnQDQVGIGTLRQALEYSSNWYMQKLAQKLGADKLRSYLKKFGYGNKTGIGLPGENAGYLTP--YWL--EGATA 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 423 AFGYGISITPLQLAHAYATLGNGGLYQPVHIIEN-----NQQDLSKQVIDHHYAVEVLHMLEAVTQPGGTATRAAVPGYR 497
Cdd:pfam00905 152 SFGIGLTITPLQQAQAYAAIANGGKLVPPHLVKSiedkvDPKVLNKLPISKSTAEKVKDMLRLVVNDGTGTGTAAVPGYK 231
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2252828256 498 VAAKTGTSRKAAA-GGYSDEYVAITS--GVAPVSDPRIALVVVINEPQGdqYYGGAVAGPVFSEIMK 561
Cdd:pfam00905 232 VAGKTGTAQVAGPkGGGYYDGAQIGWfvGYAPADNPKYAFAVLIDDPKR--YYGGKVAAPIFKDILE 296
|
|
| PRK10795 |
PRK10795 |
penicillin-binding protein 2; Provisional |
36-568 |
5.98e-54 |
|
penicillin-binding protein 2; Provisional
Pssm-ID: 236761 [Multi-domain] Cd Length: 634 Bit Score: 193.83 E-value: 5.98e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 36 VLLIFTALVARIGYIQVIEPDNLIKQGDLRSVRVKALPSARGIISDRNGEPLAVSVPVQAVWADPATIfkDNGLAKLDrw 115
Cdd:PRK10795 29 ILLLTGVLIANLYNLQIVRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGTPLALNRTIYQLEMMPEKV--DNLQQTLD-- 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 116 hALADVLGLDRQALIN-KIEKNKTRRFIYLQRQVS---PAMAKY-IKELKLSGVGLKAESRRYYPAGEVSAHLVG-VTGI 189
Cdd:PRK10795 105 -ALRSVVDLTDDDIAAfRKERARSRRFTSIPVKTNlteVQVARFaVNQYRFPGVEVKGYQRRYYPYGSALTHVIGyVSKI 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 190 DGHGLE--------------------GVERSYDKWLTGEAGKRIIRKDRYGRVVENISLEEREEGKPLELTIDQRLQaia 249
Cdd:PRK10795 184 NDKDVErldkegklanyaathdigklGIERYYEDVLHGKTGYEEVEVNNRGRVIRQLHEQPPQAGHDIYLTLDLKLQ--- 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 250 yRAVKQAVADYRAtsgSAVIIDVKTGGVLAMVNAPSYNPN----NRSSRQ--------SFTMRNRVITDAMEPGSTVKPF 317
Cdd:PRK10795 261 -QYIETLLAGSRA---AVVVTDPRTGGILALVSTPSYDPNlfvdGISSKDysgllndpNRPLINRATQGVYPPASTVKPY 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 318 VVLAALEAGVADENTVI-DTgnGIMQIGGS--RVRDTSKV--GKANLAKILQKSSNIGVAKLALEMPLQELLGMYSSIGF 392
Cdd:PRK10795 337 VAVSALSAGVITRNTSLfDP--GWWQLPGSekRYRDWKKWghGRLNVTKSLEESADTFFYQVAYDMGIDRLSEWMGKFGY 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 393 GQLSGLNLVGETTGIFPNR----RR----WSQFEIATLAFGYGI-SITPLQLAHAYATLGNGGLYQPVHII----ENN-- 457
Cdd:PRK10795 415 GHYTGIDLAEERSGNMPTRewkqKRfkkpWYQGDTIPVGIGQGYwTATPIQMSKALMTLINDGIVKVPHLLmstaEDGkq 494
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 458 ---QQDLSKQVIDHH---YAVEVLHMLEAVTQPGGTATR--AAVPgYRVAAKTGTSR---KAAAGGYSDEYVA------- 519
Cdd:PRK10795 495 vpwVQPHEPPVGDIHsgyWEIAKDGMYGVANRPNGTAHKyfASAP-YKIAAKSGTAQvfgLKANETYNAHKIAerlrdhk 573
|
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 2252828256 520 ITSGVAPVSDPRIALVVVINEpqgdqyyGGavAGPVFSEIMKgslQILN 568
Cdd:PRK10795 574 LMTAFAPYNNPQVAVAIILEN-------GG--AGPAVGTIMR---QILD 610
|
|
| MrcB |
COG0744 |
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall ... |
240-571 |
2.98e-41 |
|
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440507 [Multi-domain] Cd Length: 630 Bit Score: 157.77 E-value: 2.98e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 240 TIDQRLQAIAYRAVKQAVAD--YRATSGSAVIIDVKTGGVLAMVNAPSYNpnnrssrqsFTMRNRVITDAMEPGSTVKPF 317
Cdd:COG0744 300 TLDPKLQKAAEKAVKNVLPEgkPGGLQAALVVVDPKTGEVLAMVGGRDYG---------KSQFNRATQAKRQPGSTFKPF 370
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 318 VVLAALEAGVaDENTVIDTGNGIMQIGGSRVRDTSKV--GKANLAKILQKSSNIGVAKLALEMPLQELLGMYSSIGFgql 395
Cdd:COG0744 371 VYAAALEQGY-TPATTVDDEPVTFPGGGWSPKNYDGRyrGPVTLREALANSLNTPAVRLAQEVGLDKVVDTARRLGI--- 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 396 sglnlvgeTTGIFPNrrrwsqfeiATLAFGyGISITPLQLAHAYATLGNGGLYQPVHIIE----------NNQQDLSKQV 465
Cdd:COG0744 447 --------TSPLDPN---------PSLALG-TSEVSPLEMASAYATFANGGVYVEPHAITkvtdadgkvlYEAKPKCEQV 508
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 466 IDHHYAVEVLHMLEAVTQpGGTATRAAVPGYRVAAKTGTS---RKAAAGGYSDEYVAitsGVApVSDPRialvvviNEPQ 542
Cdd:COG0744 509 ISPEVAYLMTDMLQDVVT-SGTGRAARLPGRPVAGKTGTTndnRDAWFVGYTPQLVT---AVW-VGNDD-------NSPM 576
|
330 340
....*....|....*....|....*....
gi 2252828256 543 GDQyYGGAVAGPVFSEIMKGSLQILNVAP 571
Cdd:COG0744 577 GYV-TGGSLPAPIWRDFMEAALEGLPVED 604
|
|
| PBP_1a_fam |
TIGR02074 |
penicillin-binding protein, 1A family; Bacterial that synthesize a cell wall of peptidoglycan ... |
221-561 |
6.21e-34 |
|
penicillin-binding protein, 1A family; Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273955 [Multi-domain] Cd Length: 531 Bit Score: 135.46 E-value: 6.21e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 221 RVVENISLEEREEGKPLELTIDQRLQAIAYRAVKQAVADYRATSG-----SAVIIDVKTGGVLAMVNAPSYNPNNrssrq 295
Cdd:TIGR02074 208 ELEEEYGEELYTGGLKIYTTLDLDAQKAAEKVLNTGLRVAGRRDGddlqaALVAIDPDTGAVRALVGGRDYGKSQ----- 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 296 sFtmrNRViTDAM-EPGSTVKPFVVLAALEAGVADENTVID-----TGNGIMQIGGSrvrDTSKVGKANLAKILQKSSNI 369
Cdd:TIGR02074 283 -F---NRA-TQAKrQPGSTFKPFVYAAALEKGLTPATIVNDepityNGNGPWSPKNY---GGGYRGNVTLRQALAQSRNI 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 370 GVAKLALEMplqellgmyssigfgqlsGLNLVGETT---GIFPNRRRwsqfeIATLAFGyGISITPLQLAHAYATLGNGG 446
Cdd:TIGR02074 355 PAVRLLQEV------------------GLDKVVALAkrfGITSPLDP-----VLSLALG-TVEVSPLEMASAYAVFANGG 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 447 LYQPVHIIE-----------NNQQDlSKQVIDHHYAVEVLHMLEAVTQpGGTATRAAVPGYRVAAKTGTS---RKAAAGG 512
Cdd:TIGR02074 411 KYVEPHGIRkivdrdgkviyENKPK-TTQVISPATAYIMTDMLKGVVE-SGTGRSARLPGRPVAGKTGTTqnwRDAWFVG 488
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2252828256 513 YSDEYVAItsgvapvsdprialVVV---INEPQGDQYYGGAVAGPVFSEIMK 561
Cdd:TIGR02074 489 YTPYYVTA--------------VWVgydDKKTLGKSGTGGGLAAPIWRDFMA 526
|
|
| PbpC |
COG4953 |
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope ... |
230-518 |
6.83e-25 |
|
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443980 [Multi-domain] Cd Length: 773 Bit Score: 109.54 E-value: 6.83e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 230 EREEGKPLELTIDQRLQAIAYRAVKQAVADYRA---TSGSAVIIDVKTGGVLAMVNAPSYNPNNRSSRQSFTMRNRvitd 306
Cdd:COG4953 267 QLPGGTRIRTTLDAGLQRRLERLVRRYVRRLKQngiHNAAVLVVDNRTGEVLAYVGSADFFDASRQGQVDMVRALR---- 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 307 amEPGSTVKPFVVLAALEAGVADENTVI-DTGngiMQIGGSRVR--DTSKVGKANLAKILQKSSNIGVAKLALEMPLQEL 383
Cdd:COG4953 343 --SPGSTLKPFLYGLALDQGLIHPETLLaDVP---TSFGGYRPEnfDGTFQGPVSAREALARSLNIPAVRLLEALGPARF 417
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 384 LGMYSSIGFGQL----SGLNLvgettgifpnrrrwsqfeiaTLAFGyGISITPLQLAHAYATLGNGGLYQPVHIIENNQQ 459
Cdd:COG4953 418 YARLRRAGLRLLlppaEHYGL--------------------SLILG-GAEVTLEELVGLYAALARGGEARPLRLLAGEPA 476
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2252828256 460 DLSKQVIDHHYAVEVLHMLEAVTQPGGT-ATRAAVPGYRVAAKTGTS---RKAAAGGYSDEYV 518
Cdd:COG4953 477 SPGRRLLSPGAAWLVRDILSDVPRPDGAfGWRALDSPPPIAWKTGTSygfRDAWAVGFTGRYT 539
|
|
| PBP_dimer |
pfam03717 |
Penicillin-binding Protein dimerization domain; This domain is found at the N terminus of ... |
71-225 |
2.79e-24 |
|
Penicillin-binding Protein dimerization domain; This domain is found at the N terminus of Class B High Molecular Weight Penicillin-Binding Proteins. Its function has not been precisely defined, but is strongly implicated in PBP polymerization. The domain forms a largely disordered 'sugar tongs' structure.
Pssm-ID: 427460 [Multi-domain] Cd Length: 178 Bit Score: 99.70 E-value: 2.79e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 71 ALPSARGIISDRNGEPLAVSVPVQAVWADPATIFKDNGLAKLDRwhaLADVLGLDRQALINKIEKN-------KTRRFIY 143
Cdd:pfam03717 1 PIPAPRGEIYDRNGVVLATNKPVYSLTITPSKLKKADALKTALK---LAKLLSNYEDLDDEDLTERflkmnsyKSYYPVV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 144 LQRQVSPAMAKYIKE--LKLSGVGLKAESRRYYPAGEVSAHLVG-VTGIDGHGLE----------------GVERSYDKW 204
Cdd:pfam03717 78 IKKNLSEEEVARIEEnlLELPGVSIETDPVRYYPYGELAAHLLGyVGEITEEELEkyldkgysrgdlvgksGLEKQYESV 157
|
170 180
....*....|....*....|.
gi 2252828256 205 LTGEAGKRIIRKDRYGRVVEN 225
Cdd:pfam03717 158 LRGKDGVRQVEVDALGRVIRE 178
|
|
| PBP_1c |
TIGR02073 |
penicillin-binding protein 1C; This subfamily of the penicillin binding proteins includes the ... |
222-559 |
1.17e-20 |
|
penicillin-binding protein 1C; This subfamily of the penicillin binding proteins includes the member from E. coli designated penicillin-binding protein 1C. Members have both transglycosylase and transpeptidase domains and are involved in forming cross-links in the late stages of peptidoglycan biosynthesis. All members of this subfamily are presumed to have the same basic function. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273954 [Multi-domain] Cd Length: 727 Bit Score: 96.34 E-value: 1.17e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 222 VVENISLEEREEGKPLELTIDQRLQAIAYRAVKQAVADYRA---TSGSAVIIDVKTGGVLAMVNAPSYNPNNRSSRQSFT 298
Cdd:TIGR02073 229 FALKLLRARPEIASVIVSTLDADLQRRLEELARRYLSALRPrgiSNLAILVVDNRSGAVLAYVGSADFFDDSNSGQVDGV 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 299 MRNRvitdamEPGSTVKPFVVLAALEAGVADENTVIDtgNGIMQIGGSRVRDTSKV--GKANLAKILQKSSNIGVAKLAl 376
Cdd:TIGR02073 309 RAPR------SPGSTLKPFLYALALDDGLLHPDSLLK--DVPLRFGDYAPENFDKTfhGPVPAREALARSLNIPAVRLL- 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 377 emplqELLGMYSSIGFGQLSGLNLvgettgifpnRRRWSQFEIATLAFGyGISITPLQLAHAYATLGNGGLYQPVHIIEN 456
Cdd:TIGR02073 380 -----ERVGPPRFADFLRQAGLNL----------LKPKSDYYGLSLALG-GAEITLQDLANLYAMLANQGLSGPLRFLQT 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 457 NQ-QDLSKQVIDHHYAVEVLHMLEAVTQPGGTATRAAVP-GYRVAAKTGTS---RKAAAGGYSDEYVAitsgVAPVSDPR 531
Cdd:TIGR02073 444 DAkRPERERLLSPGAAWIVLDILKDRPRPDDTLPLSALPtRLPLAWKTGTSygfRDAWAAGVSGRYTI----GVWVGNFD 519
|
330 340
....*....|....*....|....*...
gi 2252828256 532 ialvvviNEPQGDQyYGGAVAGPVFSEI 559
Cdd:TIGR02073 520 -------GKPNPGF-FGAAAAAPLLFDI 539
|
|
| MrcA |
COG5009 |
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis]; |
264-565 |
1.98e-19 |
|
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 444033 [Multi-domain] Cd Length: 785 Bit Score: 92.53 E-value: 1.98e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 264 SGSAVIIDVKTGGVLAMVNApsynpnnRSSRQS-FtmrNRViTDAM-EPGSTVKPFVVLAALEAG------VADENTVID 335
Cdd:COG5009 422 QGALVALDPHTGAVLALVGG-------FDFEQSkF---NRA-TQAKrQPGSSFKPFVYAAALDNGytpatiINDAPIVFD 490
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 336 TGNGimqiGGS-RVRDTSKV--GKANLAKILQKSSNIGVAKLALEMPLQELLGMYSSIGFGQLSGLNLvgettgifpnrr 412
Cdd:COG5009 491 DGGG----GGVwRPKNYSGKfyGPTTLREALEKSRNLVTVRLLQDVGIDYVIDYAERFGIYSKLPPNL------------ 554
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 413 rwsqfeiaTLAFGYGiSITPLQLAHAYATLGNGGLY-QPVHI--IENNQ----------------------------QDL 461
Cdd:COG5009 555 --------SLALGSG-EVTPLEMARAYAVFANGGYRvEPYLIdrIEDRNgkviyradparacedcdaaewdgaeprlPDP 625
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 462 SKQVIDHHYAVEVLHMLEAVTQpGGTATRAAVPGYRVAAKTGT---SRKAAAGGYSDEYVAItsgvapV----SDPRial 534
Cdd:COG5009 626 AEQVIDPRTAYQMTSMLRGVVQ-RGTGRRARALGRDIAGKTGTtndSKDAWFVGFTPDLVAG------VwvgfDDPR--- 695
|
330 340 350
....*....|....*....|....*....|.
gi 2252828256 535 vvvinePQGDQYYGGAVAGPVFSEIMKGSLQ 565
Cdd:COG5009 696 ------SLGRGETGGRAALPIWIDFMKAALK 720
|
|
| PRK14850 |
PRK14850 |
penicillin-binding protein 1b; Provisional |
240-505 |
1.07e-07 |
|
penicillin-binding protein 1b; Provisional
Pssm-ID: 237835 [Multi-domain] Cd Length: 764 Bit Score: 54.85 E-value: 1.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 240 TIDQRLQAIAYRAVKQAVA------DYRATSGSAVIIDVKTGGVLAMVNapSYNPNnrssrqsFTMRNRVITDAMEPGST 313
Cdd:PRK14850 385 TLDYISQNAAEQAVKIGIPilkrkkRLKDLEVAMVIIDRFSGEVRALIG--SSKPE-------FNGYNRALKARRSIGSL 455
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 314 VKPFVVLAALE--------AGVADENTVIDTGNGimQIGGSRVRDTSKVGKANLAKILQKSSNIGVAKLALEMPLQELLG 385
Cdd:PRK14850 456 SKPITYLTALSqpekyhlnTWISDTPISIKLDNG--QYWTPKNNNFSFSGKVMLIDALIHSINIPTVHLSINLGLKKLVD 533
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2252828256 386 MYSSIGFgqlsglnlvgETTGIFPnrrrwsqfeIATLAFGyGISITPLQLAHAYATLGNGGLYQPV----HIIENNQQDL 461
Cdd:PRK14850 534 SWILLGI----------SSNYITP---------LPSISLG-AINLTPMEVAQVFQIIGSGGYKSSLssirSIISDDNKVL 593
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2252828256 462 ------SKQVIDHHYAVEVLHMLEAVTQPGGTATRAAV-PGYRVAAKTGTS 505
Cdd:PRK14850 594 yqnfpqSKHVESSQASYLTLYAMQQVVKSGTAKSLGTIfKEFSLAGKTGTT 644
|
|
| |
